AlfalfaGEDB | Msa1336140

M. sativa cultivar zhongmu-4 / Msa1336140

KEGG: K11644
GO: GO:0000118 GO:0000122 GO:0000785 GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006476 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016569 GO:0016570 GO:0016575 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0033993 GO:0035601 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0097305 GO:0098732 GO:1901564 GO:1901700 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
PFAM: PF02671.24

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1336140	XP_003613438.2	86.111	108	8	1	21	121	28	135	6.61e-48	184

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1336140	sp\|O48686\|SNL3_ARATH	67.000	100	26	1	29	121	7	106	8.21e-33	132

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1336140	G7K6W4	86.111	108	8	1	21	121	28	135	3.16e-48	184

TFs/TRs:

Gene ID	Type	Classification
Msa1336140	TR	Others

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1336140	MtrunA17_Chr5g0415031	86.111	108	8	1	21	121	28	135	6.08e-52	184
Msa1336140	MtrunA17_Chr8g0364231	62.931	116	31	2	18	121	19	134	2.80e-37	141
Msa1336140	MtrunA17_Chr6g0452001	62.626	99	30	1	30	121	57	155	1.56e-30	122
Msa1336140	MtrunA17_Chr6g0452021	60.606	99	30	3	30	121	37	133	3.91e-26	107
Msa1336140	MtrunA17_Chr1g0206781	60.606	66	26	0	41	106	23	88	1.16e-23	94.0
Msa1336140	MtrunA17_Chr1g0206771	57.333	75	32	0	22	96	9	83	1.85e-23	95.1
Msa1336140	MtrunA17_Chr1g0206771	50.746	67	33	0	31	97	97	163	8.72e-15	71.6
Msa1336140	MtrunA17_Chr1g0205811	62.857	70	26	0	37	106	22	91	1.19e-22	91.3
Msa1336140	MtrunA17_Chr8g0364021	48.837	86	37	1	26	104	34	119	3.97e-20	87.8
Msa1336140	MtrunA17_Chr1g0156171	95.000	40	2	0	59	98	17	56	9.45e-20	83.6
Msa1336140	MtrunA17_Chr3g0077861	61.111	72	22	2	37	107	98	164	2.66e-19	83.6
Msa1336140	MtrunA17_Chr3g0077861	44.318	88	42	2	30	110	2	89	3.00e-11	61.2
Msa1336140	MtrunA17_Chr7g0218911	43.750	96	51	2	32	127	1	93	3.66e-19	82.0
Msa1336140	MtrunA17_Chr3g0077911	65.079	63	21	1	37	98	98	160	2.66e-18	80.9
Msa1336140	MtrunA17_Chr3g0077911	54.386	57	26	0	42	98	18	74	4.38e-12	63.5
Msa1336140	MtrunA17_Chr4g0075861	59.701	67	27	0	35	101	178	244	2.93e-18	84.7
Msa1336140	MtrunA17_Chr4g0075861	51.667	60	29	0	45	104	25	84	7.20e-13	68.6
Msa1336140	MtrunA17_Chr4g0075861	36.364	121	69	2	21	133	81	201	2.41e-12	67.0
Msa1336140	MtrunA17_Chr4g0075971	59.701	67	27	0	35	101	178	244	3.10e-18	85.5
Msa1336140	MtrunA17_Chr4g0075971	40.000	95	52	1	45	134	25	119	3.97e-13	70.1
Msa1336140	MtrunA17_Chr1g0205821	47.126	87	44	1	20	106	6	90	4.09e-18	80.5
Msa1336140	MtrunA17_Chr1g0205821	38.462	91	56	0	9	99	79	169	4.52e-15	72.4
Msa1336140	MtrunA17_Chr3g0077891	50.000	84	34	2	26	101	89	172	5.59e-18	80.1
Msa1336140	MtrunA17_Chr3g0077891	57.143	56	24	0	43	98	23	78	2.22e-12	64.7
Msa1336140	MtrunA17_Chr1g0205861	45.238	84	38	1	29	104	8	91	1.34e-16	74.7
Msa1336140	MtrunA17_Chr3g0077941	50.649	77	30	2	29	97	91	167	3.19e-15	72.8
Msa1336140	MtrunA17_Chr3g0077941	55.357	56	25	0	43	98	23	78	6.25e-12	63.5
Msa1336140	MtrunA17_Chr1g0209201	48.052	77	35	2	36	108	23	98	1.62e-14	69.7
Msa1336140	MtrunA17_Chr1g0205801	44.928	69	38	0	36	104	19	87	1.96e-14	68.6
Msa1336140	MtrunA17_Chr3g0077881	48.750	80	33	2	26	97	89	168	2.37e-14	70.1
Msa1336140	MtrunA17_Chr3g0077881	57.143	56	24	0	43	98	23	78	1.86e-12	64.7
Msa1336140	MtrunA17_Chr2g0328701	50.000	60	30	0	45	104	42	101	9.75e-14	67.0
Msa1336140	MtrunA17_Chr3g0077811	58.929	56	23	0	43	98	28	83	1.60e-13	66.2
Msa1336140	MtrunA17_Chr1g0205831	49.231	65	33	0	34	98	7	71	1.62e-13	67.8
Msa1336140	MtrunA17_Chr1g0205831	44.286	70	39	0	37	106	81	150	3.11e-12	64.3
Msa1336140	MtrunA17_Chr7g0218891	43.939	66	37	0	43	108	201	266	7.01e-12	65.1
Msa1336140	MtrunA17_Chr7g0218891	45.205	73	38	1	34	104	104	176	1.59e-11	63.9
Msa1336140	MtrunA17_Chr7g0256011	49.123	57	29	0	41	97	28	84	7.52e-12	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1336140	AT1G24190.3	67.000	100	26	1	29	121	7	106	7.38e-34	132
Msa1336140	AT1G24190.2	67.000	100	26	1	29	121	7	106	8.18e-34	132
Msa1336140	AT1G24190.1	67.000	100	26	1	29	121	7	106	8.34e-34	132
Msa1336140	AT1G70060.2	68.317	101	24	2	29	121	7	107	4.30e-33	130
Msa1336140	AT1G70060.1	68.317	101	24	2	29	121	7	107	4.30e-33	130
Msa1336140	AT3G01320.1	63.725	102	29	2	27	121	48	148	2.05e-30	122
Msa1336140	AT3G01320.2	63.725	102	29	2	27	121	48	148	2.14e-30	122
Msa1336140	AT1G59890.1	68.235	85	25	1	37	121	53	135	1.09e-28	117
Msa1336140	AT1G59890.2	68.235	85	25	1	37	121	53	135	1.09e-28	117
Msa1336140	AT1G59890.3	68.235	85	25	1	37	121	53	135	1.10e-28	117
Msa1336140	AT1G59890.4	68.235	85	25	1	37	121	53	135	1.25e-28	117
Msa1336140	AT1G10450.2	67.105	76	25	0	37	112	41	116	3.42e-28	115
Msa1336140	AT1G10450.1	67.105	76	25	0	37	112	41	116	3.42e-28	115
Msa1336140	AT1G10450.3	67.105	76	25	0	37	112	92	167	3.80e-28	115
Msa1336140	AT5G15020.1	60.606	99	30	2	30	121	46	142	1.28e-27	114
Msa1336140	AT5G15020.2	60.606	99	30	2	30	121	46	142	1.42e-27	114
Msa1336140	AT5G15025.1	51.546	97	38	2	14	103	27	121	2.73e-22	90.9
Msa1336140	AT1G70030.3	50.000	102	38	3	30	120	16	115	2.66e-20	85.5
Msa1336140	AT1G70030.2	43.243	111	54	2	30	133	16	124	6.03e-20	85.1
Msa1336140	AT1G70030.1	45.082	122	47	4	30	133	5	124	6.78e-20	85.5
Msa1336140	AT1G24200.1	46.000	100	44	2	29	121	7	103	7.04e-19	83.6
Msa1336140	AT4G12020.1	59.420	69	27	1	37	105	316	383	2.52e-17	83.6
Msa1336140	AT4G12020.9	59.420	69	27	1	37	105	316	383	2.52e-17	83.6
Msa1336140	AT4G12020.2	59.420	69	27	1	37	105	316	383	2.61e-17	83.6
Msa1336140	AT4G12020.4	59.420	69	27	1	37	105	316	383	2.75e-17	83.6
Msa1336140	AT4G12020.6	59.420	69	27	1	37	105	316	383	2.76e-17	83.6
Msa1336140	AT4G12020.8	59.420	69	27	1	37	105	316	383	2.76e-17	83.6
Msa1336140	AT4G12020.10	59.420	69	27	1	37	105	316	383	2.80e-17	83.6
Msa1336140	AT4G12020.3	59.420	69	27	1	37	105	316	383	2.80e-17	83.6
Msa1336140	AT4G12020.7	59.420	69	27	1	37	105	316	383	2.81e-17	83.6
Msa1336140	AT4G12020.5	59.420	69	27	1	37	105	249	316	2.90e-17	83.2
Msa1336140	AT4G12020.11	59.420	69	27	1	37	105	316	383	3.01e-17	83.2
Msa1336140	AT1G27220.1	55.738	61	27	0	37	97	22	82	1.91e-16	76.6
Msa1336140	AT1G27250.1	55.000	60	27	0	37	96	29	88	1.28e-15	73.2
Msa1336140	AT5G15040.1	45.588	68	37	0	36	103	10	77	8.03e-15	69.3
Msa1336140	AT5G15040.3	45.588	68	37	0	36	103	10	77	8.03e-15	69.3
Msa1336140	AT5G15040.2	45.588	68	37	0	36	103	10	77	8.03e-15	69.3
Msa1336140	AT5G35610.1	55.000	60	27	0	37	96	18	77	1.61e-12	65.1

Find 83 sgRNAs with CRISPR-Local

Find 263 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCATGTTTACAAGTCATTTC+TGG	0.210390	tig0000801:+27449	Msa1336140:CDS
ATGTTAAGTAACAAACATTT+TGG	0.219851	tig0000801:-29656	None:intergenic
AAGCTTCTTCTTACCGAATA+TGG	0.221899	tig0000801:-28742	None:intergenic
ATTGATGTGCCTTCATATTC+AGG	0.226307	tig0000801:+29244	Msa1336140:CDS
ATCTGATATACCATCAAATT+CGG	0.282664	tig0000801:+29442	Msa1336140:CDS
ACTCGATTTCTTTCACAAAA+AGG	0.282843	tig0000801:-29051	None:intergenic
CCTCTTTGCAAGAGTTAGAT+AGG	0.314175	tig0000801:+28809	Msa1336140:CDS
TATAAACTTCCCGAATTTGA+TGG	0.319912	tig0000801:-29452	None:intergenic
CCTTTGTCTAATATTTCTAA+TGG	0.326976	tig0000801:+28835	Msa1336140:CDS
AGCAATTGACCAAGTTGTTC+GGG	0.337050	tig0000801:+25978	Msa1336140:five_prime_UTR
CCTTTGTCTCGCATTACTAA+TGG	0.357024	tig0000801:+28612	Msa1336140:CDS
GCTGATTATGTGGCTATGTT+TGG	0.359286	tig0000801:+29535	Msa1336140:three_prime_UTR
CGTTCGTCATTCACAGTGAT+TGG	0.363430	tig0000801:-29199	None:intergenic
GAATGTGCCTTCTTATTTGA+AGG	0.371628	tig0000801:+26170	Msa1336140:CDS
GGAAGATTGGCATTCATAGA+AGG	0.377655	tig0000801:-28788	None:intergenic
TTATTAAGAAGGCTCCAAAA+AGG	0.389761	tig0000801:+28520	Msa1336140:intron
AAGCAATTGACCAAGTTGTT+CGG	0.394439	tig0000801:+25977	Msa1336140:five_prime_UTR
AGCGGGCTTGATTCTCATAA+AGG	0.396639	tig0000801:-29515	None:intergenic
GGTTCCTTCGCCACCATGAT+TGG	0.396981	tig0000801:+25397	Msa1336140:five_prime_UTR
ATCATCCCACACACCATATT+CGG	0.400509	tig0000801:+28729	Msa1336140:CDS
TAAGATCAAGTTTCAAGGTC+CGG	0.429714	tig0000801:+26901	Msa1336140:intron
ATCTCGATTTGGCGGTTGCC+CGG	0.433695	tig0000801:-26920	None:intergenic
ACTCTTGCAAAGAGGAAGAT+TGG	0.441241	tig0000801:-28801	None:intergenic
TAGATGGTCATGCGAGTGTC+AGG	0.444980	tig0000801:+25954	Msa1336140:intron
TTCTCTAAGATCAAGTTTCA+AGG	0.445375	tig0000801:+26896	Msa1336140:intron
CGAAATTATCTTCGCATACC+TGG	0.448513	tig0000801:-29415	None:intergenic
TCTGATATACCATCAAATTC+GGG	0.450281	tig0000801:+29443	Msa1336140:CDS
AGGGTAATCTCATGGCCCTT+TGG	0.454966	tig0000801:-27226	None:intergenic
GGTCATAGAGACTTGATCTT+GGG	0.467943	tig0000801:+27187	Msa1336140:CDS
ACGATCTATATTGAGACAAC+TGG	0.469968	tig0000801:-29489	None:intergenic
CTCATGGCCCTTTGGCAGAA+AGG	0.476655	tig0000801:-27218	None:intergenic
GAGAGCTTCCCCGAACAACT+TGG	0.487981	tig0000801:-25987	None:intergenic
TTTATGCAGACTCGGTTTCA+GGG	0.488613	tig0000801:+27420	Msa1336140:intron
AACAATACCTTCAAATAAGA+AGG	0.490879	tig0000801:-26177	None:intergenic
AATCTGACATAAGAAGGAAA+TGG	0.498845	tig0000801:+25372	Msa1336140:five_prime_UTR
AATCAAGCCCGCTGATTATG+TGG	0.500684	tig0000801:+29525	Msa1336140:three_prime_UTR
ACCTGGTCATGAACAATGCC+GGG	0.505161	tig0000801:-29398	None:intergenic
AAGATCAAGTTTCAAGGTCC+GGG	0.505302	tig0000801:+26902	Msa1336140:intron
TCATAGAAGGGGCTGATGGT+TGG	0.508105	tig0000801:-28775	None:intergenic
AGGTCATAGAGACTTGATCT+TGG	0.513611	tig0000801:+27186	Msa1336140:CDS
ATCGTGAATCTGACATAAGA+AGG	0.513777	tig0000801:+25366	Msa1336140:five_prime_UTR
GCTGATGGAGCTGTGGACTT+CGG	0.515082	tig0000801:+26142	Msa1336140:exon
TACCTGGTCATGAACAATGC+CGG	0.520481	tig0000801:-29399	None:intergenic
TTCTTACCGAATATGGTGTG+TGG	0.522091	tig0000801:-28735	None:intergenic
TTTAACACCTTTCTGCCAAA+GGG	0.527079	tig0000801:+27211	Msa1336140:CDS
AGATAAGAAGGAAAAGTATG+AGG	0.539361	tig0000801:+26984	Msa1336140:CDS
ATTTAACACCTTTCTGCCAA+AGG	0.543196	tig0000801:+27210	Msa1336140:CDS
AATCGAGTTGTTCATTTCCG+AGG	0.545182	tig0000801:+29066	Msa1336140:CDS
GAACAAGTGCAGTGCATGAG+AGG	0.551918	tig0000801:+25343	Msa1336140:five_prime_UTR
TTGCTCATCCTCAGACGAAA+GGG	0.552798	tig0000801:-27245	None:intergenic
ACATCCAATCATGGTGGCGA+AGG	0.554046	tig0000801:-25401	None:intergenic
TGAGATTACCCTTTCGTCTG+AGG	0.555293	tig0000801:+27237	Msa1336140:CDS
ATAAACCAACCTGAATATGA+AGG	0.555545	tig0000801:-29253	None:intergenic
TCCCGGCATTGTTCATGACC+AGG	0.556625	tig0000801:+29397	Msa1336140:CDS
GAAGATTGGCATTCATAGAA+GGG	0.557607	tig0000801:-28787	None:intergenic
ATCACCCTGGTCTACAAAAG+AGG	0.559172	tig0000801:+27499	Msa1336140:CDS
AACATAGCCACATAATCAGC+GGG	0.563480	tig0000801:-29532	None:intergenic
GCATTCATAGAAGGGGCTGA+TGG	0.568861	tig0000801:-28779	None:intergenic
GCATTTCTGACATCCAATCA+TGG	0.574289	tig0000801:-25410	None:intergenic
ACTGACTACTAATGATGTCA+AGG	0.576783	tig0000801:+26951	Msa1336140:CDS
CCTATCTAACTCTTGCAAAG+AGG	0.581812	tig0000801:-28809	None:intergenic
TATGATAATGTACATGCTCC+CGG	0.585969	tig0000801:+29380	Msa1336140:CDS
CAATGATGGTGATACATGAC+TGG	0.587980	tig0000801:+25319	Msa1336140:five_prime_UTR
CATATTGAATACGTACAAGT+AGG	0.590087	tig0000801:+27473	Msa1336140:CDS
TACAAGTAGGCCTATCACCC+TGG	0.590486	tig0000801:+27486	Msa1336140:CDS
AACAATCGAAATTGTTACGA+AGG	0.590977	tig0000801:-29586	None:intergenic
CAGACGAAAGGGTAATCTCA+TGG	0.592774	tig0000801:-27234	None:intergenic
GTTGCTCATCCTCAGACGAA+AGG	0.601293	tig0000801:-27246	None:intergenic
TGCACCGCTTAACACTCCAT+TGG	0.612097	tig0000801:+25449	Msa1336140:five_prime_UTR
TCTTACCGAATATGGTGTGT+GGG	0.613886	tig0000801:-28734	None:intergenic
GTTACCAATGGAGTGTTAAG+CGG	0.623464	tig0000801:-25453	None:intergenic
GGGCAACCGCCAAATCGAGA+TGG	0.627067	tig0000801:+26922	Msa1336140:CDS
TGATGAACTTACTTATCACA+TGG	0.627391	tig0000801:-25793	None:intergenic
TGACATAAGAAGGAAATGGA+TGG	0.629635	tig0000801:+25376	Msa1336140:five_prime_UTR
ATTTGTAGAGTTGATACTGA+TGG	0.633224	tig0000801:+27133	Msa1336140:intron
CCATTAGTAATGCGAGACAA+AGG	0.637393	tig0000801:-28612	None:intergenic
AAGATTGGCATTCATAGAAG+GGG	0.643466	tig0000801:-28786	None:intergenic
CCATTAGAAATATTAGACAA+AGG	0.665835	tig0000801:-28835	None:intergenic
AAACATAGCCACATAATCAG+CGG	0.677195	tig0000801:-29533	None:intergenic
GCAATTGACCAAGTTGTTCG+GGG	0.683663	tig0000801:+25979	Msa1336140:five_prime_UTR
TGGTGTCATTGAAAGAGTGA+AGG	0.685356	tig0000801:+27153	Msa1336140:CDS
TGTGAATGACGAACGATGTG+AGG	0.703075	tig0000801:+29207	Msa1336140:CDS
TTTCTGACATCCAATCATGG+TGG	0.753786	tig0000801:-25407	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTTTGTTTATGTATATAT+TGG	+	tig0000801:25928-25947	Msa1336140:intron	10.0%
!!	ATAAATTGTAAATCAAAAAA+TGG	-	tig0000801:28659-28678	None:intergenic	10.0%
!!!	TTAATAGTTTTAATTTTGAG+CGG	+	tig0000801:27387-27406	Msa1336140:intron	15.0%
!!	TTATTAAAAGTCTAGAAAAA+GGG	-	tig0000801:27844-27863	None:intergenic	15.0%
!!	ATTATTAAAAGTCTAGAAAA+AGG	-	tig0000801:27845-27864	None:intergenic	15.0%
!!!	AAGATCAAAGAAAATTATTT+TGG	+	tig0000801:28151-28170	Msa1336140:intron	15.0%
!!	ATTTAACACTATTATTAAGA+AGG	+	tig0000801:28509-28528	Msa1336140:intron	15.0%
!!	ATTTATTTCAAAGATGTTTA+TGG	+	tig0000801:28673-28692	Msa1336140:intron	15.0%
!!	GAAAAGAAAAAATACAATGA+TGG	+	tig0000801:25305-25324	Msa1336140:five_prime_UTR	20.0%
!!	TTTAGTTGATTATATGTTCT+TGG	+	tig0000801:25511-25530	Msa1336140:intron	20.0%
!!	TATATTGTTGTAGAATACAT+TGG	+	tig0000801:25622-25641	Msa1336140:intron	20.0%
!!	ATGTGAAATGAAATAAATGA+TGG	+	tig0000801:25875-25894	Msa1336140:intron	20.0%
!!!	AAATGATGGTGTTTTTTTTT+TGG	+	tig0000801:25889-25908	Msa1336140:intron	20.0%
!!	ATGTATATATTGGAATTAGA+TGG	+	tig0000801:25938-25957	Msa1336140:intron	20.0%
!!	ATATTGCTTTCATGTATTAT+AGG	-	tig0000801:26474-26493	None:intergenic	20.0%
!!!	GGTAATTTTAAATCTTATAG+CGG	-	tig0000801:26520-26539	None:intergenic	20.0%
!!	ATGAATTTGAACATAAACTT+TGG	-	tig0000801:26541-26560	None:intergenic	20.0%
!!	TAAATAAGAACAACTACATT+AGG	-	tig0000801:26606-26625	None:intergenic	20.0%
!!!	CATAAACTTTTGATATTTGA+AGG	+	tig0000801:26638-26657	Msa1336140:intron	20.0%
!!!	TTAGTGATTTTATTAAAGCT+TGG	+	tig0000801:26666-26685	Msa1336140:intron	20.0%
!!!	GTTGTTTTTGTGTATATATT+GGG	+	tig0000801:27058-27077	Msa1336140:intron	20.0%
!!!	AATTGATTTGTTTATCCTTT+TGG	+	tig0000801:27107-27126	Msa1336140:intron	20.0%
!!!	AGACTTTTAATAATTGTATC+AGG	+	tig0000801:27851-27870	Msa1336140:intron	20.0%
!!	CAAACTATAAATTTCGTTTA+TGG	-	tig0000801:27988-28007	None:intergenic	20.0%
!!!	TTTATAGTTTGTGTGTTTTA+TGG	+	tig0000801:27997-28016	Msa1336140:intron	20.0%
!!	TGGTAATAATTCTTGATTTA+TGG	+	tig0000801:28171-28190	Msa1336140:intron	20.0%
!!	TACACATAAGTTTATATCTT+TGG	+	tig0000801:28246-28265	Msa1336140:intron	20.0%
!!	TTATAATAAAACATGTGAGA+AGG	-	tig0000801:28423-28442	None:intergenic	20.0%
!!	CTTAATAATAGTGTTAAATC+AGG	-	tig0000801:28508-28527	None:intergenic	20.0%
!!!	ATGTTAAGTAACAAACATTT+TGG	-	tig0000801:29659-29678	None:intergenic	20.0%
!	AATATGAGAATTGAAAGAGA+CGG	-	tig0000801:25483-25502	None:intergenic	25.0%
!	ATCAAAAATTTGTCATCTCT+GGG	-	tig0000801:25586-25605	None:intergenic	25.0%
!	AATCAAAAATTTGTCATCTC+TGG	-	tig0000801:25587-25606	None:intergenic	25.0%
!!!	GGTTTGTTATTAATTCTGTT+TGG	+	tig0000801:25643-25662	Msa1336140:intron	25.0%
!	AATAAGCTGAAAACAACTTA+TGG	+	tig0000801:25692-25711	Msa1336140:intron	25.0%
!!!	GCTTTGTTAAACAGTTTTAT+AGG	+	tig0000801:25739-25758	Msa1336140:intron	25.0%
!!	ACAAAAATCACCATCATTTT+CGG	-	tig0000801:25916-25935	None:intergenic	25.0%
!!	AATTTACAGATTTTTGCTGA+TGG	+	tig0000801:26127-26146	Msa1336140:exon	25.0%
!	AACAATACCTTCAAATAAGA+AGG	-	tig0000801:26180-26199	None:intergenic	25.0%
!	AAGAGCAAATATTAGTGATA+TGG	+	tig0000801:26264-26283	Msa1336140:intron	25.0%
!	TGGACTTTATATATGTTTCA+AGG	+	tig0000801:26686-26705	Msa1336140:intron	25.0%
!	TTCAAGGATTTATTCTAATG+TGG	+	tig0000801:26702-26721	Msa1336140:intron	25.0%
!!!	GGATATTTTTCAAGATAAGA+AGG	+	tig0000801:26972-26991	Msa1336140:CDS	25.0%
!!!	TGAAAGATTTTAAAGCACAA+AGG	+	tig0000801:27022-27041	Msa1336140:CDS	25.0%
!	ATATATACACAAAAACAACG+TGG	-	tig0000801:27057-27076	None:intergenic	25.0%
!!!	CGTTGTTTTTGTGTATATAT+TGG	+	tig0000801:27057-27076	Msa1336140:intron	25.0%
!!!	TCAAACTTCTTTTTTAGTTG+AGG	-	tig0000801:27271-27290	None:intergenic	25.0%
!!	ATTTTATGAAGCTATGAGTT+AGG	+	tig0000801:27291-27310	Msa1336140:intron	25.0%
!	TAGAATGTTTGTGAGTTTAA+TGG	+	tig0000801:27330-27349	Msa1336140:intron	25.0%
!	TACAATAAAATCTGTAGCTT+TGG	+	tig0000801:27756-27775	Msa1336140:intron	25.0%
!!	GCATAACACTGTTAATTTTA+TGG	+	tig0000801:27904-27923	Msa1336140:intron	25.0%
!!	TCTATAGATTTTGCTACATT+TGG	+	tig0000801:28027-28046	Msa1336140:intron	25.0%
!	AATCTATATCAGAAAGTCTT+TGG	+	tig0000801:28286-28305	Msa1336140:intron	25.0%
!	AATAATAGTGTTAAATCAGG+TGG	-	tig0000801:28505-28524	None:intergenic	25.0%
!	CCATTAGAAATATTAGACAA+AGG	-	tig0000801:28838-28857	None:intergenic	25.0%
!!	CCTTTGTCTAATATTTCTAA+TGG	+	tig0000801:28835-28854	Msa1336140:CDS	25.0%
!	AATTTGAAAGGCAGTAAAAT+CGG	+	tig0000801:28890-28909	Msa1336140:intron	25.0%
!	GTGTATTTCCCAATTAATAA+GGG	-	tig0000801:29150-29169	None:intergenic	25.0%
!	AGTGTATTTCCCAATTAATA+AGG	-	tig0000801:29151-29170	None:intergenic	25.0%
!!!	TTAAGTTCCCATATTTTTGA+AGG	-	tig0000801:29332-29351	None:intergenic	25.0%
!	TTACTATTCATCGTCTATAT+AGG	+	tig0000801:29353-29372	Msa1336140:intron	25.0%
!	TACTATTCATCGTCTATATA+GGG	+	tig0000801:29354-29373	Msa1336140:intron	25.0%
!	ATCTGATATACCATCAAATT+CGG	+	tig0000801:29442-29461	Msa1336140:CDS	25.0%
	AATCTGACATAAGAAGGAAA+TGG	+	tig0000801:25372-25391	Msa1336140:five_prime_UTR	30.0%
	TCAAAAATTTGTCATCTCTG+GGG	-	tig0000801:25585-25604	None:intergenic	30.0%
!!	AGTTTTATAGGTGTTTATGC+AGG	+	tig0000801:25751-25770	Msa1336140:intron	30.0%
	TGATGAACTTACTTATCACA+TGG	-	tig0000801:25796-25815	None:intergenic	30.0%
!!!	TTTTTTTGGACCGAAAATGA+TGG	+	tig0000801:25903-25922	Msa1336140:intron	30.0%
	GAACCTTATGTTGCAAAAAA+TGG	+	tig0000801:26028-26047	Msa1336140:five_prime_UTR	30.0%
!!!	ACACCATTTTTTGCAACATA+AGG	-	tig0000801:26034-26053	None:intergenic	30.0%
	TTGTTTACTTAATCTGCATC+AGG	+	tig0000801:26195-26214	Msa1336140:intron	30.0%
	TTCTTTGTGTTCACATGTAT+AGG	+	tig0000801:26234-26253	Msa1336140:intron	30.0%
	TCTTTGTGTTCACATGTATA+GGG	+	tig0000801:26235-26254	Msa1336140:intron	30.0%
!	TCTCAATAGCATTTCAAGTA+AGG	-	tig0000801:26392-26411	None:intergenic	30.0%
	TTAATCAAACCTGAGATTGT+TGG	-	tig0000801:26775-26794	None:intergenic	30.0%
	TCATTTCTTTATTGCTCCTT+CGG	-	tig0000801:26820-26839	None:intergenic	30.0%
!!	TTCTCTAAGATCAAGTTTCA+AGG	+	tig0000801:26896-26915	Msa1336140:intron	30.0%
!	AGATAAGAAGGAAAAGTATG+AGG	+	tig0000801:26984-27003	Msa1336140:CDS	30.0%
!	TTTTGTGTATATATTGGGAG+AGG	+	tig0000801:27063-27082	Msa1336140:intron	30.0%
	TTTGTGTATATATTGGGAGA+GGG	+	tig0000801:27064-27083	Msa1336140:intron	30.0%
!!	ATTTGTAGAGTTGATACTGA+TGG	+	tig0000801:27133-27152	Msa1336140:intron	30.0%
!!!	AGTTTTAATTTTGAGCGGAA+TGG	+	tig0000801:27392-27411	Msa1336140:intron	30.0%
	TCATGTTTACAAGTCATTTC+TGG	+	tig0000801:27449-27468	Msa1336140:CDS	30.0%
	CATATTGAATACGTACAAGT+AGG	+	tig0000801:27473-27492	Msa1336140:CDS	30.0%
	GTCAGGAAAATTTGTAATGT+TGG	+	tig0000801:27536-27555	Msa1336140:intron	30.0%
	TACACATAAGTGTATTTGCA+CGG	+	tig0000801:27603-27622	Msa1336140:intron	30.0%
	TTTATACAAACCAAGTTTGC+AGG	+	tig0000801:27664-27683	Msa1336140:intron	30.0%
	TTATACAAACCAAGTTTGCA+GGG	+	tig0000801:27665-27684	Msa1336140:intron	30.0%
!!!	ATTTTAATTCCCTGCAAACT+TGG	-	tig0000801:27677-27696	None:intergenic	30.0%
	TAAAAGTCTAGAAAAAGGGA+GGG	-	tig0000801:27840-27859	None:intergenic	30.0%
	TTAAAAGTCTAGAAAAAGGG+AGG	-	tig0000801:27841-27860	None:intergenic	30.0%
	AAAATCACTATCCTCTTATG+GGG	-	tig0000801:27931-27950	None:intergenic	30.0%
	CAAAATCACTATCCTCTTAT+GGG	-	tig0000801:27932-27951	None:intergenic	30.0%
	ATGCTAAAATGACATATGTC+TGG	-	tig0000801:28120-28139	None:intergenic	30.0%
!!!	ATGTCATTTTAGCATGCTAT+TGG	+	tig0000801:28125-28144	Msa1336140:intron	30.0%
!	TATATCTTTGGTGTATCTCT+TGG	+	tig0000801:28258-28277	Msa1336140:intron	30.0%
	TCTGACATAGTAGTATATGA+TGG	-	tig0000801:28327-28346	None:intergenic	30.0%
	ATACTACTATGTCAGAAGTT+TGG	+	tig0000801:28331-28350	Msa1336140:intron	30.0%
	TGAAGATTTATAAAGTCAGG+TGG	-	tig0000801:28366-28385	None:intergenic	30.0%
	ACCTGACTTTATAAATCTTC+AGG	+	tig0000801:28365-28384	Msa1336140:intron	30.0%
	TTATTAAGAAGGCTCCAAAA+AGG	+	tig0000801:28520-28539	Msa1336140:intron	30.0%
!	CTCACTACAATCATCATTTT+CGG	-	tig0000801:28556-28575	None:intergenic	30.0%
!!	TGAGCTTAGTTTGAACTTTT+TGG	+	tig0000801:28572-28591	Msa1336140:CDS	30.0%
	CGTTCATTGTATGCAAATAT+GGG	-	tig0000801:28931-28950	None:intergenic	30.0%
	TCGTTCATTGTATGCAAATA+TGG	-	tig0000801:28932-28951	None:intergenic	30.0%
	AAACTGCACACAAAAAAGAT+TGG	-	tig0000801:29014-29033	None:intergenic	30.0%
	ACTCGATTTCTTTCACAAAA+AGG	-	tig0000801:29054-29073	None:intergenic	30.0%
	ATAAACCAACCTGAATATGA+AGG	-	tig0000801:29256-29275	None:intergenic	30.0%
	TTCACAAGCCTTCAAAAATA+TGG	+	tig0000801:29321-29340	Msa1336140:intron	30.0%
	TCACAAGCCTTCAAAAATAT+GGG	+	tig0000801:29322-29341	Msa1336140:intron	30.0%
	ACTATTCATCGTCTATATAG+GGG	+	tig0000801:29355-29374	Msa1336140:intron	30.0%
	TCTGATATACCATCAAATTC+GGG	+	tig0000801:29443-29462	Msa1336140:CDS	30.0%
	TATAAACTTCCCGAATTTGA+TGG	-	tig0000801:29455-29474	None:intergenic	30.0%
	AACAATCGAAATTGTTACGA+AGG	-	tig0000801:29589-29608	None:intergenic	30.0%
	ATCGTGAATCTGACATAAGA+AGG	+	tig0000801:25366-25385	Msa1336140:five_prime_UTR	35.0%
	TGACATAAGAAGGAAATGGA+TGG	+	tig0000801:25376-25395	Msa1336140:five_prime_UTR	35.0%
	TTGGTATGTTATGCTCATGA+GGG	+	tig0000801:25530-25549	Msa1336140:intron	35.0%
	AAGCAATTGACCAAGTTGTT+CGG	+	tig0000801:25977-25996	Msa1336140:five_prime_UTR	35.0%
!	GAATGTGCCTTCTTATTTGA+AGG	+	tig0000801:26170-26189	Msa1336140:CDS	35.0%
	CTTTGTGTTCACATGTATAG+GGG	+	tig0000801:26236-26255	Msa1336140:intron	35.0%
	TTTGTGTTCACATGTATAGG+GGG	+	tig0000801:26237-26256	Msa1336140:intron	35.0%
	ACGCAAATCATGTGATTGTT+AGG	+	tig0000801:26315-26334	Msa1336140:intron	35.0%
	TAGAAACGTGCGTATATCTT+AGG	+	tig0000801:26418-26437	Msa1336140:intron	35.0%
	AGAAACGTGCGTATATCTTA+GGG	+	tig0000801:26419-26438	Msa1336140:intron	35.0%
	TTGAGCGTGATCTTATCATA+TGG	-	tig0000801:26859-26878	None:intergenic	35.0%
	TAAGATCAAGTTTCAAGGTC+CGG	+	tig0000801:26901-26920	Msa1336140:intron	35.0%
!	AGTTTTTGACCATCTCGATT+TGG	-	tig0000801:26934-26953	None:intergenic	35.0%
	ACTGACTACTAATGATGTCA+AGG	+	tig0000801:26951-26970	Msa1336140:CDS	35.0%
!!	GGAAAAGTATGAGGACTTTT+TGG	+	tig0000801:26993-27012	Msa1336140:CDS	35.0%
!	AAAGTATGAGGACTTTTTGG+AGG	+	tig0000801:26996-27015	Msa1336140:CDS	35.0%
	TTGTGTATATATTGGGAGAG+GGG	+	tig0000801:27065-27084	Msa1336140:intron	35.0%
	AACTCTACAAATGCACCAAA+AGG	-	tig0000801:27125-27144	None:intergenic	35.0%
!	AGAGTGAAGGAACTTTTTAG+AGG	+	tig0000801:27166-27185	Msa1336140:CDS	35.0%
	ATTTAACACCTTTCTGCCAA+AGG	+	tig0000801:27210-27229	Msa1336140:CDS	35.0%
	TTTAACACCTTTCTGCCAAA+GGG	+	tig0000801:27211-27230	Msa1336140:CDS	35.0%
	AGGTATGTACTGTTATAGTC+AGG	+	tig0000801:27519-27538	Msa1336140:intron	35.0%
	TTGCACGGAATTTGTAATGT+TGG	+	tig0000801:27618-27637	Msa1336140:intron	35.0%
	ATTGTCTGCACACAAGTATA+TGG	+	tig0000801:27718-27737	Msa1336140:intron	35.0%
	ATGTTATTGCTTGCAAAGCA+TGG	-	tig0000801:27810-27829	None:intergenic	35.0%
!	AATTTTATGGACCCCATAAG+AGG	+	tig0000801:27917-27936	Msa1336140:intron	35.0%
	GCAAAATCACTATCCTCTTA+TGG	-	tig0000801:27933-27952	None:intergenic	35.0%
	TACATTTGGCCATAAGTTAG+AGG	+	tig0000801:28041-28060	Msa1336140:intron	35.0%
!	CATGGTTTTCCTCTAACTTA+TGG	-	tig0000801:28053-28072	None:intergenic	35.0%
	AATCTTATTGCTTGCAAGCA+TGG	-	tig0000801:28071-28090	None:intergenic	35.0%
!	TGCAAGCAATAAGATTTGCT+AGG	+	tig0000801:28075-28094	Msa1336140:intron	35.0%
	AGTATAGTTGCTTGTAAACG+TGG	-	tig0000801:28201-28220	None:intergenic	35.0%
	CTTATGTGTAGAGTGTAATC+AGG	-	tig0000801:28236-28255	None:intergenic	35.0%
	GCCTGAAGATTTATAAAGTC+AGG	-	tig0000801:28369-28388	None:intergenic	35.0%
	GAGAAGGAGAGAAATAAACT+GGG	-	tig0000801:28407-28426	None:intergenic	35.0%
	TGAGAAGGAGAGAAATAAAC+TGG	-	tig0000801:28408-28427	None:intergenic	35.0%
!	AAAAGAGGTGCATCAAACAT+GGG	-	tig0000801:28478-28497	None:intergenic	35.0%
!	AAAAAGAGGTGCATCAAACA+TGG	-	tig0000801:28479-28498	None:intergenic	35.0%
	AAATCAGGTGGATGAAAAAG+AGG	-	tig0000801:28493-28512	None:intergenic	35.0%
	AAGCTTCTTCTTACCGAATA+TGG	-	tig0000801:28745-28764	None:intergenic	35.0%
	AAGATTGGCATTCATAGAAG+GGG	-	tig0000801:28789-28808	None:intergenic	35.0%
	GAAGATTGGCATTCATAGAA+GGG	-	tig0000801:28790-28809	None:intergenic	35.0%
	CTAATGGTAATCAGAAATGC+TGG	+	tig0000801:28851-28870	Msa1336140:intron	35.0%
	CTGCCTTTCAAATTCAATTG+CGG	-	tig0000801:28884-28903	None:intergenic	35.0%
	TACCACTATAAGAACAGCTA+AGG	-	tig0000801:28990-29009	None:intergenic	35.0%
!!!	TTTTGTAGAGAGTATTTCCC+AGG	-	tig0000801:29102-29121	None:intergenic	35.0%
!!	TTAATAAGGGTGTCCTTGAA+CGG	-	tig0000801:29137-29156	None:intergenic	35.0%
	TCAAGGACACCCTTATTAAT+TGG	+	tig0000801:29138-29157	Msa1336140:intron	35.0%
	CAAGGACACCCTTATTAATT+GGG	+	tig0000801:29139-29158	Msa1336140:intron	35.0%
	ATTGATGTGCCTTCATATTC+AGG	+	tig0000801:29244-29263	Msa1336140:CDS	35.0%
	CTATTCATCGTCTATATAGG+GGG	+	tig0000801:29356-29375	Msa1336140:intron	35.0%
!	TATGATAATGTACATGCTCC+CGG	+	tig0000801:29380-29399	Msa1336140:CDS	35.0%
	ACGATCTATATTGAGACAAC+TGG	-	tig0000801:29492-29511	None:intergenic	35.0%
	AAACATAGCCACATAATCAG+CGG	-	tig0000801:29536-29555	None:intergenic	35.0%
!	CAATGATGGTGATACATGAC+TGG	+	tig0000801:25319-25338	Msa1336140:five_prime_UTR	40.0%
	TTTCTGACATCCAATCATGG+TGG	-	tig0000801:25410-25429	None:intergenic	40.0%
	GCATTTCTGACATCCAATCA+TGG	-	tig0000801:25413-25432	None:intergenic	40.0%
!	GTTACCAATGGAGTGTTAAG+CGG	-	tig0000801:25456-25475	None:intergenic	40.0%
	AGAGACGGTTATGTTACCAA+TGG	-	tig0000801:25468-25487	None:intergenic	40.0%
	CTTGGTATGTTATGCTCATG+AGG	+	tig0000801:25529-25548	Msa1336140:intron	40.0%
	TGGTATGTTATGCTCATGAG+GGG	+	tig0000801:25531-25550	Msa1336140:intron	40.0%
	AGCAATTGACCAAGTTGTTC+GGG	+	tig0000801:25978-25997	Msa1336140:five_prime_UTR	40.0%
	TTGTGTTCACATGTATAGGG+GGG	+	tig0000801:26238-26257	Msa1336140:intron	40.0%
	GTTATTATGCGTGTGTCAAC+AGG	+	tig0000801:26286-26305	Msa1336140:intron	40.0%
	GAAACGTGCGTATATCTTAG+GGG	+	tig0000801:26420-26439	Msa1336140:intron	40.0%
	CAACTACATTAGGTTCTTCG+CGG	-	tig0000801:26596-26615	None:intergenic	40.0%
	ATTAACGTGCCAACAATCTC+AGG	+	tig0000801:26763-26782	Msa1336140:intron	40.0%
	AAGATCAAGTTTCAAGGTCC+GGG	+	tig0000801:26902-26921	Msa1336140:intron	40.0%
!!!	TTTTGACCATCTCGATTTGG+CGG	-	tig0000801:26931-26950	None:intergenic	40.0%
!!	TGGTGTCATTGAAAGAGTGA+AGG	+	tig0000801:27153-27172	Msa1336140:CDS	40.0%
	AGGTCATAGAGACTTGATCT+TGG	+	tig0000801:27186-27205	Msa1336140:CDS	40.0%
	GGTCATAGAGACTTGATCTT+GGG	+	tig0000801:27187-27206	Msa1336140:CDS	40.0%
	GAGTTAGGTGAACACGATAA+AGG	+	tig0000801:27306-27325	Msa1336140:intron	40.0%
!	TGGTTCCTTTTATGCAGACT+CGG	+	tig0000801:27412-27431	Msa1336140:intron	40.0%
	TGAAACCGAGTCTGCATAAA+AGG	-	tig0000801:27420-27439	None:intergenic	40.0%
!!	TTTTATGCAGACTCGGTTTC+AGG	+	tig0000801:27419-27438	Msa1336140:intron	40.0%
!	TTTATGCAGACTCGGTTTCA+GGG	+	tig0000801:27420-27439	Msa1336140:intron	40.0%
!	CATACCTCTTTTGTAGACCA+GGG	-	tig0000801:27506-27525	None:intergenic	40.0%
!	ACATACCTCTTTTGTAGACC+AGG	-	tig0000801:27507-27526	None:intergenic	40.0%
!	AGCAATATGTCAAGTTCTGG+AGG	-	tig0000801:27579-27598	None:intergenic	40.0%
	CACAGCAATATGTCAAGTTC+TGG	-	tig0000801:27582-27601	None:intergenic	40.0%
	TGTGTGCAGACAATGTAATG+AGG	-	tig0000801:27712-27731	None:intergenic	40.0%
	TGCACACAAGTATATGGCAT+TGG	+	tig0000801:27724-27743	Msa1336140:intron	40.0%
!	TCGGATGTTCGAATCCTTTT+TGG	-	tig0000801:28537-28556	None:intergenic	40.0%
	CCATTAGTAATGCGAGACAA+AGG	-	tig0000801:28615-28634	None:intergenic	40.0%
	CCTTTGTCTCGCATTACTAA+TGG	+	tig0000801:28612-28631	Msa1336140:CDS	40.0%
	ATCATCCCACACACCATATT+CGG	+	tig0000801:28729-28748	Msa1336140:CDS	40.0%
	TCTTACCGAATATGGTGTGT+GGG	-	tig0000801:28737-28756	None:intergenic	40.0%
	TTCTTACCGAATATGGTGTG+TGG	-	tig0000801:28738-28757	None:intergenic	40.0%
	GGAAGATTGGCATTCATAGA+AGG	-	tig0000801:28791-28810	None:intergenic	40.0%
	ACTCTTGCAAAGAGGAAGAT+TGG	-	tig0000801:28804-28823	None:intergenic	40.0%
	CCTATCTAACTCTTGCAAAG+AGG	-	tig0000801:28812-28831	None:intergenic	40.0%
	CCTCTTTGCAAGAGTTAGAT+AGG	+	tig0000801:28809-28828	Msa1336140:CDS	40.0%
	CTGCCGCAATTGAATTTGAA+AGG	+	tig0000801:28878-28897	Msa1336140:intron	40.0%
	AAAATCGGAAAGCAATTCCC+AGG	+	tig0000801:28905-28924	Msa1336140:intron	40.0%
	TTGTATGCAAATATGGGCCT+GGG	-	tig0000801:28925-28944	None:intergenic	40.0%
	ATTGTATGCAAATATGGGCC+TGG	-	tig0000801:28926-28945	None:intergenic	40.0%
!	AATCGAGTTGTTCATTTCCG+AGG	+	tig0000801:29066-29085	Msa1336140:CDS	40.0%
	TGTTCATTTCCGAGGTCATT+TGG	+	tig0000801:29074-29093	Msa1336140:intron	40.0%
!!	TAATAAGGGTGTCCTTGAAC+GGG	-	tig0000801:29136-29155	None:intergenic	40.0%
	ATGTGCCTTCATATTCAGGT+TGG	+	tig0000801:29248-29267	Msa1336140:intron	40.0%
	CGAAATTATCTTCGCATACC+TGG	-	tig0000801:29418-29437	None:intergenic	40.0%
	AACATAGCCACATAATCAGC+GGG	-	tig0000801:29535-29554	None:intergenic	40.0%
	GCTGATTATGTGGCTATGTT+TGG	+	tig0000801:29535-29554	Msa1336140:three_prime_UTR	40.0%
	GCAATTGACCAAGTTGTTCG+GGG	+	tig0000801:25979-25998	Msa1336140:five_prime_UTR	45.0%
!	GATTTTTGCTGATGGAGCTG+TGG	+	tig0000801:26135-26154	Msa1336140:exon	45.0%
	GTGCGTATATCTTAGGGGAA+AGG	+	tig0000801:26425-26444	Msa1336140:intron	45.0%
	TTTATTGCTCCTTCGGCTCT+AGG	-	tig0000801:26813-26832	None:intergenic	45.0%
	GATCACGCTCAACATGAATG+TGG	+	tig0000801:26867-26886	Msa1336140:intron	45.0%
	CAGACGAAAGGGTAATCTCA+TGG	-	tig0000801:27237-27256	None:intergenic	45.0%
	TGAGATTACCCTTTCGTCTG+AGG	+	tig0000801:27237-27256	Msa1336140:CDS	45.0%
	TTGCTCATCCTCAGACGAAA+GGG	-	tig0000801:27248-27267	None:intergenic	45.0%
!	CTTTTGTAGACCAGGGTGAT+AGG	-	tig0000801:27499-27518	None:intergenic	45.0%
	ATCACCCTGGTCTACAAAAG+AGG	+	tig0000801:27499-27518	Msa1336140:CDS	45.0%
	TTATGGCAGAGTGCACACAA+AGG	-	tig0000801:27971-27990	None:intergenic	45.0%
	AGGTGCATCAAACATGGGAA+TGG	-	tig0000801:28473-28492	None:intergenic	45.0%
	CGCCTTAGCTGTTCTTATAG+TGG	+	tig0000801:28985-29004	Msa1336140:intron	45.0%
	ACAGAGTCATTACCCGTTCA+AGG	+	tig0000801:29121-29140	Msa1336140:intron	45.0%
	CGTTCGTCATTCACAGTGAT+TGG	-	tig0000801:29202-29221	None:intergenic	45.0%
	TGTGAATGACGAACGATGTG+AGG	+	tig0000801:29207-29226	Msa1336140:CDS	45.0%
	TACCTGGTCATGAACAATGC+CGG	-	tig0000801:29402-29421	None:intergenic	45.0%
!	AGCGGGCTTGATTCTCATAA+AGG	-	tig0000801:29518-29537	None:intergenic	45.0%
!	AATCAAGCCCGCTGATTATG+TGG	+	tig0000801:29525-29544	Msa1336140:three_prime_UTR	45.0%
!!	ATAAAAAATTGAATAAATTT+GGG	-	tig0000801:25829-25848	None:intergenic	5.0%
!!	AATAAAAAATTGAATAAATT+TGG	-	tig0000801:25830-25849	None:intergenic	5.0%
!!!	TTTATTCAATTTTTTATTTT+TGG	+	tig0000801:25832-25851	Msa1336140:intron	5.0%
!!!	TTATTCAATTTTTTATTTTT+GGG	+	tig0000801:25833-25852	Msa1336140:intron	5.0%
	GAACAAGTGCAGTGCATGAG+AGG	+	tig0000801:25343-25362	Msa1336140:five_prime_UTR	50.0%
!	ACATCCAATCATGGTGGCGA+AGG	-	tig0000801:25404-25423	None:intergenic	50.0%
	TGCACCGCTTAACACTCCAT+TGG	+	tig0000801:25449-25468	Msa1336140:five_prime_UTR	50.0%
	TAGATGGTCATGCGAGTGTC+AGG	+	tig0000801:25954-25973	Msa1336140:intron	50.0%
	TACTTAGTGCCTAGAGCCGA+AGG	+	tig0000801:26801-26820	Msa1336140:intron	50.0%
	AGGGTAATCTCATGGCCCTT+TGG	-	tig0000801:27229-27248	None:intergenic	50.0%
	GTTGCTCATCCTCAGACGAA+AGG	-	tig0000801:27249-27268	None:intergenic	50.0%
	TACAAGTAGGCCTATCACCC+TGG	+	tig0000801:27486-27505	Msa1336140:CDS	50.0%
	TCATAGAAGGGGCTGATGGT+TGG	-	tig0000801:28778-28797	None:intergenic	50.0%
	GCATTCATAGAAGGGGCTGA+TGG	-	tig0000801:28782-28801	None:intergenic	50.0%
	TCACAAAAAGGAAGCGAGCG+TGG	-	tig0000801:29042-29061	None:intergenic	50.0%
!	TTCCGAGGTCATTTGGTTCC+TGG	+	tig0000801:29081-29100	Msa1336140:intron	50.0%
!	TCCGAGGTCATTTGGTTCCT+GGG	+	tig0000801:29082-29101	Msa1336140:intron	50.0%
	TCCCAGGAACCAAATGACCT+CGG	-	tig0000801:29086-29105	None:intergenic	50.0%
	ACCTGGTCATGAACAATGCC+GGG	-	tig0000801:29401-29420	None:intergenic	50.0%
	GGTTCCTTCGCCACCATGAT+TGG	+	tig0000801:25397-25416	Msa1336140:five_prime_UTR	55.0%
	GAGAGCTTCCCCGAACAACT+TGG	-	tig0000801:25990-26009	None:intergenic	55.0%
	GCTGATGGAGCTGTGGACTT+CGG	+	tig0000801:26142-26161	Msa1336140:exon	55.0%
!!	ATCTCGATTTGGCGGTTGCC+CGG	-	tig0000801:26923-26942	None:intergenic	55.0%
	CTCATGGCCCTTTGGCAGAA+AGG	-	tig0000801:27221-27240	None:intergenic	55.0%
	TCCCGGCATTGTTCATGACC+AGG	+	tig0000801:29397-29416	Msa1336140:CDS	55.0%
	GGGCAACCGCCAAATCGAGA+TGG	+	tig0000801:26922-26941	Msa1336140:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
tig0000801	gene	25293	29684	25293	ID=Msa1336140;Name=Msa1336140
tig0000801	mRNA	25293	29684	25293	ID=Msa1336140-mRNA-1;Parent=Msa1336140;Name=Msa1336140-mRNA-1;_AED=0.14;_eAED=0.14;_QI=410\|0.5\|0.45\|1\|0.8\|0.72\|11\|161\|324
tig0000801	exon	25293	25470	25293	ID=Msa1336140-mRNA-1:exon:592;Parent=Msa1336140-mRNA-1
tig0000801	exon	25761	25803	25761	ID=Msa1336140-mRNA-1:exon:593;Parent=Msa1336140-mRNA-1
tig0000801	exon	25957	26191	25957	ID=Msa1336140-mRNA-1:exon:594;Parent=Msa1336140-mRNA-1
tig0000801	exon	26905	27043	26905	ID=Msa1336140-mRNA-1:exon:595;Parent=Msa1336140-mRNA-1
tig0000801	exon	27141	27307	27141	ID=Msa1336140-mRNA-1:exon:596;Parent=Msa1336140-mRNA-1
tig0000801	exon	27429	27520	27429	ID=Msa1336140-mRNA-1:exon:597;Parent=Msa1336140-mRNA-1
tig0000801	exon	28528	28633	28528	ID=Msa1336140-mRNA-1:exon:598;Parent=Msa1336140-mRNA-1
tig0000801	exon	28719	28856	28719	ID=Msa1336140-mRNA-1:exon:599;Parent=Msa1336140-mRNA-1
tig0000801	exon	29031	29087	29031	ID=Msa1336140-mRNA-1:exon:600;Parent=Msa1336140-mRNA-1
tig0000801	exon	29185	29265	29185	ID=Msa1336140-mRNA-1:exon:601;Parent=Msa1336140-mRNA-1
tig0000801	exon	29375	29684	29375	ID=Msa1336140-mRNA-1:exon:602;Parent=Msa1336140-mRNA-1
tig0000801	five_prime_UTR	25293	25470	25293	ID=Msa1336140-mRNA-1:five_prime_utr;Parent=Msa1336140-mRNA-1
tig0000801	five_prime_UTR	25761	25803	25761	ID=Msa1336140-mRNA-1:five_prime_utr;Parent=Msa1336140-mRNA-1
tig0000801	five_prime_UTR	25957	26145	25957	ID=Msa1336140-mRNA-1:five_prime_utr;Parent=Msa1336140-mRNA-1
tig0000801	CDS	26146	26191	26146	ID=Msa1336140-mRNA-1:cds;Parent=Msa1336140-mRNA-1
tig0000801	CDS	26905	27043	26905	ID=Msa1336140-mRNA-1:cds;Parent=Msa1336140-mRNA-1
tig0000801	CDS	27141	27307	27141	ID=Msa1336140-mRNA-1:cds;Parent=Msa1336140-mRNA-1
tig0000801	CDS	27429	27520	27429	ID=Msa1336140-mRNA-1:cds;Parent=Msa1336140-mRNA-1
tig0000801	CDS	28528	28633	28528	ID=Msa1336140-mRNA-1:cds;Parent=Msa1336140-mRNA-1
tig0000801	CDS	28719	28856	28719	ID=Msa1336140-mRNA-1:cds;Parent=Msa1336140-mRNA-1
tig0000801	CDS	29031	29087	29031	ID=Msa1336140-mRNA-1:cds;Parent=Msa1336140-mRNA-1
tig0000801	CDS	29185	29265	29185	ID=Msa1336140-mRNA-1:cds;Parent=Msa1336140-mRNA-1
tig0000801	CDS	29375	29523	29375	ID=Msa1336140-mRNA-1:cds;Parent=Msa1336140-mRNA-1
tig0000801	three_prime_UTR	29524	29684	29524	ID=Msa1336140-mRNA-1:three_prime_utr;Parent=Msa1336140-mRNA-1

Gene Sequence

>Msa1336140

ATGGAGCTGTGGACTTCGGCTATTGAATGTGCCTTCTTATTTGAAGATCAAGTTTCAAGGTCCGGGCAACCGCCAAATCGAGATGGTCAAAAACTGACTACTAATGATGTCAAGGATATTTTTCAAGATAAGAAGGAAAAGTATGAGGACTTTTTGGAGGTTATGAAAGATTTTAAAGCACAAAGAGTTGATACTGATGGTGTCATTGAAAGAGTGAAGGAACTTTTTAGAGGTCATAGAGACTTGATCTTGGGATTTAACACCTTTCTGCCAAAGGGCCATGAGATTACCCTTTCGTCTGAGGATGAGCAACCTCAACTAAAAAAGAAGTTTGAATTTTATGAAGCTATGAACTCGGTTTCAGGGCAATGTTCATGTTTACAAGTCATTTCTGGACATATTGAATACGTACAAGTAGGCCTATCACCCTGGTCTACAAAAGAGAAGGCTCCAAAAAGGATTCGAACATCCGAAAATGATGATTGTAGTGAGCTTAGTTTGAACTTTTTGGAAGATGTTGAGAGAACTCCTTTGTCTCGCATTACTAATGTTTCTTCATCATCATCCCACACACCATATTCGGTAAGAAGAAGCTTCATCACTGCTCCAACCATCAGCCCCTTCTATGAATGCCAATCTTCCTCTTTGCAAGAGTTAGATAGGACACCTTTGTCTAATATTTCTAATGTTTCTTTGCCACGCTCGCTTCCTTTTTGTGAAAGAAATCGAGTTGTTCATTTCCGAGAGTCATTACAGATTCCAATCACTGTGAATGACGAACGATGTGAGGCTAATTTCGAACAAATTGATGTGCCTTCATATTCAGGGGGATATGATAATGTACATGCTCCCGGCATTGTTCATGACCAGGTATGCGAAGATAATTTCGAAGAATCTGATATACCATCAAATTCGGGAAGTTTATATTTGTTAGTTGCTGCCAGTTGTCTCAATATAGATCGTTTACCTTTATGA

Protein sequence

>Msa1336140

MELWTSAIECAFLFEDQVSRSGQPPNRDGQKLTTNDVKDIFQDKKEKYEDFLEVMKDFKAQRVDTDGVIERVKELFRGHRDLILGFNTFLPKGHEITLSSEDEQPQLKKKFEFYEAMNSVSGQCSCLQVISGHIEYVQVGLSPWSTKEKAPKRIRTSENDDCSELSLNFLEDVERTPLSRITNVSSSSSHTPYSVRRSFITAPTISPFYECQSSSLQELDRTPLSNISNVSLPRSLPFCERNRVVHFRESLQIPITVNDERCEANFEQIDVPSYSGGYDNVHAPGIVHDQVCEDNFEESDIPSNSGSLYLLVAASCLNIDRLPL*