AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1330030


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1330030 MtrunA17_Chr4g0063361 77.273 242 35 4 1 223 1 241 1.04e-130 374
Msa1330030 MtrunA17_Chr4g0063361 47.872 94 21 2 297 362 3 96 2.77e-17 80.5
Msa1330030 MtrunA17_Chr4g0063401 57.255 255 69 7 1 223 1 247 7.65e-94 281
Msa1330030 MtrunA17_Chr4g0063401 44.444 90 27 3 296 362 2 91 3.97e-12 65.9
Msa1330030 MtrunA17_Chr4g0063391 47.951 244 80 7 1 228 1 213 4.70e-63 201
Msa1330030 MtrunA17_Chr4g0063391 89.394 66 7 0 297 362 3 68 4.26e-34 125
Msa1330030 MtrunA17_Chr4g0063371 38.944 303 97 8 1 288 1 230 1.74e-58 189
Msa1330030 MtrunA17_Chr4g0063371 77.778 72 8 1 297 360 3 74 3.13e-30 115
Msa1330030 MtrunA17_Chr3g0098251 42.268 194 70 7 51 224 7 178 1.49e-38 137
Msa1330030 MtrunA17_Chr8g0360671 40.426 141 45 5 101 224 41 159 1.02e-20 88.2
Msa1330030 MtrunA17_Chr8g0366501 28.328 293 112 10 82 289 95 374 7.87e-19 87.0
Msa1330030 MtrunA17_Chr4g0063411 60.870 69 23 3 223 289 24 90 2.26e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1330030 AT3G19360.1 35.625 320 128 10 49 292 59 376 3.32e-50 173
Msa1330030 AT3G19360.2 35.625 320 128 10 49 292 59 376 3.32e-50 173
Msa1330030 AT2G35430.1 28.444 225 96 7 82 289 74 250 1.74e-15 75.9

Find 96 sgRNAs with CRISPR-Local

Find 566 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAAGATCAATCGTGTTTA+TGG 0.098083 8_4:+49065879 Msa1330030:CDS
TCCTTTGCCACAAGTCTTGC+AGG 0.252708 8_4:-49065813 None:intergenic
GACAGCAGCAGCTGAGAAAT+TGG 0.269527 8_4:+49063924 Msa1330030:CDS
ATTGGTTCTTCAAAGTCATT+TGG 0.270173 8_4:+49064112 Msa1330030:CDS
ATGAGGATCCTGCTAAGTTT+AGG 0.284721 8_4:+49064041 Msa1330030:CDS
TCTATAAGCATTGGGGCTAT+TGG 0.301858 8_4:+49064094 Msa1330030:CDS
TAAGACTGCCACCACGAAAT+TGG 0.308491 8_4:+49063870 Msa1330030:CDS
TTGGTTCTTCAAAGTCATTT+GGG 0.308872 8_4:+49064113 Msa1330030:CDS
GATGGAGGAAGAACCATCTT+TGG 0.330810 8_4:-49063740 None:intergenic
TGAGGATCCTGCTAAGTTTA+GGG 0.331108 8_4:+49064042 Msa1330030:CDS
TCCACTGCACTTGGCAAGTT+GGG 0.333885 8_4:-49065933 None:intergenic
TTGCGGCGGTGACATCTTAC+AGG 0.346131 8_4:-49063561 None:intergenic
AGCCAGCTAGAGGCACTTAT+TGG 0.353667 8_4:+49064146 Msa1330030:CDS
ACTTCACGAAAAGCCTTAAC+AGG 0.358557 8_4:+49065756 Msa1330030:CDS
ATTTGTACTAAGTTCAGATT+TGG 0.359410 8_4:+49073332 Msa1330030:CDS
TCAATCGTGTTTATGGTGAT+TGG 0.369324 8_4:+49065886 Msa1330030:CDS
ATCAAGGGAGATGTCCCTTT+GGG 0.372752 8_4:+49064197 Msa1330030:CDS
GCTAAGTTTAGGGATCATTC+TGG 0.384575 8_4:+49064052 Msa1330030:CDS
TTCAAAGTCATTTGGGGCTG+TGG 0.389237 8_4:+49064120 Msa1330030:CDS
ACGTGGTCTGCTCTGTTTGA+TGG 0.398666 8_4:-49063758 None:intergenic
ATCAACCCCATTCCTTCAAA+AGG 0.402198 8_4:+49063669 Msa1330030:CDS
AGTGTTCTTCTATAAGCATT+GGG 0.403399 8_4:+49064086 Msa1330030:CDS
TTACAGGTTGGAATATTGTC+TGG 0.446583 8_4:-49063545 None:intergenic
CTGAGGCGGTGACATCTTAG+AGG 0.449778 8_4:-49073180 None:intergenic
TTAAGAAGATGCATTTACTT+TGG 0.454114 8_4:+49065847 Msa1330030:CDS
CTCCACTGCACTTGGCAAGT+TGG 0.458746 8_4:-49065934 None:intergenic
ATCATTGGCAGAACCTGTTA+AGG 0.460853 8_4:-49065769 None:intergenic
CATCAAGGGAGATGTCCCTT+TGG 0.465946 8_4:+49064196 Msa1330030:CDS
ACAAATTGCAACTTTGCTCA+TGG 0.469357 8_4:+49073371 Msa1330030:CDS
TGCCACAAGTCTTGCAGGGA+AGG 0.471441 8_4:-49065808 None:intergenic
CTGATCTGTTTGATTGAGGA+AGG 0.475163 8_4:-49073286 None:intergenic
ACAGCAGCAGCTGAGAAATT+GGG 0.480050 8_4:+49063925 Msa1330030:CDS
CCCTGCAAGACTTGTGGCAA+AGG 0.480562 8_4:+49065812 Msa1330030:CDS
GGTAGGTGCATATGCATCAT+TGG 0.482923 8_4:-49065784 None:intergenic
GATATGCCCTCCTCCAAAGA+TGG 0.484001 8_4:+49063727 Msa1330030:CDS
CTAAGTTTAGGGATCATTCT+GGG 0.485241 8_4:+49064053 Msa1330030:CDS
TGCTGTCCGTCGCTGCTGCA+AGG 0.486679 8_4:-49063908 None:intergenic
AAAGATTGCAACTTTGCTCA+TGG 0.488168 8_4:+49063836 Msa1330030:CDS
CTCATGGGGCTGAAGAGATA+AGG 0.488249 8_4:+49073387 Msa1330030:CDS
CAAATTGCAACTTTGCTCAT+GGG 0.490368 8_4:+49073372 Msa1330030:CDS
GTTTCTACAAGTACCAAGTC+TGG 0.493005 8_4:-49063810 None:intergenic
GATTGAGGAAGGGTCATCCT+TGG 0.496966 8_4:-49073275 None:intergenic
AAGATTGCAACTTTGCTCAT+GGG 0.501520 8_4:+49063837 Msa1330030:CDS
TTCCAATAAGTGCCTCTAGC+TGG 0.502818 8_4:-49064148 None:intergenic
TTCACAAGATGAAGCTATGC+AGG 0.506731 8_4:+49063966 Msa1330030:CDS
CAATTTGCTCATGGAGAAGC+AGG 0.507401 8_4:+49064229 Msa1330030:CDS
ATCTCCCTTGATGCTGCCAA+TGG 0.509822 8_4:-49064186 None:intergenic
AGACTAAGACGTGTTTCCAT+TGG 0.510007 8_4:+49064170 Msa1330030:CDS
GAATGATCCCTAAACTTAGC+AGG 0.515278 8_4:-49064049 None:intergenic
GAGTGTTCTTCTATAAGCAT+TGG 0.515583 8_4:+49064085 Msa1330030:CDS
GTTTCCATTGGCAGCATCAA+GGG 0.516368 8_4:+49064182 Msa1330030:CDS
AGACTTGGTACTTGTAGAAA+CGG 0.521320 8_4:+49063812 Msa1330030:CDS
GAGGACTGTCAATTTGCTCA+TGG 0.526443 8_4:+49064220 Msa1330030:CDS
AAGACTTGTGGCAAAGGAAG+AGG 0.529531 8_4:+49065818 Msa1330030:CDS
GGAAGGGTCATCCTTGGAGG+AGG 0.531078 8_4:-49073269 None:intergenic
GGCGGTGACATCTTAGAGGT+TGG 0.533133 8_4:-49073176 None:intergenic
TGTTTCCATTGGCAGCATCA+AGG 0.535568 8_4:+49064181 Msa1330030:CDS
TGTGGCAAAGGAAGAGGAGC+AGG 0.535571 8_4:+49065824 Msa1330030:CDS
ACTAGCTCCTGCCAATTTCG+TGG 0.541649 8_4:-49063881 None:intergenic
AACAATGACTTCAAAAGAGA+AGG 0.542813 8_4:+49073218 Msa1330030:CDS
TGGTTCTTCAAAGTCATTTG+GGG 0.545756 8_4:+49064114 Msa1330030:CDS
CCTTTGCCACAAGTCTTGCA+GGG 0.547135 8_4:-49065812 None:intergenic
AGATTGCAACTTTGCTCATG+GGG 0.548831 8_4:+49063838 Msa1330030:CDS
AAATTGCAACTTTGCTCATG+GGG 0.550865 8_4:+49073373 Msa1330030:CDS
AGGAGGGCATATCAAAGCAT+TGG 0.555491 8_4:-49063717 None:intergenic
AGGAGGGCATATCAATGCAT+TGG 0.555491 8_4:-49073252 None:intergenic
TGAGGAAGGGTCATCCTTGG+AGG 0.556539 8_4:-49073272 None:intergenic
ACTGCCACCACGAAATTGGC+AGG 0.556769 8_4:+49063874 Msa1330030:CDS
CATTGATATGCCCTCCTCCA+AGG 0.556864 8_4:+49073258 Msa1330030:CDS
GGAAGAACCATCTTTGGAGG+AGG 0.559899 8_4:-49063734 None:intergenic
AATTGACAGTCCTCCCCAAA+GGG 0.560613 8_4:-49064211 None:intergenic
TCAACCCCATTCCTTCAAAA+GGG 0.563397 8_4:+49063670 Msa1330030:CDS
GGAGGAAGAACCATCTTTGG+AGG 0.566069 8_4:-49063737 None:intergenic
CACCTTCCCTGCAAGACTTG+TGG 0.570439 8_4:+49065806 Msa1330030:CDS
TGGTCTGATCTGTTTGATTG+AGG 0.571695 8_4:-49073290 None:intergenic
GTCTGTAATAAGTCCAGACT+TGG 0.573982 8_4:+49063797 Msa1330030:CDS
CACAAGTCTTGCAGGGAAGG+TGG 0.574444 8_4:-49065805 None:intergenic
GTTAGTCCTTGCAGCAGCGA+CGG 0.584359 8_4:+49063902 Msa1330030:CDS
AGTCTTGCAGGGAAGGTGGT+AGG 0.597135 8_4:-49065801 None:intergenic
GGCGGTGACATCTTACAGGT+TGG 0.597501 8_4:-49063557 None:intergenic
GGCAAGTTGGGAAGAACAAG+AGG 0.612688 8_4:-49065921 None:intergenic
TGATCTGTTTGATTGAGGAA+GGG 0.618914 8_4:-49073285 None:intergenic
GAAGGGTCATCCTTGGAGGA+GGG 0.622595 8_4:-49073268 None:intergenic
GCTGTGGACAAGCCAGCTAG+AGG 0.623188 8_4:+49064136 Msa1330030:CDS
AAATTGACAGTCCTCCCCAA+AGG 0.626382 8_4:-49064212 None:intergenic
CTGTTTGATGTAGTGAATTG+CGG 0.628943 8_4:-49063578 None:intergenic
GAAGAACCATCTTTGGAGGA+GGG 0.630074 8_4:-49063733 None:intergenic
TTCAATGAAGAGAACTGAGG+CGG 0.637828 8_4:-49073194 None:intergenic
AGGGAGATGTCCCTTTGGGG+AGG 0.652421 8_4:+49064201 Msa1330030:CDS
GTGTTCTTCTATAAGCATTG+GGG 0.654358 8_4:+49064087 Msa1330030:CDS
TGGTCTGCTCTGTTTGATGG+AGG 0.659565 8_4:-49063755 None:intergenic
TCAAGGGAGATGTCCCTTTG+GGG 0.666746 8_4:+49064198 Msa1330030:CDS
AGCTCCTGCCAATTTCGTGG+TGG 0.669372 8_4:-49063878 None:intergenic
GCAGCAGCTGAGAAATTGGG+AGG 0.680326 8_4:+49063928 Msa1330030:CDS
TTTGATGTAGTGAATTGCGG+CGG 0.699237 8_4:-49063575 None:intergenic
AATATTGTCTGGAAGAACCA+TGG 0.708668 8_4:-49063534 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGCAATATATATTAAAAAA+AGG - chr8_4:49065588-49065607 None:intergenic 10.0%
!! TTATATATCAAATCATATAT+TGG + chr8_4:49066321-49066340 Msa1330030:intron 10.0%
!!! TTTTAGTTTTTAACATTTAT+TGG + chr8_4:49069085-49069104 Msa1330030:intron 10.0%
!!! TAAATTTAAAATTTAACAAC+AGG - chr8_4:49069892-49069911 None:intergenic 10.0%
!!! TTTATATTATTTTTTTGTAG+AGG + chr8_4:49071225-49071244 Msa1330030:intron 10.0%
!!! TTTTTTTTTTTTTTGAAGAA+TGG + chr8_4:49071693-49071712 Msa1330030:intron 10.0%
!! ATATATTTATGTAAAATAAG+TGG - chr8_4:49071725-49071744 None:intergenic 10.0%
!! TTATAAATACGTAAAATAAT+TGG + chr8_4:49071781-49071800 Msa1330030:intron 10.0%
!!! TCAAAAAATATATATTTTGA+CGG + chr8_4:49072006-49072025 Msa1330030:intron 10.0%
!! TAACATTAATCAAATAATAA+TGG + chr8_4:49072103-49072122 Msa1330030:intron 10.0%
!! CAAAATCAATAATCAAAATA+GGG - chr8_4:49064290-49064309 None:intergenic 15.0%
!!! ATCCATTTACAAATTTTTTA+TGG - chr8_4:49064840-49064859 None:intergenic 15.0%
!!! TTAATCATCTCAATTTTATA+AGG + chr8_4:49065058-49065077 Msa1330030:intron 15.0%
!! AAAAGATGAATATAACATAA+TGG - chr8_4:49065345-49065364 None:intergenic 15.0%
!!! TTTTAACAATTTAAACTGTT+TGG + chr8_4:49065661-49065680 Msa1330030:intron 15.0%
!! ATTAACAGTAAAATAGAAAA+AGG - chr8_4:49066096-49066115 None:intergenic 15.0%
!!! TTTTCTATTTTACTGTTAAT+TGG + chr8_4:49066096-49066115 Msa1330030:intron 15.0%
!!! AATTCACTTTTAAATTTTGA+AGG - chr8_4:49066892-49066911 None:intergenic 15.0%
!! ATTGACATTTATAAAATTCA+AGG - chr8_4:49067583-49067602 None:intergenic 15.0%
!! TTATTCATTAAAAATCAAGT+TGG + chr8_4:49067791-49067810 Msa1330030:intron 15.0%
!!! AACTTGTTTATAGTATTTTT+GGG - chr8_4:49068033-49068052 None:intergenic 15.0%
!!! TAACTTGTTTATAGTATTTT+TGG - chr8_4:49068034-49068053 None:intergenic 15.0%
!!! ATATAGATTTAAAACTACAA+TGG - chr8_4:49068170-49068189 None:intergenic 15.0%
!!! AAGTTTAAGTGTTATTTATT+AGG + chr8_4:49068999-49069018 Msa1330030:intron 15.0%
!! TTATTCATTAAAAATCAAGT+TGG - chr8_4:49067791-49067810 None:intergenic 15.0%
!!! GATTTTTAATGAATAATTCA+AGG + chr8_4:49069191-49069210 Msa1330030:intron 15.0%
!!! TTATATTATTTTACGAGTAT+TGG + chr8_4:49070453-49070472 Msa1330030:intron 15.0%
!! ATAAAAAATCAAACACAAAT+GGG + chr8_4:49070485-49070504 Msa1330030:intron 15.0%
!! AATAGTGATAAAAAAATACA+TGG - chr8_4:49071539-49071558 None:intergenic 15.0%
!!! TTATTTTTTAAATATAGAGG+AGG + chr8_4:49071588-49071607 Msa1330030:intron 15.0%
!! TCTTCAAAAAAAAAAAAAAG+TGG - chr8_4:49071692-49071711 None:intergenic 15.0%
!! AATACAACATTAATTAACAA+GGG - chr8_4:49072203-49072222 None:intergenic 15.0%
!! AAATACAACATTAATTAACA+AGG - chr8_4:49072204-49072223 None:intergenic 15.0%
!! AATAATCAAAATAGGGAAAA+GGG - chr8_4:49064283-49064302 None:intergenic 20.0%
!! CCAAAATCAATAATCAAAAT+AGG - chr8_4:49064291-49064310 None:intergenic 20.0%
!!! CCTATTTTGATTATTGATTT+TGG + chr8_4:49064288-49064307 Msa1330030:intron 20.0%
!! ATATGATGTTCAAATTATAG+TGG + chr8_4:49064404-49064423 Msa1330030:intron 20.0%
!! AGCCATAAAAAATTTGTAAA+TGG + chr8_4:49064835-49064854 Msa1330030:intron 20.0%
!!! GTGTTTATATGTTGTATTTT+TGG + chr8_4:49064893-49064912 Msa1330030:intron 20.0%
!!! TATTTTTATGTATTGGATCA+CGG - chr8_4:49065301-49065320 None:intergenic 20.0%
!!! TCACATGTATTTTTATGTAT+TGG - chr8_4:49065308-49065327 None:intergenic 20.0%
!! AATAGAAAAAGGAAAAAAAG+AGG - chr8_4:49066085-49066104 None:intergenic 20.0%
!! AATTCAAACAAATTAAGATC+GGG - chr8_4:49066681-49066700 None:intergenic 20.0%
!! CAATTCAAACAAATTAAGAT+CGG - chr8_4:49066682-49066701 None:intergenic 20.0%
!!! AAATATCATCTAAAGTAAAG+TGG - chr8_4:49067214-49067233 None:intergenic 20.0%
!! TATGTGTCAATATTGATAAA+TGG + chr8_4:49067401-49067420 Msa1330030:intron 20.0%
!!! ACTTTATAAAAGTGTTATGT+CGG + chr8_4:49068111-49068130 Msa1330030:intron 20.0%
!! TGTATCAAATCTAAAAATGA+AGG + chr8_4:49068739-49068758 Msa1330030:intron 20.0%
!! GTATCAAATCTAAAAATGAA+GGG + chr8_4:49068740-49068759 Msa1330030:intron 20.0%
!! AAAACATGTACAATAAGAAA+AGG + chr8_4:49068867-49068886 Msa1330030:intron 20.0%
!!! GATTCTAAAGTCATAAAATT+TGG - chr8_4:49068950-49068969 None:intergenic 20.0%
!! ACTTATTGTTTAATTCTTTG+AGG - chr8_4:49068983-49069002 None:intergenic 20.0%
!!! TTTAAGTGTTATTTATTAGG+AGG + chr8_4:49069002-49069021 Msa1330030:intron 20.0%
!! AATTGACATTTATAAAATCC+AGG + chr8_4:49069415-49069434 Msa1330030:intron 20.0%
!! ATTGACATTTATAAAATCCA+GGG + chr8_4:49069416-49069435 Msa1330030:intron 20.0%
!! AAAAAACAAAATCAATTTGG+TGG - chr8_4:49069623-49069642 None:intergenic 20.0%
!! GTCAAAAAACAAAATCAATT+TGG - chr8_4:49069626-49069645 None:intergenic 20.0%
!! CAAACTTTGGATTAAATTAA+TGG - chr8_4:49070129-49070148 None:intergenic 20.0%
!! AAATCTTGTCATATAGATAT+GGG - chr8_4:49070253-49070272 None:intergenic 20.0%
!! CATAAAAAATCAAACACAAA+TGG + chr8_4:49070484-49070503 Msa1330030:intron 20.0%
!!! ATATATGACAAAAAGTATCT+GGG - chr8_4:49070513-49070532 None:intergenic 20.0%
!!! AATATATGACAAAAAGTATC+TGG - chr8_4:49070514-49070533 None:intergenic 20.0%
!!! TTTTTGTCATATATTGTTTG+AGG + chr8_4:49070519-49070538 Msa1330030:intron 20.0%
!!! TGTTTTTGAAGATATAGTTT+AGG - chr8_4:49071009-49071028 None:intergenic 20.0%
!!! CATTAAGATTTAAGATTCAA+GGG - chr8_4:49071078-49071097 None:intergenic 20.0%
!!! ACATTAAGATTTAAGATTCA+AGG - chr8_4:49071079-49071098 None:intergenic 20.0%
!! ACAACATGCAAAAAAATATA+TGG - chr8_4:49071179-49071198 None:intergenic 20.0%
!! TAACACTTCAATTCAAAAAT+TGG + chr8_4:49071805-49071824 Msa1330030:intron 20.0%
!! ACTTCGTTAACAAAAAAAAA+AGG - chr8_4:49071848-49071867 None:intergenic 20.0%
!! TTGCTCATTTGTATTTATTT+AGG + chr8_4:49072038-49072057 Msa1330030:intron 20.0%
!! TGCTCATTTGTATTTATTTA+GGG + chr8_4:49072039-49072058 Msa1330030:intron 20.0%
!!! TCATTTTTGTCTTGTTTTAT+TGG + chr8_4:49072614-49072633 Msa1330030:intron 20.0%
!!! CATTTTTGTCTTGTTTTATT+GGG + chr8_4:49072615-49072634 Msa1330030:intron 20.0%
! TCCAATGAAAAATGAAAACT+TGG + chr8_4:49063628-49063647 Msa1330030:CDS 25.0%
!!! TCCAAGTTTTCATTTTTCAT+TGG - chr8_4:49063632-49063651 None:intergenic 25.0%
!!! TAAGTGTTATTTTCTTCATG+AGG + chr8_4:49064024-49064043 Msa1330030:CDS 25.0%
! CAATAATCAAAATAGGGAAA+AGG - chr8_4:49064284-49064303 None:intergenic 25.0%
! AAAACTGTGTTGTCAAATAT+CGG + chr8_4:49064514-49064533 Msa1330030:intron 25.0%
! AAAGATAAAGTAATCACTAG+TGG - chr8_4:49064680-49064699 None:intergenic 25.0%
!! TACATATCAGTGTTGTTAAA+TGG + chr8_4:49064773-49064792 Msa1330030:intron 25.0%
! TCAAATAGAAATTCCTAATG+TGG - chr8_4:49065006-49065025 None:intergenic 25.0%
! AAGGCATGATTACTATTAAA+TGG + chr8_4:49065077-49065096 Msa1330030:intron 25.0%
!!! TGACTGAAATTTTAGTAGTT+TGG + chr8_4:49065124-49065143 Msa1330030:intron 25.0%
!! TATATGTCGATGGATATTTT+GGG + chr8_4:49065268-49065287 Msa1330030:intron 25.0%
! TGAGTTAGACATCAAATTAT+AGG - chr8_4:49065414-49065433 None:intergenic 25.0%
! CATATTTGACTGCAATATTA+AGG - chr8_4:49065497-49065516 None:intergenic 25.0%
! CTTAATATTGCAGTCAAATA+TGG + chr8_4:49065495-49065514 Msa1330030:intron 25.0%
! TTAAGAAGATGCATTTACTT+TGG + chr8_4:49065847-49065866 Msa1330030:CDS 25.0%
!!! TGTTAATTGGTACAGTTTTT+TGG + chr8_4:49066109-49066128 Msa1330030:intron 25.0%
! TTGATATATAAACGACACAT+AGG - chr8_4:49066312-49066331 None:intergenic 25.0%
! TTCAAGATTCATTGCATTTA+TGG + chr8_4:49066569-49066588 Msa1330030:intron 25.0%
!! TGCATATTTTGTTAAACACA+TGG + chr8_4:49066642-49066661 Msa1330030:intron 25.0%
!! GCATATTTTGTTAAACACAT+GGG + chr8_4:49066643-49066662 Msa1330030:intron 25.0%
!! TTTTCTTACTAATGTCTTGT+TGG + chr8_4:49066708-49066727 Msa1330030:intron 25.0%
!!! TATAGAGGTTTTTAGTTTCA+TGG + chr8_4:49066754-49066773 Msa1330030:intron 25.0%
!!! ATAGAGGTTTTTAGTTTCAT+GGG + chr8_4:49066755-49066774 Msa1330030:intron 25.0%
!!! CTTTGTTTTTGTTGAATGAA+AGG - chr8_4:49066789-49066808 None:intergenic 25.0%
! TTGAGTAAGTTCTTCAATAT+TGG + chr8_4:49067339-49067358 Msa1330030:intron 25.0%
! AAGAAAAACTATGAGTGAAT+AGG + chr8_4:49067486-49067505 Msa1330030:intron 25.0%
! AGAAAAACTATGAGTGAATA+GGG + chr8_4:49067487-49067506 Msa1330030:intron 25.0%
! TTGGTACATACAAATTTGAA+GGG - chr8_4:49067520-49067539 None:intergenic 25.0%
! ATTGGTACATACAAATTTGA+AGG - chr8_4:49067521-49067540 None:intergenic 25.0%
! ATAGTGAGTGACATAATTTA+GGG - chr8_4:49067818-49067837 None:intergenic 25.0%
!! GCATTTATTTGATAGTATCA+AGG - chr8_4:49067883-49067902 None:intergenic 25.0%
!!! TTAGAGACTGATTTTCAAAT+AGG - chr8_4:49068090-49068109 None:intergenic 25.0%
!!! TAAAACTACAATGGTTTTGT+TGG - chr8_4:49068161-49068180 None:intergenic 25.0%
! GAATATACCTATATGTATGT+TGG + chr8_4:49068234-49068253 Msa1330030:intron 25.0%
!! AAGACAATCTCTTTTCTTTA+GGG - chr8_4:49068326-49068345 None:intergenic 25.0%
! AAATATGAAGGTGACTTAAT+GGG - chr8_4:49068477-49068496 None:intergenic 25.0%
!! TTTAAAGTTAGCCAATGATT+CGG + chr8_4:49069751-49069770 Msa1330030:intron 25.0%
!! TAAGCTTTCATCGTATTTTT+CGG - chr8_4:49069948-49069967 None:intergenic 25.0%
!! TCATCATTTTCAAAATCCTT+GGG - chr8_4:49070022-49070041 None:intergenic 25.0%
! GAGCTTACTAAAAAAACATT+TGG + chr8_4:49070040-49070059 Msa1330030:intron 25.0%
!!! TTTTGGTGTTTTTCAAACTT+TGG - chr8_4:49070142-49070161 None:intergenic 25.0%
! CAAATCTTGTCATATAGATA+TGG - chr8_4:49070254-49070273 None:intergenic 25.0%
!! ACTATTTAATCTTAGCTTGA+CGG - chr8_4:49070320-49070339 None:intergenic 25.0%
!!! CTCATACATTGATTTATGAT+CGG + chr8_4:49070377-49070396 Msa1330030:intron 25.0%
!!! TATATGACAAAAAGTATCTG+GGG - chr8_4:49070512-49070531 None:intergenic 25.0%
! TATATTGTTTGAGGAGTAAA+TGG + chr8_4:49070528-49070547 Msa1330030:intron 25.0%
! ATATTGTTTGAGGAGTAAAT+GGG + chr8_4:49070529-49070548 Msa1330030:intron 25.0%
! AAGTTTCTTAAAAGTCATGA+GGG - chr8_4:49070591-49070610 None:intergenic 25.0%
!! GATTTTGTTGACAGAATTTA+TGG - chr8_4:49070964-49070983 None:intergenic 25.0%
! ACATCATAAAATTGAGTAGA+AGG + chr8_4:49071032-49071051 Msa1330030:intron 25.0%
! TGAAAACCTTGAAATTGTTT+AGG + chr8_4:49071280-49071299 Msa1330030:intron 25.0%
! TCAATGTTCATAAAAAATGC+AGG - chr8_4:49071386-49071405 None:intergenic 25.0%
!!! GTTAATGCTTTGTATTTTTG+TGG - chr8_4:49071670-49071689 None:intergenic 25.0%
!!! ACCGAAATACTTTTTTTTAG+GGG - chr8_4:49071755-49071774 None:intergenic 25.0%
!!! GACCGAAATACTTTTTTTTA+GGG - chr8_4:49071756-49071775 None:intergenic 25.0%
!!! TGACCGAAATACTTTTTTTT+AGG - chr8_4:49071757-49071776 None:intergenic 25.0%
! CGTTAACAAAAAAAAAAGGA+TGG - chr8_4:49071844-49071863 None:intergenic 25.0%
! GAAATTTATGTTTCGAAAAG+TGG + chr8_4:49071883-49071902 Msa1330030:intron 25.0%
! ATTATTCACCATTCATTGAT+GGG - chr8_4:49072143-49072162 None:intergenic 25.0%
! AATTATTCACCATTCATTGA+TGG - chr8_4:49072144-49072163 None:intergenic 25.0%
!! TAATTTTACTCATGTTGAGT+TGG + chr8_4:49072159-49072178 Msa1330030:intron 25.0%
!! AAAAAGTGTGTTGAGTTATT+AGG + chr8_4:49072232-49072251 Msa1330030:intron 25.0%
!! AAAAGTGTGTTGAGTTATTA+GGG + chr8_4:49072233-49072252 Msa1330030:intron 25.0%
! TTTCAATACATTGAAGTTGA+GGG - chr8_4:49072306-49072325 None:intergenic 25.0%
! ATTTCAATACATTGAAGTTG+AGG - chr8_4:49072307-49072326 None:intergenic 25.0%
!! TAACTCAAAAGTAGCTATTT+TGG - chr8_4:49072594-49072613 None:intergenic 25.0%
!!! AAGTTTAAGGTTTTTTAGCT+GGG - chr8_4:49072684-49072703 None:intergenic 25.0%
!!! AAAGTTTAAGGTTTTTTAGC+TGG - chr8_4:49072685-49072704 None:intergenic 25.0%
!! TTCGTGTTTTGTAGAAAATA+TGG - chr8_4:49073313-49073332 None:intergenic 25.0%
! ATTTGTACTAAGTTCAGATT+TGG + chr8_4:49073332-49073351 Msa1330030:CDS 25.0%
!! TCATTTTTCATTGGAAATCG+AGG - chr8_4:49063623-49063642 None:intergenic 30.0%
AAAGAAACATTTCTCACCAT+TGG - chr8_4:49063999-49064018 None:intergenic 30.0%
AATGGTGAGAAATGTTTCTT+TGG + chr8_4:49063998-49064017 Msa1330030:intron 30.0%
AGTGTTCTTCTATAAGCATT+GGG + chr8_4:49064086-49064105 Msa1330030:CDS 30.0%
! ATTGGTTCTTCAAAGTCATT+TGG + chr8_4:49064112-49064131 Msa1330030:CDS 30.0%
! TTGGTTCTTCAAAGTCATTT+GGG + chr8_4:49064113-49064132 Msa1330030:CDS 30.0%
ATCATATAATTCTGCTGTAC+TGG + chr8_4:49064315-49064334 Msa1330030:intron 30.0%
! GCGTATGATATTTTCATGTT+TGG + chr8_4:49064452-49064471 Msa1330030:intron 30.0%
ACAACTGCTATGTTTATCTA+AGG + chr8_4:49064748-49064767 Msa1330030:intron 30.0%
CTTTATAGCTGATAACAGAA+AGG - chr8_4:49065169-49065188 None:intergenic 30.0%
TGTTATCAGCTATAAAGCAT+GGG + chr8_4:49065172-49065191 Msa1330030:intron 30.0%
CTTGTCGGATAAAAAAAAGT+AGG + chr8_4:49065231-49065250 Msa1330030:intron 30.0%
! GTATATGTCGATGGATATTT+TGG + chr8_4:49065267-49065286 Msa1330030:intron 30.0%
!! CTAACTCATCAATAGTTTTG+AGG + chr8_4:49065426-49065445 Msa1330030:intron 30.0%
CAATATTAAGGATTGTGACA+TGG - chr8_4:49065485-49065504 None:intergenic 30.0%
AACAAGATCAATCGTGTTTA+TGG + chr8_4:49065879-49065898 Msa1330030:CDS 30.0%
!! AATTTTGGAAACATGGTCAT+TGG + chr8_4:49066024-49066043 Msa1330030:intron 30.0%
!! ATTTTAACCTATTTGAACCC+TGG - chr8_4:49066242-49066261 None:intergenic 30.0%
TATTCTGATTCCCAAACTAA+GGG + chr8_4:49066508-49066527 Msa1330030:intron 30.0%
TGCAATGAATCTTGAAAACA+AGG - chr8_4:49066565-49066584 None:intergenic 30.0%
ATTCATTGCATTTATGGAGA+AGG + chr8_4:49066575-49066594 Msa1330030:intron 30.0%
! GTTGCAGTTAGTTTATATAG+AGG + chr8_4:49066739-49066758 Msa1330030:intron 30.0%
!!! TAGAGGTTTTTAGTTTCATG+GGG + chr8_4:49066756-49066775 Msa1330030:intron 30.0%
CCAATTGTAAATGACTTCTT+TGG - chr8_4:49067068-49067087 None:intergenic 30.0%
CCAAAGAAGTCATTTACAAT+TGG + chr8_4:49067065-49067084 Msa1330030:intron 30.0%
AGAAGTCATTTACAATTGGA+TGG + chr8_4:49067069-49067088 Msa1330030:intron 30.0%
CTAGAACCTTATGTTTGATA+AGG + chr8_4:49067099-49067118 Msa1330030:intron 30.0%
ACCTTATGTTTGATAAGGTT+TGG + chr8_4:49067104-49067123 Msa1330030:intron 30.0%
!! AATGGACTAAACAGAATCAA+AGG + chr8_4:49067133-49067152 Msa1330030:intron 30.0%
ATTCTACTATATGTTGCCTT+CGG + chr8_4:49067265-49067284 Msa1330030:intron 30.0%
AATCACGAGTTTAACAATCT+TGG - chr8_4:49067319-49067338 None:intergenic 30.0%
!! TCAATATTGGCTTACATGAA+TGG + chr8_4:49067352-49067371 Msa1330030:intron 30.0%
TGATTGACAACACCAAAAAA+AGG - chr8_4:49067430-49067449 None:intergenic 30.0%
TGGTACATACAAATTTGAAG+GGG - chr8_4:49067519-49067538 None:intergenic 30.0%
ATCGAGGGATGAAAATTAAT+TGG - chr8_4:49067539-49067558 None:intergenic 30.0%
!! TTGCTATTTCGAAAAATCGA+GGG - chr8_4:49067554-49067573 None:intergenic 30.0%
!! TTTGCTATTTCGAAAAATCG+AGG - chr8_4:49067555-49067574 None:intergenic 30.0%
GATAGTGAGTGACATAATTT+AGG - chr8_4:49067819-49067838 None:intergenic 30.0%
! TGGTTTGTCATAAACTAAGT+AGG - chr8_4:49068141-49068160 None:intergenic 30.0%
! CAAGACAATCTCTTTTCTTT+AGG - chr8_4:49068327-49068346 None:intergenic 30.0%
! GATGATATTTTGTGTTTTGC+AGG - chr8_4:49068353-49068372 None:intergenic 30.0%
ATTATGCATGGATAATTGTC+TGG - chr8_4:49068392-49068411 None:intergenic 30.0%
AACACATGTGTAATTATGCA+TGG - chr8_4:49068404-49068423 None:intergenic 30.0%
! TTTTACATGTTGAAGAACCA+TGG + chr8_4:49068422-49068441 Msa1330030:intron 30.0%
GAAATATGAAGGTGACTTAA+TGG - chr8_4:49068478-49068497 None:intergenic 30.0%
AGTACGAATGTGAAATATGA+AGG - chr8_4:49068489-49068508 None:intergenic 30.0%
!! CACTTTTAAAAATCGGTTCA+TGG - chr8_4:49068605-49068624 None:intergenic 30.0%
!! CCAGCTACACTTTTAAAAAT+CGG - chr8_4:49068612-49068631 None:intergenic 30.0%
! AAGAAGAGTTAGACTTTTGT+CGG - chr8_4:49068656-49068675 None:intergenic 30.0%
CACTTCAGAGTTTAAATTAC+CGG + chr8_4:49068679-49068698 Msa1330030:intron 30.0%
AATTCGGTTAATGCAAATAC+CGG - chr8_4:49068701-49068720 None:intergenic 30.0%
GCGTATTGTTTAATTAGAAG+CGG - chr8_4:49068837-49068856 None:intergenic 30.0%
!! ATTATTCCTAACTTGTTCCT+TGG + chr8_4:49069048-49069067 Msa1330030:intron 30.0%
!! TTATTCCTAACTTGTTCCTT+GGG + chr8_4:49069049-49069068 Msa1330030:intron 30.0%
AAAAATGTGAAGAATTCCCA+AGG - chr8_4:49069068-49069087 None:intergenic 30.0%
!!! TTAACGATGAGACTTTTTTG+AGG + chr8_4:49069356-49069375 Msa1330030:intron 30.0%
!!! TAACGATGAGACTTTTTTGA+GGG + chr8_4:49069357-49069376 Msa1330030:intron 30.0%
AATTTAACGATGAGACTTGA+CGG + chr8_4:49069380-49069399 Msa1330030:intron 30.0%
GATCTGTGCATATAAATTTG+AGG + chr8_4:49069476-49069495 Msa1330030:intron 30.0%
TTCACTCGAAAAACTATTCT+AGG + chr8_4:49069512-49069531 Msa1330030:intron 30.0%
TAGAATATTGATCACACTCT+TGG - chr8_4:49069568-49069587 None:intergenic 30.0%
CAATATTCTAGTCAGTTGTA+CGG + chr8_4:49069578-49069597 Msa1330030:intron 30.0%
AATATTCTAGTCAGTTGTAC+GGG + chr8_4:49069579-49069598 Msa1330030:intron 30.0%
! AACAAAATCAATTTGGTGGT+TGG - chr8_4:49069619-49069638 None:intergenic 30.0%
CATTTGCATCTGTGATATAT+CGG + chr8_4:49069661-49069680 Msa1330030:intron 30.0%
ATTTGCATCTGTGATATATC+GGG + chr8_4:49069662-49069681 Msa1330030:intron 30.0%
AACAACAGGATCATAGAAAA+GGG - chr8_4:49069878-49069897 None:intergenic 30.0%
TAACAACAGGATCATAGAAA+AGG - chr8_4:49069879-49069898 None:intergenic 30.0%
! AAGCTTTCATCGTATTTTTC+GGG - chr8_4:49069947-49069966 None:intergenic 30.0%
! CTTATCATAAAGCATCATGA+AGG + chr8_4:49069964-49069983 Msa1330030:intron 30.0%
GTATAGTAAATTACATCCCA+AGG + chr8_4:49070003-49070022 Msa1330030:intron 30.0%
! CTCATCATTTTCAAAATCCT+TGG - chr8_4:49070023-49070042 None:intergenic 30.0%
AAATTGGTTAAGCTTGTGTT+GGG - chr8_4:49070189-49070208 None:intergenic 30.0%
!! CTATATGACAAGATTTGCTA+CGG + chr8_4:49070257-49070276 Msa1330030:intron 30.0%
TTGGATTGTATACGTTCTTA+CGG - chr8_4:49070414-49070433 None:intergenic 30.0%
TTGACGAAAGTTACAATTTC+AGG - chr8_4:49070565-49070584 None:intergenic 30.0%
GAAGTTTCTTAAAAGTCATG+AGG - chr8_4:49070592-49070611 None:intergenic 30.0%
AACGTTTGACAATTTCATGA+GGG - chr8_4:49070620-49070639 None:intergenic 30.0%
TAACGTTTGACAATTTCATG+AGG - chr8_4:49070621-49070640 None:intergenic 30.0%
TAACAGCCAAAACAAATAGA+GGG - chr8_4:49070655-49070674 None:intergenic 30.0%
TTAACAGCCAAAACAAATAG+AGG - chr8_4:49070656-49070675 None:intergenic 30.0%
ATAAAATTCAGCCAATGTGA+AGG - chr8_4:49070709-49070728 None:intergenic 30.0%
! TGAATTTTATGTCACGTCAT+AGG + chr8_4:49070719-49070738 Msa1330030:intron 30.0%
! GAATTTTATGTCACGTCATA+GGG + chr8_4:49070720-49070739 Msa1330030:intron 30.0%
! AATTTTATGTCACGTCATAG+GGG + chr8_4:49070721-49070740 Msa1330030:intron 30.0%
! ATGATGATGTTGTTGTTGAT+AGG - chr8_4:49070864-49070883 None:intergenic 30.0%
!!! TTTTTGTTGATTAGCTTAGG+TGG - chr8_4:49070926-49070945 None:intergenic 30.0%
!!! GGATTTTTGTTGATTAGCTT+AGG - chr8_4:49070929-49070948 None:intergenic 30.0%
TTTGTTGACAGAATTTATGG+AGG - chr8_4:49070961-49070980 None:intergenic 30.0%
! TTTCAAGGTTTTCATCATCA+AGG - chr8_4:49071274-49071293 None:intergenic 30.0%
CATGATCCTAAACAATTTCA+AGG - chr8_4:49071289-49071308 None:intergenic 30.0%
! CTTGAAATTGTTTAGGATCA+TGG + chr8_4:49071287-49071306 Msa1330030:intron 30.0%
ATGAGTAAATAGGCAAAAAG+TGG - chr8_4:49071483-49071502 None:intergenic 30.0%
GTCTCAAACAATGAGTAAAT+AGG - chr8_4:49071493-49071512 None:intergenic 30.0%
!!! CCGAAATACTTTTTTTTAGG+GGG - chr8_4:49071754-49071773 None:intergenic 30.0%
!! CCCCCTAAAAAAAAGTATTT+CGG + chr8_4:49071751-49071770 Msa1330030:intron 30.0%
CTTATTTACCCATCAATGAA+TGG + chr8_4:49072132-49072151 Msa1330030:intron 30.0%
TCACAATAACTCTTCATGTA+TGG - chr8_4:49072471-49072490 None:intergenic 30.0%
!!! AGTTTAAGGTTTTTTAGCTG+GGG - chr8_4:49072683-49072702 None:intergenic 30.0%
! TTGGTTATTGTTTTCAGTGT+TGG - chr8_4:49072748-49072767 None:intergenic 30.0%
GGATGAGATGATCAAAAATT+TGG - chr8_4:49072767-49072786 None:intergenic 30.0%
TCAAATTGCATGTCACTATT+TGG + chr8_4:49073053-49073072 Msa1330030:intron 30.0%
AATTTCTTTGACAACAACCA+TGG + chr8_4:49073136-49073155 Msa1330030:intron 30.0%
!! TTTTTCAATGAAGAGAACTG+AGG - chr8_4:49073200-49073219 None:intergenic 30.0%
AACAATGACTTCAAAAGAGA+AGG + chr8_4:49073218-49073237 Msa1330030:CDS 30.0%
! TTACAGGTTGGAATATTGTC+TGG - chr8_4:49063548-49063567 None:intergenic 35.0%
CTGTTTGATGTAGTGAATTG+CGG - chr8_4:49063581-49063600 None:intergenic 35.0%
! AGAAATTCTTGCCCTTTTGA+AGG - chr8_4:49063684-49063703 None:intergenic 35.0%
! AGACTTGGTACTTGTAGAAA+CGG + chr8_4:49063812-49063831 Msa1330030:CDS 35.0%
AAAGATTGCAACTTTGCTCA+TGG + chr8_4:49063836-49063855 Msa1330030:CDS 35.0%
AAGATTGCAACTTTGCTCAT+GGG + chr8_4:49063837-49063856 Msa1330030:CDS 35.0%
CTAAGTTTAGGGATCATTCT+GGG + chr8_4:49064053-49064072 Msa1330030:CDS 35.0%
GAGTGTTCTTCTATAAGCAT+TGG + chr8_4:49064085-49064104 Msa1330030:CDS 35.0%
! GTGTTCTTCTATAAGCATTG+GGG + chr8_4:49064087-49064106 Msa1330030:CDS 35.0%
TGGTTCTTCAAAGTCATTTG+GGG + chr8_4:49064114-49064133 Msa1330030:CDS 35.0%
CATAACCATCCTTCACAAAT+TGG - chr8_4:49064574-49064593 None:intergenic 35.0%
TAAACCAGTGTTAACGATGA+CGG - chr8_4:49064646-49064665 None:intergenic 35.0%
TCTTTGTGTTCAAATTTCCG+TGG + chr8_4:49064695-49064714 Msa1330030:intron 35.0%
! ATATCAATGTGTTGCTACCA+CGG - chr8_4:49064715-49064734 None:intergenic 35.0%
GGATCGTTAAATATACTGGA+AGG - chr8_4:49064919-49064938 None:intergenic 35.0%
TGGAGGATCGTTAAATATAC+TGG - chr8_4:49064923-49064942 None:intergenic 35.0%
GTATATTTAACGATCCTCCA+TGG + chr8_4:49064923-49064942 Msa1330030:intron 35.0%
! ATTTTCGTGTCAACCACATT+AGG + chr8_4:49064990-49065009 Msa1330030:intron 35.0%
CTGTTATCAGCTATAAAGCA+TGG + chr8_4:49065171-49065190 Msa1330030:intron 35.0%
!! TAGGTATCGAAATTGCTTGT+CGG + chr8_4:49065216-49065235 Msa1330030:intron 35.0%
AGGAAAAGGAAAAACAGGTT+TGG - chr8_4:49065368-49065387 None:intergenic 35.0%
CCAAAAGGAAAAGGAAAAAC+AGG - chr8_4:49065373-49065392 None:intergenic 35.0%
!! CCTGTTTTTCCTTTTCCTTT+TGG + chr8_4:49065370-49065389 Msa1330030:intron 35.0%
ATGAGTCAGAATACGATACA+TGG - chr8_4:49065690-49065709 None:intergenic 35.0%
TCAATCGTGTTTATGGTGAT+TGG + chr8_4:49065886-49065905 Msa1330030:CDS 35.0%
AGAATCCTTATCCAGATGAA+GGG - chr8_4:49065991-49066010 None:intergenic 35.0%
TAGAATCCTTATCCAGATGA+AGG - chr8_4:49065992-49066011 None:intergenic 35.0%
TGTTTCCAAAATTCTGTCTG+TGG - chr8_4:49066017-49066036 None:intergenic 35.0%
!! CAGACAGAATTTTGGAAACA+TGG + chr8_4:49066017-49066036 Msa1330030:intron 35.0%
! TCGATGGATCAGAAACTTTT+TGG + chr8_4:49066170-49066189 Msa1330030:intron 35.0%
! CGATGGATCAGAAACTTTTT+GGG + chr8_4:49066171-49066190 Msa1330030:intron 35.0%
! GATGGATCAGAAACTTTTTG+GGG + chr8_4:49066172-49066191 Msa1330030:intron 35.0%
! ATGGATCAGAAACTTTTTGG+GGG + chr8_4:49066173-49066192 Msa1330030:intron 35.0%
AAATTTCTGAACCAAAGTCC+AGG + chr8_4:49066221-49066240 Msa1330030:intron 35.0%
AATTTCTGAACCAAAGTCCA+GGG + chr8_4:49066222-49066241 Msa1330030:intron 35.0%
! CTTCGATTGTTTTCTTCTTG+TGG + chr8_4:49066344-49066363 Msa1330030:intron 35.0%
TTCTTGTGGATGTATCCTAA+GGG + chr8_4:49066358-49066377 Msa1330030:intron 35.0%
TTTGCTTATGCTTCCAAAGT+TGG + chr8_4:49066401-49066420 Msa1330030:intron 35.0%
ATGTTCTTGATTCTGAGTTG+TGG + chr8_4:49066435-49066454 Msa1330030:intron 35.0%
!!! GAGTTGTGGTGATTTTTTCA+TGG + chr8_4:49066449-49066468 Msa1330030:intron 35.0%
TTCATGGTCTAAAAATCGCT+TGG + chr8_4:49066465-49066484 Msa1330030:intron 35.0%
CTAAAAATCGCTTGGAGTAA+AGG + chr8_4:49066473-49066492 Msa1330030:intron 35.0%
GTATTCTGATTCCCAAACTA+AGG + chr8_4:49066507-49066526 Msa1330030:intron 35.0%
! AACAAGGATGTAAGAAGCAT+GGG - chr8_4:49066549-49066568 None:intergenic 35.0%
AAACAAGGATGTAAGAAGCA+TGG - chr8_4:49066550-49066569 None:intergenic 35.0%
! TCTTACTAATGTCTTGTTGG+CGG + chr8_4:49066711-49066730 Msa1330030:intron 35.0%
! TTTGAGACTAGACTCGTTTA+TGG + chr8_4:49066973-49066992 Msa1330030:intron 35.0%
GCCAAACCTTATCAAACATA+AGG - chr8_4:49067108-49067127 None:intergenic 35.0%
!! GATAAGGTTTGGCTTTAGAA+TGG + chr8_4:49067115-49067134 Msa1330030:intron 35.0%
AAACAGAATCAAAGGCCTTA+TGG + chr8_4:49067141-49067160 Msa1330030:intron 35.0%
TTCTTCGTTCATTAGCAACT+TGG - chr8_4:49067180-49067199 None:intergenic 35.0%
AGTTGCTAATGAACGAAGAA+AGG + chr8_4:49067180-49067199 Msa1330030:intron 35.0%
GGCAACATATAGTAGAATCT+GGG - chr8_4:49067263-49067282 None:intergenic 35.0%
AGGCAACATATAGTAGAATC+TGG - chr8_4:49067264-49067283 None:intergenic 35.0%
TTCTACTATATGTTGCCTTC+GGG + chr8_4:49067266-49067285 Msa1330030:intron 35.0%
! GTGAGGATATTACAGAGTTT+TGG + chr8_4:49067292-49067311 Msa1330030:intron 35.0%
!!! GATAAATGGACGCCTTTTTT+TGG + chr8_4:49067415-49067434 Msa1330030:intron 35.0%
AAAATTTGAGCACACATCAG+TGG + chr8_4:49068198-49068217 Msa1330030:intron 35.0%
! TCAACGACAGATTTTACCAA+TGG - chr8_4:49068265-49068284 None:intergenic 35.0%
!!! GAACCATGGAAGTATTTTAG+AGG + chr8_4:49068436-49068455 Msa1330030:intron 35.0%
!! TTGCCTCTAAAATACTTCCA+TGG - chr8_4:49068442-49068461 None:intergenic 35.0%
!! CCGATTTTTAAAAGTGTAGC+TGG + chr8_4:49068609-49068628 Msa1330030:intron 35.0%
TTTGACAGTGTAACAATCTG+TGG + chr8_4:49069219-49069238 Msa1330030:intron 35.0%
AGAGTAATTAGCCGAATCAT+TGG - chr8_4:49069765-49069784 None:intergenic 35.0%
!!! TAATGGCGTGTTTGTTTTTG+TGG - chr8_4:49070112-49070131 None:intergenic 35.0%
GAAAAACACCAAAATCAGTG+AGG + chr8_4:49070148-49070167 Msa1330030:intron 35.0%
CAAATTGGTTAAGCTTGTGT+TGG - chr8_4:49070190-49070209 None:intergenic 35.0%
! TTCTCACGTGCTTTTCAAAT+TGG - chr8_4:49070205-49070224 None:intergenic 35.0%
TTGTCATATAGATATGGGTG+AGG - chr8_4:49070248-49070267 None:intergenic 35.0%
ATCCAATTCTAGCAAGATGA+AGG + chr8_4:49070428-49070447 Msa1330030:intron 35.0%
TACCTTCATCTTGCTAGAAT+TGG - chr8_4:49070433-49070452 None:intergenic 35.0%
AACAGCCAAAACAAATAGAG+GGG - chr8_4:49070654-49070673 None:intergenic 35.0%
CATTTACTTTCCACGTCATA+TGG - chr8_4:49070680-49070699 None:intergenic 35.0%
AAATGTACATGCCTTCACAT+TGG + chr8_4:49070695-49070714 Msa1330030:intron 35.0%
! ATTTTATGTCACGTCATAGG+GGG + chr8_4:49070722-49070741 Msa1330030:intron 35.0%
TGTTGAAGATGATGAAGAAG+TGG - chr8_4:49071415-49071434 None:intergenic 35.0%
AATTTATGGAGGTAGTGAAG+TGG - chr8_4:49070950-49070969 None:intergenic 35.0%
AGCTACAATGAATGGAAAAG+TGG + chr8_4:49071111-49071130 Msa1330030:intron 35.0%
! AAGGTTTTCATCATCAAGGT+TGG - chr8_4:49071270-49071289 None:intergenic 35.0%
GAGAAGATGATGTTGTTGAT+AGG + chr8_4:49071339-49071358 Msa1330030:intron 35.0%
TGTTGAAGATGATGAAGAAG+TGG + chr8_4:49071415-49071434 Msa1330030:intron 35.0%
ATTAACGACAAAAATGTGCG+TGG - chr8_4:49071913-49071932 None:intergenic 35.0%
ATTGTCTTTGATTGTGCGTT+TGG - chr8_4:49072537-49072556 None:intergenic 35.0%
!!! GGAGTTTTGTTTTGACATAG+TGG + chr8_4:49072653-49072672 Msa1330030:intron 35.0%
!!! GTTTTGTTTTGACATAGTGG+TGG + chr8_4:49072656-49072675 Msa1330030:intron 35.0%
TGAGGAAGTGACAAAGTTTA+AGG - chr8_4:49072697-49072716 None:intergenic 35.0%
GTGATGGCATATATATAGTG+AGG - chr8_4:49072715-49072734 None:intergenic 35.0%
AATATCATCTGGAAAAGCCA+TGG - chr8_4:49073156-49073175 None:intergenic 35.0%
TTAGAGGTTGGAATATCATC+TGG - chr8_4:49073167-49073186 None:intergenic 35.0%
TGATCTGTTTGATTGAGGAA+GGG - chr8_4:49073288-49073307 None:intergenic 35.0%
!! AGATTTGGTGCTTGTAGAAA+CGG + chr8_4:49073347-49073366 Msa1330030:intron 35.0%
ACAAATTGCAACTTTGCTCA+TGG + chr8_4:49073371-49073390 Msa1330030:CDS 35.0%
CAAATTGCAACTTTGCTCAT+GGG + chr8_4:49073372-49073391 Msa1330030:CDS 35.0%
AAATTGCAACTTTGCTCATG+GGG + chr8_4:49073373-49073392 Msa1330030:CDS 35.0%
TTTGATGTAGTGAATTGCGG+CGG - chr8_4:49063578-49063597 None:intergenic 40.0%
ATCAACCCCATTCCTTCAAA+AGG + chr8_4:49063669-49063688 Msa1330030:CDS 40.0%
TCAACCCCATTCCTTCAAAA+GGG + chr8_4:49063670-49063689 Msa1330030:CDS 40.0%
!! TCTTGCCCTTTTGAAGGAAT+GGG - chr8_4:49063678-49063697 None:intergenic 40.0%
!! TTCTTGCCCTTTTGAAGGAA+TGG - chr8_4:49063679-49063698 None:intergenic 40.0%
GTCTGTAATAAGTCCAGACT+TGG + chr8_4:49063797-49063816 Msa1330030:CDS 40.0%
GTTTCTACAAGTACCAAGTC+TGG - chr8_4:49063813-49063832 None:intergenic 40.0%
AGATTGCAACTTTGCTCATG+GGG + chr8_4:49063838-49063857 Msa1330030:CDS 40.0%
TTCACAAGATGAAGCTATGC+AGG + chr8_4:49063966-49063985 Msa1330030:CDS 40.0%
CTATGCAGGATGTATTCCAA+TGG + chr8_4:49063980-49063999 Msa1330030:intron 40.0%
ATGAGGATCCTGCTAAGTTT+AGG + chr8_4:49064041-49064060 Msa1330030:CDS 40.0%
TGAGGATCCTGCTAAGTTTA+GGG + chr8_4:49064042-49064061 Msa1330030:CDS 40.0%
GAATGATCCCTAAACTTAGC+AGG - chr8_4:49064052-49064071 None:intergenic 40.0%
GCTAAGTTTAGGGATCATTC+TGG + chr8_4:49064052-49064071 Msa1330030:CDS 40.0%
!! TCTATAAGCATTGGGGCTAT+TGG + chr8_4:49064094-49064113 Msa1330030:CDS 40.0%
AGACTAAGACGTGTTTCCAT+TGG + chr8_4:49064170-49064189 Msa1330030:CDS 40.0%
ACTGTGTTGTCAAATATCGG+CGG + chr8_4:49064517-49064536 Msa1330030:intron 40.0%
! CGGTCAAATGGCAGATTTTT+AGG + chr8_4:49064537-49064556 Msa1330030:intron 40.0%
AAACACACCATTGTGACCTA+TGG - chr8_4:49064879-49064898 None:intergenic 40.0%
AAAAGTAGGATGCTGCACTT+TGG + chr8_4:49065245-49065264 Msa1330030:intron 40.0%
TGCACTTTGGTATATGTCGA+TGG + chr8_4:49065258-49065277 Msa1330030:intron 40.0%
CAGCAGAAACCAAAAGGAAA+AGG - chr8_4:49065382-49065401 None:intergenic 40.0%
!!! TTCCTTTTGGTTTCTGCTGA+TGG + chr8_4:49065383-49065402 Msa1330030:intron 40.0%
!!! TCCTTTTGGTTTCTGCTGAT+GGG + chr8_4:49065384-49065403 Msa1330030:intron 40.0%
AAACGTCTATGCAACAATCG+TGG + chr8_4:49065555-49065574 Msa1330030:intron 40.0%
! GTTAAGGCTTTTCGTGAAGT+TGG - chr8_4:49065756-49065775 None:intergenic 40.0%
ACTTCACGAAAAGCCTTAAC+AGG + chr8_4:49065756-49065775 Msa1330030:CDS 40.0%
ATCATTGGCAGAACCTGTTA+AGG - chr8_4:49065772-49065791 None:intergenic 40.0%
!! TGACTTGAGTTTTGTGCTCT+TGG + chr8_4:49065960-49065979 Msa1330030:intron 40.0%
AAACACCCTTCATCTGGATA+AGG + chr8_4:49065983-49066002 Msa1330030:intron 40.0%
! CTACTCCACAGACAGAATTT+TGG + chr8_4:49066009-49066028 Msa1330030:intron 40.0%
!!! GTACAGTTTTTTGGTCGAAG+AGG + chr8_4:49066118-49066137 Msa1330030:intron 40.0%
! TGTGCATTTGTCGGTTAATG+AGG + chr8_4:49066141-49066160 Msa1330030:intron 40.0%
!! GTTAATGAGGAGTGTTTCGA+TGG + chr8_4:49066154-49066173 Msa1330030:intron 40.0%
!! AGAAACTTTTTGGGGGATTC+TGG + chr8_4:49066180-49066199 Msa1330030:intron 40.0%
!! GAAACTTTTTGGGGGATTCT+GGG + chr8_4:49066181-49066200 Msa1330030:intron 40.0%
! ATTCTGGGTTGGATTGACAT+TGG + chr8_4:49066196-49066215 Msa1330030:intron 40.0%
CTTCTTGTGGATGTATCCTA+AGG + chr8_4:49066357-49066376 Msa1330030:intron 40.0%
TCTTGTGGATGTATCCTAAG+GGG + chr8_4:49066359-49066378 Msa1330030:intron 40.0%
ATGTATCCTAAGGGGTGATA+AGG + chr8_4:49066367-49066386 Msa1330030:intron 40.0%
TGTATCCTAAGGGGTGATAA+GGG + chr8_4:49066368-49066387 Msa1330030:intron 40.0%
CAATGACCATCCCTTAGTTT+GGG - chr8_4:49066521-49066540 None:intergenic 40.0%
TCAATGACCATCCCTTAGTT+TGG - chr8_4:49066522-49066541 None:intergenic 40.0%
GTTATCCACGATGTATCACA+TGG - chr8_4:49066833-49066852 None:intergenic 40.0%
AAATCGTGAAACTCGTCAGA+GGG - chr8_4:49067026-49067045 None:intergenic 40.0%
AAAATCGTGAAACTCGTCAG+AGG - chr8_4:49067027-49067046 None:intergenic 40.0%
! AGTTTCACGATTTTCCCTGT+CGG + chr8_4:49067033-49067052 Msa1330030:intron 40.0%
TCTGGGTTGTCATTACATCT+AGG - chr8_4:49067246-49067265 None:intergenic 40.0%
TAATATCCTCACAATCCCGA+AGG - chr8_4:49067284-49067303 None:intergenic 40.0%
GCTTACATGAATGGCTAGAT+TGG + chr8_4:49067361-49067380 Msa1330030:intron 40.0%
! GACAGATTTTACCAATGGAC+GGG - chr8_4:49068260-49068279 None:intergenic 40.0%
! CGACAGATTTTACCAATGGA+CGG - chr8_4:49068261-49068280 None:intergenic 40.0%
! AACCTAGAAAGCACACAATG+TGG - chr8_4:49068291-49068310 None:intergenic 40.0%
TTCGTGAGACTTAAACTGAG+AGG + chr8_4:49068766-49068785 Msa1330030:intron 40.0%
TCGTGAGACTTAAACTGAGA+GGG + chr8_4:49068767-49068786 Msa1330030:intron 40.0%
GAATTCCCAAGGAACAAGTT+AGG - chr8_4:49069057-49069076 None:intergenic 40.0%
GATCTCTATTTCAAGATCGC+CGG + chr8_4:49069539-49069558 Msa1330030:intron 40.0%
TTGATCACACTCTTGGATAC+CGG - chr8_4:49069561-49069580 None:intergenic 40.0%
!!! CTTTCATCGTATTTTTCGGG+AGG - chr8_4:49069944-49069963 None:intergenic 40.0%
ATTACACTGATGCACGATGA+AGG + chr8_4:49070078-49070097 Msa1330030:intron 40.0%
!!! TAGGCAATCCTCACTGATTT+TGG - chr8_4:49070159-49070178 None:intergenic 40.0%
AAATCAGTGAGGATTGCCTA+TGG + chr8_4:49070159-49070178 Msa1330030:intron 40.0%
ATAGATATGGGTGAGGAATG+AGG - chr8_4:49070241-49070260 None:intergenic 40.0%
! TTACCCCCCTCTATTTGTTT+TGG + chr8_4:49070646-49070665 Msa1330030:intron 40.0%
ACAGCCAAAACAAATAGAGG+GGG - chr8_4:49070653-49070672 None:intergenic 40.0%
GAAGATGATGAAGAAGTGGA+AGG - chr8_4:49071419-49071438 None:intergenic 40.0%
!! GTTATTGTTGTTGATGGTGG+TGG - chr8_4:49070902-49070921 None:intergenic 40.0%
!! GGTGTTATTGTTGTTGATGG+TGG - chr8_4:49070905-49070924 None:intergenic 40.0%
!! GGTGGTGTTATTGTTGTTGA+TGG - chr8_4:49070908-49070927 None:intergenic 40.0%
AACCTGTGAGCTACAATGAA+TGG + chr8_4:49071103-49071122 Msa1330030:intron 40.0%
TTCCATTCATTGTAGCTCAC+AGG - chr8_4:49071108-49071127 None:intergenic 40.0%
! TTTAGGATCATGGACCTTGA+TGG + chr8_4:49071297-49071316 Msa1330030:intron 40.0%
GAAGATGATGAAGAAGTGGA+AGG + chr8_4:49071419-49071438 Msa1330030:intron 40.0%
AATACATGGTTCACCGTGAA+CGG - chr8_4:49071525-49071544 None:intergenic 40.0%
GACTACTCGTTACACATTCA+GGG - chr8_4:49072275-49072294 None:intergenic 40.0%
TGACTACTCGTTACACATTC+AGG - chr8_4:49072276-49072295 None:intergenic 40.0%
TGTCAAAACAAAACTCCAGC+AGG - chr8_4:49072650-49072669 None:intergenic 40.0%
!! TTTCAGTGTTGGTCGAGAAA+AGG - chr8_4:49072737-49072756 None:intergenic 40.0%
CCAAGATGAGAAAAACACGA+TGG - chr8_4:49072788-49072807 None:intergenic 40.0%
! CCATCGTGTTTTTCTCATCT+TGG + chr8_4:49072785-49072804 Msa1330030:intron 40.0%
TTCAATGAAGAGAACTGAGG+CGG - chr8_4:49073197-49073216 None:intergenic 40.0%
CTGATCTGTTTGATTGAGGA+AGG - chr8_4:49073289-49073308 None:intergenic 40.0%
TGGTCTGATCTGTTTGATTG+AGG - chr8_4:49073293-49073312 None:intergenic 40.0%
!! CTTGCCCTTTTGAAGGAATG+GGG - chr8_4:49063677-49063696 None:intergenic 45.0%
! AGGAGGGCATATCAAAGCAT+TGG - chr8_4:49063720-49063739 None:intergenic 45.0%
! GAAGAACCATCTTTGGAGGA+GGG - chr8_4:49063736-49063755 None:intergenic 45.0%
GATGGAGGAAGAACCATCTT+TGG - chr8_4:49063743-49063762 None:intergenic 45.0%
! CACGAGTCTTGTAGAAAACG+TGG - chr8_4:49063778-49063797 None:intergenic 45.0%
TAAGACTGCCACCACGAAAT+TGG + chr8_4:49063870-49063889 Msa1330030:CDS 45.0%
ACAGCAGCAGCTGAGAAATT+GGG + chr8_4:49063925-49063944 Msa1330030:CDS 45.0%
! TTCAAAGTCATTTGGGGCTG+TGG + chr8_4:49064120-49064139 Msa1330030:CDS 45.0%
TTCCAATAAGTGCCTCTAGC+TGG - chr8_4:49064151-49064170 None:intergenic 45.0%
TGTTTCCATTGGCAGCATCA+AGG + chr8_4:49064181-49064200 Msa1330030:CDS 45.0%
GTTTCCATTGGCAGCATCAA+GGG + chr8_4:49064182-49064201 Msa1330030:CDS 45.0%
ATCAAGGGAGATGTCCCTTT+GGG + chr8_4:49064197-49064216 Msa1330030:CDS 45.0%
AATTGACAGTCCTCCCCAAA+GGG - chr8_4:49064214-49064233 None:intergenic 45.0%
AAATTGACAGTCCTCCCCAA+AGG - chr8_4:49064215-49064234 None:intergenic 45.0%
! GAGGACTGTCAATTTGCTCA+TGG + chr8_4:49064220-49064239 Msa1330030:CDS 45.0%
! CAATTTGCTCATGGAGAAGC+AGG + chr8_4:49064229-49064248 Msa1330030:CDS 45.0%
GTCAAATATCGGCGGTCAAA+TGG + chr8_4:49064525-49064544 Msa1330030:intron 45.0%
!!! CAGATTTTTAGGAAGCGCCA+TGG + chr8_4:49064548-49064567 Msa1330030:intron 45.0%
CATCCTTCACAAATTGGCCA+TGG - chr8_4:49064568-49064587 None:intergenic 45.0%
CATGGCCAATTTGTGAAGGA+TGG + chr8_4:49064566-49064585 Msa1330030:intron 45.0%
TGTGAAGGATGGTTATGCCA+TGG + chr8_4:49064577-49064596 Msa1330030:intron 45.0%
! GGTTATGCCATGGCGTTTTA+TGG + chr8_4:49064587-49064606 Msa1330030:intron 45.0%
! TATGCCATGGCGTTTTATGG+TGG + chr8_4:49064590-49064609 Msa1330030:intron 45.0%
TAAGCCACCATAAAACGCCA+TGG - chr8_4:49064597-49064616 None:intergenic 45.0%
TCTGCCACACTATTCTGTCT+TGG - chr8_4:49064804-49064823 None:intergenic 45.0%
ACCCATCAGCAGAAACCAAA+AGG - chr8_4:49065388-49065407 None:intergenic 45.0%
GGTAGGTGCATATGCATCAT+TGG - chr8_4:49065787-49065806 None:intergenic 45.0%
AAGACTTGTGGCAAAGGAAG+AGG + chr8_4:49065818-49065837 Msa1330030:CDS 45.0%
TCTTGGAAACACCCTTCATC+TGG + chr8_4:49065977-49065996 Msa1330030:intron 45.0%
GGAAACATGGTCATTGGTGA+TGG + chr8_4:49066030-49066049 Msa1330030:intron 45.0%
! TCGAAGAGGTGTGCATTTGT+CGG + chr8_4:49066132-49066151 Msa1330030:intron 45.0%
CCTATTTGAACCCTGGACTT+TGG - chr8_4:49066235-49066254 None:intergenic 45.0%
CCAAAGTCCAGGGTTCAAAT+AGG + chr8_4:49066232-49066251 Msa1330030:intron 45.0%
AAACACCCTTATCACCCCTT+AGG - chr8_4:49066376-49066395 None:intergenic 45.0%
!! TATGCTTCCAAAGTTGGTGC+TGG + chr8_4:49066407-49066426 Msa1330030:intron 45.0%
ATTGCATCCAGCACCAACTT+TGG - chr8_4:49066417-49066436 None:intergenic 45.0%
CTGATTCCCAAACTAAGGGA+TGG + chr8_4:49066512-49066531 Msa1330030:intron 45.0%
! AGGATGTAAGAAGCATGGGA+CGG - chr8_4:49066545-49066564 None:intergenic 45.0%
ATGGAGAAGGTAATGCTCGA+TGG + chr8_4:49066588-49066607 Msa1330030:intron 45.0%
TGTTGCCATGTGATACATCG+TGG + chr8_4:49066825-49066844 Msa1330030:intron 45.0%
AATCGTGAAACTCGTCAGAG+GGG - chr8_4:49067025-49067044 None:intergenic 45.0%
! GTTTCACGATTTTCCCTGTC+GGG + chr8_4:49067034-49067053 Msa1330030:intron 45.0%
! AAGGCCTTATGGAAGTTCTC+TGG + chr8_4:49067152-49067171 Msa1330030:intron 45.0%
CTGTTAACGGCAAGACTTGA+CGG - chr8_4:49067619-49067638 None:intergenic 45.0%
TGACACGTCAGCACTGTTAA+CGG - chr8_4:49067632-49067651 None:intergenic 45.0%
CAAGTAAGCTTCCACGTGTA+CGG + chr8_4:49067675-49067694 Msa1330030:intron 45.0%
AAGTAAGCTTCCACGTGTAC+GGG + chr8_4:49067676-49067695 Msa1330030:intron 45.0%
TGCCACATTGTGTGCTTTCT+AGG + chr8_4:49068286-49068305 Msa1330030:intron 45.0%
AGACTTAAACTGAGAGGGCT+AGG + chr8_4:49068772-49068791 Msa1330030:intron 45.0%
TTAACGATGAGACTTGACGG+TGG + chr8_4:49069383-49069402 Msa1330030:intron 45.0%
CGAAATAGCAAATACGTCCC+TGG - chr8_4:49069436-49069455 None:intergenic 45.0%
TTCTAGTCAGTTGTACGGGT+TGG + chr8_4:49069583-49069602 Msa1330030:intron 45.0%
CAGCCAAAACAAATAGAGGG+GGG - chr8_4:49070652-49070671 None:intergenic 45.0%
GGCTGTTAAACCATATGACG+TGG + chr8_4:49070667-49070686 Msa1330030:intron 45.0%
!! ATTGTTGTTGATGGTGGTGG+AGG - chr8_4:49070899-49070918 None:intergenic 45.0%
AGACACTTACACACCGTTCA+CGG + chr8_4:49071509-49071528 Msa1330030:intron 45.0%
TCTCTGATTGTGCACTTCGT+TGG + chr8_4:49072337-49072356 Msa1330030:intron 45.0%
TGTTGGTCGAGAAAAGGTGA+TGG - chr8_4:49072731-49072750 None:intergenic 45.0%
! AGGAGGGCATATCAATGCAT+TGG - chr8_4:49073255-49073274 None:intergenic 45.0%
!!! TTTTTTTTTTTTTTTTTTTG+AGG + chr8_4:49069809-49069828 Msa1330030:intron 5.0%
!!! TTTTTTTTTTTTTTTTTTGA+GGG + chr8_4:49069810-49069829 Msa1330030:intron 5.0%
!!! TTTTTATTTTTTAAATATAG+AGG + chr8_4:49071585-49071604 Msa1330030:intron 5.0%
!!! TGAATATATTTTTTTTTTTA+CGG - chr8_4:49071989-49072008 None:intergenic 5.0%
GATATGCCCTCCTCCAAAGA+TGG + chr8_4:49063727-49063746 Msa1330030:CDS 50.0%
! GGAAGAACCATCTTTGGAGG+AGG - chr8_4:49063737-49063756 None:intergenic 50.0%
GGAGGAAGAACCATCTTTGG+AGG - chr8_4:49063740-49063759 None:intergenic 50.0%
TGGTCTGCTCTGTTTGATGG+AGG - chr8_4:49063758-49063777 None:intergenic 50.0%
ACGTGGTCTGCTCTGTTTGA+TGG - chr8_4:49063761-49063780 None:intergenic 50.0%
ACTAGCTCCTGCCAATTTCG+TGG - chr8_4:49063884-49063903 None:intergenic 50.0%
GACAGCAGCAGCTGAGAAAT+TGG + chr8_4:49063924-49063943 Msa1330030:CDS 50.0%
!! AGCCAGCTAGAGGCACTTAT+TGG + chr8_4:49064146-49064165 Msa1330030:CDS 50.0%
ATCTCCCTTGATGCTGCCAA+TGG - chr8_4:49064189-49064208 None:intergenic 50.0%
CATCAAGGGAGATGTCCCTT+TGG + chr8_4:49064196-49064215 Msa1330030:CDS 50.0%
TCAAGGGAGATGTCCCTTTG+GGG + chr8_4:49064198-49064217 Msa1330030:CDS 50.0%
!! GTGTTAACGATGACGGATGG+TGG - chr8_4:49064639-49064658 None:intergenic 50.0%
!! CCAGTGTTAACGATGACGGA+TGG - chr8_4:49064642-49064661 None:intergenic 50.0%
CCATCCGTCATCGTTAACAC+TGG + chr8_4:49064639-49064658 Msa1330030:intron 50.0%
AGCGCCAAGACAGAATAGTG+TGG + chr8_4:49064797-49064816 Msa1330030:intron 50.0%
AGCGTCACCATAGGTCACAA+TGG + chr8_4:49064869-49064888 Msa1330030:intron 50.0%
AGTGACAGTGTTGTCCATGG+AGG - chr8_4:49064940-49064959 None:intergenic 50.0%
CACAGTGACAGTGTTGTCCA+TGG - chr8_4:49064943-49064962 None:intergenic 50.0%
CTATAAAGCATGGGTACCCG+TGG + chr8_4:49065181-49065200 Msa1330030:intron 50.0%
ACCTACTTGCGTAACCACCA+CGG - chr8_4:49065201-49065220 None:intergenic 50.0%
CCTTTGCCACAAGTCTTGCA+GGG - chr8_4:49065815-49065834 None:intergenic 50.0%
TCCTTTGCCACAAGTCTTGC+AGG - chr8_4:49065816-49065835 None:intergenic 50.0%
! GGCAAGTTGGGAAGAACAAG+AGG - chr8_4:49065924-49065943 None:intergenic 50.0%
TCCACTGCACTTGGCAAGTT+GGG - chr8_4:49065936-49065955 None:intergenic 50.0%
AGTCAGTTCTCCACTGCACT+TGG - chr8_4:49065945-49065964 None:intergenic 50.0%
!! CTTTTTGGGGGATTCTGGGT+TGG + chr8_4:49066185-49066204 Msa1330030:intron 50.0%
ATCGTGAAACTCGTCAGAGG+GGG - chr8_4:49067024-49067043 None:intergenic 50.0%
! TTTGGAGTCAGATCCCGACA+GGG - chr8_4:49067050-49067069 None:intergenic 50.0%
GGCACCAGAGAACTTCCATA+AGG - chr8_4:49067159-49067178 None:intergenic 50.0%
ATGTTGCCTTCGGGATTGTG+AGG + chr8_4:49067275-49067294 Msa1330030:intron 50.0%
CGTACACGTGGAAGCTTACT+TGG - chr8_4:49067677-49067696 None:intergenic 50.0%
AGTAAGCTTCCACGTGTACG+GGG + chr8_4:49067677-49067696 Msa1330030:intron 50.0%
GGACGGGCCAACATACATAT+AGG - chr8_4:49068244-49068263 None:intergenic 50.0%
ATGTATGTTGGCCCGTCCAT+TGG + chr8_4:49068246-49068265 Msa1330030:intron 50.0%
CAAATTCGTCCTTGCACACG+TGG + chr8_4:49069283-49069302 Msa1330030:intron 50.0%
! CAATTTGGTGGTTGGACAGC+TGG - chr8_4:49069611-49069630 None:intergenic 50.0%
!! GCTTGTGTTGGGTTAGCCAT+AGG - chr8_4:49070178-49070197 None:intergenic 50.0%
AGGATCATGGACCTTGATGG+TGG + chr8_4:49071300-49071319 Msa1330030:intron 50.0%
!! TCATGGACCTTGATGGTGGT+TGG + chr8_4:49071304-49071323 Msa1330030:intron 50.0%
TTCACCTCCAACCACCATCA+AGG - chr8_4:49071314-49071333 None:intergenic 50.0%
CATTGATATGCCCTCCTCCA+AGG + chr8_4:49073258-49073277 Msa1330030:CDS 50.0%
GATTGAGGAAGGGTCATCCT+TGG - chr8_4:49073278-49073297 None:intergenic 50.0%
GGCGGTGACATCTTACAGGT+TGG - chr8_4:49063560-49063579 None:intergenic 55.0%
TTGCGGCGGTGACATCTTAC+AGG - chr8_4:49063564-49063583 None:intergenic 55.0%
ACTGCCACCACGAAATTGGC+AGG + chr8_4:49063874-49063893 Msa1330030:CDS 55.0%
AGCTCCTGCCAATTTCGTGG+TGG - chr8_4:49063881-49063900 None:intergenic 55.0%
GTTAGTCCTTGCAGCAGCGA+CGG + chr8_4:49063902-49063921 Msa1330030:CDS 55.0%
GCAGCAGCTGAGAAATTGGG+AGG + chr8_4:49063928-49063947 Msa1330030:CDS 55.0%
GCGCCATGGCCAATTTGTGA+AGG + chr8_4:49064562-49064581 Msa1330030:intron 55.0%
! TGTGACCTATGGTGACGCTG+TGG - chr8_4:49064868-49064887 None:intergenic 55.0%
TAAAGCATGGGTACCCGTGG+TGG + chr8_4:49065184-49065203 Msa1330030:intron 55.0%
CCTACTTGCGTAACCACCAC+GGG - chr8_4:49065200-49065219 None:intergenic 55.0%
TGCAGCTGCAGTTGCAGTGT+CGG + chr8_4:49065522-49065541 Msa1330030:intron 55.0%
AGTCTTGCAGGGAAGGTGGT+AGG - chr8_4:49065804-49065823 None:intergenic 55.0%
CACAAGTCTTGCAGGGAAGG+TGG - chr8_4:49065808-49065827 None:intergenic 55.0%
CACCTTCCCTGCAAGACTTG+TGG + chr8_4:49065806-49065825 Msa1330030:CDS 55.0%
TGCCACAAGTCTTGCAGGGA+AGG - chr8_4:49065811-49065830 None:intergenic 55.0%
CCCTGCAAGACTTGTGGCAA+AGG + chr8_4:49065812-49065831 Msa1330030:CDS 55.0%
TGTGGCAAAGGAAGAGGAGC+AGG + chr8_4:49065824-49065843 Msa1330030:CDS 55.0%
TCCCAACTTGCCAAGTGCAG+TGG + chr8_4:49065932-49065951 Msa1330030:intron 55.0%
CTCCACTGCACTTGGCAAGT+TGG - chr8_4:49065937-49065956 None:intergenic 55.0%
!! CTTTGGAGTCAGATCCCGAC+AGG - chr8_4:49067051-49067070 None:intergenic 55.0%
!! TGTCACGTTAAGCGCTGACG+TGG + chr8_4:49067647-49067666 Msa1330030:intron 55.0%
CAAATTCGTCCCCGTACACG+TGG - chr8_4:49067689-49067708 None:intergenic 55.0%
AGTCAGCTTCCACGTGTGCA+AGG - chr8_4:49069295-49069314 None:intergenic 55.0%
TGCACACGTGGAAGCTGACT+TGG + chr8_4:49069295-49069314 Msa1330030:intron 55.0%
!! TGGACCTTGATGGTGGTTGG+AGG + chr8_4:49071307-49071326 Msa1330030:intron 55.0%
GGCGGTGACATCTTAGAGGT+TGG - chr8_4:49073179-49073198 None:intergenic 55.0%
CTGAGGCGGTGACATCTTAG+AGG - chr8_4:49073183-49073202 None:intergenic 55.0%
GAAGGGTCATCCTTGGAGGA+GGG - chr8_4:49073271-49073290 None:intergenic 55.0%
TGAGGAAGGGTCATCCTTGG+AGG - chr8_4:49073275-49073294 None:intergenic 55.0%
GCTGTGGACAAGCCAGCTAG+AGG + chr8_4:49064136-49064155 Msa1330030:CDS 60.0%
! AGGGAGATGTCCCTTTGGGG+AGG + chr8_4:49064201-49064220 Msa1330030:CDS 60.0%
GTCTGCCACAGCGTCACCAT+AGG + chr8_4:49064860-49064879 Msa1330030:intron 60.0%
CCCGTGGTGGTTACGCAAGT+AGG + chr8_4:49065197-49065216 Msa1330030:intron 60.0%
ATTGGGTAGCAGCTGCCTGC+TGG + chr8_4:49072632-49072651 Msa1330030:intron 60.0%
GGAAGGGTCATCCTTGGAGG+AGG - chr8_4:49073272-49073291 None:intergenic 60.0%
TGCTGTCCGTCGCTGCTGCA+AGG - chr8_4:49063911-49063930 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 49063536 49073407 49063536 ID=Msa1330030;Name=Msa1330030
chr8_4 mRNA 49063536 49073407 49063536 ID=Msa1330030-mRNA-1;Parent=Msa1330030;Name=Msa1330030-mRNA-1;_AED=0.18;_eAED=0.21;_QI=0|0|0|1|0.2|0|6|0|374
chr8_4 exon 49063536 49063778 49063536 ID=Msa1330030-mRNA-1:exon:14136;Parent=Msa1330030-mRNA-1
chr8_4 exon 49063791 49063990 49063791 ID=Msa1330030-mRNA-1:exon:14137;Parent=Msa1330030-mRNA-1
chr8_4 exon 49064024 49064250 49064024 ID=Msa1330030-mRNA-1:exon:14138;Parent=Msa1330030-mRNA-1
chr8_4 exon 49065721 49065945 49065721 ID=Msa1330030-mRNA-1:exon:14139;Parent=Msa1330030-mRNA-1
chr8_4 exon 49073168 49073353 49073168 ID=Msa1330030-mRNA-1:exon:14140;Parent=Msa1330030-mRNA-1
chr8_4 exon 49073364 49073407 49073364 ID=Msa1330030-mRNA-1:exon:14141;Parent=Msa1330030-mRNA-1
chr8_4 CDS 49063536 49063778 49063536 ID=Msa1330030-mRNA-1:cds;Parent=Msa1330030-mRNA-1
chr8_4 CDS 49063791 49063990 49063791 ID=Msa1330030-mRNA-1:cds;Parent=Msa1330030-mRNA-1
chr8_4 CDS 49064024 49064250 49064024 ID=Msa1330030-mRNA-1:cds;Parent=Msa1330030-mRNA-1
chr8_4 CDS 49065721 49065945 49065721 ID=Msa1330030-mRNA-1:cds;Parent=Msa1330030-mRNA-1
chr8_4 CDS 49073168 49073353 49073168 ID=Msa1330030-mRNA-1:cds;Parent=Msa1330030-mRNA-1
chr8_4 CDS 49073364 49073407 49073364 ID=Msa1330030-mRNA-1:cds;Parent=Msa1330030-mRNA-1
Gene Sequence

>Msa1330030

ATGGTTCTTCCAGACAATATTCCAACCTGTAAGATGTCACCGCCGCAATTCACTACATCAAACAGCGATATCATTGAAGTGAGACCTCGATTTCCAATGAAAAATGAAAACTTGGAACAACATTCAACATTGTATCAACCCCATTCCTTCAAAAGGGCAAGAATTTCTGATAACAATCGTTCCAATGCTTTGATATGCCCTCCTCCAAAGATGGTTCTTCCTCCATCAAACAGAGCAGACCACACTCGTGTCTGTAATAAGTCCAGACTTGGTACTTGTAGAAACGGTAAAGATTGCAACTTTGCTCATGGGGTTGAAGAACTAAGACTGCCACCACGAAATTGGCAGGAGCTAGTTAGTCCTTGCAGCAGCGACGGACAGCAGCAGCTGAGAAATTGGGAGGAAGATCAAAAAATGATTCACAAGATGAAGCTATGCAGGATTAAGTGTTATTTTCTTCATGAGGATCCTGCTAAGTTTAGGGATCATTCTGGGAAGTCAAGAGAGTGTTCTTCTATAAGCATTGGGGCTATTGGTTCTTCAAAGTCATTTGGGGCTGTGGACAAGCCAGCTAGAGGCACTTATTGGAAGACTAAGACGTGTTTCCATTGGCAGCATCAAGGGAGATGTCCCTTTGGGGAGGACTGTCAATTTGCTCATGGAGAAGCAGTTGCAATAGCAAATTCAACAAAAGCTATCATTCCAACTTCACGAAAAGCCTTAACAGGTTCTGCCAATGATGCATATGCACCTACCACCTTCCCTGCAAGACTTGTGGCAAAGGAAGAGGAGCAGGTTAAGAAGATGCATTTACTTTGGTTGAAATTAAACAAGATCAATCGTGTTTATGGTGATTGGATTGATGATTCACCTCTTGTTCTTCCCAACTTGCCAAATGATATTCCAACCTCTAAGATGTCACCGCCTCAGTTCTCTTCATTGAAAAACAATGACTTCAAAAGAGAAGGAACTTCTCATTCCAATGCATTGATATGCCCTCCTCCAAGGATGACCCTTCCTCAATCAAACAGATCAGACCATATTTTCTACAAAACACGAATTTGTACTAAGTTCAGATTTGAAACGGAACAAATTGCAACTTTGCTCATGGGGCTGAAGAGATAA

Protein sequence

>Msa1330030

MVLPDNIPTCKMSPPQFTTSNSDIIEVRPRFPMKNENLEQHSTLYQPHSFKRARISDNNRSNALICPPPKMVLPPSNRADHTRVCNKSRLGTCRNGKDCNFAHGVEELRLPPRNWQELVSPCSSDGQQQLRNWEEDQKMIHKMKLCRIKCYFLHEDPAKFRDHSGKSRECSSISIGAIGSSKSFGAVDKPARGTYWKTKTCFHWQHQGRCPFGEDCQFAHGEAVAIANSTKAIIPTSRKALTGSANDAYAPTTFPARLVAKEEEQVKKMHLLWLKLNKINRVYGDWIDDSPLVLPNLPNDIPTSKMSPPQFSSLKNNDFKREGTSHSNALICPPPRMTLPQSNRSDHIFYKTRICTKFRFETEQIATLLMGLKR*