Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1327780 | XP_003628698.1 | 89.655 | 290 | 20 | 1 | 1 | 280 | 1 | 290 | 0.0 | 528 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1327780 | sp|Q9FNN6|SRM1_ARATH | 46.535 | 303 | 123 | 7 | 1 | 276 | 3 | 293 | 9.30e-75 | 233 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1327780 | G7I733 | 89.655 | 290 | 20 | 1 | 1 | 280 | 1 | 290 | 0.0 | 528 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1327780 | TF | MYB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1327780 | MtrunA17_Chr8g0364731 | 95.000 | 180 | 9 | 0 | 101 | 280 | 6 | 185 | 8.22e-124 | 350 |
| Msa1327780 | MtrunA17_Chr8g0365011 | 58.361 | 305 | 80 | 7 | 1 | 279 | 1 | 284 | 1.32e-107 | 313 |
| Msa1327780 | MtrunA17_Chr1g0162081 | 55.667 | 300 | 97 | 5 | 1 | 275 | 3 | 291 | 2.12e-102 | 300 |
| Msa1327780 | MtrunA17_Chr8g0364741 | 92.708 | 96 | 7 | 0 | 1 | 96 | 1 | 96 | 4.34e-61 | 189 |
| Msa1327780 | MtrunA17_Chr4g0062741 | 41.696 | 283 | 98 | 10 | 10 | 239 | 8 | 276 | 1.23e-52 | 174 |
| Msa1327780 | MtrunA17_Chr1g0210471 | 49.180 | 183 | 71 | 3 | 8 | 173 | 22 | 199 | 4.44e-45 | 152 |
| Msa1327780 | MtrunA17_Chr5g0436501 | 43.169 | 183 | 92 | 2 | 3 | 173 | 20 | 202 | 3.45e-39 | 138 |
| Msa1327780 | MtrunA17_Chr3g0104071 | 41.489 | 188 | 90 | 3 | 2 | 171 | 35 | 220 | 1.02e-38 | 138 |
| Msa1327780 | MtrunA17_Chr5g0429521 | 38.235 | 204 | 102 | 5 | 2 | 188 | 23 | 219 | 6.41e-38 | 135 |
| Msa1327780 | MtrunA17_Chr7g0241761 | 40.761 | 184 | 88 | 4 | 9 | 173 | 34 | 215 | 1.95e-36 | 132 |
| Msa1327780 | MtrunA17_Chr5g0432921 | 39.024 | 164 | 90 | 7 | 5 | 160 | 16 | 177 | 6.24e-24 | 96.7 |
| Msa1327780 | MtrunA17_Chr5g0432941 | 38.037 | 163 | 92 | 7 | 5 | 160 | 17 | 177 | 1.41e-22 | 93.2 |
| Msa1327780 | MtrunA17_Chr1g0155181 | 56.522 | 69 | 30 | 0 | 4 | 72 | 1 | 69 | 1.18e-21 | 86.7 |
| Msa1327780 | MtrunA17_Chr3g0144631 | 52.308 | 65 | 31 | 0 | 10 | 74 | 16 | 80 | 7.13e-20 | 81.6 |
| Msa1327780 | MtrunA17_Chr3g0141601 | 53.623 | 69 | 32 | 0 | 4 | 72 | 1 | 69 | 2.68e-19 | 80.5 |
| Msa1327780 | MtrunA17_Chr5g0440741 | 56.522 | 69 | 29 | 1 | 103 | 170 | 107 | 175 | 1.02e-18 | 84.0 |
| Msa1327780 | MtrunA17_Chr5g0440731 | 56.522 | 69 | 29 | 1 | 103 | 170 | 112 | 180 | 1.29e-18 | 83.6 |
| Msa1327780 | MtrunA17_Chr5g0409841 | 37.931 | 116 | 61 | 2 | 90 | 204 | 85 | 190 | 1.88e-17 | 79.3 |
| Msa1327780 | MtrunA17_Chr5g0404101 | 52.941 | 68 | 32 | 0 | 5 | 72 | 14 | 81 | 1.96e-17 | 75.9 |
| Msa1327780 | MtrunA17_Chr7g0255841 | 52.174 | 69 | 33 | 0 | 14 | 82 | 16 | 84 | 3.04e-17 | 75.1 |
| Msa1327780 | MtrunA17_Chr6g0449111 | 50.000 | 72 | 36 | 0 | 1 | 72 | 1 | 72 | 4.92e-16 | 71.6 |
| Msa1327780 | MtrunA17_Chr3g0081631 | 49.315 | 73 | 36 | 1 | 1 | 72 | 1 | 73 | 2.59e-15 | 70.1 |
| Msa1327780 | MtrunA17_Chr2g0331031 | 61.667 | 60 | 21 | 1 | 103 | 162 | 116 | 173 | 4.25e-15 | 74.3 |
| Msa1327780 | MtrunA17_Chr6g0488471 | 50.549 | 91 | 36 | 3 | 103 | 193 | 104 | 185 | 4.26e-15 | 73.9 |
| Msa1327780 | MtrunA17_Chr4g0055931 | 58.333 | 60 | 23 | 1 | 103 | 162 | 102 | 159 | 5.29e-15 | 73.9 |
| Msa1327780 | MtrunA17_Chr5g0409831 | 39.167 | 120 | 62 | 4 | 90 | 207 | 70 | 180 | 5.02e-14 | 69.7 |
| Msa1327780 | MtrunA17_Chr8g0389241 | 57.627 | 59 | 22 | 1 | 104 | 162 | 113 | 168 | 1.66e-13 | 68.9 |
| Msa1327780 | MtrunA17_Chr8g0373131 | 40.000 | 70 | 41 | 1 | 10 | 79 | 5 | 73 | 1.31e-12 | 62.0 |
| Msa1327780 | MtrunA17_Chr8g0373111 | 40.580 | 69 | 40 | 1 | 10 | 78 | 5 | 72 | 1.41e-12 | 62.0 |
| Msa1327780 | MtrunA17_Chr8g0373121 | 40.580 | 69 | 40 | 1 | 10 | 78 | 5 | 72 | 1.41e-12 | 62.0 |
| Msa1327780 | MtrunA17_Chr3g0141641 | 41.270 | 63 | 37 | 0 | 10 | 72 | 3 | 65 | 2.14e-12 | 62.0 |
| Msa1327780 | MtrunA17_Chr5g0404301 | 47.541 | 61 | 31 | 1 | 10 | 70 | 4 | 63 | 4.73e-12 | 60.1 |
| Msa1327780 | MtrunA17_Chr8g0373101 | 43.284 | 67 | 35 | 2 | 4 | 70 | 1 | 64 | 2.16e-11 | 58.5 |
| Msa1327780 | MtrunA17_Chr3g0092621 | 52.459 | 61 | 27 | 1 | 103 | 163 | 91 | 149 | 4.18e-11 | 60.5 |
| Msa1327780 | MtrunA17_Chr3g0135671 | 50.769 | 65 | 31 | 1 | 105 | 168 | 100 | 164 | 6.69e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1327780 | AT5G08520.1 | 46.535 | 303 | 123 | 7 | 1 | 276 | 3 | 293 | 9.46e-76 | 233 |
| Msa1327780 | AT5G23650.1 | 35.152 | 330 | 146 | 5 | 3 | 266 | 6 | 333 | 3.99e-51 | 171 |
| Msa1327780 | AT1G49010.1 | 37.589 | 282 | 116 | 9 | 10 | 244 | 8 | 276 | 1.28e-39 | 140 |
| Msa1327780 | AT5G04760.1 | 47.619 | 168 | 77 | 3 | 6 | 165 | 2 | 166 | 1.81e-39 | 137 |
| Msa1327780 | AT5G58900.1 | 41.758 | 182 | 83 | 4 | 5 | 165 | 29 | 208 | 3.50e-38 | 136 |
| Msa1327780 | AT2G38090.1 | 41.848 | 184 | 79 | 4 | 8 | 165 | 27 | 208 | 5.72e-37 | 133 |
| Msa1327780 | AT5G05790.2 | 42.077 | 183 | 88 | 4 | 7 | 173 | 28 | 208 | 2.44e-35 | 128 |
| Msa1327780 | AT5G05790.1 | 42.077 | 183 | 88 | 4 | 7 | 173 | 28 | 208 | 2.44e-35 | 128 |
| Msa1327780 | AT3G11280.2 | 43.210 | 162 | 82 | 3 | 10 | 163 | 33 | 192 | 2.52e-34 | 125 |
| Msa1327780 | AT3G11280.1 | 43.210 | 162 | 82 | 3 | 10 | 163 | 33 | 192 | 2.52e-34 | 125 |
| Msa1327780 | AT3G10580.2 | 43.195 | 169 | 83 | 6 | 10 | 173 | 8 | 168 | 6.07e-30 | 114 |
| Msa1327780 | AT3G10580.1 | 43.195 | 169 | 83 | 6 | 10 | 173 | 8 | 168 | 8.34e-30 | 114 |
| Msa1327780 | AT5G01200.1 | 38.710 | 186 | 82 | 6 | 10 | 165 | 30 | 213 | 5.08e-29 | 111 |
| Msa1327780 | AT4G09450.1 | 42.331 | 163 | 86 | 4 | 4 | 164 | 1 | 157 | 1.14e-27 | 106 |
| Msa1327780 | AT4G39250.1 | 53.846 | 65 | 30 | 0 | 10 | 74 | 14 | 78 | 1.30e-19 | 82.0 |
| Msa1327780 | AT1G75250.2 | 51.429 | 70 | 34 | 0 | 10 | 79 | 12 | 81 | 3.96e-19 | 80.9 |
| Msa1327780 | AT1G75250.1 | 51.429 | 70 | 34 | 0 | 10 | 79 | 12 | 81 | 1.92e-18 | 79.7 |
| Msa1327780 | AT2G21650.1 | 50.000 | 72 | 36 | 0 | 10 | 81 | 14 | 85 | 2.16e-16 | 73.6 |
| Msa1327780 | AT5G47390.1 | 58.824 | 68 | 26 | 1 | 103 | 170 | 103 | 168 | 5.44e-16 | 77.4 |
| Msa1327780 | AT2G18328.1 | 55.932 | 59 | 26 | 0 | 14 | 72 | 15 | 73 | 3.24e-15 | 69.7 |
| Msa1327780 | AT3G10590.1 | 32.086 | 187 | 90 | 8 | 4 | 164 | 1 | 176 | 2.17e-14 | 70.9 |
| Msa1327780 | AT1G19510.1 | 46.377 | 69 | 37 | 0 | 14 | 82 | 16 | 84 | 2.44e-14 | 67.8 |
| Msa1327780 | AT5G56840.1 | 56.923 | 65 | 27 | 1 | 103 | 167 | 98 | 161 | 3.46e-14 | 70.9 |
| Msa1327780 | AT5G61620.1 | 53.226 | 62 | 27 | 1 | 103 | 164 | 115 | 174 | 5.79e-12 | 65.5 |
| Msa1327780 | AT3G16350.1 | 46.591 | 88 | 38 | 4 | 56 | 143 | 106 | 184 | 5.96e-11 | 62.8 |
| Msa1327780 | AT1G70000.1 | 76.316 | 38 | 9 | 0 | 104 | 141 | 106 | 143 | 9.94e-11 | 61.2 |
| Msa1327780 | AT1G70000.2 | 76.316 | 38 | 9 | 0 | 104 | 141 | 106 | 143 | 9.94e-11 | 61.2 |
Find 81 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCTTGCTTGACCGGTAAT+TGG | 0.261142 | 8_4:+45245066 | None:intergenic |
| TCACAGAACAATGGATGAAA+TGG | 0.332083 | 8_4:-45247841 | None:intergenic |
| GATATCAACCACATTGAATC+TGG | 0.342793 | 8_4:-45247660 | Msa1327780:CDS |
| GGCATAACTGTCTCAGAAAC+TGG | 0.395799 | 8_4:+45244835 | None:intergenic |
| CACCCCATCCATGGTTCTCC+AGG | 0.402855 | 8_4:+45245265 | None:intergenic |
| GGAGACATGGATTATGGTCT+TGG | 0.404056 | 8_4:-45244859 | Msa1327780:CDS |
| GCTCCCGGAGACATGGATTA+TGG | 0.405160 | 8_4:-45244865 | Msa1327780:CDS |
| AAAATCGCGGCTGATGTGCC+TGG | 0.417984 | 8_4:-45247729 | Msa1327780:CDS |
| GCTGGAATACACGCTGCTCC+TGG | 0.421919 | 8_4:-45244949 | Msa1327780:CDS |
| TTGAACAGGCTATTTCTTCA+AGG | 0.422344 | 8_4:-45245288 | Msa1327780:CDS |
| AGCAGAATTGCTTGCTTGAC+CGG | 0.425370 | 8_4:+45245059 | None:intergenic |
| TTGATTCCAGCAGGTGGGAC+TGG | 0.426711 | 8_4:+45245000 | None:intergenic |
| GATACAACTGGTCCTCCTAT+AGG | 0.431345 | 8_4:+45244916 | None:intergenic |
| TACACGCTGCTCCTGGGATC+GGG | 0.437370 | 8_4:-45244942 | Msa1327780:CDS |
| CCTGGGATCGGGCAACCTAT+AGG | 0.438438 | 8_4:-45244931 | Msa1327780:CDS |
| TGTATTCCAGCAGGTGGGGC+TGG | 0.439045 | 8_4:+45244961 | None:intergenic |
| GTCATAGGACCCAGGTTCAT+TGG | 0.445696 | 8_4:+45244805 | None:intergenic |
| GCACCTCAAGGACCAATTAC+CGG | 0.448210 | 8_4:-45245078 | Msa1327780:CDS |
| AATTCTGCTGCAAGTTCTGC+TGG | 0.448212 | 8_4:-45245045 | Msa1327780:CDS |
| AATCCTCCAGCCCCACCTGC+TGG | 0.449144 | 8_4:-45244967 | Msa1327780:CDS |
| CAGGCTATTTCTTCAAGGCC+TGG | 0.460201 | 8_4:-45245283 | Msa1327780:CDS |
| CATCGATCCACAACGTCCTC+GGG | 0.461836 | 8_4:+45247756 | None:intergenic |
| GCTCCTCCAGTCCCACCTGC+TGG | 0.465316 | 8_4:-45245006 | Msa1327780:CDS |
| CCCAGGTTCATTGGTACCCC+TGG | 0.466627 | 8_4:+45244814 | None:intergenic |
| TGGGACTGGAGGAGCTTGTT+CGG | 0.472434 | 8_4:+45245014 | None:intergenic |
| GTGAAGGAGGAGCTGTGAAA+AGG | 0.473544 | 8_4:-45247581 | Msa1327780:CDS |
| CACAGAACAATGGATGAAAT+GGG | 0.481775 | 8_4:-45247840 | None:intergenic |
| AGAACCATGGATGGGGTGAC+TGG | 0.483144 | 8_4:-45245260 | Msa1327780:CDS |
| CTGGAATACACGCTGCTCCT+GGG | 0.493957 | 8_4:-45244948 | Msa1327780:CDS |
| TGAAGGAGGAGCTGTGAAAA+GGG | 0.494794 | 8_4:-45247580 | Msa1327780:CDS |
| ATACACGCTGCTCCTGGGAT+CGG | 0.497217 | 8_4:-45244943 | Msa1327780:CDS |
| CCATCGATCCACAACGTCCT+CGG | 0.498372 | 8_4:+45247755 | None:intergenic |
| GCCAGGGGTACCAATGAACC+TGG | 0.500745 | 8_4:-45244815 | Msa1327780:CDS |
| AGCTGTGAAAAGGGGAACTA+AGG | 0.503790 | 8_4:-45247571 | Msa1327780:CDS |
| GTACCAACTGCAGATACAAC+TGG | 0.516981 | 8_4:+45244904 | None:intergenic |
| CCGAGGACGTTGTGGATCGA+TGG | 0.518278 | 8_4:-45247755 | Msa1327780:CDS |
| CCTATAGGTTGCCCGATCCC+AGG | 0.518381 | 8_4:+45244931 | None:intergenic |
| TCAGAAATACAAAATTCGTC+AGG | 0.519592 | 8_4:-45245178 | Msa1327780:CDS |
| AAAGGTAACATCATGTATGC+TGG | 0.520807 | 8_4:+45245122 | None:intergenic |
| TGTTGCATGGCATATGTCAT+AGG | 0.522230 | 8_4:+45244790 | None:intergenic |
| CAAAGCATTTGAAAATGCAT+TGG | 0.524922 | 8_4:-45247787 | Msa1327780:CDS |
| TGAAAGAGAAGAAAGAAAGA+AGG | 0.525485 | 8_4:-45245149 | Msa1327780:CDS |
| CCGGGAGCAGTAAAATTCAC+TGG | 0.526088 | 8_4:+45244880 | None:intergenic |
| ATTCCAGCAGGTGGGGCTGG+AGG | 0.527139 | 8_4:+45244964 | None:intergenic |
| AGCGTGTATTCCAGCAGGTG+GGG | 0.532991 | 8_4:+45244957 | None:intergenic |
| GCATGGCTTGCTACTTGTGT+AGG | 0.536057 | 8_4:+45245201 | None:intergenic |
| AAGACCATAATCCATGTCTC+CGG | 0.538089 | 8_4:+45244861 | None:intergenic |
| CAGCGTGTATTCCAGCAGGT+GGG | 0.540781 | 8_4:+45244956 | None:intergenic |
| GGAGCAGCGTGTATTCCAGC+AGG | 0.541289 | 8_4:+45244952 | None:intergenic |
| GTTTCTGAGACAGTTATGCC+AGG | 0.548613 | 8_4:-45244832 | Msa1327780:CDS |
| GCAGCGTGTATTCCAGCAGG+TGG | 0.551793 | 8_4:+45244955 | None:intergenic |
| TCAACAAAGCGTACTGGTGA+AGG | 0.552257 | 8_4:-45247597 | Msa1327780:CDS |
| AAGAGCTCAACAAAGCGTAC+TGG | 0.557196 | 8_4:-45247603 | Msa1327780:CDS |
| AAGGCCTGGAGAACCATGGA+TGG | 0.559427 | 8_4:-45245269 | Msa1327780:CDS |
| AGACCATAATCCATGTCTCC+GGG | 0.563041 | 8_4:+45244862 | None:intergenic |
| AAATCGCGGCTGATGTGCCT+GGG | 0.567997 | 8_4:-45247728 | Msa1327780:CDS |
| CGAGGACGTTGTGGATCGAT+GGG | 0.568594 | 8_4:-45247754 | Msa1327780:CDS |
| TTCGCCAGTCACCCCATCCA+TGG | 0.577904 | 8_4:+45245256 | None:intergenic |
| ATTCCAGCAGGTGGGACTGG+AGG | 0.578008 | 8_4:+45245003 | None:intergenic |
| AGGCCTGGAGAACCATGGAT+GGG | 0.582995 | 8_4:-45245268 | Msa1327780:CDS |
| GAATTATCCCGAGGACGTTG+TGG | 0.584276 | 8_4:-45247763 | Msa1327780:CDS |
| AAAGAATCATAATCTGGCAG+AGG | 0.587497 | 8_4:+45247630 | None:intergenic |
| TTTCTGAGACAGTTATGCCA+GGG | 0.595865 | 8_4:-45244831 | Msa1327780:CDS |
| GGACCAGTTGTATCTGCAGT+TGG | 0.597989 | 8_4:-45244907 | Msa1327780:CDS |
| AGAGATTAAGCGTCACTATG+TGG | 0.598823 | 8_4:-45247694 | Msa1327780:CDS |
| CTTCAAGGCCTGGAGAACCA+TGG | 0.600275 | 8_4:-45245273 | Msa1327780:CDS |
| GTGACTGGCGAAGTATATCA+AGG | 0.602104 | 8_4:-45245245 | Msa1327780:CDS |
| GGCCTGGAGAACCATGGATG+GGG | 0.620882 | 8_4:-45245267 | Msa1327780:CDS |
| AAATGGGTAGCAGCTGTGAG+TGG | 0.631015 | 8_4:-45247824 | Msa1327780:CDS |
| ACAAAGCGTACTGGTGAAGG+AGG | 0.640829 | 8_4:-45247594 | Msa1327780:CDS |
| GGAGACATTTCAGCACCTCA+AGG | 0.642144 | 8_4:-45245090 | Msa1327780:CDS |
| TTCTGAGACAGTTATGCCAG+GGG | 0.654155 | 8_4:-45244830 | Msa1327780:CDS |
| GAAGGAGGAGCTGTGAAAAG+GGG | 0.656925 | 8_4:-45247579 | Msa1327780:CDS |
| TGGCATATGTCATAGGACCC+AGG | 0.664666 | 8_4:+45244797 | None:intergenic |
| CCAGGGGTACCAATGAACCT+GGG | 0.686028 | 8_4:-45244814 | Msa1327780:CDS |
| TGCATTGGCGAATTATCCCG+AGG | 0.693717 | 8_4:-45247772 | Msa1327780:CDS |
| TTGAGCATATGTATGTTGCA+TGG | 0.694059 | 8_4:+45244777 | None:intergenic |
| TGACCGGTAATTGGTCCTTG+AGG | 0.703451 | 8_4:+45245075 | None:intergenic |
| GGATCGATGGGAGAAAATCG+CGG | 0.726953 | 8_4:-45247742 | Msa1327780:CDS |
| AAGTATATCAAGGTACAGTG+TGG | 0.727880 | 8_4:-45245235 | Msa1327780:CDS |
| GCACAAAACCAGATTCAATG+TGG | 0.730016 | 8_4:+45247652 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATTTAAATAAAATAA+AGG | + | chr8_4:45245415-45245434 | None:intergenic | 0.0% |
| !! | ACTAAAATCATATTTAAATA+CGG | + | chr8_4:45245125-45245144 | None:intergenic | 10.0% |
| !!! | TTAATAATTATAGTGTTTTT+TGG | + | chr8_4:45245367-45245386 | None:intergenic | 10.0% |
| !!! | TCTTGTAAGTTTTTTTTTAT+TGG | - | chr8_4:45245175-45245194 | Msa1327780:CDS | 15.0% |
| !! | AATCTAAACAAAAAAACTTA+GGG | - | chr8_4:45245332-45245351 | Msa1327780:intron | 15.0% |
| !! | TATTTAAATATATACTCTTG+AGG | - | chr8_4:45245421-45245440 | Msa1327780:intron | 15.0% |
| !!! | TTCATTGATGTTTTAATTTT+AGG | + | chr8_4:45246260-45246279 | None:intergenic | 15.0% |
| !!! | TATAATAACTTTTCTAACAT+GGG | - | chr8_4:45246941-45246960 | Msa1327780:intron | 15.0% |
| !! | TTTGAAAAAGAATCATAATC+TGG | + | chr8_4:45244981-45245000 | None:intergenic | 20.0% |
| !! | GAATCTAAACAAAAAAACTT+AGG | - | chr8_4:45245331-45245350 | Msa1327780:intron | 20.0% |
| !! | ACACTATAATTATTAATTGC+AGG | - | chr8_4:45245371-45245390 | Msa1327780:intron | 20.0% |
| !! | CACTATAATTATTAATTGCA+GGG | - | chr8_4:45245372-45245391 | Msa1327780:intron | 20.0% |
| !! | GATATGAATGATTAAAATGA+TGG | - | chr8_4:45245572-45245591 | Msa1327780:intron | 20.0% |
| !! | GAATGAAGTAAATAAAACTA+TGG | - | chr8_4:45245916-45245935 | Msa1327780:intron | 20.0% |
| !! | ATAAAACTATGGATTTAATG+AGG | - | chr8_4:45245927-45245946 | Msa1327780:intron | 20.0% |
| !!! | GTAAGTTCTAATAAATACAT+TGG | + | chr8_4:45246062-45246081 | None:intergenic | 20.0% |
| !!! | TTTTAGGATGTTTTAATTCT+AGG | + | chr8_4:45246244-45246263 | None:intergenic | 20.0% |
| !! | AAAACATCAATGAAAATGTA+TGG | - | chr8_4:45246266-45246285 | Msa1327780:intron | 20.0% |
| !! | AAACATCAATGAAAATGTAT+GGG | - | chr8_4:45246267-45246286 | Msa1327780:intron | 20.0% |
| !!! | GTATAATAACTTTTCTAACA+TGG | - | chr8_4:45246940-45246959 | Msa1327780:intron | 20.0% |
| !! | TTGGTAAATACTGATAAATA+AGG | - | chr8_4:45246983-45247002 | Msa1327780:intron | 20.0% |
| !!! | CAACCATTTTTGAATTTACT+GGG | - | chr8_4:45245305-45245324 | Msa1327780:CDS | 25.0% |
| !!! | TGTGCCTTAAAATTTTTCAA+CGG | - | chr8_4:45245784-45245803 | Msa1327780:intron | 25.0% |
| !! | AGATCCGTTGAAAAATTTTA+AGG | + | chr8_4:45245791-45245810 | None:intergenic | 25.0% |
| !! | TTTTACTAAACCATTGTATC+TGG | - | chr8_4:45245849-45245868 | Msa1327780:intron | 25.0% |
| !!! | TAGCATTTATCTAAGGTTTT+AGG | - | chr8_4:45245890-45245909 | Msa1327780:intron | 25.0% |
| ! | TGTAATAAATTCTTCTGATG+TGG | - | chr8_4:45246025-45246044 | Msa1327780:intron | 25.0% |
| ! | TAGTAGGATTAAATAGTGTT+GGG | - | chr8_4:45246109-45246128 | Msa1327780:intron | 25.0% |
| ! | AACATCAATGAAAATGTATG+GGG | - | chr8_4:45246268-45246287 | Msa1327780:intron | 25.0% |
| ! | TAGGATATTGTGTTAGTATT+AGG | + | chr8_4:45246377-45246396 | None:intergenic | 25.0% |
| ! | AGACTTTGATACATTGATAT+AGG | - | chr8_4:45246455-45246474 | Msa1327780:intron | 25.0% |
| !! | TTAGTAACTTTTCCAAAGAT+TGG | + | chr8_4:45246556-45246575 | None:intergenic | 25.0% |
| !! | TTGACTAAATTTAGAGTTAC+TGG | - | chr8_4:45246837-45246856 | Msa1327780:intron | 25.0% |
| ! | AAAGTTTGAATTAGGAAGTT+TGG | - | chr8_4:45246964-45246983 | Msa1327780:intron | 25.0% |
| ! | TGATAAATAAGGACTAGAAT+TGG | - | chr8_4:45246994-45247013 | Msa1327780:intron | 25.0% |
| ! | GATAAATAAGGACTAGAATT+GGG | - | chr8_4:45246995-45247014 | Msa1327780:intron | 25.0% |
| !!! | AAACACAGAAGTTTTTTACT+AGG | - | chr8_4:45247035-45247054 | Msa1327780:intron | 25.0% |
| ! | AAAACCAAAAAGATCTGATA+GGG | + | chr8_4:45247146-45247165 | None:intergenic | 25.0% |
| ! | TAAAACCAAAAAGATCTGAT+AGG | + | chr8_4:45247147-45247166 | None:intergenic | 25.0% |
| ! | TGTTACTGATAATCATCTAA+TGG | + | chr8_4:45247184-45247203 | None:intergenic | 25.0% |
| ! | AATTGCAGACATTAGTTATA+TGG | - | chr8_4:45247206-45247225 | Msa1327780:intron | 25.0% |
| !!! | TATTTTCAAGTTTGTTGAAC+AGG | - | chr8_4:45247300-45247319 | Msa1327780:intron | 25.0% |
| ! | GATGTTACCTTTGTAAAAAA+TGG | - | chr8_4:45247491-45247510 | Msa1327780:intron | 25.0% |
| !!! | AATGTCTCCATTTTTTACAA+AGG | + | chr8_4:45247501-45247520 | None:intergenic | 25.0% |
| ! | CAAAGCATTTGAAAATGCAT+TGG | - | chr8_4:45244815-45244834 | Msa1327780:CDS | 30.0% |
| ! | TCACGTGATGTGATTTTATT+GGG | - | chr8_4:45245256-45245275 | Msa1327780:CDS | 30.0% |
| !! | GCAACCATTTTTGAATTTAC+TGG | - | chr8_4:45245304-45245323 | Msa1327780:CDS | 30.0% |
| ! | CATTTTTGAATTTACTGGGA+CGG | - | chr8_4:45245309-45245328 | Msa1327780:intron | 30.0% |
| CTAAACAAAAAAACTTAGGG+AGG | - | chr8_4:45245335-45245354 | Msa1327780:intron | 30.0% | |
| !!! | GTTTTGAAGCTTATATGTGT+CGG | - | chr8_4:45245443-45245462 | Msa1327780:intron | 30.0% |
| ATATCAGTATCGTCAAATAG+CGG | + | chr8_4:45245742-45245761 | None:intergenic | 30.0% | |
| ATAAATACATTGGATCACAG+AGG | + | chr8_4:45246052-45246071 | None:intergenic | 30.0% | |
| ACTTACTACACTTCTAATGA+CGG | - | chr8_4:45246076-45246095 | Msa1327780:intron | 30.0% | |
| CTAGTAGGATTAAATAGTGT+TGG | - | chr8_4:45246108-45246127 | Msa1327780:intron | 30.0% | |
| !! | AACTTCCTTGATGATTTTAG+TGG | - | chr8_4:45246342-45246361 | Msa1327780:intron | 30.0% |
| ACAAACCACTAAAATCATCA+AGG | + | chr8_4:45246350-45246369 | None:intergenic | 30.0% | |
| AATGTATCAAAGTCTAAACG+AGG | + | chr8_4:45246450-45246469 | None:intergenic | 30.0% | |
| ! | TGTTTTGCTGGATTTTGTTA+TGG | - | chr8_4:45246523-45246542 | Msa1327780:intron | 30.0% |
| !! | GTTTTGCTGGATTTTGTTAT+GGG | - | chr8_4:45246524-45246543 | Msa1327780:intron | 30.0% |
| ATATCAGATCTGTGAAACAA+TGG | - | chr8_4:45246575-45246594 | Msa1327780:intron | 30.0% | |
| ATCTGTGAAACAATGGTATT+AGG | - | chr8_4:45246582-45246601 | Msa1327780:intron | 30.0% | |
| AATGTAGAACAATGTATTGC+TGG | - | chr8_4:45246622-45246641 | Msa1327780:intron | 30.0% | |
| CAAATGCCAATATCATTTAC+TGG | - | chr8_4:45246677-45246696 | Msa1327780:intron | 30.0% | |
| AACATGGGAAAGTTTGAATT+AGG | - | chr8_4:45246956-45246975 | Msa1327780:intron | 30.0% | |
| !!! | ACAGAAGTTTTTTACTAGGT+TGG | - | chr8_4:45247039-45247058 | Msa1327780:intron | 30.0% |
| !! | GAATTTTGTATTTCTGAGCA+TGG | + | chr8_4:45247421-45247440 | None:intergenic | 30.0% |
| TCAGAAATACAAAATTCGTC+AGG | - | chr8_4:45247424-45247443 | Msa1327780:intron | 30.0% | |
| TGAAAGAGAAGAAAGAAAGA+AGG | - | chr8_4:45247453-45247472 | Msa1327780:intron | 30.0% | |
| !!! | ATCTCTTCTAAAGTTTTCCC+AGG | + | chr8_4:45244894-45244913 | None:intergenic | 35.0% |
| GATATCAACCACATTGAATC+TGG | - | chr8_4:45244942-45244961 | Msa1327780:CDS | 35.0% | |
| AAAGAATCATAATCTGGCAG+AGG | + | chr8_4:45244975-45244994 | None:intergenic | 35.0% | |
| ! | CTTCGAGTTCTTATCAAGAT+CGG | - | chr8_4:45245054-45245073 | Msa1327780:CDS | 35.0% |
| CAAAAAACGCTATAGTTGCA+AGG | + | chr8_4:45245148-45245167 | None:intergenic | 35.0% | |
| !!! | CTTGCAACTATAGCGTTTTT+TGG | - | chr8_4:45245146-45245165 | Msa1327780:CDS | 35.0% |
| AAGCTAACATCAGGAACTAA+AGG | + | chr8_4:45245230-45245249 | None:intergenic | 35.0% | |
| ! | AGTTCCTGATGTTAGCTTAT+TGG | - | chr8_4:45245232-45245251 | Msa1327780:CDS | 35.0% |
| ! | GTTCCTGATGTTAGCTTATT+GGG | - | chr8_4:45245233-45245252 | Msa1327780:CDS | 35.0% |
| ! | GTCACGTGATGTGATTTTAT+TGG | - | chr8_4:45245255-45245274 | Msa1327780:CDS | 35.0% |
| CGTCCCAGTAAATTCAAAAA+TGG | + | chr8_4:45245311-45245330 | None:intergenic | 35.0% | |
| ATTGCGAAAAATAGCCATGA+CGG | - | chr8_4:45245480-45245499 | Msa1327780:intron | 35.0% | |
| ! | CCTTTACTGATTGGATATGA+CGG | + | chr8_4:45245531-45245550 | None:intergenic | 35.0% |
| CGTCATATCCAATCAGTAAA+GGG | - | chr8_4:45245529-45245548 | Msa1327780:intron | 35.0% | |
| !!! | AAGGGCATCATAGTGTTTTA+TGG | - | chr8_4:45245547-45245566 | Msa1327780:intron | 35.0% |
| ! | TTGTAGCCAGTGTTATTGAT+GGG | + | chr8_4:45245612-45245631 | None:intergenic | 35.0% |
| ! | ATTGTAGCCAGTGTTATTGA+TGG | + | chr8_4:45245613-45245632 | None:intergenic | 35.0% |
| GTGCTACACTATTAAGTACA+AGG | + | chr8_4:45245659-45245678 | None:intergenic | 35.0% | |
| AAACAGTCACAGTAGTTAAC+TGG | + | chr8_4:45245832-45245851 | None:intergenic | 35.0% | |
| TAAAGGAGAACCAGATACAA+TGG | + | chr8_4:45245862-45245881 | None:intergenic | 35.0% | |
| ! | TAAATGCTACGTACTGGTAA+AGG | + | chr8_4:45245879-45245898 | None:intergenic | 35.0% |
| CTTAGATAAATGCTACGTAC+TGG | + | chr8_4:45245885-45245904 | None:intergenic | 35.0% | |
| CAGTACGTAGCATTTATCTA+AGG | - | chr8_4:45245883-45245902 | Msa1327780:intron | 35.0% | |
| TTCCATCATCCATGTTAGAA+GGG | - | chr8_4:45245979-45245998 | Msa1327780:intron | 35.0% | |
| AATCACAATCCCTTCTAACA+TGG | + | chr8_4:45245991-45246010 | None:intergenic | 35.0% | |
| CAATTCAAATGCATGCTTCA+CGG | + | chr8_4:45246213-45246232 | None:intergenic | 35.0% | |
| GTGAAGCATGCATTTGAATT+GGG | - | chr8_4:45246212-45246231 | Msa1327780:intron | 35.0% | |
| AGAACATCTAACATCGTTGT+AGG | + | chr8_4:45246396-45246415 | None:intergenic | 35.0% | |
| TATGGGTTTACTCCAATCTT+TGG | - | chr8_4:45246541-45246560 | Msa1327780:intron | 35.0% | |
| ATCCTTGCACAAATTGTCTA+TGG | + | chr8_4:45246726-45246745 | None:intergenic | 35.0% | |
| ACTAAGATCCAGCAAAAAGA+TGG | + | chr8_4:45246922-45246941 | None:intergenic | 35.0% | |
| !! | TTTTTACTAGGTTGGAAGCT+CGG | - | chr8_4:45247047-45247066 | Msa1327780:intron | 35.0% |
| TAGTTACTTGTCAGAGGTAA+TGG | + | chr8_4:45247118-45247137 | None:intergenic | 35.0% | |
| GACTATTAGTTACTTGTCAG+AGG | + | chr8_4:45247124-45247143 | None:intergenic | 35.0% | |
| ! | TAGTCCCTATCAGATCTTTT+TGG | - | chr8_4:45247139-45247158 | Msa1327780:intron | 35.0% |
| !! | TTGAACAGGCTATTTCTTCA+AGG | - | chr8_4:45247314-45247333 | Msa1327780:intron | 35.0% |
| AAGTATATCAAGGTACAGTG+TGG | - | chr8_4:45247367-45247386 | Msa1327780:intron | 35.0% | |
| AAAGGTAACATCATGTATGC+TGG | + | chr8_4:45247483-45247502 | None:intergenic | 35.0% | |
| TTGAGCATATGTATGTTGCA+TGG | + | chr8_4:45247828-45247847 | None:intergenic | 35.0% | |
| AGAGATTAAGCGTCACTATG+TGG | - | chr8_4:45244908-45244927 | Msa1327780:CDS | 40.0% | |
| GCACAAAACCAGATTCAATG+TGG | + | chr8_4:45244953-45244972 | None:intergenic | 40.0% | |
| TTCTTATCAAGATCGGCGAA+AGG | - | chr8_4:45245061-45245080 | Msa1327780:CDS | 40.0% | |
| TCTTATCAAGATCGGCGAAA+GGG | - | chr8_4:45245062-45245081 | Msa1327780:CDS | 40.0% | |
| TGACCCAATAAGCTAACATC+AGG | + | chr8_4:45245239-45245258 | None:intergenic | 40.0% | |
| !! | ATGTGTCGGTGTTACAATTG+CGG | - | chr8_4:45245457-45245476 | Msa1327780:intron | 40.0% |
| !! | AAAATAGCCATGACGGATTG+CGG | - | chr8_4:45245487-45245506 | Msa1327780:intron | 40.0% |
| ! | GGATTGCGGTAACAGATTTT+TGG | - | chr8_4:45245501-45245520 | Msa1327780:intron | 40.0% |
| CCGTCATATCCAATCAGTAA+AGG | - | chr8_4:45245528-45245547 | Msa1327780:intron | 40.0% | |
| CTATGATGCCCTTTACTGAT+TGG | + | chr8_4:45245540-45245559 | None:intergenic | 40.0% | |
| ! | GGCATCATAGTGTTTTATGG+TGG | - | chr8_4:45245550-45245569 | Msa1327780:intron | 40.0% |
| ! | TGTAGCCAGTGTTATTGATG+GGG | + | chr8_4:45245611-45245630 | None:intergenic | 40.0% |
| GTTCCATCATCCATGTTAGA+AGG | - | chr8_4:45245978-45245997 | Msa1327780:intron | 40.0% | |
| ATCCCTTCTAACATGGATGA+TGG | + | chr8_4:45245984-45246003 | None:intergenic | 40.0% | |
| ! | ATAGTGTTGGGTAAAGCGTT+TGG | - | chr8_4:45246121-45246140 | Msa1327780:intron | 40.0% |
| ! | TAGTGTTGGGTAAAGCGTTT+GGG | - | chr8_4:45246122-45246141 | Msa1327780:intron | 40.0% |
| AAATCCTAGTGGTCCTTGAT+TGG | - | chr8_4:45246149-45246168 | Msa1327780:intron | 40.0% | |
| TCCTTGATTGGTAGGTCATT+TGG | - | chr8_4:45246161-45246180 | Msa1327780:intron | 40.0% | |
| TCCAAATGACCTACCAATCA+AGG | + | chr8_4:45246165-45246184 | None:intergenic | 40.0% | |
| TTGATTGGTAGGTCATTTGG+AGG | - | chr8_4:45246164-45246183 | Msa1327780:intron | 40.0% | |
| CGTGAAGCATGCATTTGAAT+TGG | - | chr8_4:45246211-45246230 | Msa1327780:intron | 40.0% | |
| AGTGTAACACACTGCAACAT+TGG | + | chr8_4:45246499-45246518 | None:intergenic | 40.0% | |
| AATGTTGCAGTGTGTTACAC+TGG | - | chr8_4:45246498-45246517 | Msa1327780:intron | 40.0% | |
| !! | GTTACACTGGATTGTTTTGC+TGG | - | chr8_4:45246511-45246530 | Msa1327780:intron | 40.0% |
| AATATCATTTACTGGCGTGG+CGG | - | chr8_4:45246685-45246704 | Msa1327780:intron | 40.0% | |
| CTTGCACAAATTGTCTATGG+TGG | + | chr8_4:45246723-45246742 | None:intergenic | 40.0% | |
| CACCATAGACAATTTGTGCA+AGG | - | chr8_4:45246721-45246740 | Msa1327780:intron | 40.0% | |
| !!! | GGCTGCAATGCTGTTTTTTA+CGG | - | chr8_4:45246767-45246786 | Msa1327780:intron | 40.0% |
| !!! | TGCAATGCTGTTTTTTACGG+CGG | - | chr8_4:45246770-45246789 | Msa1327780:intron | 40.0% |
| !!! | TCAAGAGTTTTGATTCCAGC+AGG | + | chr8_4:45247614-45247633 | None:intergenic | 40.0% |
| AAGACCATAATCCATGTCTC+CGG | + | chr8_4:45247744-45247763 | None:intergenic | 40.0% | |
| !! | TTTCTGAGACAGTTATGCCA+GGG | - | chr8_4:45247771-45247790 | Msa1327780:CDS | 40.0% |
| TGTTGCATGGCATATGTCAT+AGG | + | chr8_4:45247815-45247834 | None:intergenic | 40.0% | |
| AAGAGCTCAACAAAGCGTAC+TGG | - | chr8_4:45244999-45245018 | Msa1327780:CDS | 45.0% | |
| ! | TCAACAAAGCGTACTGGTGA+AGG | - | chr8_4:45245005-45245024 | Msa1327780:CDS | 45.0% |
| TGAAGGAGGAGCTGTGAAAA+GGG | - | chr8_4:45245022-45245041 | Msa1327780:CDS | 45.0% | |
| AGCTGTGAAAAGGGGAACTA+AGG | - | chr8_4:45245031-45245050 | Msa1327780:CDS | 45.0% | |
| CTATGTTCATCTTCCGTCCA+AGG | + | chr8_4:45245092-45245111 | None:intergenic | 45.0% | |
| CTTGGACGGAAGATGAACAT+AGG | - | chr8_4:45245090-45245109 | Msa1327780:CDS | 45.0% | |
| CTTTCCCCCATCAATAACAC+TGG | - | chr8_4:45245603-45245622 | Msa1327780:intron | 45.0% | |
| ! | GTAGCCAGTGTTATTGATGG+GGG | + | chr8_4:45245610-45245629 | None:intergenic | 45.0% |
| AGGCACAGCTAACATAGCTT+AGG | + | chr8_4:45245771-45245790 | None:intergenic | 45.0% | |
| ! | TGACGGTTGACTCAACTAGT+AGG | - | chr8_4:45246093-45246112 | Msa1327780:intron | 45.0% |
| ! | AGTGTTGGGTAAAGCGTTTG+GGG | - | chr8_4:45246123-45246142 | Msa1327780:intron | 45.0% |
| ! | GTTTGGGGTTCAAATCCTAG+TGG | - | chr8_4:45246138-45246157 | Msa1327780:intron | 45.0% |
| GTAACACACTGCAACATTGG+AGG | + | chr8_4:45246496-45246515 | None:intergenic | 45.0% | |
| GCCAATATCATTTACTGGCG+TGG | - | chr8_4:45246682-45246701 | Msa1327780:intron | 45.0% | |
| GCCACGCCAGTAAATGATAT+TGG | + | chr8_4:45246686-45246705 | None:intergenic | 45.0% | |
| ! | TTGTGCAAGGATGCTTGCTA+TGG | - | chr8_4:45246734-45246753 | Msa1327780:intron | 45.0% |
| !! | TGTGCAAGGATGCTTGCTAT+GGG | - | chr8_4:45246735-45246754 | Msa1327780:intron | 45.0% |
| ! | ACGAGTCTCCATCTTTTTGC+TGG | - | chr8_4:45246911-45246930 | Msa1327780:intron | 45.0% |
| GTGACTGGCGAAGTATATCA+AGG | - | chr8_4:45247357-45247376 | Msa1327780:intron | 45.0% | |
| TTGCTTGCTTGACCGGTAAT+TGG | + | chr8_4:45247539-45247558 | None:intergenic | 45.0% | |
| AGCAGAATTGCTTGCTTGAC+CGG | + | chr8_4:45247546-45247565 | None:intergenic | 45.0% | |
| AATTCTGCTGCAAGTTCTGC+TGG | - | chr8_4:45247557-45247576 | Msa1327780:intron | 45.0% | |
| !!! | GAGTTTTGATTCCAGCAGGT+GGG | + | chr8_4:45247610-45247629 | None:intergenic | 45.0% |
| !!! | AGAGTTTTGATTCCAGCAGG+TGG | + | chr8_4:45247611-45247630 | None:intergenic | 45.0% |
| GATACAACTGGTCCTCCTAT+AGG | + | chr8_4:45247689-45247708 | None:intergenic | 45.0% | |
| GTACCAACTGCAGATACAAC+TGG | + | chr8_4:45247701-45247720 | None:intergenic | 45.0% | |
| ! | CCAGTGAATTTTACTGCTCC+CGG | - | chr8_4:45247722-45247741 | Msa1327780:CDS | 45.0% |
| AGACCATAATCCATGTCTCC+GGG | + | chr8_4:45247743-45247762 | None:intergenic | 45.0% | |
| ! | GGAGACATGGATTATGGTCT+TGG | - | chr8_4:45247743-45247762 | Msa1327780:CDS | 45.0% |
| GGCATAACTGTCTCAGAAAC+TGG | + | chr8_4:45247770-45247789 | None:intergenic | 45.0% | |
| !! | GTTTCTGAGACAGTTATGCC+AGG | - | chr8_4:45247770-45247789 | Msa1327780:CDS | 45.0% |
| !! | TTCTGAGACAGTTATGCCAG+GGG | - | chr8_4:45247772-45247791 | Msa1327780:CDS | 45.0% |
| AAATGGGTAGCAGCTGTGAG+TGG | - | chr8_4:45244778-45244797 | Msa1327780:CDS | 50.0% | |
| ! | TGCATTGGCGAATTATCCCG+AGG | - | chr8_4:45244830-45244849 | Msa1327780:CDS | 50.0% |
| GAATTATCCCGAGGACGTTG+TGG | - | chr8_4:45244839-45244858 | Msa1327780:CDS | 50.0% | |
| GGATCGATGGGAGAAAATCG+CGG | - | chr8_4:45244860-45244879 | Msa1327780:CDS | 50.0% | |
| ! | ACAAAGCGTACTGGTGAAGG+AGG | - | chr8_4:45245008-45245027 | Msa1327780:CDS | 50.0% |
| GTGAAGGAGGAGCTGTGAAA+AGG | - | chr8_4:45245021-45245040 | Msa1327780:CDS | 50.0% | |
| GAAGGAGGAGCTGTGAAAAG+GGG | - | chr8_4:45245023-45245042 | Msa1327780:CDS | 50.0% | |
| TCTGTTACCGCAATCCGTCA+TGG | + | chr8_4:45245497-45245516 | None:intergenic | 50.0% | |
| TCGTCAAATAGCGGCTGTAG+TGG | + | chr8_4:45245733-45245752 | None:intergenic | 50.0% | |
| CCTACCAATCAAGGACCACT+AGG | + | chr8_4:45246156-45246175 | None:intergenic | 50.0% | |
| CCTAGTGGTCCTTGATTGGT+AGG | - | chr8_4:45246153-45246172 | Msa1327780:intron | 50.0% | |
| !! | GTGCAAGGATGCTTGCTATG+GGG | - | chr8_4:45246736-45246755 | Msa1327780:intron | 50.0% |
| !! | TGCAAGGATGCTTGCTATGG+GGG | - | chr8_4:45246737-45246756 | Msa1327780:intron | 50.0% |
| CAGTTTCGTCGACGTCAGAA+TGG | + | chr8_4:45246802-45246821 | None:intergenic | 50.0% | |
| TGACGTCGACGAAACTGATC+AGG | - | chr8_4:45246805-45246824 | Msa1327780:intron | 50.0% | |
| !! | CAGGCTATTTCTTCAAGGCC+TGG | - | chr8_4:45247319-45247338 | Msa1327780:intron | 50.0% |
| !! | GCATGGCTTGCTACTTGTGT+AGG | + | chr8_4:45247404-45247423 | None:intergenic | 50.0% |
| GGAGACATTTCAGCACCTCA+AGG | - | chr8_4:45247512-45247531 | Msa1327780:intron | 50.0% | |
| GCACCTCAAGGACCAATTAC+CGG | - | chr8_4:45247524-45247543 | Msa1327780:intron | 50.0% | |
| TGACCGGTAATTGGTCCTTG+AGG | + | chr8_4:45247530-45247549 | None:intergenic | 50.0% | |
| GGACCAGTTGTATCTGCAGT+TGG | - | chr8_4:45247695-45247714 | Msa1327780:CDS | 50.0% | |
| CCGGGAGCAGTAAAATTCAC+TGG | + | chr8_4:45247725-45247744 | None:intergenic | 50.0% | |
| ! | TTTTACTGCTCCCGGAGACA+TGG | - | chr8_4:45247730-45247749 | Msa1327780:CDS | 50.0% |
| GTCATAGGACCCAGGTTCAT+TGG | + | chr8_4:45247800-45247819 | None:intergenic | 50.0% | |
| TGGCATATGTCATAGGACCC+AGG | + | chr8_4:45247808-45247827 | None:intergenic | 50.0% | |
| CATCGATCCACAACGTCCTC+GGG | + | chr8_4:45244849-45244868 | None:intergenic | 55.0% | |
| CCATCGATCCACAACGTCCT+CGG | + | chr8_4:45244850-45244869 | None:intergenic | 55.0% | |
| CGAGGACGTTGTGGATCGAT+GGG | - | chr8_4:45244848-45244867 | Msa1327780:CDS | 55.0% | |
| AAAATCGCGGCTGATGTGCC+TGG | - | chr8_4:45244873-45244892 | Msa1327780:CDS | 55.0% | |
| AAATCGCGGCTGATGTGCCT+GGG | - | chr8_4:45244874-45244893 | Msa1327780:CDS | 55.0% | |
| !! | ATCGGCGAAAGGGTGTTCCT+TGG | - | chr8_4:45245072-45245091 | Msa1327780:CDS | 55.0% |
| !! | GCGAAAGGGTGTTCCTTGGA+CGG | - | chr8_4:45245076-45245095 | Msa1327780:CDS | 55.0% |
| !! | GCTTGCTATGGGGGTGCTAT+CGG | - | chr8_4:45246746-45246765 | Msa1327780:intron | 55.0% |
| CTTCAAGGCCTGGAGAACCA+TGG | - | chr8_4:45247329-45247348 | Msa1327780:intron | 55.0% | |
| AAGGCCTGGAGAACCATGGA+TGG | - | chr8_4:45247333-45247352 | Msa1327780:intron | 55.0% | |
| AGGCCTGGAGAACCATGGAT+GGG | - | chr8_4:45247334-45247353 | Msa1327780:intron | 55.0% | |
| AGAACCATGGATGGGGTGAC+TGG | - | chr8_4:45247342-45247361 | Msa1327780:intron | 55.0% | |
| ! | TGGGACTGGAGGAGCTTGTT+CGG | + | chr8_4:45247591-45247610 | None:intergenic | 55.0% |
| TTGATTCCAGCAGGTGGGAC+TGG | + | chr8_4:45247605-45247624 | None:intergenic | 55.0% | |
| AGCGTGTATTCCAGCAGGTG+GGG | + | chr8_4:45247648-45247667 | None:intergenic | 55.0% | |
| CAGCGTGTATTCCAGCAGGT+GGG | + | chr8_4:45247649-45247668 | None:intergenic | 55.0% | |
| CTGGAATACACGCTGCTCCT+GGG | - | chr8_4:45247654-45247673 | Msa1327780:CDS | 55.0% | |
| ATACACGCTGCTCCTGGGAT+CGG | - | chr8_4:45247659-45247678 | Msa1327780:CDS | 55.0% | |
| ! | GCTCCCGGAGACATGGATTA+TGG | - | chr8_4:45247737-45247756 | Msa1327780:CDS | 55.0% |
| !! | CCAGGGGTACCAATGAACCT+GGG | - | chr8_4:45247788-45247807 | Msa1327780:CDS | 55.0% |
| CCGAGGACGTTGTGGATCGA+TGG | - | chr8_4:45244847-45244866 | Msa1327780:CDS | 60.0% | |
| GGCCTGGAGAACCATGGATG+GGG | - | chr8_4:45247335-45247354 | Msa1327780:intron | 60.0% | |
| CACCCCATCCATGGTTCTCC+AGG | + | chr8_4:45247340-45247359 | None:intergenic | 60.0% | |
| TTCGCCAGTCACCCCATCCA+TGG | + | chr8_4:45247349-45247368 | None:intergenic | 60.0% | |
| ATTCCAGCAGGTGGGACTGG+AGG | + | chr8_4:45247602-45247621 | None:intergenic | 60.0% | |
| TGTATTCCAGCAGGTGGGGC+TGG | + | chr8_4:45247644-45247663 | None:intergenic | 60.0% | |
| GCAGCGTGTATTCCAGCAGG+TGG | + | chr8_4:45247650-45247669 | None:intergenic | 60.0% | |
| GGAGCAGCGTGTATTCCAGC+AGG | + | chr8_4:45247653-45247672 | None:intergenic | 60.0% | |
| GCTGGAATACACGCTGCTCC+TGG | - | chr8_4:45247653-45247672 | Msa1327780:CDS | 60.0% | |
| TACACGCTGCTCCTGGGATC+GGG | - | chr8_4:45247660-45247679 | Msa1327780:CDS | 60.0% | |
| CCTATAGGTTGCCCGATCCC+AGG | + | chr8_4:45247674-45247693 | None:intergenic | 60.0% | |
| CCTGGGATCGGGCAACCTAT+AGG | - | chr8_4:45247671-45247690 | Msa1327780:CDS | 60.0% | |
| GGGATCGGGCAACCTATAGG+AGG | - | chr8_4:45247674-45247693 | Msa1327780:CDS | 60.0% | |
| !! | GCCAGGGGTACCAATGAACC+TGG | - | chr8_4:45247787-45247806 | Msa1327780:CDS | 60.0% |
| CCCAGGTTCATTGGTACCCC+TGG | + | chr8_4:45247791-45247810 | None:intergenic | 60.0% | |
| AATCCTCCAGCCCCACCTGC+TGG | - | chr8_4:45247635-45247654 | Msa1327780:CDS | 65.0% | |
| ATTCCAGCAGGTGGGGCTGG+AGG | + | chr8_4:45247641-45247660 | None:intergenic | 65.0% | |
| GCTCCTCCAGTCCCACCTGC+TGG | - | chr8_4:45247596-45247615 | Msa1327780:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 45244771 | 45247853 | 45244771 | ID=Msa1327780;Name=Msa1327780 |
| chr8_4 | mRNA | 45244771 | 45247853 | 45244771 | ID=Msa1327780-mRNA-1;Parent=Msa1327780;Name=Msa1327780-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|1|1|2|0|280 |
| chr8_4 | exon | 45247565 | 45247853 | 45247565 | ID=Msa1327780-mRNA-1:exon:12673;Parent=Msa1327780-mRNA-1 |
| chr8_4 | exon | 45244771 | 45245324 | 45244771 | ID=Msa1327780-mRNA-1:exon:12672;Parent=Msa1327780-mRNA-1 |
| chr8_4 | CDS | 45247565 | 45247853 | 45247565 | ID=Msa1327780-mRNA-1:cds;Parent=Msa1327780-mRNA-1 |
| chr8_4 | CDS | 45244771 | 45245324 | 45244771 | ID=Msa1327780-mRNA-1:cds;Parent=Msa1327780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
