Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1330030 | AES91466.2 | 47.872 | 94 | 21 | 2 | 297 | 362 | 3 | 96 | 3.69e-13 | 81.6 |
Msa1330030 | AES91466.2 | 80.625 | 320 | 42 | 4 | 1 | 301 | 1 | 319 | 0.0 | 519 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1330030 | sp|Q9LT81|C3H39_ARATH | 35.625 | 320 | 128 | 10 | 49 | 292 | 59 | 376 | 3.27e-49 | 173 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1330030 | G7JVB0 | 47.872 | 94 | 21 | 2 | 297 | 362 | 3 | 96 | 1.76e-13 | 81.6 |
Msa1330030 | G7JVB0 | 80.625 | 320 | 42 | 4 | 1 | 301 | 1 | 319 | 0.0 | 519 |
Gene ID | Type | Classification |
---|---|---|
Msa1330030 | TF | C3H |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1330030 | MtrunA17_Chr4g0063361 | 77.273 | 242 | 35 | 4 | 1 | 223 | 1 | 241 | 1.04e-130 | 374 |
Msa1330030 | MtrunA17_Chr4g0063361 | 47.872 | 94 | 21 | 2 | 297 | 362 | 3 | 96 | 2.77e-17 | 80.5 |
Msa1330030 | MtrunA17_Chr4g0063401 | 57.255 | 255 | 69 | 7 | 1 | 223 | 1 | 247 | 7.65e-94 | 281 |
Msa1330030 | MtrunA17_Chr4g0063401 | 44.444 | 90 | 27 | 3 | 296 | 362 | 2 | 91 | 3.97e-12 | 65.9 |
Msa1330030 | MtrunA17_Chr4g0063391 | 47.951 | 244 | 80 | 7 | 1 | 228 | 1 | 213 | 4.70e-63 | 201 |
Msa1330030 | MtrunA17_Chr4g0063391 | 89.394 | 66 | 7 | 0 | 297 | 362 | 3 | 68 | 4.26e-34 | 125 |
Msa1330030 | MtrunA17_Chr4g0063371 | 38.944 | 303 | 97 | 8 | 1 | 288 | 1 | 230 | 1.74e-58 | 189 |
Msa1330030 | MtrunA17_Chr4g0063371 | 77.778 | 72 | 8 | 1 | 297 | 360 | 3 | 74 | 3.13e-30 | 115 |
Msa1330030 | MtrunA17_Chr3g0098251 | 42.268 | 194 | 70 | 7 | 51 | 224 | 7 | 178 | 1.49e-38 | 137 |
Msa1330030 | MtrunA17_Chr8g0360671 | 40.426 | 141 | 45 | 5 | 101 | 224 | 41 | 159 | 1.02e-20 | 88.2 |
Msa1330030 | MtrunA17_Chr8g0366501 | 28.328 | 293 | 112 | 10 | 82 | 289 | 95 | 374 | 7.87e-19 | 87.0 |
Msa1330030 | MtrunA17_Chr4g0063411 | 60.870 | 69 | 23 | 3 | 223 | 289 | 24 | 90 | 2.26e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1330030 | AT3G19360.1 | 35.625 | 320 | 128 | 10 | 49 | 292 | 59 | 376 | 3.32e-50 | 173 |
Msa1330030 | AT3G19360.2 | 35.625 | 320 | 128 | 10 | 49 | 292 | 59 | 376 | 3.32e-50 | 173 |
Msa1330030 | AT2G35430.1 | 28.444 | 225 | 96 | 7 | 82 | 289 | 74 | 250 | 1.74e-15 | 75.9 |
Find 96 sgRNAs with CRISPR-Local
Find 566 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACAAGATCAATCGTGTTTA+TGG | 0.098083 | 8_4:+49065879 | Msa1330030:CDS |
TCCTTTGCCACAAGTCTTGC+AGG | 0.252708 | 8_4:-49065813 | None:intergenic |
GACAGCAGCAGCTGAGAAAT+TGG | 0.269527 | 8_4:+49063924 | Msa1330030:CDS |
ATTGGTTCTTCAAAGTCATT+TGG | 0.270173 | 8_4:+49064112 | Msa1330030:CDS |
ATGAGGATCCTGCTAAGTTT+AGG | 0.284721 | 8_4:+49064041 | Msa1330030:CDS |
TCTATAAGCATTGGGGCTAT+TGG | 0.301858 | 8_4:+49064094 | Msa1330030:CDS |
TAAGACTGCCACCACGAAAT+TGG | 0.308491 | 8_4:+49063870 | Msa1330030:CDS |
TTGGTTCTTCAAAGTCATTT+GGG | 0.308872 | 8_4:+49064113 | Msa1330030:CDS |
GATGGAGGAAGAACCATCTT+TGG | 0.330810 | 8_4:-49063740 | None:intergenic |
TGAGGATCCTGCTAAGTTTA+GGG | 0.331108 | 8_4:+49064042 | Msa1330030:CDS |
TCCACTGCACTTGGCAAGTT+GGG | 0.333885 | 8_4:-49065933 | None:intergenic |
TTGCGGCGGTGACATCTTAC+AGG | 0.346131 | 8_4:-49063561 | None:intergenic |
AGCCAGCTAGAGGCACTTAT+TGG | 0.353667 | 8_4:+49064146 | Msa1330030:CDS |
ACTTCACGAAAAGCCTTAAC+AGG | 0.358557 | 8_4:+49065756 | Msa1330030:CDS |
ATTTGTACTAAGTTCAGATT+TGG | 0.359410 | 8_4:+49073332 | Msa1330030:CDS |
TCAATCGTGTTTATGGTGAT+TGG | 0.369324 | 8_4:+49065886 | Msa1330030:CDS |
ATCAAGGGAGATGTCCCTTT+GGG | 0.372752 | 8_4:+49064197 | Msa1330030:CDS |
GCTAAGTTTAGGGATCATTC+TGG | 0.384575 | 8_4:+49064052 | Msa1330030:CDS |
TTCAAAGTCATTTGGGGCTG+TGG | 0.389237 | 8_4:+49064120 | Msa1330030:CDS |
ACGTGGTCTGCTCTGTTTGA+TGG | 0.398666 | 8_4:-49063758 | None:intergenic |
ATCAACCCCATTCCTTCAAA+AGG | 0.402198 | 8_4:+49063669 | Msa1330030:CDS |
AGTGTTCTTCTATAAGCATT+GGG | 0.403399 | 8_4:+49064086 | Msa1330030:CDS |
TTACAGGTTGGAATATTGTC+TGG | 0.446583 | 8_4:-49063545 | None:intergenic |
CTGAGGCGGTGACATCTTAG+AGG | 0.449778 | 8_4:-49073180 | None:intergenic |
TTAAGAAGATGCATTTACTT+TGG | 0.454114 | 8_4:+49065847 | Msa1330030:CDS |
CTCCACTGCACTTGGCAAGT+TGG | 0.458746 | 8_4:-49065934 | None:intergenic |
ATCATTGGCAGAACCTGTTA+AGG | 0.460853 | 8_4:-49065769 | None:intergenic |
CATCAAGGGAGATGTCCCTT+TGG | 0.465946 | 8_4:+49064196 | Msa1330030:CDS |
ACAAATTGCAACTTTGCTCA+TGG | 0.469357 | 8_4:+49073371 | Msa1330030:CDS |
TGCCACAAGTCTTGCAGGGA+AGG | 0.471441 | 8_4:-49065808 | None:intergenic |
CTGATCTGTTTGATTGAGGA+AGG | 0.475163 | 8_4:-49073286 | None:intergenic |
ACAGCAGCAGCTGAGAAATT+GGG | 0.480050 | 8_4:+49063925 | Msa1330030:CDS |
CCCTGCAAGACTTGTGGCAA+AGG | 0.480562 | 8_4:+49065812 | Msa1330030:CDS |
GGTAGGTGCATATGCATCAT+TGG | 0.482923 | 8_4:-49065784 | None:intergenic |
GATATGCCCTCCTCCAAAGA+TGG | 0.484001 | 8_4:+49063727 | Msa1330030:CDS |
CTAAGTTTAGGGATCATTCT+GGG | 0.485241 | 8_4:+49064053 | Msa1330030:CDS |
TGCTGTCCGTCGCTGCTGCA+AGG | 0.486679 | 8_4:-49063908 | None:intergenic |
AAAGATTGCAACTTTGCTCA+TGG | 0.488168 | 8_4:+49063836 | Msa1330030:CDS |
CTCATGGGGCTGAAGAGATA+AGG | 0.488249 | 8_4:+49073387 | Msa1330030:CDS |
CAAATTGCAACTTTGCTCAT+GGG | 0.490368 | 8_4:+49073372 | Msa1330030:CDS |
GTTTCTACAAGTACCAAGTC+TGG | 0.493005 | 8_4:-49063810 | None:intergenic |
GATTGAGGAAGGGTCATCCT+TGG | 0.496966 | 8_4:-49073275 | None:intergenic |
AAGATTGCAACTTTGCTCAT+GGG | 0.501520 | 8_4:+49063837 | Msa1330030:CDS |
TTCCAATAAGTGCCTCTAGC+TGG | 0.502818 | 8_4:-49064148 | None:intergenic |
TTCACAAGATGAAGCTATGC+AGG | 0.506731 | 8_4:+49063966 | Msa1330030:CDS |
CAATTTGCTCATGGAGAAGC+AGG | 0.507401 | 8_4:+49064229 | Msa1330030:CDS |
ATCTCCCTTGATGCTGCCAA+TGG | 0.509822 | 8_4:-49064186 | None:intergenic |
AGACTAAGACGTGTTTCCAT+TGG | 0.510007 | 8_4:+49064170 | Msa1330030:CDS |
GAATGATCCCTAAACTTAGC+AGG | 0.515278 | 8_4:-49064049 | None:intergenic |
GAGTGTTCTTCTATAAGCAT+TGG | 0.515583 | 8_4:+49064085 | Msa1330030:CDS |
GTTTCCATTGGCAGCATCAA+GGG | 0.516368 | 8_4:+49064182 | Msa1330030:CDS |
AGACTTGGTACTTGTAGAAA+CGG | 0.521320 | 8_4:+49063812 | Msa1330030:CDS |
GAGGACTGTCAATTTGCTCA+TGG | 0.526443 | 8_4:+49064220 | Msa1330030:CDS |
AAGACTTGTGGCAAAGGAAG+AGG | 0.529531 | 8_4:+49065818 | Msa1330030:CDS |
GGAAGGGTCATCCTTGGAGG+AGG | 0.531078 | 8_4:-49073269 | None:intergenic |
GGCGGTGACATCTTAGAGGT+TGG | 0.533133 | 8_4:-49073176 | None:intergenic |
TGTTTCCATTGGCAGCATCA+AGG | 0.535568 | 8_4:+49064181 | Msa1330030:CDS |
TGTGGCAAAGGAAGAGGAGC+AGG | 0.535571 | 8_4:+49065824 | Msa1330030:CDS |
ACTAGCTCCTGCCAATTTCG+TGG | 0.541649 | 8_4:-49063881 | None:intergenic |
AACAATGACTTCAAAAGAGA+AGG | 0.542813 | 8_4:+49073218 | Msa1330030:CDS |
TGGTTCTTCAAAGTCATTTG+GGG | 0.545756 | 8_4:+49064114 | Msa1330030:CDS |
CCTTTGCCACAAGTCTTGCA+GGG | 0.547135 | 8_4:-49065812 | None:intergenic |
AGATTGCAACTTTGCTCATG+GGG | 0.548831 | 8_4:+49063838 | Msa1330030:CDS |
AAATTGCAACTTTGCTCATG+GGG | 0.550865 | 8_4:+49073373 | Msa1330030:CDS |
AGGAGGGCATATCAAAGCAT+TGG | 0.555491 | 8_4:-49063717 | None:intergenic |
AGGAGGGCATATCAATGCAT+TGG | 0.555491 | 8_4:-49073252 | None:intergenic |
TGAGGAAGGGTCATCCTTGG+AGG | 0.556539 | 8_4:-49073272 | None:intergenic |
ACTGCCACCACGAAATTGGC+AGG | 0.556769 | 8_4:+49063874 | Msa1330030:CDS |
CATTGATATGCCCTCCTCCA+AGG | 0.556864 | 8_4:+49073258 | Msa1330030:CDS |
GGAAGAACCATCTTTGGAGG+AGG | 0.559899 | 8_4:-49063734 | None:intergenic |
AATTGACAGTCCTCCCCAAA+GGG | 0.560613 | 8_4:-49064211 | None:intergenic |
TCAACCCCATTCCTTCAAAA+GGG | 0.563397 | 8_4:+49063670 | Msa1330030:CDS |
GGAGGAAGAACCATCTTTGG+AGG | 0.566069 | 8_4:-49063737 | None:intergenic |
CACCTTCCCTGCAAGACTTG+TGG | 0.570439 | 8_4:+49065806 | Msa1330030:CDS |
TGGTCTGATCTGTTTGATTG+AGG | 0.571695 | 8_4:-49073290 | None:intergenic |
GTCTGTAATAAGTCCAGACT+TGG | 0.573982 | 8_4:+49063797 | Msa1330030:CDS |
CACAAGTCTTGCAGGGAAGG+TGG | 0.574444 | 8_4:-49065805 | None:intergenic |
GTTAGTCCTTGCAGCAGCGA+CGG | 0.584359 | 8_4:+49063902 | Msa1330030:CDS |
AGTCTTGCAGGGAAGGTGGT+AGG | 0.597135 | 8_4:-49065801 | None:intergenic |
GGCGGTGACATCTTACAGGT+TGG | 0.597501 | 8_4:-49063557 | None:intergenic |
GGCAAGTTGGGAAGAACAAG+AGG | 0.612688 | 8_4:-49065921 | None:intergenic |
TGATCTGTTTGATTGAGGAA+GGG | 0.618914 | 8_4:-49073285 | None:intergenic |
GAAGGGTCATCCTTGGAGGA+GGG | 0.622595 | 8_4:-49073268 | None:intergenic |
GCTGTGGACAAGCCAGCTAG+AGG | 0.623188 | 8_4:+49064136 | Msa1330030:CDS |
AAATTGACAGTCCTCCCCAA+AGG | 0.626382 | 8_4:-49064212 | None:intergenic |
CTGTTTGATGTAGTGAATTG+CGG | 0.628943 | 8_4:-49063578 | None:intergenic |
GAAGAACCATCTTTGGAGGA+GGG | 0.630074 | 8_4:-49063733 | None:intergenic |
TTCAATGAAGAGAACTGAGG+CGG | 0.637828 | 8_4:-49073194 | None:intergenic |
AGGGAGATGTCCCTTTGGGG+AGG | 0.652421 | 8_4:+49064201 | Msa1330030:CDS |
GTGTTCTTCTATAAGCATTG+GGG | 0.654358 | 8_4:+49064087 | Msa1330030:CDS |
TGGTCTGCTCTGTTTGATGG+AGG | 0.659565 | 8_4:-49063755 | None:intergenic |
TCAAGGGAGATGTCCCTTTG+GGG | 0.666746 | 8_4:+49064198 | Msa1330030:CDS |
AGCTCCTGCCAATTTCGTGG+TGG | 0.669372 | 8_4:-49063878 | None:intergenic |
GCAGCAGCTGAGAAATTGGG+AGG | 0.680326 | 8_4:+49063928 | Msa1330030:CDS |
TTTGATGTAGTGAATTGCGG+CGG | 0.699237 | 8_4:-49063575 | None:intergenic |
AATATTGTCTGGAAGAACCA+TGG | 0.708668 | 8_4:-49063534 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGCAATATATATTAAAAAA+AGG | - | chr8_4:49065588-49065607 | None:intergenic | 10.0% |
!! | TTATATATCAAATCATATAT+TGG | + | chr8_4:49066321-49066340 | Msa1330030:intron | 10.0% |
!!! | TTTTAGTTTTTAACATTTAT+TGG | + | chr8_4:49069085-49069104 | Msa1330030:intron | 10.0% |
!!! | TAAATTTAAAATTTAACAAC+AGG | - | chr8_4:49069892-49069911 | None:intergenic | 10.0% |
!!! | TTTATATTATTTTTTTGTAG+AGG | + | chr8_4:49071225-49071244 | Msa1330030:intron | 10.0% |
!!! | TTTTTTTTTTTTTTGAAGAA+TGG | + | chr8_4:49071693-49071712 | Msa1330030:intron | 10.0% |
!! | ATATATTTATGTAAAATAAG+TGG | - | chr8_4:49071725-49071744 | None:intergenic | 10.0% |
!! | TTATAAATACGTAAAATAAT+TGG | + | chr8_4:49071781-49071800 | Msa1330030:intron | 10.0% |
!!! | TCAAAAAATATATATTTTGA+CGG | + | chr8_4:49072006-49072025 | Msa1330030:intron | 10.0% |
!! | TAACATTAATCAAATAATAA+TGG | + | chr8_4:49072103-49072122 | Msa1330030:intron | 10.0% |
!! | CAAAATCAATAATCAAAATA+GGG | - | chr8_4:49064290-49064309 | None:intergenic | 15.0% |
!!! | ATCCATTTACAAATTTTTTA+TGG | - | chr8_4:49064840-49064859 | None:intergenic | 15.0% |
!!! | TTAATCATCTCAATTTTATA+AGG | + | chr8_4:49065058-49065077 | Msa1330030:intron | 15.0% |
!! | AAAAGATGAATATAACATAA+TGG | - | chr8_4:49065345-49065364 | None:intergenic | 15.0% |
!!! | TTTTAACAATTTAAACTGTT+TGG | + | chr8_4:49065661-49065680 | Msa1330030:intron | 15.0% |
!! | ATTAACAGTAAAATAGAAAA+AGG | - | chr8_4:49066096-49066115 | None:intergenic | 15.0% |
!!! | TTTTCTATTTTACTGTTAAT+TGG | + | chr8_4:49066096-49066115 | Msa1330030:intron | 15.0% |
!!! | AATTCACTTTTAAATTTTGA+AGG | - | chr8_4:49066892-49066911 | None:intergenic | 15.0% |
!! | ATTGACATTTATAAAATTCA+AGG | - | chr8_4:49067583-49067602 | None:intergenic | 15.0% |
!! | TTATTCATTAAAAATCAAGT+TGG | + | chr8_4:49067791-49067810 | Msa1330030:intron | 15.0% |
!!! | AACTTGTTTATAGTATTTTT+GGG | - | chr8_4:49068033-49068052 | None:intergenic | 15.0% |
!!! | TAACTTGTTTATAGTATTTT+TGG | - | chr8_4:49068034-49068053 | None:intergenic | 15.0% |
!!! | ATATAGATTTAAAACTACAA+TGG | - | chr8_4:49068170-49068189 | None:intergenic | 15.0% |
!!! | AAGTTTAAGTGTTATTTATT+AGG | + | chr8_4:49068999-49069018 | Msa1330030:intron | 15.0% |
!! | TTATTCATTAAAAATCAAGT+TGG | - | chr8_4:49067791-49067810 | None:intergenic | 15.0% |
!!! | GATTTTTAATGAATAATTCA+AGG | + | chr8_4:49069191-49069210 | Msa1330030:intron | 15.0% |
!!! | TTATATTATTTTACGAGTAT+TGG | + | chr8_4:49070453-49070472 | Msa1330030:intron | 15.0% |
!! | ATAAAAAATCAAACACAAAT+GGG | + | chr8_4:49070485-49070504 | Msa1330030:intron | 15.0% |
!! | AATAGTGATAAAAAAATACA+TGG | - | chr8_4:49071539-49071558 | None:intergenic | 15.0% |
!!! | TTATTTTTTAAATATAGAGG+AGG | + | chr8_4:49071588-49071607 | Msa1330030:intron | 15.0% |
!! | TCTTCAAAAAAAAAAAAAAG+TGG | - | chr8_4:49071692-49071711 | None:intergenic | 15.0% |
!! | AATACAACATTAATTAACAA+GGG | - | chr8_4:49072203-49072222 | None:intergenic | 15.0% |
!! | AAATACAACATTAATTAACA+AGG | - | chr8_4:49072204-49072223 | None:intergenic | 15.0% |
!! | AATAATCAAAATAGGGAAAA+GGG | - | chr8_4:49064283-49064302 | None:intergenic | 20.0% |
!! | CCAAAATCAATAATCAAAAT+AGG | - | chr8_4:49064291-49064310 | None:intergenic | 20.0% |
!!! | CCTATTTTGATTATTGATTT+TGG | + | chr8_4:49064288-49064307 | Msa1330030:intron | 20.0% |
!! | ATATGATGTTCAAATTATAG+TGG | + | chr8_4:49064404-49064423 | Msa1330030:intron | 20.0% |
!! | AGCCATAAAAAATTTGTAAA+TGG | + | chr8_4:49064835-49064854 | Msa1330030:intron | 20.0% |
!!! | GTGTTTATATGTTGTATTTT+TGG | + | chr8_4:49064893-49064912 | Msa1330030:intron | 20.0% |
!!! | TATTTTTATGTATTGGATCA+CGG | - | chr8_4:49065301-49065320 | None:intergenic | 20.0% |
!!! | TCACATGTATTTTTATGTAT+TGG | - | chr8_4:49065308-49065327 | None:intergenic | 20.0% |
!! | AATAGAAAAAGGAAAAAAAG+AGG | - | chr8_4:49066085-49066104 | None:intergenic | 20.0% |
!! | AATTCAAACAAATTAAGATC+GGG | - | chr8_4:49066681-49066700 | None:intergenic | 20.0% |
!! | CAATTCAAACAAATTAAGAT+CGG | - | chr8_4:49066682-49066701 | None:intergenic | 20.0% |
!!! | AAATATCATCTAAAGTAAAG+TGG | - | chr8_4:49067214-49067233 | None:intergenic | 20.0% |
!! | TATGTGTCAATATTGATAAA+TGG | + | chr8_4:49067401-49067420 | Msa1330030:intron | 20.0% |
!!! | ACTTTATAAAAGTGTTATGT+CGG | + | chr8_4:49068111-49068130 | Msa1330030:intron | 20.0% |
!! | TGTATCAAATCTAAAAATGA+AGG | + | chr8_4:49068739-49068758 | Msa1330030:intron | 20.0% |
!! | GTATCAAATCTAAAAATGAA+GGG | + | chr8_4:49068740-49068759 | Msa1330030:intron | 20.0% |
!! | AAAACATGTACAATAAGAAA+AGG | + | chr8_4:49068867-49068886 | Msa1330030:intron | 20.0% |
!!! | GATTCTAAAGTCATAAAATT+TGG | - | chr8_4:49068950-49068969 | None:intergenic | 20.0% |
!! | ACTTATTGTTTAATTCTTTG+AGG | - | chr8_4:49068983-49069002 | None:intergenic | 20.0% |
!!! | TTTAAGTGTTATTTATTAGG+AGG | + | chr8_4:49069002-49069021 | Msa1330030:intron | 20.0% |
!! | AATTGACATTTATAAAATCC+AGG | + | chr8_4:49069415-49069434 | Msa1330030:intron | 20.0% |
!! | ATTGACATTTATAAAATCCA+GGG | + | chr8_4:49069416-49069435 | Msa1330030:intron | 20.0% |
!! | AAAAAACAAAATCAATTTGG+TGG | - | chr8_4:49069623-49069642 | None:intergenic | 20.0% |
!! | GTCAAAAAACAAAATCAATT+TGG | - | chr8_4:49069626-49069645 | None:intergenic | 20.0% |
!! | CAAACTTTGGATTAAATTAA+TGG | - | chr8_4:49070129-49070148 | None:intergenic | 20.0% |
!! | AAATCTTGTCATATAGATAT+GGG | - | chr8_4:49070253-49070272 | None:intergenic | 20.0% |
!! | CATAAAAAATCAAACACAAA+TGG | + | chr8_4:49070484-49070503 | Msa1330030:intron | 20.0% |
!!! | ATATATGACAAAAAGTATCT+GGG | - | chr8_4:49070513-49070532 | None:intergenic | 20.0% |
!!! | AATATATGACAAAAAGTATC+TGG | - | chr8_4:49070514-49070533 | None:intergenic | 20.0% |
!!! | TTTTTGTCATATATTGTTTG+AGG | + | chr8_4:49070519-49070538 | Msa1330030:intron | 20.0% |
!!! | TGTTTTTGAAGATATAGTTT+AGG | - | chr8_4:49071009-49071028 | None:intergenic | 20.0% |
!!! | CATTAAGATTTAAGATTCAA+GGG | - | chr8_4:49071078-49071097 | None:intergenic | 20.0% |
!!! | ACATTAAGATTTAAGATTCA+AGG | - | chr8_4:49071079-49071098 | None:intergenic | 20.0% |
!! | ACAACATGCAAAAAAATATA+TGG | - | chr8_4:49071179-49071198 | None:intergenic | 20.0% |
!! | TAACACTTCAATTCAAAAAT+TGG | + | chr8_4:49071805-49071824 | Msa1330030:intron | 20.0% |
!! | ACTTCGTTAACAAAAAAAAA+AGG | - | chr8_4:49071848-49071867 | None:intergenic | 20.0% |
!! | TTGCTCATTTGTATTTATTT+AGG | + | chr8_4:49072038-49072057 | Msa1330030:intron | 20.0% |
!! | TGCTCATTTGTATTTATTTA+GGG | + | chr8_4:49072039-49072058 | Msa1330030:intron | 20.0% |
!!! | TCATTTTTGTCTTGTTTTAT+TGG | + | chr8_4:49072614-49072633 | Msa1330030:intron | 20.0% |
!!! | CATTTTTGTCTTGTTTTATT+GGG | + | chr8_4:49072615-49072634 | Msa1330030:intron | 20.0% |
! | TCCAATGAAAAATGAAAACT+TGG | + | chr8_4:49063628-49063647 | Msa1330030:CDS | 25.0% |
!!! | TCCAAGTTTTCATTTTTCAT+TGG | - | chr8_4:49063632-49063651 | None:intergenic | 25.0% |
!!! | TAAGTGTTATTTTCTTCATG+AGG | + | chr8_4:49064024-49064043 | Msa1330030:CDS | 25.0% |
! | CAATAATCAAAATAGGGAAA+AGG | - | chr8_4:49064284-49064303 | None:intergenic | 25.0% |
! | AAAACTGTGTTGTCAAATAT+CGG | + | chr8_4:49064514-49064533 | Msa1330030:intron | 25.0% |
! | AAAGATAAAGTAATCACTAG+TGG | - | chr8_4:49064680-49064699 | None:intergenic | 25.0% |
!! | TACATATCAGTGTTGTTAAA+TGG | + | chr8_4:49064773-49064792 | Msa1330030:intron | 25.0% |
! | TCAAATAGAAATTCCTAATG+TGG | - | chr8_4:49065006-49065025 | None:intergenic | 25.0% |
! | AAGGCATGATTACTATTAAA+TGG | + | chr8_4:49065077-49065096 | Msa1330030:intron | 25.0% |
!!! | TGACTGAAATTTTAGTAGTT+TGG | + | chr8_4:49065124-49065143 | Msa1330030:intron | 25.0% |
!! | TATATGTCGATGGATATTTT+GGG | + | chr8_4:49065268-49065287 | Msa1330030:intron | 25.0% |
! | TGAGTTAGACATCAAATTAT+AGG | - | chr8_4:49065414-49065433 | None:intergenic | 25.0% |
! | CATATTTGACTGCAATATTA+AGG | - | chr8_4:49065497-49065516 | None:intergenic | 25.0% |
! | CTTAATATTGCAGTCAAATA+TGG | + | chr8_4:49065495-49065514 | Msa1330030:intron | 25.0% |
! | TTAAGAAGATGCATTTACTT+TGG | + | chr8_4:49065847-49065866 | Msa1330030:CDS | 25.0% |
!!! | TGTTAATTGGTACAGTTTTT+TGG | + | chr8_4:49066109-49066128 | Msa1330030:intron | 25.0% |
! | TTGATATATAAACGACACAT+AGG | - | chr8_4:49066312-49066331 | None:intergenic | 25.0% |
! | TTCAAGATTCATTGCATTTA+TGG | + | chr8_4:49066569-49066588 | Msa1330030:intron | 25.0% |
!! | TGCATATTTTGTTAAACACA+TGG | + | chr8_4:49066642-49066661 | Msa1330030:intron | 25.0% |
!! | GCATATTTTGTTAAACACAT+GGG | + | chr8_4:49066643-49066662 | Msa1330030:intron | 25.0% |
!! | TTTTCTTACTAATGTCTTGT+TGG | + | chr8_4:49066708-49066727 | Msa1330030:intron | 25.0% |
!!! | TATAGAGGTTTTTAGTTTCA+TGG | + | chr8_4:49066754-49066773 | Msa1330030:intron | 25.0% |
!!! | ATAGAGGTTTTTAGTTTCAT+GGG | + | chr8_4:49066755-49066774 | Msa1330030:intron | 25.0% |
!!! | CTTTGTTTTTGTTGAATGAA+AGG | - | chr8_4:49066789-49066808 | None:intergenic | 25.0% |
! | TTGAGTAAGTTCTTCAATAT+TGG | + | chr8_4:49067339-49067358 | Msa1330030:intron | 25.0% |
! | AAGAAAAACTATGAGTGAAT+AGG | + | chr8_4:49067486-49067505 | Msa1330030:intron | 25.0% |
! | AGAAAAACTATGAGTGAATA+GGG | + | chr8_4:49067487-49067506 | Msa1330030:intron | 25.0% |
! | TTGGTACATACAAATTTGAA+GGG | - | chr8_4:49067520-49067539 | None:intergenic | 25.0% |
! | ATTGGTACATACAAATTTGA+AGG | - | chr8_4:49067521-49067540 | None:intergenic | 25.0% |
! | ATAGTGAGTGACATAATTTA+GGG | - | chr8_4:49067818-49067837 | None:intergenic | 25.0% |
!! | GCATTTATTTGATAGTATCA+AGG | - | chr8_4:49067883-49067902 | None:intergenic | 25.0% |
!!! | TTAGAGACTGATTTTCAAAT+AGG | - | chr8_4:49068090-49068109 | None:intergenic | 25.0% |
!!! | TAAAACTACAATGGTTTTGT+TGG | - | chr8_4:49068161-49068180 | None:intergenic | 25.0% |
! | GAATATACCTATATGTATGT+TGG | + | chr8_4:49068234-49068253 | Msa1330030:intron | 25.0% |
!! | AAGACAATCTCTTTTCTTTA+GGG | - | chr8_4:49068326-49068345 | None:intergenic | 25.0% |
! | AAATATGAAGGTGACTTAAT+GGG | - | chr8_4:49068477-49068496 | None:intergenic | 25.0% |
!! | TTTAAAGTTAGCCAATGATT+CGG | + | chr8_4:49069751-49069770 | Msa1330030:intron | 25.0% |
!! | TAAGCTTTCATCGTATTTTT+CGG | - | chr8_4:49069948-49069967 | None:intergenic | 25.0% |
!! | TCATCATTTTCAAAATCCTT+GGG | - | chr8_4:49070022-49070041 | None:intergenic | 25.0% |
! | GAGCTTACTAAAAAAACATT+TGG | + | chr8_4:49070040-49070059 | Msa1330030:intron | 25.0% |
!!! | TTTTGGTGTTTTTCAAACTT+TGG | - | chr8_4:49070142-49070161 | None:intergenic | 25.0% |
! | CAAATCTTGTCATATAGATA+TGG | - | chr8_4:49070254-49070273 | None:intergenic | 25.0% |
!! | ACTATTTAATCTTAGCTTGA+CGG | - | chr8_4:49070320-49070339 | None:intergenic | 25.0% |
!!! | CTCATACATTGATTTATGAT+CGG | + | chr8_4:49070377-49070396 | Msa1330030:intron | 25.0% |
!!! | TATATGACAAAAAGTATCTG+GGG | - | chr8_4:49070512-49070531 | None:intergenic | 25.0% |
! | TATATTGTTTGAGGAGTAAA+TGG | + | chr8_4:49070528-49070547 | Msa1330030:intron | 25.0% |
! | ATATTGTTTGAGGAGTAAAT+GGG | + | chr8_4:49070529-49070548 | Msa1330030:intron | 25.0% |
! | AAGTTTCTTAAAAGTCATGA+GGG | - | chr8_4:49070591-49070610 | None:intergenic | 25.0% |
!! | GATTTTGTTGACAGAATTTA+TGG | - | chr8_4:49070964-49070983 | None:intergenic | 25.0% |
! | ACATCATAAAATTGAGTAGA+AGG | + | chr8_4:49071032-49071051 | Msa1330030:intron | 25.0% |
! | TGAAAACCTTGAAATTGTTT+AGG | + | chr8_4:49071280-49071299 | Msa1330030:intron | 25.0% |
! | TCAATGTTCATAAAAAATGC+AGG | - | chr8_4:49071386-49071405 | None:intergenic | 25.0% |
!!! | GTTAATGCTTTGTATTTTTG+TGG | - | chr8_4:49071670-49071689 | None:intergenic | 25.0% |
!!! | ACCGAAATACTTTTTTTTAG+GGG | - | chr8_4:49071755-49071774 | None:intergenic | 25.0% |
!!! | GACCGAAATACTTTTTTTTA+GGG | - | chr8_4:49071756-49071775 | None:intergenic | 25.0% |
!!! | TGACCGAAATACTTTTTTTT+AGG | - | chr8_4:49071757-49071776 | None:intergenic | 25.0% |
! | CGTTAACAAAAAAAAAAGGA+TGG | - | chr8_4:49071844-49071863 | None:intergenic | 25.0% |
! | GAAATTTATGTTTCGAAAAG+TGG | + | chr8_4:49071883-49071902 | Msa1330030:intron | 25.0% |
! | ATTATTCACCATTCATTGAT+GGG | - | chr8_4:49072143-49072162 | None:intergenic | 25.0% |
! | AATTATTCACCATTCATTGA+TGG | - | chr8_4:49072144-49072163 | None:intergenic | 25.0% |
!! | TAATTTTACTCATGTTGAGT+TGG | + | chr8_4:49072159-49072178 | Msa1330030:intron | 25.0% |
!! | AAAAAGTGTGTTGAGTTATT+AGG | + | chr8_4:49072232-49072251 | Msa1330030:intron | 25.0% |
!! | AAAAGTGTGTTGAGTTATTA+GGG | + | chr8_4:49072233-49072252 | Msa1330030:intron | 25.0% |
! | TTTCAATACATTGAAGTTGA+GGG | - | chr8_4:49072306-49072325 | None:intergenic | 25.0% |
! | ATTTCAATACATTGAAGTTG+AGG | - | chr8_4:49072307-49072326 | None:intergenic | 25.0% |
!! | TAACTCAAAAGTAGCTATTT+TGG | - | chr8_4:49072594-49072613 | None:intergenic | 25.0% |
!!! | AAGTTTAAGGTTTTTTAGCT+GGG | - | chr8_4:49072684-49072703 | None:intergenic | 25.0% |
!!! | AAAGTTTAAGGTTTTTTAGC+TGG | - | chr8_4:49072685-49072704 | None:intergenic | 25.0% |
!! | TTCGTGTTTTGTAGAAAATA+TGG | - | chr8_4:49073313-49073332 | None:intergenic | 25.0% |
! | ATTTGTACTAAGTTCAGATT+TGG | + | chr8_4:49073332-49073351 | Msa1330030:CDS | 25.0% |
!! | TCATTTTTCATTGGAAATCG+AGG | - | chr8_4:49063623-49063642 | None:intergenic | 30.0% |
AAAGAAACATTTCTCACCAT+TGG | - | chr8_4:49063999-49064018 | None:intergenic | 30.0% | |
AATGGTGAGAAATGTTTCTT+TGG | + | chr8_4:49063998-49064017 | Msa1330030:intron | 30.0% | |
AGTGTTCTTCTATAAGCATT+GGG | + | chr8_4:49064086-49064105 | Msa1330030:CDS | 30.0% | |
! | ATTGGTTCTTCAAAGTCATT+TGG | + | chr8_4:49064112-49064131 | Msa1330030:CDS | 30.0% |
! | TTGGTTCTTCAAAGTCATTT+GGG | + | chr8_4:49064113-49064132 | Msa1330030:CDS | 30.0% |
ATCATATAATTCTGCTGTAC+TGG | + | chr8_4:49064315-49064334 | Msa1330030:intron | 30.0% | |
! | GCGTATGATATTTTCATGTT+TGG | + | chr8_4:49064452-49064471 | Msa1330030:intron | 30.0% |
ACAACTGCTATGTTTATCTA+AGG | + | chr8_4:49064748-49064767 | Msa1330030:intron | 30.0% | |
CTTTATAGCTGATAACAGAA+AGG | - | chr8_4:49065169-49065188 | None:intergenic | 30.0% | |
TGTTATCAGCTATAAAGCAT+GGG | + | chr8_4:49065172-49065191 | Msa1330030:intron | 30.0% | |
CTTGTCGGATAAAAAAAAGT+AGG | + | chr8_4:49065231-49065250 | Msa1330030:intron | 30.0% | |
! | GTATATGTCGATGGATATTT+TGG | + | chr8_4:49065267-49065286 | Msa1330030:intron | 30.0% |
!! | CTAACTCATCAATAGTTTTG+AGG | + | chr8_4:49065426-49065445 | Msa1330030:intron | 30.0% |
CAATATTAAGGATTGTGACA+TGG | - | chr8_4:49065485-49065504 | None:intergenic | 30.0% | |
AACAAGATCAATCGTGTTTA+TGG | + | chr8_4:49065879-49065898 | Msa1330030:CDS | 30.0% | |
!! | AATTTTGGAAACATGGTCAT+TGG | + | chr8_4:49066024-49066043 | Msa1330030:intron | 30.0% |
!! | ATTTTAACCTATTTGAACCC+TGG | - | chr8_4:49066242-49066261 | None:intergenic | 30.0% |
TATTCTGATTCCCAAACTAA+GGG | + | chr8_4:49066508-49066527 | Msa1330030:intron | 30.0% | |
TGCAATGAATCTTGAAAACA+AGG | - | chr8_4:49066565-49066584 | None:intergenic | 30.0% | |
ATTCATTGCATTTATGGAGA+AGG | + | chr8_4:49066575-49066594 | Msa1330030:intron | 30.0% | |
! | GTTGCAGTTAGTTTATATAG+AGG | + | chr8_4:49066739-49066758 | Msa1330030:intron | 30.0% |
!!! | TAGAGGTTTTTAGTTTCATG+GGG | + | chr8_4:49066756-49066775 | Msa1330030:intron | 30.0% |
CCAATTGTAAATGACTTCTT+TGG | - | chr8_4:49067068-49067087 | None:intergenic | 30.0% | |
CCAAAGAAGTCATTTACAAT+TGG | + | chr8_4:49067065-49067084 | Msa1330030:intron | 30.0% | |
AGAAGTCATTTACAATTGGA+TGG | + | chr8_4:49067069-49067088 | Msa1330030:intron | 30.0% | |
CTAGAACCTTATGTTTGATA+AGG | + | chr8_4:49067099-49067118 | Msa1330030:intron | 30.0% | |
ACCTTATGTTTGATAAGGTT+TGG | + | chr8_4:49067104-49067123 | Msa1330030:intron | 30.0% | |
!! | AATGGACTAAACAGAATCAA+AGG | + | chr8_4:49067133-49067152 | Msa1330030:intron | 30.0% |
ATTCTACTATATGTTGCCTT+CGG | + | chr8_4:49067265-49067284 | Msa1330030:intron | 30.0% | |
AATCACGAGTTTAACAATCT+TGG | - | chr8_4:49067319-49067338 | None:intergenic | 30.0% | |
!! | TCAATATTGGCTTACATGAA+TGG | + | chr8_4:49067352-49067371 | Msa1330030:intron | 30.0% |
TGATTGACAACACCAAAAAA+AGG | - | chr8_4:49067430-49067449 | None:intergenic | 30.0% | |
TGGTACATACAAATTTGAAG+GGG | - | chr8_4:49067519-49067538 | None:intergenic | 30.0% | |
ATCGAGGGATGAAAATTAAT+TGG | - | chr8_4:49067539-49067558 | None:intergenic | 30.0% | |
!! | TTGCTATTTCGAAAAATCGA+GGG | - | chr8_4:49067554-49067573 | None:intergenic | 30.0% |
!! | TTTGCTATTTCGAAAAATCG+AGG | - | chr8_4:49067555-49067574 | None:intergenic | 30.0% |
GATAGTGAGTGACATAATTT+AGG | - | chr8_4:49067819-49067838 | None:intergenic | 30.0% | |
! | TGGTTTGTCATAAACTAAGT+AGG | - | chr8_4:49068141-49068160 | None:intergenic | 30.0% |
! | CAAGACAATCTCTTTTCTTT+AGG | - | chr8_4:49068327-49068346 | None:intergenic | 30.0% |
! | GATGATATTTTGTGTTTTGC+AGG | - | chr8_4:49068353-49068372 | None:intergenic | 30.0% |
ATTATGCATGGATAATTGTC+TGG | - | chr8_4:49068392-49068411 | None:intergenic | 30.0% | |
AACACATGTGTAATTATGCA+TGG | - | chr8_4:49068404-49068423 | None:intergenic | 30.0% | |
! | TTTTACATGTTGAAGAACCA+TGG | + | chr8_4:49068422-49068441 | Msa1330030:intron | 30.0% |
GAAATATGAAGGTGACTTAA+TGG | - | chr8_4:49068478-49068497 | None:intergenic | 30.0% | |
AGTACGAATGTGAAATATGA+AGG | - | chr8_4:49068489-49068508 | None:intergenic | 30.0% | |
!! | CACTTTTAAAAATCGGTTCA+TGG | - | chr8_4:49068605-49068624 | None:intergenic | 30.0% |
!! | CCAGCTACACTTTTAAAAAT+CGG | - | chr8_4:49068612-49068631 | None:intergenic | 30.0% |
! | AAGAAGAGTTAGACTTTTGT+CGG | - | chr8_4:49068656-49068675 | None:intergenic | 30.0% |
CACTTCAGAGTTTAAATTAC+CGG | + | chr8_4:49068679-49068698 | Msa1330030:intron | 30.0% | |
AATTCGGTTAATGCAAATAC+CGG | - | chr8_4:49068701-49068720 | None:intergenic | 30.0% | |
GCGTATTGTTTAATTAGAAG+CGG | - | chr8_4:49068837-49068856 | None:intergenic | 30.0% | |
!! | ATTATTCCTAACTTGTTCCT+TGG | + | chr8_4:49069048-49069067 | Msa1330030:intron | 30.0% |
!! | TTATTCCTAACTTGTTCCTT+GGG | + | chr8_4:49069049-49069068 | Msa1330030:intron | 30.0% |
AAAAATGTGAAGAATTCCCA+AGG | - | chr8_4:49069068-49069087 | None:intergenic | 30.0% | |
!!! | TTAACGATGAGACTTTTTTG+AGG | + | chr8_4:49069356-49069375 | Msa1330030:intron | 30.0% |
!!! | TAACGATGAGACTTTTTTGA+GGG | + | chr8_4:49069357-49069376 | Msa1330030:intron | 30.0% |
AATTTAACGATGAGACTTGA+CGG | + | chr8_4:49069380-49069399 | Msa1330030:intron | 30.0% | |
GATCTGTGCATATAAATTTG+AGG | + | chr8_4:49069476-49069495 | Msa1330030:intron | 30.0% | |
TTCACTCGAAAAACTATTCT+AGG | + | chr8_4:49069512-49069531 | Msa1330030:intron | 30.0% | |
TAGAATATTGATCACACTCT+TGG | - | chr8_4:49069568-49069587 | None:intergenic | 30.0% | |
CAATATTCTAGTCAGTTGTA+CGG | + | chr8_4:49069578-49069597 | Msa1330030:intron | 30.0% | |
AATATTCTAGTCAGTTGTAC+GGG | + | chr8_4:49069579-49069598 | Msa1330030:intron | 30.0% | |
! | AACAAAATCAATTTGGTGGT+TGG | - | chr8_4:49069619-49069638 | None:intergenic | 30.0% |
CATTTGCATCTGTGATATAT+CGG | + | chr8_4:49069661-49069680 | Msa1330030:intron | 30.0% | |
ATTTGCATCTGTGATATATC+GGG | + | chr8_4:49069662-49069681 | Msa1330030:intron | 30.0% | |
AACAACAGGATCATAGAAAA+GGG | - | chr8_4:49069878-49069897 | None:intergenic | 30.0% | |
TAACAACAGGATCATAGAAA+AGG | - | chr8_4:49069879-49069898 | None:intergenic | 30.0% | |
! | AAGCTTTCATCGTATTTTTC+GGG | - | chr8_4:49069947-49069966 | None:intergenic | 30.0% |
! | CTTATCATAAAGCATCATGA+AGG | + | chr8_4:49069964-49069983 | Msa1330030:intron | 30.0% |
GTATAGTAAATTACATCCCA+AGG | + | chr8_4:49070003-49070022 | Msa1330030:intron | 30.0% | |
! | CTCATCATTTTCAAAATCCT+TGG | - | chr8_4:49070023-49070042 | None:intergenic | 30.0% |
AAATTGGTTAAGCTTGTGTT+GGG | - | chr8_4:49070189-49070208 | None:intergenic | 30.0% | |
!! | CTATATGACAAGATTTGCTA+CGG | + | chr8_4:49070257-49070276 | Msa1330030:intron | 30.0% |
TTGGATTGTATACGTTCTTA+CGG | - | chr8_4:49070414-49070433 | None:intergenic | 30.0% | |
TTGACGAAAGTTACAATTTC+AGG | - | chr8_4:49070565-49070584 | None:intergenic | 30.0% | |
GAAGTTTCTTAAAAGTCATG+AGG | - | chr8_4:49070592-49070611 | None:intergenic | 30.0% | |
AACGTTTGACAATTTCATGA+GGG | - | chr8_4:49070620-49070639 | None:intergenic | 30.0% | |
TAACGTTTGACAATTTCATG+AGG | - | chr8_4:49070621-49070640 | None:intergenic | 30.0% | |
TAACAGCCAAAACAAATAGA+GGG | - | chr8_4:49070655-49070674 | None:intergenic | 30.0% | |
TTAACAGCCAAAACAAATAG+AGG | - | chr8_4:49070656-49070675 | None:intergenic | 30.0% | |
ATAAAATTCAGCCAATGTGA+AGG | - | chr8_4:49070709-49070728 | None:intergenic | 30.0% | |
! | TGAATTTTATGTCACGTCAT+AGG | + | chr8_4:49070719-49070738 | Msa1330030:intron | 30.0% |
! | GAATTTTATGTCACGTCATA+GGG | + | chr8_4:49070720-49070739 | Msa1330030:intron | 30.0% |
! | AATTTTATGTCACGTCATAG+GGG | + | chr8_4:49070721-49070740 | Msa1330030:intron | 30.0% |
! | ATGATGATGTTGTTGTTGAT+AGG | - | chr8_4:49070864-49070883 | None:intergenic | 30.0% |
!!! | TTTTTGTTGATTAGCTTAGG+TGG | - | chr8_4:49070926-49070945 | None:intergenic | 30.0% |
!!! | GGATTTTTGTTGATTAGCTT+AGG | - | chr8_4:49070929-49070948 | None:intergenic | 30.0% |
TTTGTTGACAGAATTTATGG+AGG | - | chr8_4:49070961-49070980 | None:intergenic | 30.0% | |
! | TTTCAAGGTTTTCATCATCA+AGG | - | chr8_4:49071274-49071293 | None:intergenic | 30.0% |
CATGATCCTAAACAATTTCA+AGG | - | chr8_4:49071289-49071308 | None:intergenic | 30.0% | |
! | CTTGAAATTGTTTAGGATCA+TGG | + | chr8_4:49071287-49071306 | Msa1330030:intron | 30.0% |
ATGAGTAAATAGGCAAAAAG+TGG | - | chr8_4:49071483-49071502 | None:intergenic | 30.0% | |
GTCTCAAACAATGAGTAAAT+AGG | - | chr8_4:49071493-49071512 | None:intergenic | 30.0% | |
!!! | CCGAAATACTTTTTTTTAGG+GGG | - | chr8_4:49071754-49071773 | None:intergenic | 30.0% |
!! | CCCCCTAAAAAAAAGTATTT+CGG | + | chr8_4:49071751-49071770 | Msa1330030:intron | 30.0% |
CTTATTTACCCATCAATGAA+TGG | + | chr8_4:49072132-49072151 | Msa1330030:intron | 30.0% | |
TCACAATAACTCTTCATGTA+TGG | - | chr8_4:49072471-49072490 | None:intergenic | 30.0% | |
!!! | AGTTTAAGGTTTTTTAGCTG+GGG | - | chr8_4:49072683-49072702 | None:intergenic | 30.0% |
! | TTGGTTATTGTTTTCAGTGT+TGG | - | chr8_4:49072748-49072767 | None:intergenic | 30.0% |
GGATGAGATGATCAAAAATT+TGG | - | chr8_4:49072767-49072786 | None:intergenic | 30.0% | |
TCAAATTGCATGTCACTATT+TGG | + | chr8_4:49073053-49073072 | Msa1330030:intron | 30.0% | |
AATTTCTTTGACAACAACCA+TGG | + | chr8_4:49073136-49073155 | Msa1330030:intron | 30.0% | |
!! | TTTTTCAATGAAGAGAACTG+AGG | - | chr8_4:49073200-49073219 | None:intergenic | 30.0% |
AACAATGACTTCAAAAGAGA+AGG | + | chr8_4:49073218-49073237 | Msa1330030:CDS | 30.0% | |
! | TTACAGGTTGGAATATTGTC+TGG | - | chr8_4:49063548-49063567 | None:intergenic | 35.0% |
CTGTTTGATGTAGTGAATTG+CGG | - | chr8_4:49063581-49063600 | None:intergenic | 35.0% | |
! | AGAAATTCTTGCCCTTTTGA+AGG | - | chr8_4:49063684-49063703 | None:intergenic | 35.0% |
! | AGACTTGGTACTTGTAGAAA+CGG | + | chr8_4:49063812-49063831 | Msa1330030:CDS | 35.0% |
AAAGATTGCAACTTTGCTCA+TGG | + | chr8_4:49063836-49063855 | Msa1330030:CDS | 35.0% | |
AAGATTGCAACTTTGCTCAT+GGG | + | chr8_4:49063837-49063856 | Msa1330030:CDS | 35.0% | |
CTAAGTTTAGGGATCATTCT+GGG | + | chr8_4:49064053-49064072 | Msa1330030:CDS | 35.0% | |
GAGTGTTCTTCTATAAGCAT+TGG | + | chr8_4:49064085-49064104 | Msa1330030:CDS | 35.0% | |
! | GTGTTCTTCTATAAGCATTG+GGG | + | chr8_4:49064087-49064106 | Msa1330030:CDS | 35.0% |
TGGTTCTTCAAAGTCATTTG+GGG | + | chr8_4:49064114-49064133 | Msa1330030:CDS | 35.0% | |
CATAACCATCCTTCACAAAT+TGG | - | chr8_4:49064574-49064593 | None:intergenic | 35.0% | |
TAAACCAGTGTTAACGATGA+CGG | - | chr8_4:49064646-49064665 | None:intergenic | 35.0% | |
TCTTTGTGTTCAAATTTCCG+TGG | + | chr8_4:49064695-49064714 | Msa1330030:intron | 35.0% | |
! | ATATCAATGTGTTGCTACCA+CGG | - | chr8_4:49064715-49064734 | None:intergenic | 35.0% |
GGATCGTTAAATATACTGGA+AGG | - | chr8_4:49064919-49064938 | None:intergenic | 35.0% | |
TGGAGGATCGTTAAATATAC+TGG | - | chr8_4:49064923-49064942 | None:intergenic | 35.0% | |
GTATATTTAACGATCCTCCA+TGG | + | chr8_4:49064923-49064942 | Msa1330030:intron | 35.0% | |
! | ATTTTCGTGTCAACCACATT+AGG | + | chr8_4:49064990-49065009 | Msa1330030:intron | 35.0% |
CTGTTATCAGCTATAAAGCA+TGG | + | chr8_4:49065171-49065190 | Msa1330030:intron | 35.0% | |
!! | TAGGTATCGAAATTGCTTGT+CGG | + | chr8_4:49065216-49065235 | Msa1330030:intron | 35.0% |
AGGAAAAGGAAAAACAGGTT+TGG | - | chr8_4:49065368-49065387 | None:intergenic | 35.0% | |
CCAAAAGGAAAAGGAAAAAC+AGG | - | chr8_4:49065373-49065392 | None:intergenic | 35.0% | |
!! | CCTGTTTTTCCTTTTCCTTT+TGG | + | chr8_4:49065370-49065389 | Msa1330030:intron | 35.0% |
ATGAGTCAGAATACGATACA+TGG | - | chr8_4:49065690-49065709 | None:intergenic | 35.0% | |
TCAATCGTGTTTATGGTGAT+TGG | + | chr8_4:49065886-49065905 | Msa1330030:CDS | 35.0% | |
AGAATCCTTATCCAGATGAA+GGG | - | chr8_4:49065991-49066010 | None:intergenic | 35.0% | |
TAGAATCCTTATCCAGATGA+AGG | - | chr8_4:49065992-49066011 | None:intergenic | 35.0% | |
TGTTTCCAAAATTCTGTCTG+TGG | - | chr8_4:49066017-49066036 | None:intergenic | 35.0% | |
!! | CAGACAGAATTTTGGAAACA+TGG | + | chr8_4:49066017-49066036 | Msa1330030:intron | 35.0% |
! | TCGATGGATCAGAAACTTTT+TGG | + | chr8_4:49066170-49066189 | Msa1330030:intron | 35.0% |
! | CGATGGATCAGAAACTTTTT+GGG | + | chr8_4:49066171-49066190 | Msa1330030:intron | 35.0% |
! | GATGGATCAGAAACTTTTTG+GGG | + | chr8_4:49066172-49066191 | Msa1330030:intron | 35.0% |
! | ATGGATCAGAAACTTTTTGG+GGG | + | chr8_4:49066173-49066192 | Msa1330030:intron | 35.0% |
AAATTTCTGAACCAAAGTCC+AGG | + | chr8_4:49066221-49066240 | Msa1330030:intron | 35.0% | |
AATTTCTGAACCAAAGTCCA+GGG | + | chr8_4:49066222-49066241 | Msa1330030:intron | 35.0% | |
! | CTTCGATTGTTTTCTTCTTG+TGG | + | chr8_4:49066344-49066363 | Msa1330030:intron | 35.0% |
TTCTTGTGGATGTATCCTAA+GGG | + | chr8_4:49066358-49066377 | Msa1330030:intron | 35.0% | |
TTTGCTTATGCTTCCAAAGT+TGG | + | chr8_4:49066401-49066420 | Msa1330030:intron | 35.0% | |
ATGTTCTTGATTCTGAGTTG+TGG | + | chr8_4:49066435-49066454 | Msa1330030:intron | 35.0% | |
!!! | GAGTTGTGGTGATTTTTTCA+TGG | + | chr8_4:49066449-49066468 | Msa1330030:intron | 35.0% |
TTCATGGTCTAAAAATCGCT+TGG | + | chr8_4:49066465-49066484 | Msa1330030:intron | 35.0% | |
CTAAAAATCGCTTGGAGTAA+AGG | + | chr8_4:49066473-49066492 | Msa1330030:intron | 35.0% | |
GTATTCTGATTCCCAAACTA+AGG | + | chr8_4:49066507-49066526 | Msa1330030:intron | 35.0% | |
! | AACAAGGATGTAAGAAGCAT+GGG | - | chr8_4:49066549-49066568 | None:intergenic | 35.0% |
AAACAAGGATGTAAGAAGCA+TGG | - | chr8_4:49066550-49066569 | None:intergenic | 35.0% | |
! | TCTTACTAATGTCTTGTTGG+CGG | + | chr8_4:49066711-49066730 | Msa1330030:intron | 35.0% |
! | TTTGAGACTAGACTCGTTTA+TGG | + | chr8_4:49066973-49066992 | Msa1330030:intron | 35.0% |
GCCAAACCTTATCAAACATA+AGG | - | chr8_4:49067108-49067127 | None:intergenic | 35.0% | |
!! | GATAAGGTTTGGCTTTAGAA+TGG | + | chr8_4:49067115-49067134 | Msa1330030:intron | 35.0% |
AAACAGAATCAAAGGCCTTA+TGG | + | chr8_4:49067141-49067160 | Msa1330030:intron | 35.0% | |
TTCTTCGTTCATTAGCAACT+TGG | - | chr8_4:49067180-49067199 | None:intergenic | 35.0% | |
AGTTGCTAATGAACGAAGAA+AGG | + | chr8_4:49067180-49067199 | Msa1330030:intron | 35.0% | |
GGCAACATATAGTAGAATCT+GGG | - | chr8_4:49067263-49067282 | None:intergenic | 35.0% | |
AGGCAACATATAGTAGAATC+TGG | - | chr8_4:49067264-49067283 | None:intergenic | 35.0% | |
TTCTACTATATGTTGCCTTC+GGG | + | chr8_4:49067266-49067285 | Msa1330030:intron | 35.0% | |
! | GTGAGGATATTACAGAGTTT+TGG | + | chr8_4:49067292-49067311 | Msa1330030:intron | 35.0% |
!!! | GATAAATGGACGCCTTTTTT+TGG | + | chr8_4:49067415-49067434 | Msa1330030:intron | 35.0% |
AAAATTTGAGCACACATCAG+TGG | + | chr8_4:49068198-49068217 | Msa1330030:intron | 35.0% | |
! | TCAACGACAGATTTTACCAA+TGG | - | chr8_4:49068265-49068284 | None:intergenic | 35.0% |
!!! | GAACCATGGAAGTATTTTAG+AGG | + | chr8_4:49068436-49068455 | Msa1330030:intron | 35.0% |
!! | TTGCCTCTAAAATACTTCCA+TGG | - | chr8_4:49068442-49068461 | None:intergenic | 35.0% |
!! | CCGATTTTTAAAAGTGTAGC+TGG | + | chr8_4:49068609-49068628 | Msa1330030:intron | 35.0% |
TTTGACAGTGTAACAATCTG+TGG | + | chr8_4:49069219-49069238 | Msa1330030:intron | 35.0% | |
AGAGTAATTAGCCGAATCAT+TGG | - | chr8_4:49069765-49069784 | None:intergenic | 35.0% | |
!!! | TAATGGCGTGTTTGTTTTTG+TGG | - | chr8_4:49070112-49070131 | None:intergenic | 35.0% |
GAAAAACACCAAAATCAGTG+AGG | + | chr8_4:49070148-49070167 | Msa1330030:intron | 35.0% | |
CAAATTGGTTAAGCTTGTGT+TGG | - | chr8_4:49070190-49070209 | None:intergenic | 35.0% | |
! | TTCTCACGTGCTTTTCAAAT+TGG | - | chr8_4:49070205-49070224 | None:intergenic | 35.0% |
TTGTCATATAGATATGGGTG+AGG | - | chr8_4:49070248-49070267 | None:intergenic | 35.0% | |
ATCCAATTCTAGCAAGATGA+AGG | + | chr8_4:49070428-49070447 | Msa1330030:intron | 35.0% | |
TACCTTCATCTTGCTAGAAT+TGG | - | chr8_4:49070433-49070452 | None:intergenic | 35.0% | |
AACAGCCAAAACAAATAGAG+GGG | - | chr8_4:49070654-49070673 | None:intergenic | 35.0% | |
CATTTACTTTCCACGTCATA+TGG | - | chr8_4:49070680-49070699 | None:intergenic | 35.0% | |
AAATGTACATGCCTTCACAT+TGG | + | chr8_4:49070695-49070714 | Msa1330030:intron | 35.0% | |
! | ATTTTATGTCACGTCATAGG+GGG | + | chr8_4:49070722-49070741 | Msa1330030:intron | 35.0% |
TGTTGAAGATGATGAAGAAG+TGG | - | chr8_4:49071415-49071434 | None:intergenic | 35.0% | |
AATTTATGGAGGTAGTGAAG+TGG | - | chr8_4:49070950-49070969 | None:intergenic | 35.0% | |
AGCTACAATGAATGGAAAAG+TGG | + | chr8_4:49071111-49071130 | Msa1330030:intron | 35.0% | |
! | AAGGTTTTCATCATCAAGGT+TGG | - | chr8_4:49071270-49071289 | None:intergenic | 35.0% |
GAGAAGATGATGTTGTTGAT+AGG | + | chr8_4:49071339-49071358 | Msa1330030:intron | 35.0% | |
TGTTGAAGATGATGAAGAAG+TGG | + | chr8_4:49071415-49071434 | Msa1330030:intron | 35.0% | |
ATTAACGACAAAAATGTGCG+TGG | - | chr8_4:49071913-49071932 | None:intergenic | 35.0% | |
ATTGTCTTTGATTGTGCGTT+TGG | - | chr8_4:49072537-49072556 | None:intergenic | 35.0% | |
!!! | GGAGTTTTGTTTTGACATAG+TGG | + | chr8_4:49072653-49072672 | Msa1330030:intron | 35.0% |
!!! | GTTTTGTTTTGACATAGTGG+TGG | + | chr8_4:49072656-49072675 | Msa1330030:intron | 35.0% |
TGAGGAAGTGACAAAGTTTA+AGG | - | chr8_4:49072697-49072716 | None:intergenic | 35.0% | |
GTGATGGCATATATATAGTG+AGG | - | chr8_4:49072715-49072734 | None:intergenic | 35.0% | |
AATATCATCTGGAAAAGCCA+TGG | - | chr8_4:49073156-49073175 | None:intergenic | 35.0% | |
TTAGAGGTTGGAATATCATC+TGG | - | chr8_4:49073167-49073186 | None:intergenic | 35.0% | |
TGATCTGTTTGATTGAGGAA+GGG | - | chr8_4:49073288-49073307 | None:intergenic | 35.0% | |
!! | AGATTTGGTGCTTGTAGAAA+CGG | + | chr8_4:49073347-49073366 | Msa1330030:intron | 35.0% |
ACAAATTGCAACTTTGCTCA+TGG | + | chr8_4:49073371-49073390 | Msa1330030:CDS | 35.0% | |
CAAATTGCAACTTTGCTCAT+GGG | + | chr8_4:49073372-49073391 | Msa1330030:CDS | 35.0% | |
AAATTGCAACTTTGCTCATG+GGG | + | chr8_4:49073373-49073392 | Msa1330030:CDS | 35.0% | |
TTTGATGTAGTGAATTGCGG+CGG | - | chr8_4:49063578-49063597 | None:intergenic | 40.0% | |
ATCAACCCCATTCCTTCAAA+AGG | + | chr8_4:49063669-49063688 | Msa1330030:CDS | 40.0% | |
TCAACCCCATTCCTTCAAAA+GGG | + | chr8_4:49063670-49063689 | Msa1330030:CDS | 40.0% | |
!! | TCTTGCCCTTTTGAAGGAAT+GGG | - | chr8_4:49063678-49063697 | None:intergenic | 40.0% |
!! | TTCTTGCCCTTTTGAAGGAA+TGG | - | chr8_4:49063679-49063698 | None:intergenic | 40.0% |
GTCTGTAATAAGTCCAGACT+TGG | + | chr8_4:49063797-49063816 | Msa1330030:CDS | 40.0% | |
GTTTCTACAAGTACCAAGTC+TGG | - | chr8_4:49063813-49063832 | None:intergenic | 40.0% | |
AGATTGCAACTTTGCTCATG+GGG | + | chr8_4:49063838-49063857 | Msa1330030:CDS | 40.0% | |
TTCACAAGATGAAGCTATGC+AGG | + | chr8_4:49063966-49063985 | Msa1330030:CDS | 40.0% | |
CTATGCAGGATGTATTCCAA+TGG | + | chr8_4:49063980-49063999 | Msa1330030:intron | 40.0% | |
ATGAGGATCCTGCTAAGTTT+AGG | + | chr8_4:49064041-49064060 | Msa1330030:CDS | 40.0% | |
TGAGGATCCTGCTAAGTTTA+GGG | + | chr8_4:49064042-49064061 | Msa1330030:CDS | 40.0% | |
GAATGATCCCTAAACTTAGC+AGG | - | chr8_4:49064052-49064071 | None:intergenic | 40.0% | |
GCTAAGTTTAGGGATCATTC+TGG | + | chr8_4:49064052-49064071 | Msa1330030:CDS | 40.0% | |
!! | TCTATAAGCATTGGGGCTAT+TGG | + | chr8_4:49064094-49064113 | Msa1330030:CDS | 40.0% |
AGACTAAGACGTGTTTCCAT+TGG | + | chr8_4:49064170-49064189 | Msa1330030:CDS | 40.0% | |
ACTGTGTTGTCAAATATCGG+CGG | + | chr8_4:49064517-49064536 | Msa1330030:intron | 40.0% | |
! | CGGTCAAATGGCAGATTTTT+AGG | + | chr8_4:49064537-49064556 | Msa1330030:intron | 40.0% |
AAACACACCATTGTGACCTA+TGG | - | chr8_4:49064879-49064898 | None:intergenic | 40.0% | |
AAAAGTAGGATGCTGCACTT+TGG | + | chr8_4:49065245-49065264 | Msa1330030:intron | 40.0% | |
TGCACTTTGGTATATGTCGA+TGG | + | chr8_4:49065258-49065277 | Msa1330030:intron | 40.0% | |
CAGCAGAAACCAAAAGGAAA+AGG | - | chr8_4:49065382-49065401 | None:intergenic | 40.0% | |
!!! | TTCCTTTTGGTTTCTGCTGA+TGG | + | chr8_4:49065383-49065402 | Msa1330030:intron | 40.0% |
!!! | TCCTTTTGGTTTCTGCTGAT+GGG | + | chr8_4:49065384-49065403 | Msa1330030:intron | 40.0% |
AAACGTCTATGCAACAATCG+TGG | + | chr8_4:49065555-49065574 | Msa1330030:intron | 40.0% | |
! | GTTAAGGCTTTTCGTGAAGT+TGG | - | chr8_4:49065756-49065775 | None:intergenic | 40.0% |
ACTTCACGAAAAGCCTTAAC+AGG | + | chr8_4:49065756-49065775 | Msa1330030:CDS | 40.0% | |
ATCATTGGCAGAACCTGTTA+AGG | - | chr8_4:49065772-49065791 | None:intergenic | 40.0% | |
!! | TGACTTGAGTTTTGTGCTCT+TGG | + | chr8_4:49065960-49065979 | Msa1330030:intron | 40.0% |
AAACACCCTTCATCTGGATA+AGG | + | chr8_4:49065983-49066002 | Msa1330030:intron | 40.0% | |
! | CTACTCCACAGACAGAATTT+TGG | + | chr8_4:49066009-49066028 | Msa1330030:intron | 40.0% |
!!! | GTACAGTTTTTTGGTCGAAG+AGG | + | chr8_4:49066118-49066137 | Msa1330030:intron | 40.0% |
! | TGTGCATTTGTCGGTTAATG+AGG | + | chr8_4:49066141-49066160 | Msa1330030:intron | 40.0% |
!! | GTTAATGAGGAGTGTTTCGA+TGG | + | chr8_4:49066154-49066173 | Msa1330030:intron | 40.0% |
!! | AGAAACTTTTTGGGGGATTC+TGG | + | chr8_4:49066180-49066199 | Msa1330030:intron | 40.0% |
!! | GAAACTTTTTGGGGGATTCT+GGG | + | chr8_4:49066181-49066200 | Msa1330030:intron | 40.0% |
! | ATTCTGGGTTGGATTGACAT+TGG | + | chr8_4:49066196-49066215 | Msa1330030:intron | 40.0% |
CTTCTTGTGGATGTATCCTA+AGG | + | chr8_4:49066357-49066376 | Msa1330030:intron | 40.0% | |
TCTTGTGGATGTATCCTAAG+GGG | + | chr8_4:49066359-49066378 | Msa1330030:intron | 40.0% | |
ATGTATCCTAAGGGGTGATA+AGG | + | chr8_4:49066367-49066386 | Msa1330030:intron | 40.0% | |
TGTATCCTAAGGGGTGATAA+GGG | + | chr8_4:49066368-49066387 | Msa1330030:intron | 40.0% | |
CAATGACCATCCCTTAGTTT+GGG | - | chr8_4:49066521-49066540 | None:intergenic | 40.0% | |
TCAATGACCATCCCTTAGTT+TGG | - | chr8_4:49066522-49066541 | None:intergenic | 40.0% | |
GTTATCCACGATGTATCACA+TGG | - | chr8_4:49066833-49066852 | None:intergenic | 40.0% | |
AAATCGTGAAACTCGTCAGA+GGG | - | chr8_4:49067026-49067045 | None:intergenic | 40.0% | |
AAAATCGTGAAACTCGTCAG+AGG | - | chr8_4:49067027-49067046 | None:intergenic | 40.0% | |
! | AGTTTCACGATTTTCCCTGT+CGG | + | chr8_4:49067033-49067052 | Msa1330030:intron | 40.0% |
TCTGGGTTGTCATTACATCT+AGG | - | chr8_4:49067246-49067265 | None:intergenic | 40.0% | |
TAATATCCTCACAATCCCGA+AGG | - | chr8_4:49067284-49067303 | None:intergenic | 40.0% | |
GCTTACATGAATGGCTAGAT+TGG | + | chr8_4:49067361-49067380 | Msa1330030:intron | 40.0% | |
! | GACAGATTTTACCAATGGAC+GGG | - | chr8_4:49068260-49068279 | None:intergenic | 40.0% |
! | CGACAGATTTTACCAATGGA+CGG | - | chr8_4:49068261-49068280 | None:intergenic | 40.0% |
! | AACCTAGAAAGCACACAATG+TGG | - | chr8_4:49068291-49068310 | None:intergenic | 40.0% |
TTCGTGAGACTTAAACTGAG+AGG | + | chr8_4:49068766-49068785 | Msa1330030:intron | 40.0% | |
TCGTGAGACTTAAACTGAGA+GGG | + | chr8_4:49068767-49068786 | Msa1330030:intron | 40.0% | |
GAATTCCCAAGGAACAAGTT+AGG | - | chr8_4:49069057-49069076 | None:intergenic | 40.0% | |
GATCTCTATTTCAAGATCGC+CGG | + | chr8_4:49069539-49069558 | Msa1330030:intron | 40.0% | |
TTGATCACACTCTTGGATAC+CGG | - | chr8_4:49069561-49069580 | None:intergenic | 40.0% | |
!!! | CTTTCATCGTATTTTTCGGG+AGG | - | chr8_4:49069944-49069963 | None:intergenic | 40.0% |
ATTACACTGATGCACGATGA+AGG | + | chr8_4:49070078-49070097 | Msa1330030:intron | 40.0% | |
!!! | TAGGCAATCCTCACTGATTT+TGG | - | chr8_4:49070159-49070178 | None:intergenic | 40.0% |
AAATCAGTGAGGATTGCCTA+TGG | + | chr8_4:49070159-49070178 | Msa1330030:intron | 40.0% | |
ATAGATATGGGTGAGGAATG+AGG | - | chr8_4:49070241-49070260 | None:intergenic | 40.0% | |
! | TTACCCCCCTCTATTTGTTT+TGG | + | chr8_4:49070646-49070665 | Msa1330030:intron | 40.0% |
ACAGCCAAAACAAATAGAGG+GGG | - | chr8_4:49070653-49070672 | None:intergenic | 40.0% | |
GAAGATGATGAAGAAGTGGA+AGG | - | chr8_4:49071419-49071438 | None:intergenic | 40.0% | |
!! | GTTATTGTTGTTGATGGTGG+TGG | - | chr8_4:49070902-49070921 | None:intergenic | 40.0% |
!! | GGTGTTATTGTTGTTGATGG+TGG | - | chr8_4:49070905-49070924 | None:intergenic | 40.0% |
!! | GGTGGTGTTATTGTTGTTGA+TGG | - | chr8_4:49070908-49070927 | None:intergenic | 40.0% |
AACCTGTGAGCTACAATGAA+TGG | + | chr8_4:49071103-49071122 | Msa1330030:intron | 40.0% | |
TTCCATTCATTGTAGCTCAC+AGG | - | chr8_4:49071108-49071127 | None:intergenic | 40.0% | |
! | TTTAGGATCATGGACCTTGA+TGG | + | chr8_4:49071297-49071316 | Msa1330030:intron | 40.0% |
GAAGATGATGAAGAAGTGGA+AGG | + | chr8_4:49071419-49071438 | Msa1330030:intron | 40.0% | |
AATACATGGTTCACCGTGAA+CGG | - | chr8_4:49071525-49071544 | None:intergenic | 40.0% | |
GACTACTCGTTACACATTCA+GGG | - | chr8_4:49072275-49072294 | None:intergenic | 40.0% | |
TGACTACTCGTTACACATTC+AGG | - | chr8_4:49072276-49072295 | None:intergenic | 40.0% | |
TGTCAAAACAAAACTCCAGC+AGG | - | chr8_4:49072650-49072669 | None:intergenic | 40.0% | |
!! | TTTCAGTGTTGGTCGAGAAA+AGG | - | chr8_4:49072737-49072756 | None:intergenic | 40.0% |
CCAAGATGAGAAAAACACGA+TGG | - | chr8_4:49072788-49072807 | None:intergenic | 40.0% | |
! | CCATCGTGTTTTTCTCATCT+TGG | + | chr8_4:49072785-49072804 | Msa1330030:intron | 40.0% |
TTCAATGAAGAGAACTGAGG+CGG | - | chr8_4:49073197-49073216 | None:intergenic | 40.0% | |
CTGATCTGTTTGATTGAGGA+AGG | - | chr8_4:49073289-49073308 | None:intergenic | 40.0% | |
TGGTCTGATCTGTTTGATTG+AGG | - | chr8_4:49073293-49073312 | None:intergenic | 40.0% | |
!! | CTTGCCCTTTTGAAGGAATG+GGG | - | chr8_4:49063677-49063696 | None:intergenic | 45.0% |
! | AGGAGGGCATATCAAAGCAT+TGG | - | chr8_4:49063720-49063739 | None:intergenic | 45.0% |
! | GAAGAACCATCTTTGGAGGA+GGG | - | chr8_4:49063736-49063755 | None:intergenic | 45.0% |
GATGGAGGAAGAACCATCTT+TGG | - | chr8_4:49063743-49063762 | None:intergenic | 45.0% | |
! | CACGAGTCTTGTAGAAAACG+TGG | - | chr8_4:49063778-49063797 | None:intergenic | 45.0% |
TAAGACTGCCACCACGAAAT+TGG | + | chr8_4:49063870-49063889 | Msa1330030:CDS | 45.0% | |
ACAGCAGCAGCTGAGAAATT+GGG | + | chr8_4:49063925-49063944 | Msa1330030:CDS | 45.0% | |
! | TTCAAAGTCATTTGGGGCTG+TGG | + | chr8_4:49064120-49064139 | Msa1330030:CDS | 45.0% |
TTCCAATAAGTGCCTCTAGC+TGG | - | chr8_4:49064151-49064170 | None:intergenic | 45.0% | |
TGTTTCCATTGGCAGCATCA+AGG | + | chr8_4:49064181-49064200 | Msa1330030:CDS | 45.0% | |
GTTTCCATTGGCAGCATCAA+GGG | + | chr8_4:49064182-49064201 | Msa1330030:CDS | 45.0% | |
ATCAAGGGAGATGTCCCTTT+GGG | + | chr8_4:49064197-49064216 | Msa1330030:CDS | 45.0% | |
AATTGACAGTCCTCCCCAAA+GGG | - | chr8_4:49064214-49064233 | None:intergenic | 45.0% | |
AAATTGACAGTCCTCCCCAA+AGG | - | chr8_4:49064215-49064234 | None:intergenic | 45.0% | |
! | GAGGACTGTCAATTTGCTCA+TGG | + | chr8_4:49064220-49064239 | Msa1330030:CDS | 45.0% |
! | CAATTTGCTCATGGAGAAGC+AGG | + | chr8_4:49064229-49064248 | Msa1330030:CDS | 45.0% |
GTCAAATATCGGCGGTCAAA+TGG | + | chr8_4:49064525-49064544 | Msa1330030:intron | 45.0% | |
!!! | CAGATTTTTAGGAAGCGCCA+TGG | + | chr8_4:49064548-49064567 | Msa1330030:intron | 45.0% |
CATCCTTCACAAATTGGCCA+TGG | - | chr8_4:49064568-49064587 | None:intergenic | 45.0% | |
CATGGCCAATTTGTGAAGGA+TGG | + | chr8_4:49064566-49064585 | Msa1330030:intron | 45.0% | |
TGTGAAGGATGGTTATGCCA+TGG | + | chr8_4:49064577-49064596 | Msa1330030:intron | 45.0% | |
! | GGTTATGCCATGGCGTTTTA+TGG | + | chr8_4:49064587-49064606 | Msa1330030:intron | 45.0% |
! | TATGCCATGGCGTTTTATGG+TGG | + | chr8_4:49064590-49064609 | Msa1330030:intron | 45.0% |
TAAGCCACCATAAAACGCCA+TGG | - | chr8_4:49064597-49064616 | None:intergenic | 45.0% | |
TCTGCCACACTATTCTGTCT+TGG | - | chr8_4:49064804-49064823 | None:intergenic | 45.0% | |
ACCCATCAGCAGAAACCAAA+AGG | - | chr8_4:49065388-49065407 | None:intergenic | 45.0% | |
GGTAGGTGCATATGCATCAT+TGG | - | chr8_4:49065787-49065806 | None:intergenic | 45.0% | |
AAGACTTGTGGCAAAGGAAG+AGG | + | chr8_4:49065818-49065837 | Msa1330030:CDS | 45.0% | |
TCTTGGAAACACCCTTCATC+TGG | + | chr8_4:49065977-49065996 | Msa1330030:intron | 45.0% | |
GGAAACATGGTCATTGGTGA+TGG | + | chr8_4:49066030-49066049 | Msa1330030:intron | 45.0% | |
! | TCGAAGAGGTGTGCATTTGT+CGG | + | chr8_4:49066132-49066151 | Msa1330030:intron | 45.0% |
CCTATTTGAACCCTGGACTT+TGG | - | chr8_4:49066235-49066254 | None:intergenic | 45.0% | |
CCAAAGTCCAGGGTTCAAAT+AGG | + | chr8_4:49066232-49066251 | Msa1330030:intron | 45.0% | |
AAACACCCTTATCACCCCTT+AGG | - | chr8_4:49066376-49066395 | None:intergenic | 45.0% | |
!! | TATGCTTCCAAAGTTGGTGC+TGG | + | chr8_4:49066407-49066426 | Msa1330030:intron | 45.0% |
ATTGCATCCAGCACCAACTT+TGG | - | chr8_4:49066417-49066436 | None:intergenic | 45.0% | |
CTGATTCCCAAACTAAGGGA+TGG | + | chr8_4:49066512-49066531 | Msa1330030:intron | 45.0% | |
! | AGGATGTAAGAAGCATGGGA+CGG | - | chr8_4:49066545-49066564 | None:intergenic | 45.0% |
ATGGAGAAGGTAATGCTCGA+TGG | + | chr8_4:49066588-49066607 | Msa1330030:intron | 45.0% | |
TGTTGCCATGTGATACATCG+TGG | + | chr8_4:49066825-49066844 | Msa1330030:intron | 45.0% | |
AATCGTGAAACTCGTCAGAG+GGG | - | chr8_4:49067025-49067044 | None:intergenic | 45.0% | |
! | GTTTCACGATTTTCCCTGTC+GGG | + | chr8_4:49067034-49067053 | Msa1330030:intron | 45.0% |
! | AAGGCCTTATGGAAGTTCTC+TGG | + | chr8_4:49067152-49067171 | Msa1330030:intron | 45.0% |
CTGTTAACGGCAAGACTTGA+CGG | - | chr8_4:49067619-49067638 | None:intergenic | 45.0% | |
TGACACGTCAGCACTGTTAA+CGG | - | chr8_4:49067632-49067651 | None:intergenic | 45.0% | |
CAAGTAAGCTTCCACGTGTA+CGG | + | chr8_4:49067675-49067694 | Msa1330030:intron | 45.0% | |
AAGTAAGCTTCCACGTGTAC+GGG | + | chr8_4:49067676-49067695 | Msa1330030:intron | 45.0% | |
TGCCACATTGTGTGCTTTCT+AGG | + | chr8_4:49068286-49068305 | Msa1330030:intron | 45.0% | |
AGACTTAAACTGAGAGGGCT+AGG | + | chr8_4:49068772-49068791 | Msa1330030:intron | 45.0% | |
TTAACGATGAGACTTGACGG+TGG | + | chr8_4:49069383-49069402 | Msa1330030:intron | 45.0% | |
CGAAATAGCAAATACGTCCC+TGG | - | chr8_4:49069436-49069455 | None:intergenic | 45.0% | |
TTCTAGTCAGTTGTACGGGT+TGG | + | chr8_4:49069583-49069602 | Msa1330030:intron | 45.0% | |
CAGCCAAAACAAATAGAGGG+GGG | - | chr8_4:49070652-49070671 | None:intergenic | 45.0% | |
GGCTGTTAAACCATATGACG+TGG | + | chr8_4:49070667-49070686 | Msa1330030:intron | 45.0% | |
!! | ATTGTTGTTGATGGTGGTGG+AGG | - | chr8_4:49070899-49070918 | None:intergenic | 45.0% |
AGACACTTACACACCGTTCA+CGG | + | chr8_4:49071509-49071528 | Msa1330030:intron | 45.0% | |
TCTCTGATTGTGCACTTCGT+TGG | + | chr8_4:49072337-49072356 | Msa1330030:intron | 45.0% | |
TGTTGGTCGAGAAAAGGTGA+TGG | - | chr8_4:49072731-49072750 | None:intergenic | 45.0% | |
! | AGGAGGGCATATCAATGCAT+TGG | - | chr8_4:49073255-49073274 | None:intergenic | 45.0% |
!!! | TTTTTTTTTTTTTTTTTTTG+AGG | + | chr8_4:49069809-49069828 | Msa1330030:intron | 5.0% |
!!! | TTTTTTTTTTTTTTTTTTGA+GGG | + | chr8_4:49069810-49069829 | Msa1330030:intron | 5.0% |
!!! | TTTTTATTTTTTAAATATAG+AGG | + | chr8_4:49071585-49071604 | Msa1330030:intron | 5.0% |
!!! | TGAATATATTTTTTTTTTTA+CGG | - | chr8_4:49071989-49072008 | None:intergenic | 5.0% |
GATATGCCCTCCTCCAAAGA+TGG | + | chr8_4:49063727-49063746 | Msa1330030:CDS | 50.0% | |
! | GGAAGAACCATCTTTGGAGG+AGG | - | chr8_4:49063737-49063756 | None:intergenic | 50.0% |
GGAGGAAGAACCATCTTTGG+AGG | - | chr8_4:49063740-49063759 | None:intergenic | 50.0% | |
TGGTCTGCTCTGTTTGATGG+AGG | - | chr8_4:49063758-49063777 | None:intergenic | 50.0% | |
ACGTGGTCTGCTCTGTTTGA+TGG | - | chr8_4:49063761-49063780 | None:intergenic | 50.0% | |
ACTAGCTCCTGCCAATTTCG+TGG | - | chr8_4:49063884-49063903 | None:intergenic | 50.0% | |
GACAGCAGCAGCTGAGAAAT+TGG | + | chr8_4:49063924-49063943 | Msa1330030:CDS | 50.0% | |
!! | AGCCAGCTAGAGGCACTTAT+TGG | + | chr8_4:49064146-49064165 | Msa1330030:CDS | 50.0% |
ATCTCCCTTGATGCTGCCAA+TGG | - | chr8_4:49064189-49064208 | None:intergenic | 50.0% | |
CATCAAGGGAGATGTCCCTT+TGG | + | chr8_4:49064196-49064215 | Msa1330030:CDS | 50.0% | |
TCAAGGGAGATGTCCCTTTG+GGG | + | chr8_4:49064198-49064217 | Msa1330030:CDS | 50.0% | |
!! | GTGTTAACGATGACGGATGG+TGG | - | chr8_4:49064639-49064658 | None:intergenic | 50.0% |
!! | CCAGTGTTAACGATGACGGA+TGG | - | chr8_4:49064642-49064661 | None:intergenic | 50.0% |
CCATCCGTCATCGTTAACAC+TGG | + | chr8_4:49064639-49064658 | Msa1330030:intron | 50.0% | |
AGCGCCAAGACAGAATAGTG+TGG | + | chr8_4:49064797-49064816 | Msa1330030:intron | 50.0% | |
AGCGTCACCATAGGTCACAA+TGG | + | chr8_4:49064869-49064888 | Msa1330030:intron | 50.0% | |
AGTGACAGTGTTGTCCATGG+AGG | - | chr8_4:49064940-49064959 | None:intergenic | 50.0% | |
CACAGTGACAGTGTTGTCCA+TGG | - | chr8_4:49064943-49064962 | None:intergenic | 50.0% | |
CTATAAAGCATGGGTACCCG+TGG | + | chr8_4:49065181-49065200 | Msa1330030:intron | 50.0% | |
ACCTACTTGCGTAACCACCA+CGG | - | chr8_4:49065201-49065220 | None:intergenic | 50.0% | |
CCTTTGCCACAAGTCTTGCA+GGG | - | chr8_4:49065815-49065834 | None:intergenic | 50.0% | |
TCCTTTGCCACAAGTCTTGC+AGG | - | chr8_4:49065816-49065835 | None:intergenic | 50.0% | |
! | GGCAAGTTGGGAAGAACAAG+AGG | - | chr8_4:49065924-49065943 | None:intergenic | 50.0% |
TCCACTGCACTTGGCAAGTT+GGG | - | chr8_4:49065936-49065955 | None:intergenic | 50.0% | |
AGTCAGTTCTCCACTGCACT+TGG | - | chr8_4:49065945-49065964 | None:intergenic | 50.0% | |
!! | CTTTTTGGGGGATTCTGGGT+TGG | + | chr8_4:49066185-49066204 | Msa1330030:intron | 50.0% |
ATCGTGAAACTCGTCAGAGG+GGG | - | chr8_4:49067024-49067043 | None:intergenic | 50.0% | |
! | TTTGGAGTCAGATCCCGACA+GGG | - | chr8_4:49067050-49067069 | None:intergenic | 50.0% |
GGCACCAGAGAACTTCCATA+AGG | - | chr8_4:49067159-49067178 | None:intergenic | 50.0% | |
ATGTTGCCTTCGGGATTGTG+AGG | + | chr8_4:49067275-49067294 | Msa1330030:intron | 50.0% | |
CGTACACGTGGAAGCTTACT+TGG | - | chr8_4:49067677-49067696 | None:intergenic | 50.0% | |
AGTAAGCTTCCACGTGTACG+GGG | + | chr8_4:49067677-49067696 | Msa1330030:intron | 50.0% | |
GGACGGGCCAACATACATAT+AGG | - | chr8_4:49068244-49068263 | None:intergenic | 50.0% | |
ATGTATGTTGGCCCGTCCAT+TGG | + | chr8_4:49068246-49068265 | Msa1330030:intron | 50.0% | |
CAAATTCGTCCTTGCACACG+TGG | + | chr8_4:49069283-49069302 | Msa1330030:intron | 50.0% | |
! | CAATTTGGTGGTTGGACAGC+TGG | - | chr8_4:49069611-49069630 | None:intergenic | 50.0% |
!! | GCTTGTGTTGGGTTAGCCAT+AGG | - | chr8_4:49070178-49070197 | None:intergenic | 50.0% |
AGGATCATGGACCTTGATGG+TGG | + | chr8_4:49071300-49071319 | Msa1330030:intron | 50.0% | |
!! | TCATGGACCTTGATGGTGGT+TGG | + | chr8_4:49071304-49071323 | Msa1330030:intron | 50.0% |
TTCACCTCCAACCACCATCA+AGG | - | chr8_4:49071314-49071333 | None:intergenic | 50.0% | |
CATTGATATGCCCTCCTCCA+AGG | + | chr8_4:49073258-49073277 | Msa1330030:CDS | 50.0% | |
GATTGAGGAAGGGTCATCCT+TGG | - | chr8_4:49073278-49073297 | None:intergenic | 50.0% | |
GGCGGTGACATCTTACAGGT+TGG | - | chr8_4:49063560-49063579 | None:intergenic | 55.0% | |
TTGCGGCGGTGACATCTTAC+AGG | - | chr8_4:49063564-49063583 | None:intergenic | 55.0% | |
ACTGCCACCACGAAATTGGC+AGG | + | chr8_4:49063874-49063893 | Msa1330030:CDS | 55.0% | |
AGCTCCTGCCAATTTCGTGG+TGG | - | chr8_4:49063881-49063900 | None:intergenic | 55.0% | |
GTTAGTCCTTGCAGCAGCGA+CGG | + | chr8_4:49063902-49063921 | Msa1330030:CDS | 55.0% | |
GCAGCAGCTGAGAAATTGGG+AGG | + | chr8_4:49063928-49063947 | Msa1330030:CDS | 55.0% | |
GCGCCATGGCCAATTTGTGA+AGG | + | chr8_4:49064562-49064581 | Msa1330030:intron | 55.0% | |
! | TGTGACCTATGGTGACGCTG+TGG | - | chr8_4:49064868-49064887 | None:intergenic | 55.0% |
TAAAGCATGGGTACCCGTGG+TGG | + | chr8_4:49065184-49065203 | Msa1330030:intron | 55.0% | |
CCTACTTGCGTAACCACCAC+GGG | - | chr8_4:49065200-49065219 | None:intergenic | 55.0% | |
TGCAGCTGCAGTTGCAGTGT+CGG | + | chr8_4:49065522-49065541 | Msa1330030:intron | 55.0% | |
AGTCTTGCAGGGAAGGTGGT+AGG | - | chr8_4:49065804-49065823 | None:intergenic | 55.0% | |
CACAAGTCTTGCAGGGAAGG+TGG | - | chr8_4:49065808-49065827 | None:intergenic | 55.0% | |
CACCTTCCCTGCAAGACTTG+TGG | + | chr8_4:49065806-49065825 | Msa1330030:CDS | 55.0% | |
TGCCACAAGTCTTGCAGGGA+AGG | - | chr8_4:49065811-49065830 | None:intergenic | 55.0% | |
CCCTGCAAGACTTGTGGCAA+AGG | + | chr8_4:49065812-49065831 | Msa1330030:CDS | 55.0% | |
TGTGGCAAAGGAAGAGGAGC+AGG | + | chr8_4:49065824-49065843 | Msa1330030:CDS | 55.0% | |
TCCCAACTTGCCAAGTGCAG+TGG | + | chr8_4:49065932-49065951 | Msa1330030:intron | 55.0% | |
CTCCACTGCACTTGGCAAGT+TGG | - | chr8_4:49065937-49065956 | None:intergenic | 55.0% | |
!! | CTTTGGAGTCAGATCCCGAC+AGG | - | chr8_4:49067051-49067070 | None:intergenic | 55.0% |
!! | TGTCACGTTAAGCGCTGACG+TGG | + | chr8_4:49067647-49067666 | Msa1330030:intron | 55.0% |
CAAATTCGTCCCCGTACACG+TGG | - | chr8_4:49067689-49067708 | None:intergenic | 55.0% | |
AGTCAGCTTCCACGTGTGCA+AGG | - | chr8_4:49069295-49069314 | None:intergenic | 55.0% | |
TGCACACGTGGAAGCTGACT+TGG | + | chr8_4:49069295-49069314 | Msa1330030:intron | 55.0% | |
!! | TGGACCTTGATGGTGGTTGG+AGG | + | chr8_4:49071307-49071326 | Msa1330030:intron | 55.0% |
GGCGGTGACATCTTAGAGGT+TGG | - | chr8_4:49073179-49073198 | None:intergenic | 55.0% | |
CTGAGGCGGTGACATCTTAG+AGG | - | chr8_4:49073183-49073202 | None:intergenic | 55.0% | |
GAAGGGTCATCCTTGGAGGA+GGG | - | chr8_4:49073271-49073290 | None:intergenic | 55.0% | |
TGAGGAAGGGTCATCCTTGG+AGG | - | chr8_4:49073275-49073294 | None:intergenic | 55.0% | |
GCTGTGGACAAGCCAGCTAG+AGG | + | chr8_4:49064136-49064155 | Msa1330030:CDS | 60.0% | |
! | AGGGAGATGTCCCTTTGGGG+AGG | + | chr8_4:49064201-49064220 | Msa1330030:CDS | 60.0% |
GTCTGCCACAGCGTCACCAT+AGG | + | chr8_4:49064860-49064879 | Msa1330030:intron | 60.0% | |
CCCGTGGTGGTTACGCAAGT+AGG | + | chr8_4:49065197-49065216 | Msa1330030:intron | 60.0% | |
ATTGGGTAGCAGCTGCCTGC+TGG | + | chr8_4:49072632-49072651 | Msa1330030:intron | 60.0% | |
GGAAGGGTCATCCTTGGAGG+AGG | - | chr8_4:49073272-49073291 | None:intergenic | 60.0% | |
TGCTGTCCGTCGCTGCTGCA+AGG | - | chr8_4:49063911-49063930 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_4 | gene | 49063536 | 49073407 | 49063536 | ID=Msa1330030;Name=Msa1330030 |
chr8_4 | mRNA | 49063536 | 49073407 | 49063536 | ID=Msa1330030-mRNA-1;Parent=Msa1330030;Name=Msa1330030-mRNA-1;_AED=0.18;_eAED=0.21;_QI=0|0|0|1|0.2|0|6|0|374 |
chr8_4 | exon | 49063536 | 49063778 | 49063536 | ID=Msa1330030-mRNA-1:exon:14136;Parent=Msa1330030-mRNA-1 |
chr8_4 | exon | 49063791 | 49063990 | 49063791 | ID=Msa1330030-mRNA-1:exon:14137;Parent=Msa1330030-mRNA-1 |
chr8_4 | exon | 49064024 | 49064250 | 49064024 | ID=Msa1330030-mRNA-1:exon:14138;Parent=Msa1330030-mRNA-1 |
chr8_4 | exon | 49065721 | 49065945 | 49065721 | ID=Msa1330030-mRNA-1:exon:14139;Parent=Msa1330030-mRNA-1 |
chr8_4 | exon | 49073168 | 49073353 | 49073168 | ID=Msa1330030-mRNA-1:exon:14140;Parent=Msa1330030-mRNA-1 |
chr8_4 | exon | 49073364 | 49073407 | 49073364 | ID=Msa1330030-mRNA-1:exon:14141;Parent=Msa1330030-mRNA-1 |
chr8_4 | CDS | 49063536 | 49063778 | 49063536 | ID=Msa1330030-mRNA-1:cds;Parent=Msa1330030-mRNA-1 |
chr8_4 | CDS | 49063791 | 49063990 | 49063791 | ID=Msa1330030-mRNA-1:cds;Parent=Msa1330030-mRNA-1 |
chr8_4 | CDS | 49064024 | 49064250 | 49064024 | ID=Msa1330030-mRNA-1:cds;Parent=Msa1330030-mRNA-1 |
chr8_4 | CDS | 49065721 | 49065945 | 49065721 | ID=Msa1330030-mRNA-1:cds;Parent=Msa1330030-mRNA-1 |
chr8_4 | CDS | 49073168 | 49073353 | 49073168 | ID=Msa1330030-mRNA-1:cds;Parent=Msa1330030-mRNA-1 |
chr8_4 | CDS | 49073364 | 49073407 | 49073364 | ID=Msa1330030-mRNA-1:cds;Parent=Msa1330030-mRNA-1 |
Gene Sequence |
Protein sequence |