AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1340450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1340450 MtrunA17_Chr3g0114841 97.250 509 8 4 1 504 1 508 0.0 1009
Msa1340450 MtrunA17_Chr5g0424131 62.451 506 157 12 12 504 23 508 0.0 582
Msa1340450 MtrunA17_Chr8g0383981 38.693 398 206 12 115 503 136 504 7.57e-68 226
Msa1340450 MtrunA17_Chr7g0224271 33.673 490 269 17 30 496 218 674 1.62e-64 221
Msa1340450 MtrunA17_Chr4g0038761 38.172 372 201 13 132 497 96 444 4.63e-52 183
Msa1340450 MtrunA17_Chr7g0245601 37.203 379 201 16 123 494 443 791 1.19e-51 187
Msa1340450 MtrunA17_Chr3g0110971 31.507 438 244 13 82 494 180 586 2.40e-51 184
Msa1340450 MtrunA17_Chr2g0306641 33.092 414 243 12 99 503 107 495 8.69e-50 178
Msa1340450 MtrunA17_Chr3g0125811 31.931 404 239 12 103 494 190 569 2.52e-48 175
Msa1340450 MtrunA17_Chr1g0183641 31.340 418 251 13 89 499 93 481 2.83e-48 173
Msa1340450 MtrunA17_Chr1g0159461 32.648 389 230 11 117 494 224 591 5.75e-48 174
Msa1340450 MtrunA17_Chr4g0057891 31.683 404 252 9 102 496 133 521 2.16e-47 172
Msa1340450 MtrunA17_Chr8g0357601 31.767 447 262 13 81 503 133 560 3.61e-46 169
Msa1340450 MtrunA17_Chr4g0039661 32.609 368 229 8 130 494 203 554 7.63e-45 165
Msa1340450 MtrunA17_Chr5g0447691 29.397 398 251 10 106 494 167 543 4.55e-43 160
Msa1340450 MtrunA17_Chr2g0319091 31.961 413 240 15 100 494 189 578 6.23e-43 160
Msa1340450 MtrunA17_Chr8g0376381 30.923 401 231 15 111 500 162 527 3.87e-41 155
Msa1340450 MtrunA17_Chr1g0200401 31.442 423 220 16 108 494 70 458 5.11e-40 150
Msa1340450 MtrunA17_Chr3g0101141 30.623 369 222 10 139 494 194 541 1.07e-39 150
Msa1340450 MtrunA17_Chr4g0057291 30.993 413 222 16 111 495 285 662 1.89e-39 152
Msa1340450 MtrunA17_Chr5g0445331 28.424 387 257 8 115 494 158 531 5.46e-39 149
Msa1340450 MtrunA17_Chr4g0076091 28.244 393 253 8 113 496 172 544 9.96e-38 145
Msa1340450 MtrunA17_Chr2g0290241 27.171 357 228 11 153 496 89 426 8.06e-36 138
Msa1340450 MtrunA17_Chr2g0294461 26.835 395 271 9 108 494 200 584 2.99e-35 139
Msa1340450 MtrunA17_Chr4g0031711 25.537 419 281 11 89 495 334 733 5.17e-33 133
Msa1340450 MtrunA17_Chr2g0294471 26.531 392 273 10 108 494 194 575 3.07e-32 130
Msa1340450 MtrunA17_Chr2g0328391 26.329 414 258 14 102 495 283 669 1.04e-31 129
Msa1340450 MtrunA17_Chr4g0031741 28.362 409 240 17 110 497 276 652 1.22e-31 129
Msa1340450 MtrunA17_Chr7g0238891 28.726 369 226 10 143 494 391 739 9.86e-31 126
Msa1340450 MtrunA17_Chr2g0328411 28.108 370 224 14 143 494 308 653 1.41e-29 122
Msa1340450 MtrunA17_Chr2g0329591 26.841 421 262 14 97 494 53 450 2.85e-29 120
Msa1340450 MtrunA17_Chr7g0230731 28.462 390 242 15 115 496 369 729 3.99e-29 121
Msa1340450 MtrunA17_Chr7g0230771 28.205 390 243 15 115 496 372 732 1.40e-28 120
Msa1340450 MtrunA17_Chr2g0328401 30.798 263 157 8 199 446 356 608 3.43e-28 118
Msa1340450 MtrunA17_Chr3g0085681 24.554 448 258 13 104 494 11 435 4.23e-28 116
Msa1340450 MtrunA17_Chr4g0031701 25.263 380 248 13 87 448 220 581 6.59e-28 117
Msa1340450 MtrunA17_Chr4g0031721 25.822 426 273 14 86 495 286 684 3.69e-27 115
Msa1340450 MtrunA17_Chr5g0401131 27.525 396 250 14 117 494 113 489 9.45e-27 113
Msa1340450 MtrunA17_Chr2g0328431 27.933 358 220 13 153 495 320 654 1.41e-25 110
Msa1340450 MtrunA17_Chr4g0031731 24.824 427 282 14 87 496 220 624 1.61e-25 110
Msa1340450 MtrunA17_Chr7g0270031 25.377 398 263 14 108 494 179 553 3.26e-25 108
Msa1340450 MtrunA17_Chr8g0373561 28.267 375 227 13 135 496 197 542 2.72e-23 103
Msa1340450 MtrunA17_Chr3g0085361 24.860 358 203 8 192 494 3 349 3.36e-23 100
Msa1340450 MtrunA17_Chr2g0328341 25.316 395 250 14 118 495 272 638 4.17e-23 103
Msa1340450 MtrunA17_Chr2g0328381 23.982 442 284 15 71 494 233 640 1.85e-22 100
Msa1340450 MtrunA17_Chr4g0012071 25.943 424 273 15 78 496 165 552 3.52e-22 99.8
Msa1340450 MtrunA17_Chr4g0038851 30.043 233 142 7 104 334 34 247 1.69e-21 97.4
Msa1340450 MtrunA17_Chr4g0038851 28.000 150 102 3 348 494 322 468 1.89e-12 69.3
Msa1340450 MtrunA17_Chr5g0396491 28.936 235 144 8 103 334 41 255 4.13e-21 96.3
Msa1340450 MtrunA17_Chr5g0396491 31.646 158 94 5 344 494 327 477 2.68e-13 72.0
Msa1340450 MtrunA17_Chr7g0243151 26.161 409 253 14 104 494 206 583 2.37e-20 94.4
Msa1340450 MtrunA17_Chr2g0328361 24.936 389 232 13 118 494 274 614 1.05e-19 92.4
Msa1340450 MtrunA17_Chr1g0194621 23.500 400 275 12 108 494 136 517 2.02e-19 91.3
Msa1340450 MtrunA17_Chr2g0328371 26.068 234 145 8 201 420 2 221 7.09e-19 86.3
Msa1340450 MtrunA17_Chr7g0236851 27.597 308 189 13 205 494 365 656 1.95e-14 75.9
Msa1340450 MtrunA17_Chr8g0344101 24.495 396 263 12 117 494 222 599 2.76e-14 75.5
Msa1340450 MtrunA17_Chr4g0053901 23.207 474 285 17 80 494 14 467 1.38e-13 72.8
Msa1340450 MtrunA17_Chr5g0401421 21.564 422 277 10 117 494 34 445 5.94e-13 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1340450 AT4G08250.1 51.200 500 206 13 11 499 10 482 4.41e-158 458
Msa1340450 AT3G54220.1 35.632 435 239 17 73 498 251 653 2.29e-52 188
Msa1340450 AT5G41920.1 35.013 397 231 12 101 494 27 399 1.06e-50 178
Msa1340450 AT1G66350.1 32.530 415 232 16 88 494 131 505 3.11e-47 171
Msa1340450 AT3G03450.1 31.514 403 233 14 106 494 171 544 4.34e-46 169
Msa1340450 AT5G66770.1 32.020 406 253 7 95 494 195 583 5.06e-46 169
Msa1340450 AT5G17490.1 32.688 413 236 14 97 498 138 519 1.28e-45 167
Msa1340450 AT3G50650.1 33.425 365 215 7 140 494 195 541 3.76e-44 164
Msa1340450 AT1G55580.1 34.505 313 188 7 195 494 136 444 9.18e-44 160
Msa1340450 AT5G48150.1 29.897 388 239 10 119 494 123 489 1.04e-42 159
Msa1340450 AT5G48150.4 29.897 388 239 10 119 494 123 489 1.04e-42 159
Msa1340450 AT5G48150.2 29.897 388 239 10 119 494 123 489 1.04e-42 159
Msa1340450 AT5G48150.3 29.897 388 239 10 119 494 123 489 1.04e-42 159
Msa1340450 AT2G01570.1 31.127 408 235 14 106 500 212 586 1.27e-41 157
Msa1340450 AT4G17230.1 31.608 367 213 10 143 494 181 524 1.06e-40 154
Msa1340450 AT4G17230.2 31.608 367 213 10 143 494 181 524 1.06e-40 154
Msa1340450 AT1G21450.1 31.202 391 234 14 117 494 224 592 3.09e-40 153
Msa1340450 AT1G14920.1 29.756 410 236 16 106 499 160 533 5.74e-39 149
Msa1340450 AT2G04890.1 31.156 398 230 14 110 494 46 412 7.24e-39 146
Msa1340450 AT1G50600.3 30.789 380 229 12 129 494 166 525 5.41e-38 146
Msa1340450 AT1G50600.2 30.789 380 229 12 129 494 241 600 1.23e-37 146
Msa1340450 AT1G50600.1 30.789 380 229 12 129 494 237 596 1.26e-37 146
Msa1340450 AT1G63100.1 29.730 407 248 13 108 495 242 629 9.07e-37 144
Msa1340450 AT1G63100.2 29.730 407 248 13 108 495 267 654 1.17e-36 144
Msa1340450 AT1G07530.1 27.938 451 280 14 65 499 348 769 6.63e-36 142
Msa1340450 AT2G29065.1 26.598 391 260 10 118 495 252 628 3.61e-32 130
Msa1340450 AT2G29060.1 25.586 469 291 16 51 495 258 692 6.24e-32 130
Msa1340450 AT2G29060.2 25.586 469 291 16 51 495 221 655 6.43e-32 130
Msa1340450 AT1G07520.3 27.222 360 234 9 153 497 350 696 4.55e-31 127
Msa1340450 AT1G07520.1 27.222 360 234 9 153 497 349 695 4.70e-31 127
Msa1340450 AT1G07520.2 27.222 360 234 9 153 497 185 531 5.03e-31 126
Msa1340450 AT1G07520.4 27.222 360 234 9 153 497 185 531 5.03e-31 126
Msa1340450 AT3G46600.2 27.889 398 237 12 117 494 3 370 9.93e-31 123
Msa1340450 AT3G46600.1 27.475 404 243 12 111 494 205 578 2.64e-30 125
Msa1340450 AT3G46600.3 27.111 450 261 14 82 494 127 546 5.35e-30 123
Msa1340450 AT4G37650.1 27.820 399 250 13 118 494 146 528 8.17e-30 123
Msa1340450 AT5G59450.1 25.221 452 291 13 68 494 168 597 8.29e-29 120
Msa1340450 AT3G60630.1 27.970 404 257 12 109 496 238 623 1.60e-28 119
Msa1340450 AT2G37650.1 28.250 400 252 13 113 500 342 718 6.10e-27 115
Msa1340450 AT2G37650.2 28.250 400 252 13 113 500 330 706 7.84e-27 115
Msa1340450 AT2G45160.1 27.251 411 246 14 107 496 262 640 4.73e-26 112
Msa1340450 AT4G36710.1 27.913 369 233 12 135 494 140 484 6.09e-26 111
Msa1340450 AT4G00150.1 27.436 390 234 13 119 499 209 558 5.62e-21 96.7
Msa1340450 AT1G50420.1 32.203 236 135 9 104 334 43 258 2.52e-20 94.4
Msa1340450 AT1G50420.1 34.641 153 94 3 347 496 331 480 1.22e-17 85.9
Msa1340450 AT3G49950.1 25.469 373 225 13 152 495 60 408 2.85e-19 90.5
Msa1340450 AT5G52510.1 28.793 323 188 10 201 494 330 639 7.49e-18 87.0

Find 189 sgRNAs with CRISPR-Local

Find 418 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTAGGTGAGTTAGGGTTTA+GGG 0.208196 tig0004148:+68715 Msa1340450:CDS
CCTACTTCCGACGATGATTA+TGG 0.250428 tig0004148:+67474 Msa1340450:CDS
GGAGAGTGGTTAGGTGAGTT+AGG 0.260105 tig0004148:+68707 Msa1340450:CDS
GTCAACTGGGACACCTTTAC+AGG 0.297676 tig0004148:+67525 Msa1340450:CDS
GCAGAACCGGGCCCGGGCTT+TGG 0.319278 tig0004148:+68598 Msa1340450:CDS
CATTTCACCGAAGCCCTTCA+TGG 0.325802 tig0004148:+67888 Msa1340450:CDS
TGTCAAGCAAAGCTGTTGTT+AGG 0.326046 tig0004148:+68764 Msa1340450:CDS
TGGGTTTGTGGAAAGGTTCA+TGG 0.326737 tig0004148:+68520 Msa1340450:CDS
TCCACCAACGTCACAAGCTT+TGG 0.330745 tig0004148:-68473 None:intergenic
ACTGGTCTCCCATCGTCAAC+TGG 0.335690 tig0004148:+67511 Msa1340450:CDS
GGTGGTGGTGGTTGTGGTGA+TGG 0.340117 tig0004148:-67625 None:intergenic
TGCTTCGATGATGGCCTGAT+TGG 0.347156 tig0004148:-68066 None:intergenic
GAGAGTGGTTAGGTGAGTTA+GGG 0.358228 tig0004148:+68708 Msa1340450:CDS
GTGGTGGTTGTGGTGATGGA+TGG 0.363760 tig0004148:-67621 None:intergenic
ATCAATGACCTCCACTTCTC+TGG 0.368955 tig0004148:+67429 Msa1340450:CDS
ACCTCCTTCGCCGCTTCCCT+TGG 0.370284 tig0004148:+68272 Msa1340450:CDS
CCTAGGATTGCAGGCTCGTT+GGG 0.371680 tig0004148:+68641 Msa1340450:CDS
GCATTATCGCGGACAGGAAC+TGG 0.375463 tig0004148:+68206 Msa1340450:CDS
GGTTAGGTGAGTTAGGGTTT+AGG 0.376292 tig0004148:+68714 Msa1340450:CDS
TTCCGATGCAGAACCGGGCC+CGG 0.381021 tig0004148:+68591 Msa1340450:CDS
TTCGGTAGTTGGTGGGTTTG+TGG 0.382194 tig0004148:+68508 Msa1340450:CDS
GCTTGTACGTGGAGAGGCTT+TGG 0.384610 tig0004148:+68361 Msa1340450:CDS
CTTCCGCGCCAGCCATCAAT+AGG 0.391873 tig0004148:-67755 None:intergenic
ATGAGGTGGTGAAAGTCATC+TGG 0.398824 tig0004148:-67552 None:intergenic
GCCTAGGATTGCAGGCTCGT+TGG 0.400453 tig0004148:+68640 Msa1340450:CDS
GAAGAAGTTGGTTCGGTAGT+TGG 0.401602 tig0004148:+68497 Msa1340450:CDS
TCCGATGCAGAACCGGGCCC+GGG 0.407928 tig0004148:+68592 Msa1340450:CDS
GTTAGGGTTTAGGGGAGTTC+CGG 0.408294 tig0004148:+68724 Msa1340450:CDS
TAGTTACCGTGCACCGGAAT+CGG 0.409078 tig0004148:+68415 Msa1340450:CDS
AAGCAGCAAGTGTGTCGTTT+TGG 0.410870 tig0004148:-67992 None:intergenic
GTGGGCCACTGCTTCGATGA+TGG 0.417026 tig0004148:-68075 None:intergenic
TTCTTCCTCATCCGTGGTTG+TGG 0.418502 tig0004148:-67646 None:intergenic
CGGCCACTTCACAGCCAATC+AGG 0.418556 tig0004148:+68052 Msa1340450:CDS
TGACATGGACGCGGCGTTCG+TGG 0.420981 tig0004148:-68094 None:intergenic
GGATGAGGAAGAAGAAGAAA+TGG 0.423517 tig0004148:+67656 Msa1340450:CDS
AAGAATGAAGCAACCGATTC+CGG 0.425966 tig0004148:-68428 None:intergenic
GTTTGCTTTCTGCTTCCCTT+TGG 0.430877 tig0004148:+68864 Msa1340450:CDS
CCCAACGAGCCTGCAATCCT+AGG 0.435603 tig0004148:-68641 None:intergenic
CATAATCATCGTCGGAAGTA+GGG 0.435805 tig0004148:-67473 None:intergenic
TCGCCTGCCGGTTTCTTGTA+CGG 0.437235 tig0004148:-68246 None:intergenic
CACCACCCGTTCTATATATC+CGG 0.439796 tig0004148:-68664 None:intergenic
GTAATAAGTTGGTGTTGGAT+TGG 0.441173 tig0004148:+68831 Msa1340450:CDS
GCCCTTCATGGACTACTAGA+AGG 0.443992 tig0004148:+67900 Msa1340450:CDS
GAAGTTGGTGATGATTCAAA+AGG 0.445291 tig0004148:+67717 Msa1340450:CDS
GGTTGTGGTGGTGGTGGTTG+TGG 0.449080 tig0004148:-67631 None:intergenic
TGGGTATAGGGTTGAAGAGG+TGG 0.451536 tig0004148:+68799 Msa1340450:CDS
AGAGAAGGTCGTGGGGAGAG+TGG 0.453369 tig0004148:+68693 Msa1340450:CDS
TGAGGTAATGTTTGTTGTTG+TGG 0.455641 tig0004148:-67947 None:intergenic
AAAACTAGTGCACCTATTGA+TGG 0.457233 tig0004148:+67743 Msa1340450:CDS
GATGGGAGACCAGTGGTTCC+AGG 0.457583 tig0004148:-67502 None:intergenic
ATGTCACCTTACGTCAAATT+CGG 0.460085 tig0004148:+68032 Msa1340450:CDS
AGAGAAGTGGAGGTCATTGA+TGG 0.464377 tig0004148:-67427 None:intergenic
CTCATCCGTGGTTGTGGTGG+TGG 0.464859 tig0004148:-67640 None:intergenic
AAACATTACCTCACCACAAA+TGG 0.466163 tig0004148:+67957 Msa1340450:CDS
TGAAGAGGAGAGAAGGTCGT+GGG 0.469399 tig0004148:+68685 Msa1340450:CDS
CCATAATCATCGTCGGAAGT+AGG 0.475182 tig0004148:-67474 None:intergenic
AAGATGAGGACCGTTGTTGT+TGG 0.475317 tig0004148:-68174 None:intergenic
AGGTCGTGGGGAGAGTGGTT+AGG 0.475697 tig0004148:+68698 Msa1340450:CDS
CATGGACTACTAGAAGGTGC+TGG 0.477897 tig0004148:+67906 Msa1340450:CDS
TCTCCACCAAAGCCCGGGCC+CGG 0.479183 tig0004148:-68604 None:intergenic
ACAACAACGGTCCTCATCTT+CGG 0.479785 tig0004148:+68177 Msa1340450:CDS
CGGAAGTAGGGGTGTTGGTG+AGG 0.483268 tig0004148:-67461 None:intergenic
GGCCCGGGCTTTGGTGGAGA+GGG 0.485841 tig0004148:+68607 Msa1340450:CDS
ATACCCTCTCCACCAAAGCC+CGG 0.489626 tig0004148:-68610 None:intergenic
GTCAAGCAAAGCTGTTGTTA+GGG 0.489648 tig0004148:+68765 Msa1340450:CDS
GCTGGCGCGGAAGCCTTAAC+CGG 0.490918 tig0004148:+67765 Msa1340450:CDS
ATCGCCACCGTACAAGAAAC+CGG 0.491760 tig0004148:+68239 Msa1340450:CDS
TAGGGTTGAAGAGGTGGGTG+TGG 0.493351 tig0004148:+68805 Msa1340450:CDS
TAGTAGTCCATGAAGGGCTT+CGG 0.495192 tig0004148:-67895 None:intergenic
ATGGTTGCACCTGGAACCAC+TGG 0.499209 tig0004148:+67493 Msa1340450:CDS
TAGTTGGTGGGTTTGTGGAA+AGG 0.499576 tig0004148:+68513 Msa1340450:CDS
ATTCCGGTGCACGGTAACTA+AGG 0.501357 tig0004148:-68412 None:intergenic
GTCATCTGGGGCACCTGTAA+AGG 0.502615 tig0004148:-67538 None:intergenic
TTGTCCAAGGGAAGCGGCGA+AGG 0.503279 tig0004148:-68276 None:intergenic
GACATGGACGCGGCGTTCGT+GGG 0.503853 tig0004148:-68093 None:intergenic
GTGACATGTCTTGAAGTAGT+TGG 0.504360 tig0004148:-68016 None:intergenic
GGAAGTAGGGGTGTTGGTGA+GGG 0.508441 tig0004148:-67460 None:intergenic
CATCATGGAAGGGGTCCAAT+GGG 0.510759 tig0004148:+68127 Msa1340450:CDS
CACCTTCTAGTAGTCCATGA+AGG 0.513198 tig0004148:-67902 None:intergenic
TTCTTCTTCTTCCTCATCCG+TGG 0.515776 tig0004148:-67652 None:intergenic
AGAAGAAGAACAAGTCCAAA+GGG 0.515921 tig0004148:-68879 None:intergenic
TGTTGTTGGAAGCTAGTGAT+TGG 0.517924 tig0004148:-68160 None:intergenic
GGATTGCAGGCTCGTTGGGC+CGG 0.518025 tig0004148:+68645 Msa1340450:CDS
GGGTATAGGGTTGAAGAGGT+GGG 0.519727 tig0004148:+68800 Msa1340450:CDS
GGGCCCGGGCTTTGGTGGAG+AGG 0.520373 tig0004148:+68606 Msa1340450:CDS
TGGTGTTGGATTGGAAATCA+AGG 0.521049 tig0004148:+68840 Msa1340450:CDS
ATGGACTACTAGAAGGTGCT+GGG 0.522101 tig0004148:+67907 Msa1340450:CDS
GTGAAGAGGAGAGAAGGTCG+TGG 0.522620 tig0004148:+68684 Msa1340450:CDS
AACCACCACCACCACAACCA+CGG 0.523345 tig0004148:+67635 Msa1340450:CDS
TTAGGTGAGTTAGGGTTTAG+GGG 0.524868 tig0004148:+68716 Msa1340450:CDS
TACCCTCTCCACCAAAGCCC+GGG 0.525259 tig0004148:-68609 None:intergenic
ATATAGAACGGGTGGTGAAG+AGG 0.526637 tig0004148:+68670 Msa1340450:CDS
CTGCAGTGGTGGAAAGAAAA+CGG 0.528193 tig0004148:-68299 None:intergenic
ACATCATGGAAGGGGTCCAA+TGG 0.528843 tig0004148:+68126 Msa1340450:CDS
CTAGTGCACCTATTGATGGC+TGG 0.529907 tig0004148:+67747 Msa1340450:CDS
GGGAGCTGTGTCCAGAGAAG+TGG 0.530921 tig0004148:-67440 None:intergenic
GTTGTCATGGGGACCATTTG+TGG 0.530976 tig0004148:-67970 None:intergenic
GGGTAGTAATAAGTTGGTGT+TGG 0.531656 tig0004148:+68826 Msa1340450:CDS
CAGTAATACCATGGACATGA+TGG 0.531857 tig0004148:+67395 None:intergenic
GTACGGTGGCGATTGACCTC+CGG 0.532598 tig0004148:-68229 None:intergenic
AAGTTGGTTCGGTAGTTGGT+GGG 0.534092 tig0004148:+68501 Msa1340450:CDS
GGTGGAAGAAGAAGTTGGTT+CGG 0.535127 tig0004148:+68490 Msa1340450:CDS
ATCCGTGGTTGTGGTGGTGG+TGG 0.537993 tig0004148:-67637 None:intergenic
GAAGTTGGTTCGGTAGTTGG+TGG 0.538694 tig0004148:+68500 Msa1340450:CDS
CTGGTCTCCCATCGTCAACT+GGG 0.539421 tig0004148:+67512 Msa1340450:CDS
CCTGCCGGTTTCTTGTACGG+TGG 0.541192 tig0004148:-68243 None:intergenic
ACATGCTAACGGCTCTAACA+TGG 0.542095 tig0004148:+67851 Msa1340450:CDS
CAATGATTTGCAAAGCTCAC+CGG 0.544682 tig0004148:-68743 None:intergenic
GCCCGGGCCCGGTTCTGCAT+CGG 0.547611 tig0004148:-68593 None:intergenic
GGGTGTGGGTAGTAATAAGT+TGG 0.548725 tig0004148:+68820 Msa1340450:CDS
GTGAGACTAATTCCTTGAGC+CGG 0.552046 tig0004148:-67827 None:intergenic
CGGGTGGTGAAGAGGAGAGA+AGG 0.553224 tig0004148:+68678 Msa1340450:CDS
TGTCATCGACTACGACATCA+TGG 0.554847 tig0004148:+68112 Msa1340450:CDS
TGAGGTGGTGAAAGTCATCT+GGG 0.555233 tig0004148:-67551 None:intergenic
TAGCTCGAGTGATATTGATC+CGG 0.555972 tig0004148:+67808 Msa1340450:CDS
AGGGTTGAAGAGGTGGGTGT+GGG 0.556341 tig0004148:+68806 Msa1340450:CDS
TCGGTTGCTTCATTCTTGAA+CGG 0.556699 tig0004148:+68434 Msa1340450:CDS
TTCCTCATCCGTGGTTGTGG+TGG 0.557874 tig0004148:-67643 None:intergenic
ATCGTCGGAAGTAGGGGTGT+TGG 0.558472 tig0004148:-67466 None:intergenic
ATCCATGTCCATCATGTCCA+TGG 0.558666 tig0004148:-67403 None:intergenic
GGAAAGAAAACGGTTGTCCA+AGG 0.560068 tig0004148:-68289 None:intergenic
GAAGAGGAGAGAAGGTCGTG+GGG 0.560976 tig0004148:+68686 Msa1340450:CDS
GGTAATGTTTGTTGTTGTGG+TGG 0.561567 tig0004148:-67944 None:intergenic
AGATGACTTTCACCACCTCA+TGG 0.561702 tig0004148:+67554 Msa1340450:CDS
CGATGGGTATAGGGTTGAAG+AGG 0.562357 tig0004148:+68796 Msa1340450:CDS
CACCACCACAACCACGGATG+AGG 0.566799 tig0004148:+67641 Msa1340450:CDS
CTGAGTCTAACCTGCAGTGG+TGG 0.569298 tig0004148:-68310 None:intergenic
TTGGGCCGGATATATAGAAC+GGG 0.569905 tig0004148:+68659 Msa1340450:CDS
ATTGGATTAATGAAGCCCAT+TGG 0.571351 tig0004148:-68142 None:intergenic
AAACGGTTGTCCAAGGGAAG+CGG 0.571859 tig0004148:-68282 None:intergenic
TCACCTTAGTTACCGTGCAC+CGG 0.573305 tig0004148:+68409 Msa1340450:CDS
ATCGACTACGACATCATGGA+AGG 0.578928 tig0004148:+68116 Msa1340450:CDS
CCACCGTACAAGAAACCGGC+AGG 0.581224 tig0004148:+68243 Msa1340450:CDS
TCCAAGGGAAGCGGCGAAGG+AGG 0.582127 tig0004148:-68273 None:intergenic
ACGATGATTATGGTTGCACC+TGG 0.582304 tig0004148:+67484 Msa1340450:CDS
AGTGATATTGATCCGGCTCA+AGG 0.583439 tig0004148:+67815 Msa1340450:CDS
AGCTGTGTCCAGAGAAGTGG+AGG 0.585513 tig0004148:-67437 None:intergenic
AAGGTGTCCCAGTTGACGAT+GGG 0.586507 tig0004148:-67519 None:intergenic
CATCTGAGTCTAACCTGCAG+TGG 0.589878 tig0004148:-68313 None:intergenic
TATCGCGGACAGGAACTGGC+CGG 0.591142 tig0004148:+68210 Msa1340450:CDS
AAGAAGAAGAACAAGTCCAA+AGG 0.591374 tig0004148:-68880 None:intergenic
AAGTTGGTGATGATTCAAAA+GGG 0.593257 tig0004148:+67718 Msa1340450:CDS
GAAGGAGGTTAATCGCCTGC+CGG 0.597149 tig0004148:-68258 None:intergenic
CGACTACGACATCATGGAAG+GGG 0.598773 tig0004148:+68118 Msa1340450:CDS
ACCTTCTAGTAGTCCATGAA+GGG 0.600557 tig0004148:-67901 None:intergenic
CTCACTTCATCATTATTCAG+CGG 0.602060 tig0004148:+68544 Msa1340450:CDS
TTCGGATAACCGCATTATCG+CGG 0.602078 tig0004148:+68195 Msa1340450:CDS
TCCAAAGCTTGTGACGTTGG+TGG 0.608726 tig0004148:+68472 Msa1340450:CDS
GCACCTATTGATGGCTGGCG+CGG 0.609141 tig0004148:+67752 Msa1340450:CDS
ATTAAAGCTTGTACGTGGAG+AGG 0.611742 tig0004148:+68355 Msa1340450:CDS
ATAATCATCGTCGGAAGTAG+GGG 0.612654 tig0004148:-67472 None:intergenic
TCAGGCCATCATCGAAGCAG+TGG 0.613643 tig0004148:+68070 Msa1340450:CDS
AGTTCCTGTCCGCGATAATG+CGG 0.622346 tig0004148:-68204 None:intergenic
AAGCAACCGATTCCGGTGCA+CGG 0.622561 tig0004148:-68421 None:intergenic
CGTACAAGCTTTAATGCAGA+AGG 0.623940 tig0004148:-68347 None:intergenic
TTAGTCTCACAACATGCTAA+CGG 0.625561 tig0004148:+67840 Msa1340450:CDS
AATGCGGTTATCCGAAGATG+AGG 0.633654 tig0004148:-68188 None:intergenic
AAAGGTGTCCCAGTTGACGA+TGG 0.634828 tig0004148:-67520 None:intergenic
CGCGGACAGGAACTGGCCGG+AGG 0.635150 tig0004148:+68213 Msa1340450:CDS
TGGATGGACTAAGCTGGTCG+AGG 0.635528 tig0004148:-67605 None:intergenic
GTTGGGCCGGATATATAGAA+CGG 0.635781 tig0004148:+68658 Msa1340450:CDS
AAGTGGCCGAATTTGACGTA+AGG 0.638521 tig0004148:-68038 None:intergenic
CGATGATTGTGTCCATGAGG+TGG 0.643118 tig0004148:-67566 None:intergenic
TCGACTACGACATCATGGAA+GGG 0.644449 tig0004148:+68117 Msa1340450:CDS
GAATCCAAAGCTTGTGACGT+TGG 0.644734 tig0004148:+68469 Msa1340450:CDS
TGATGTCGTAGTCGATGACA+TGG 0.647412 tig0004148:-68109 None:intergenic
ATATCACTCGAGCTAAGTCA+CGG 0.648503 tig0004148:-67800 None:intergenic
TGGCCTGATTGGCTGTGAAG+TGG 0.648617 tig0004148:-68055 None:intergenic
ACTAAGCTGGTCGAGGACAG+TGG 0.650840 tig0004148:-67598 None:intergenic
ATAACCGCATTATCGCGGAC+AGG 0.651185 tig0004148:+68200 Msa1340450:CDS
GAAAGAAAACGGTTGTCCAA+GGG 0.651213 tig0004148:-68288 None:intergenic
TGGACTACTAGAAGGTGCTG+GGG 0.652604 tig0004148:+67908 Msa1340450:CDS
CATGGGGACCATTTGTGGTG+AGG 0.653840 tig0004148:-67965 None:intergenic
AAGGGCTTCGGTGAAATGAG+CGG 0.654823 tig0004148:-67883 None:intergenic
TCTGCATTAAAGCTTGTACG+TGG 0.657776 tig0004148:+68350 Msa1340450:CDS
CGTAGTCGATGACATGGACG+CGG 0.658711 tig0004148:-68103 None:intergenic
TACCATGGACATGATGGACA+TGG 0.658713 tig0004148:+67401 None:intergenic
TGGTGATGGATGGACTAAGC+TGG 0.659130 tig0004148:-67611 None:intergenic
GGCCGGATATATAGAACGGG+TGG 0.661675 tig0004148:+68662 Msa1340450:CDS
GGTGCAACCATAATCATCGT+CGG 0.661939 tig0004148:-67481 None:intergenic
CAAGCTTTAATGCAGAAGGA+CGG 0.671677 tig0004148:-68343 None:intergenic
GGACTACTAGAAGGTGCTGG+GGG 0.674008 tig0004148:+67909 Msa1340450:CDS
AGTTGACGATGGGAGACCAG+TGG 0.695859 tig0004148:-67509 None:intergenic
ACGTTGGTGGAAGAAGAAGT+TGG 0.697366 tig0004148:+68485 Msa1340450:CDS
GGTGCACGGTAACTAAGGTG+AGG 0.709219 tig0004148:-68407 None:intergenic
TCACTAGCTTCCAACAACAA+CGG 0.720928 tig0004148:+68164 Msa1340450:CDS
GAGGTGGTGAAAGTCATCTG+GGG 0.725269 tig0004148:-67550 None:intergenic
CCTCGATGATTGTGTCCATG+AGG 0.737785 tig0004148:-67569 None:intergenic
CCTCATGGACACAATCATCG+AGG 0.768679 tig0004148:+67569 Msa1340450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
ACAGAAAAAACACAAGAAGT+TGG + tig0004148:67702-67721 Msa1340450:CDS 30.0%
!! AAGTTGGTGATGATTCAAAA+GGG + tig0004148:67718-67737 Msa1340450:CDS 30.0%
ACAGAAAAAACACAAGAAGT+TGG + tig0004148:67702-67721 Msa1340450:CDS 30.0%
!! AAGTTGGTGATGATTCAAAA+GGG + tig0004148:67718-67737 Msa1340450:CDS 30.0%
!! TTTTTCTGTCGTTGTTGTTG+TGG - tig0004148:67691-67710 None:intergenic 35.0%
!! GAAGTTGGTGATGATTCAAA+AGG + tig0004148:67717-67736 Msa1340450:CDS 35.0%
AAAACTAGTGCACCTATTGA+TGG + tig0004148:67743-67762 Msa1340450:CDS 35.0%
TTAGTCTCACAACATGCTAA+CGG + tig0004148:67840-67859 Msa1340450:CDS 35.0%
!! TGAGGTAATGTTTGTTGTTG+TGG - tig0004148:67950-67969 None:intergenic 35.0%
AAACATTACCTCACCACAAA+TGG + tig0004148:67957-67976 Msa1340450:CDS 35.0%
ATGTCACCTTACGTCAAATT+CGG + tig0004148:68032-68051 Msa1340450:CDS 35.0%
ATTGGATTAATGAAGCCCAT+TGG - tig0004148:68145-68164 None:intergenic 35.0%
CTCACTTCATCATTATTCAG+CGG + tig0004148:68544-68563 Msa1340450:CDS 35.0%
!! TTCAGCGGTTTTTGATTCAT+TGG + tig0004148:68559-68578 Msa1340450:CDS 35.0%
! TTGTTAGGGCTTTTTAACGA+TGG + tig0004148:68779-68798 Msa1340450:CDS 35.0%
! TGTTAGGGCTTTTTAACGAT+GGG + tig0004148:68780-68799 Msa1340450:CDS 35.0%
! GCTTTTTAACGATGGGTATA+GGG + tig0004148:68787-68806 Msa1340450:CDS 35.0%
!! GTAATAAGTTGGTGTTGGAT+TGG + tig0004148:68831-68850 Msa1340450:CDS 35.0%
AGAAGAAGAACAAGTCCAAA+GGG - tig0004148:68882-68901 None:intergenic 35.0%
AAGAAGAAGAACAAGTCCAA+AGG - tig0004148:68883-68902 None:intergenic 35.0%
!! TTTTTCTGTCGTTGTTGTTG+TGG - tig0004148:67691-67710 None:intergenic 35.0%
!! GAAGTTGGTGATGATTCAAA+AGG + tig0004148:67717-67736 Msa1340450:CDS 35.0%
AAAACTAGTGCACCTATTGA+TGG + tig0004148:67743-67762 Msa1340450:CDS 35.0%
TTAGTCTCACAACATGCTAA+CGG + tig0004148:67840-67859 Msa1340450:CDS 35.0%
!! TGAGGTAATGTTTGTTGTTG+TGG - tig0004148:67950-67969 None:intergenic 35.0%
AAACATTACCTCACCACAAA+TGG + tig0004148:67957-67976 Msa1340450:CDS 35.0%
ATGTCACCTTACGTCAAATT+CGG + tig0004148:68032-68051 Msa1340450:CDS 35.0%
ATTGGATTAATGAAGCCCAT+TGG - tig0004148:68145-68164 None:intergenic 35.0%
CTCACTTCATCATTATTCAG+CGG + tig0004148:68544-68563 Msa1340450:CDS 35.0%
!! TTCAGCGGTTTTTGATTCAT+TGG + tig0004148:68559-68578 Msa1340450:CDS 35.0%
! TTGTTAGGGCTTTTTAACGA+TGG + tig0004148:68779-68798 Msa1340450:CDS 35.0%
! TGTTAGGGCTTTTTAACGAT+GGG + tig0004148:68780-68799 Msa1340450:CDS 35.0%
! GCTTTTTAACGATGGGTATA+GGG + tig0004148:68787-68806 Msa1340450:CDS 35.0%
!! GTAATAAGTTGGTGTTGGAT+TGG + tig0004148:68831-68850 Msa1340450:CDS 35.0%
AGAAGAAGAACAAGTCCAAA+GGG - tig0004148:68882-68901 None:intergenic 35.0%
AAGAAGAAGAACAAGTCCAA+AGG - tig0004148:68883-68902 None:intergenic 35.0%
ATAATCATCGTCGGAAGTAG+GGG - tig0004148:67475-67494 None:intergenic 40.0%
CATAATCATCGTCGGAAGTA+GGG - tig0004148:67476-67495 None:intergenic 40.0%
GGATGAGGAAGAAGAAGAAA+TGG + tig0004148:67656-67675 Msa1340450:CDS 40.0%
!!! GTTTTTGGTTGAACCGGTTA+AGG - tig0004148:67781-67800 None:intergenic 40.0%
ATATCACTCGAGCTAAGTCA+CGG - tig0004148:67803-67822 None:intergenic 40.0%
TAGCTCGAGTGATATTGATC+CGG + tig0004148:67808-67827 Msa1340450:CDS 40.0%
ACCTTCTAGTAGTCCATGAA+GGG - tig0004148:67904-67923 None:intergenic 40.0%
!! GGTAATGTTTGTTGTTGTGG+TGG - tig0004148:67947-67966 None:intergenic 40.0%
!!! TGTGTCGTTTTGGTTGTCAT+GGG - tig0004148:67985-68004 None:intergenic 40.0%
GTGACATGTCTTGAAGTAGT+TGG - tig0004148:68019-68038 None:intergenic 40.0%
TGTTGTTGGAAGCTAGTGAT+TGG - tig0004148:68163-68182 None:intergenic 40.0%
! TCACTAGCTTCCAACAACAA+CGG + tig0004148:68164-68183 Msa1340450:CDS 40.0%
GAAAGAAAACGGTTGTCCAA+GGG - tig0004148:68291-68310 None:intergenic 40.0%
! CAAGCTTTAATGCAGAAGGA+CGG - tig0004148:68346-68365 None:intergenic 40.0%
! CGTACAAGCTTTAATGCAGA+AGG - tig0004148:68350-68369 None:intergenic 40.0%
TCTGCATTAAAGCTTGTACG+TGG + tig0004148:68350-68369 Msa1340450:CDS 40.0%
ATTAAAGCTTGTACGTGGAG+AGG + tig0004148:68355-68374 Msa1340450:CDS 40.0%
! AAGAATGAAGCAACCGATTC+CGG - tig0004148:68431-68450 None:intergenic 40.0%
TCGGTTGCTTCATTCTTGAA+CGG + tig0004148:68434-68453 Msa1340450:CDS 40.0%
!! AGCGGTTTTTGATTCATTGG+AGG + tig0004148:68562-68581 Msa1340450:CDS 40.0%
!! GTTTTTGATTCATTGGAGGC+TGG + tig0004148:68566-68585 Msa1340450:CDS 40.0%
!!! TTGGTGGAGAGGGTATTTTT+TGG + tig0004148:68617-68636 Msa1340450:CDS 40.0%
!!! TGGTGGAGAGGGTATTTTTT+GGG + tig0004148:68618-68637 Msa1340450:CDS 40.0%
GTTAGGTGAGTTAGGGTTTA+GGG + tig0004148:68715-68734 Msa1340450:CDS 40.0%
TTAGGTGAGTTAGGGTTTAG+GGG + tig0004148:68716-68735 Msa1340450:CDS 40.0%
! CAATGATTTGCAAAGCTCAC+CGG - tig0004148:68746-68765 None:intergenic 40.0%
TGTCAAGCAAAGCTGTTGTT+AGG + tig0004148:68764-68783 Msa1340450:CDS 40.0%
GTCAAGCAAAGCTGTTGTTA+GGG + tig0004148:68765-68784 Msa1340450:CDS 40.0%
! GGCTTTTTAACGATGGGTAT+AGG + tig0004148:68786-68805 Msa1340450:CDS 40.0%
!! GGGTAGTAATAAGTTGGTGT+TGG + tig0004148:68826-68845 Msa1340450:CDS 40.0%
! TGGTGTTGGATTGGAAATCA+AGG + tig0004148:68840-68859 Msa1340450:CDS 40.0%
ATAATCATCGTCGGAAGTAG+GGG - tig0004148:67475-67494 None:intergenic 40.0%
CATAATCATCGTCGGAAGTA+GGG - tig0004148:67476-67495 None:intergenic 40.0%
GGATGAGGAAGAAGAAGAAA+TGG + tig0004148:67656-67675 Msa1340450:CDS 40.0%
!!! GTTTTTGGTTGAACCGGTTA+AGG - tig0004148:67781-67800 None:intergenic 40.0%
ATATCACTCGAGCTAAGTCA+CGG - tig0004148:67803-67822 None:intergenic 40.0%
TAGCTCGAGTGATATTGATC+CGG + tig0004148:67808-67827 Msa1340450:CDS 40.0%
ACCTTCTAGTAGTCCATGAA+GGG - tig0004148:67904-67923 None:intergenic 40.0%
!! GGTAATGTTTGTTGTTGTGG+TGG - tig0004148:67947-67966 None:intergenic 40.0%
!!! TGTGTCGTTTTGGTTGTCAT+GGG - tig0004148:67985-68004 None:intergenic 40.0%
GTGACATGTCTTGAAGTAGT+TGG - tig0004148:68019-68038 None:intergenic 40.0%
TGTTGTTGGAAGCTAGTGAT+TGG - tig0004148:68163-68182 None:intergenic 40.0%
! TCACTAGCTTCCAACAACAA+CGG + tig0004148:68164-68183 Msa1340450:CDS 40.0%
GAAAGAAAACGGTTGTCCAA+GGG - tig0004148:68291-68310 None:intergenic 40.0%
! CAAGCTTTAATGCAGAAGGA+CGG - tig0004148:68346-68365 None:intergenic 40.0%
! CGTACAAGCTTTAATGCAGA+AGG - tig0004148:68350-68369 None:intergenic 40.0%
TCTGCATTAAAGCTTGTACG+TGG + tig0004148:68350-68369 Msa1340450:CDS 40.0%
ATTAAAGCTTGTACGTGGAG+AGG + tig0004148:68355-68374 Msa1340450:CDS 40.0%
! AAGAATGAAGCAACCGATTC+CGG - tig0004148:68431-68450 None:intergenic 40.0%
TCGGTTGCTTCATTCTTGAA+CGG + tig0004148:68434-68453 Msa1340450:CDS 40.0%
!! AGCGGTTTTTGATTCATTGG+AGG + tig0004148:68562-68581 Msa1340450:CDS 40.0%
!! GTTTTTGATTCATTGGAGGC+TGG + tig0004148:68566-68585 Msa1340450:CDS 40.0%
!!! TTGGTGGAGAGGGTATTTTT+TGG + tig0004148:68617-68636 Msa1340450:CDS 40.0%
!!! TGGTGGAGAGGGTATTTTTT+GGG + tig0004148:68618-68637 Msa1340450:CDS 40.0%
GTTAGGTGAGTTAGGGTTTA+GGG + tig0004148:68715-68734 Msa1340450:CDS 40.0%
TTAGGTGAGTTAGGGTTTAG+GGG + tig0004148:68716-68735 Msa1340450:CDS 40.0%
! CAATGATTTGCAAAGCTCAC+CGG - tig0004148:68746-68765 None:intergenic 40.0%
TGTCAAGCAAAGCTGTTGTT+AGG + tig0004148:68764-68783 Msa1340450:CDS 40.0%
GTCAAGCAAAGCTGTTGTTA+GGG + tig0004148:68765-68784 Msa1340450:CDS 40.0%
! GGCTTTTTAACGATGGGTAT+AGG + tig0004148:68786-68805 Msa1340450:CDS 40.0%
!! GGGTAGTAATAAGTTGGTGT+TGG + tig0004148:68826-68845 Msa1340450:CDS 40.0%
! TGGTGTTGGATTGGAAATCA+AGG + tig0004148:68840-68859 Msa1340450:CDS 40.0%
AGAGAAGTGGAGGTCATTGA+TGG - tig0004148:67430-67449 None:intergenic 45.0%
ATCAATGACCTCCACTTCTC+TGG + tig0004148:67429-67448 Msa1340450:CDS 45.0%
CCATAATCATCGTCGGAAGT+AGG - tig0004148:67477-67496 None:intergenic 45.0%
CCTACTTCCGACGATGATTA+TGG + tig0004148:67474-67493 Msa1340450:CDS 45.0%
GGTGCAACCATAATCATCGT+CGG - tig0004148:67484-67503 None:intergenic 45.0%
ACGATGATTATGGTTGCACC+TGG + tig0004148:67484-67503 Msa1340450:CDS 45.0%
TGAGGTGGTGAAAGTCATCT+GGG - tig0004148:67554-67573 None:intergenic 45.0%
ATGAGGTGGTGAAAGTCATC+TGG - tig0004148:67555-67574 None:intergenic 45.0%
AGATGACTTTCACCACCTCA+TGG + tig0004148:67554-67573 Msa1340450:CDS 45.0%
TTCTTCTTCTTCCTCATCCG+TGG - tig0004148:67655-67674 None:intergenic 45.0%
!!! GTCACGGTTTTTGGTTGAAC+CGG - tig0004148:67787-67806 None:intergenic 45.0%
! TCGAGCTAAGTCACGGTTTT+TGG - tig0004148:67796-67815 None:intergenic 45.0%
AGTGATATTGATCCGGCTCA+AGG + tig0004148:67815-67834 Msa1340450:CDS 45.0%
GTGAGACTAATTCCTTGAGC+CGG - tig0004148:67830-67849 None:intergenic 45.0%
! ACATGCTAACGGCTCTAACA+TGG + tig0004148:67851-67870 Msa1340450:CDS 45.0%
TAGTAGTCCATGAAGGGCTT+CGG - tig0004148:67898-67917 None:intergenic 45.0%
CACCTTCTAGTAGTCCATGA+AGG - tig0004148:67905-67924 None:intergenic 45.0%
!! ATGGACTACTAGAAGGTGCT+GGG + tig0004148:67907-67926 Msa1340450:CDS 45.0%
!!! GTGTCGTTTTGGTTGTCATG+GGG - tig0004148:67984-68003 None:intergenic 45.0%
!!! GTGTGTCGTTTTGGTTGTCA+TGG - tig0004148:67986-68005 None:intergenic 45.0%
!!! AAGCAGCAAGTGTGTCGTTT+TGG - tig0004148:67995-68014 None:intergenic 45.0%
AAGTGGCCGAATTTGACGTA+AGG - tig0004148:68041-68060 None:intergenic 45.0%
TGATGTCGTAGTCGATGACA+TGG - tig0004148:68112-68131 None:intergenic 45.0%
! TGTCATCGACTACGACATCA+TGG + tig0004148:68112-68131 Msa1340450:CDS 45.0%
ATCGACTACGACATCATGGA+AGG + tig0004148:68116-68135 Msa1340450:CDS 45.0%
TCGACTACGACATCATGGAA+GGG + tig0004148:68117-68136 Msa1340450:CDS 45.0%
AAGATGAGGACCGTTGTTGT+TGG - tig0004148:68177-68196 None:intergenic 45.0%
ACAACAACGGTCCTCATCTT+CGG + tig0004148:68177-68196 Msa1340450:CDS 45.0%
AATGCGGTTATCCGAAGATG+AGG - tig0004148:68191-68210 None:intergenic 45.0%
TTCGGATAACCGCATTATCG+CGG + tig0004148:68195-68214 Msa1340450:CDS 45.0%
GGAAAGAAAACGGTTGTCCA+AGG - tig0004148:68292-68311 None:intergenic 45.0%
! CTGCAGTGGTGGAAAGAAAA+CGG - tig0004148:68302-68321 None:intergenic 45.0%
GAATCCAAAGCTTGTGACGT+TGG + tig0004148:68469-68488 Msa1340450:CDS 45.0%
! ACGTTGGTGGAAGAAGAAGT+TGG + tig0004148:68485-68504 Msa1340450:CDS 45.0%
! GGTGGAAGAAGAAGTTGGTT+CGG + tig0004148:68490-68509 Msa1340450:CDS 45.0%
!! GAAGAAGTTGGTTCGGTAGT+TGG + tig0004148:68497-68516 Msa1340450:CDS 45.0%
!! AAGTTGGTTCGGTAGTTGGT+GGG + tig0004148:68501-68520 Msa1340450:CDS 45.0%
!! TAGTTGGTGGGTTTGTGGAA+AGG + tig0004148:68513-68532 Msa1340450:CDS 45.0%
TGGGTTTGTGGAAAGGTTCA+TGG + tig0004148:68520-68539 Msa1340450:CDS 45.0%
!!! AGAGGGTATTTTTTGGGCCT+AGG + tig0004148:68624-68643 Msa1340450:CDS 45.0%
!!! TTTTTTGGGCCTAGGATTGC+AGG + tig0004148:68632-68651 Msa1340450:CDS 45.0%
GTTGGGCCGGATATATAGAA+CGG + tig0004148:68658-68677 Msa1340450:CDS 45.0%
TTGGGCCGGATATATAGAAC+GGG + tig0004148:68659-68678 Msa1340450:CDS 45.0%
CACCACCCGTTCTATATATC+CGG - tig0004148:68667-68686 None:intergenic 45.0%
ATATAGAACGGGTGGTGAAG+AGG + tig0004148:68670-68689 Msa1340450:CDS 45.0%
GAGAGTGGTTAGGTGAGTTA+GGG + tig0004148:68708-68727 Msa1340450:CDS 45.0%
GGTTAGGTGAGTTAGGGTTT+AGG + tig0004148:68714-68733 Msa1340450:CDS 45.0%
GGGTGTGGGTAGTAATAAGT+TGG + tig0004148:68820-68839 Msa1340450:CDS 45.0%
GTTTGCTTTCTGCTTCCCTT+TGG + tig0004148:68864-68883 Msa1340450:CDS 45.0%
AGAGAAGTGGAGGTCATTGA+TGG - tig0004148:67430-67449 None:intergenic 45.0%
ATCAATGACCTCCACTTCTC+TGG + tig0004148:67429-67448 Msa1340450:CDS 45.0%
CCATAATCATCGTCGGAAGT+AGG - tig0004148:67477-67496 None:intergenic 45.0%
CCTACTTCCGACGATGATTA+TGG + tig0004148:67474-67493 Msa1340450:CDS 45.0%
GGTGCAACCATAATCATCGT+CGG - tig0004148:67484-67503 None:intergenic 45.0%
ACGATGATTATGGTTGCACC+TGG + tig0004148:67484-67503 Msa1340450:CDS 45.0%
TGAGGTGGTGAAAGTCATCT+GGG - tig0004148:67554-67573 None:intergenic 45.0%
ATGAGGTGGTGAAAGTCATC+TGG - tig0004148:67555-67574 None:intergenic 45.0%
AGATGACTTTCACCACCTCA+TGG + tig0004148:67554-67573 Msa1340450:CDS 45.0%
TTCTTCTTCTTCCTCATCCG+TGG - tig0004148:67655-67674 None:intergenic 45.0%
!!! GTCACGGTTTTTGGTTGAAC+CGG - tig0004148:67787-67806 None:intergenic 45.0%
! TCGAGCTAAGTCACGGTTTT+TGG - tig0004148:67796-67815 None:intergenic 45.0%
AGTGATATTGATCCGGCTCA+AGG + tig0004148:67815-67834 Msa1340450:CDS 45.0%
GTGAGACTAATTCCTTGAGC+CGG - tig0004148:67830-67849 None:intergenic 45.0%
! ACATGCTAACGGCTCTAACA+TGG + tig0004148:67851-67870 Msa1340450:CDS 45.0%
TAGTAGTCCATGAAGGGCTT+CGG - tig0004148:67898-67917 None:intergenic 45.0%
CACCTTCTAGTAGTCCATGA+AGG - tig0004148:67905-67924 None:intergenic 45.0%
!! ATGGACTACTAGAAGGTGCT+GGG + tig0004148:67907-67926 Msa1340450:CDS 45.0%
!!! GTGTCGTTTTGGTTGTCATG+GGG - tig0004148:67984-68003 None:intergenic 45.0%
!!! GTGTGTCGTTTTGGTTGTCA+TGG - tig0004148:67986-68005 None:intergenic 45.0%
!!! AAGCAGCAAGTGTGTCGTTT+TGG - tig0004148:67995-68014 None:intergenic 45.0%
AAGTGGCCGAATTTGACGTA+AGG - tig0004148:68041-68060 None:intergenic 45.0%
TGATGTCGTAGTCGATGACA+TGG - tig0004148:68112-68131 None:intergenic 45.0%
! TGTCATCGACTACGACATCA+TGG + tig0004148:68112-68131 Msa1340450:CDS 45.0%
ATCGACTACGACATCATGGA+AGG + tig0004148:68116-68135 Msa1340450:CDS 45.0%
TCGACTACGACATCATGGAA+GGG + tig0004148:68117-68136 Msa1340450:CDS 45.0%
AAGATGAGGACCGTTGTTGT+TGG - tig0004148:68177-68196 None:intergenic 45.0%
ACAACAACGGTCCTCATCTT+CGG + tig0004148:68177-68196 Msa1340450:CDS 45.0%
AATGCGGTTATCCGAAGATG+AGG - tig0004148:68191-68210 None:intergenic 45.0%
TTCGGATAACCGCATTATCG+CGG + tig0004148:68195-68214 Msa1340450:CDS 45.0%
GGAAAGAAAACGGTTGTCCA+AGG - tig0004148:68292-68311 None:intergenic 45.0%
! CTGCAGTGGTGGAAAGAAAA+CGG - tig0004148:68302-68321 None:intergenic 45.0%
GAATCCAAAGCTTGTGACGT+TGG + tig0004148:68469-68488 Msa1340450:CDS 45.0%
! ACGTTGGTGGAAGAAGAAGT+TGG + tig0004148:68485-68504 Msa1340450:CDS 45.0%
! GGTGGAAGAAGAAGTTGGTT+CGG + tig0004148:68490-68509 Msa1340450:CDS 45.0%
!! GAAGAAGTTGGTTCGGTAGT+TGG + tig0004148:68497-68516 Msa1340450:CDS 45.0%
!! AAGTTGGTTCGGTAGTTGGT+GGG + tig0004148:68501-68520 Msa1340450:CDS 45.0%
!! TAGTTGGTGGGTTTGTGGAA+AGG + tig0004148:68513-68532 Msa1340450:CDS 45.0%
TGGGTTTGTGGAAAGGTTCA+TGG + tig0004148:68520-68539 Msa1340450:CDS 45.0%
!!! AGAGGGTATTTTTTGGGCCT+AGG + tig0004148:68624-68643 Msa1340450:CDS 45.0%
!!! TTTTTTGGGCCTAGGATTGC+AGG + tig0004148:68632-68651 Msa1340450:CDS 45.0%
GTTGGGCCGGATATATAGAA+CGG + tig0004148:68658-68677 Msa1340450:CDS 45.0%
TTGGGCCGGATATATAGAAC+GGG + tig0004148:68659-68678 Msa1340450:CDS 45.0%
CACCACCCGTTCTATATATC+CGG - tig0004148:68667-68686 None:intergenic 45.0%
ATATAGAACGGGTGGTGAAG+AGG + tig0004148:68670-68689 Msa1340450:CDS 45.0%
GAGAGTGGTTAGGTGAGTTA+GGG + tig0004148:68708-68727 Msa1340450:CDS 45.0%
GGTTAGGTGAGTTAGGGTTT+AGG + tig0004148:68714-68733 Msa1340450:CDS 45.0%
GGGTGTGGGTAGTAATAAGT+TGG + tig0004148:68820-68839 Msa1340450:CDS 45.0%
GTTTGCTTTCTGCTTCCCTT+TGG + tig0004148:68864-68883 Msa1340450:CDS 45.0%
! AAGGTGTCCCAGTTGACGAT+GGG - tig0004148:67522-67541 None:intergenic 50.0%
!! AAAGGTGTCCCAGTTGACGA+TGG - tig0004148:67523-67542 None:intergenic 50.0%
GTCAACTGGGACACCTTTAC+AGG + tig0004148:67525-67544 Msa1340450:CDS 50.0%
GAGGTGGTGAAAGTCATCTG+GGG - tig0004148:67553-67572 None:intergenic 50.0%
CGATGATTGTGTCCATGAGG+TGG - tig0004148:67569-67588 None:intergenic 50.0%
CCTCGATGATTGTGTCCATG+AGG - tig0004148:67572-67591 None:intergenic 50.0%
CCTCATGGACACAATCATCG+AGG + tig0004148:67569-67588 Msa1340450:CDS 50.0%
!! TGGTGATGGATGGACTAAGC+TGG - tig0004148:67614-67633 None:intergenic 50.0%
TTCTTCCTCATCCGTGGTTG+TGG - tig0004148:67649-67668 None:intergenic 50.0%
! CTAGTGCACCTATTGATGGC+TGG + tig0004148:67747-67766 Msa1340450:CDS 50.0%
AAGGGCTTCGGTGAAATGAG+CGG - tig0004148:67886-67905 None:intergenic 50.0%
CATTTCACCGAAGCCCTTCA+TGG + tig0004148:67888-67907 Msa1340450:CDS 50.0%
! GCCCTTCATGGACTACTAGA+AGG + tig0004148:67900-67919 Msa1340450:CDS 50.0%
! CATGGACTACTAGAAGGTGC+TGG + tig0004148:67906-67925 Msa1340450:CDS 50.0%
!! TGGACTACTAGAAGGTGCTG+GGG + tig0004148:67908-67927 Msa1340450:CDS 50.0%
GTTGTCATGGGGACCATTTG+TGG - tig0004148:67973-67992 None:intergenic 50.0%
! TGCTTCGATGATGGCCTGAT+TGG - tig0004148:68069-68088 None:intergenic 50.0%
CGACTACGACATCATGGAAG+GGG + tig0004148:68118-68137 Msa1340450:CDS 50.0%
ACATCATGGAAGGGGTCCAA+TGG + tig0004148:68126-68145 Msa1340450:CDS 50.0%
CATCATGGAAGGGGTCCAAT+GGG + tig0004148:68127-68146 Msa1340450:CDS 50.0%
ATAACCGCATTATCGCGGAC+AGG + tig0004148:68200-68219 Msa1340450:CDS 50.0%
AGTTCCTGTCCGCGATAATG+CGG - tig0004148:68207-68226 None:intergenic 50.0%
ATCGCCACCGTACAAGAAAC+CGG + tig0004148:68239-68258 Msa1340450:CDS 50.0%
AAACGGTTGTCCAAGGGAAG+CGG - tig0004148:68285-68304 None:intergenic 50.0%
! CGTTTTCTTTCCACCACTGC+AGG + tig0004148:68300-68319 Msa1340450:CDS 50.0%
CATCTGAGTCTAACCTGCAG+TGG - tig0004148:68316-68335 None:intergenic 50.0%
TCACCTTAGTTACCGTGCAC+CGG + tig0004148:68409-68428 Msa1340450:CDS 50.0%
ATTCCGGTGCACGGTAACTA+AGG - tig0004148:68415-68434 None:intergenic 50.0%
TAGTTACCGTGCACCGGAAT+CGG + tig0004148:68415-68434 Msa1340450:CDS 50.0%
TCCAAAGCTTGTGACGTTGG+TGG + tig0004148:68472-68491 Msa1340450:CDS 50.0%
TCCACCAACGTCACAAGCTT+TGG - tig0004148:68476-68495 None:intergenic 50.0%
!! GAAGTTGGTTCGGTAGTTGG+TGG + tig0004148:68500-68519 Msa1340450:CDS 50.0%
!! TTCGGTAGTTGGTGGGTTTG+TGG + tig0004148:68508-68527 Msa1340450:CDS 50.0%
!! CTGGTTTTCCGATGCAGAAC+CGG + tig0004148:68585-68604 Msa1340450:CDS 50.0%
! TGGTTTTCCGATGCAGAACC+GGG + tig0004148:68586-68605 Msa1340450:CDS 50.0%
TGAAGAGGAGAGAAGGTCGT+GGG + tig0004148:68685-68704 Msa1340450:CDS 50.0%
GGAGAGTGGTTAGGTGAGTT+AGG + tig0004148:68707-68726 Msa1340450:CDS 50.0%
GTTAGGGTTTAGGGGAGTTC+CGG + tig0004148:68724-68743 Msa1340450:CDS 50.0%
CGATGGGTATAGGGTTGAAG+AGG + tig0004148:68796-68815 Msa1340450:CDS 50.0%
TGGGTATAGGGTTGAAGAGG+TGG + tig0004148:68799-68818 Msa1340450:CDS 50.0%
GGGTATAGGGTTGAAGAGGT+GGG + tig0004148:68800-68819 Msa1340450:CDS 50.0%
! AAGGTGTCCCAGTTGACGAT+GGG - tig0004148:67522-67541 None:intergenic 50.0%
!! AAAGGTGTCCCAGTTGACGA+TGG - tig0004148:67523-67542 None:intergenic 50.0%
GTCAACTGGGACACCTTTAC+AGG + tig0004148:67525-67544 Msa1340450:CDS 50.0%
GAGGTGGTGAAAGTCATCTG+GGG - tig0004148:67553-67572 None:intergenic 50.0%
CGATGATTGTGTCCATGAGG+TGG - tig0004148:67569-67588 None:intergenic 50.0%
CCTCGATGATTGTGTCCATG+AGG - tig0004148:67572-67591 None:intergenic 50.0%
CCTCATGGACACAATCATCG+AGG + tig0004148:67569-67588 Msa1340450:CDS 50.0%
!! TGGTGATGGATGGACTAAGC+TGG - tig0004148:67614-67633 None:intergenic 50.0%
TTCTTCCTCATCCGTGGTTG+TGG - tig0004148:67649-67668 None:intergenic 50.0%
! CTAGTGCACCTATTGATGGC+TGG + tig0004148:67747-67766 Msa1340450:CDS 50.0%
AAGGGCTTCGGTGAAATGAG+CGG - tig0004148:67886-67905 None:intergenic 50.0%
CATTTCACCGAAGCCCTTCA+TGG + tig0004148:67888-67907 Msa1340450:CDS 50.0%
! GCCCTTCATGGACTACTAGA+AGG + tig0004148:67900-67919 Msa1340450:CDS 50.0%
! CATGGACTACTAGAAGGTGC+TGG + tig0004148:67906-67925 Msa1340450:CDS 50.0%
!! TGGACTACTAGAAGGTGCTG+GGG + tig0004148:67908-67927 Msa1340450:CDS 50.0%
GTTGTCATGGGGACCATTTG+TGG - tig0004148:67973-67992 None:intergenic 50.0%
! TGCTTCGATGATGGCCTGAT+TGG - tig0004148:68069-68088 None:intergenic 50.0%
CGACTACGACATCATGGAAG+GGG + tig0004148:68118-68137 Msa1340450:CDS 50.0%
ACATCATGGAAGGGGTCCAA+TGG + tig0004148:68126-68145 Msa1340450:CDS 50.0%
CATCATGGAAGGGGTCCAAT+GGG + tig0004148:68127-68146 Msa1340450:CDS 50.0%
ATAACCGCATTATCGCGGAC+AGG + tig0004148:68200-68219 Msa1340450:CDS 50.0%
AGTTCCTGTCCGCGATAATG+CGG - tig0004148:68207-68226 None:intergenic 50.0%
ATCGCCACCGTACAAGAAAC+CGG + tig0004148:68239-68258 Msa1340450:CDS 50.0%
AAACGGTTGTCCAAGGGAAG+CGG - tig0004148:68285-68304 None:intergenic 50.0%
! CGTTTTCTTTCCACCACTGC+AGG + tig0004148:68300-68319 Msa1340450:CDS 50.0%
CATCTGAGTCTAACCTGCAG+TGG - tig0004148:68316-68335 None:intergenic 50.0%
TCACCTTAGTTACCGTGCAC+CGG + tig0004148:68409-68428 Msa1340450:CDS 50.0%
ATTCCGGTGCACGGTAACTA+AGG - tig0004148:68415-68434 None:intergenic 50.0%
TAGTTACCGTGCACCGGAAT+CGG + tig0004148:68415-68434 Msa1340450:CDS 50.0%
TCCAAAGCTTGTGACGTTGG+TGG + tig0004148:68472-68491 Msa1340450:CDS 50.0%
TCCACCAACGTCACAAGCTT+TGG - tig0004148:68476-68495 None:intergenic 50.0%
!! GAAGTTGGTTCGGTAGTTGG+TGG + tig0004148:68500-68519 Msa1340450:CDS 50.0%
!! TTCGGTAGTTGGTGGGTTTG+TGG + tig0004148:68508-68527 Msa1340450:CDS 50.0%
!! CTGGTTTTCCGATGCAGAAC+CGG + tig0004148:68585-68604 Msa1340450:CDS 50.0%
! TGGTTTTCCGATGCAGAACC+GGG + tig0004148:68586-68605 Msa1340450:CDS 50.0%
TGAAGAGGAGAGAAGGTCGT+GGG + tig0004148:68685-68704 Msa1340450:CDS 50.0%
GGAGAGTGGTTAGGTGAGTT+AGG + tig0004148:68707-68726 Msa1340450:CDS 50.0%
GTTAGGGTTTAGGGGAGTTC+CGG + tig0004148:68724-68743 Msa1340450:CDS 50.0%
CGATGGGTATAGGGTTGAAG+AGG + tig0004148:68796-68815 Msa1340450:CDS 50.0%
TGGGTATAGGGTTGAAGAGG+TGG + tig0004148:68799-68818 Msa1340450:CDS 50.0%
GGGTATAGGGTTGAAGAGGT+GGG + tig0004148:68800-68819 Msa1340450:CDS 50.0%
AGCTGTGTCCAGAGAAGTGG+AGG - tig0004148:67440-67459 None:intergenic 55.0%
!! GGAAGTAGGGGTGTTGGTGA+GGG - tig0004148:67463-67482 None:intergenic 55.0%
! ATCGTCGGAAGTAGGGGTGT+TGG - tig0004148:67469-67488 None:intergenic 55.0%
ATGGTTGCACCTGGAACCAC+TGG + tig0004148:67493-67512 Msa1340450:CDS 55.0%
AGTTGACGATGGGAGACCAG+TGG - tig0004148:67512-67531 None:intergenic 55.0%
! ACTGGTCTCCCATCGTCAAC+TGG + tig0004148:67511-67530 Msa1340450:CDS 55.0%
CTGGTCTCCCATCGTCAACT+GGG + tig0004148:67512-67531 Msa1340450:CDS 55.0%
! GTCATCTGGGGCACCTGTAA+AGG - tig0004148:67541-67560 None:intergenic 55.0%
ACTAAGCTGGTCGAGGACAG+TGG - tig0004148:67601-67620 None:intergenic 55.0%
!! TGGATGGACTAAGCTGGTCG+AGG - tig0004148:67608-67627 None:intergenic 55.0%
!! GTGGTGGTTGTGGTGATGGA+TGG - tig0004148:67624-67643 None:intergenic 55.0%
AACCACCACCACCACAACCA+CGG + tig0004148:67635-67654 Msa1340450:CDS 55.0%
TTCCTCATCCGTGGTTGTGG+TGG - tig0004148:67646-67665 None:intergenic 55.0%
!! GGACTACTAGAAGGTGCTGG+GGG + tig0004148:67909-67928 Msa1340450:CDS 55.0%
CATGGGGACCATTTGTGGTG+AGG - tig0004148:67968-67987 None:intergenic 55.0%
! TGGCCTGATTGGCTGTGAAG+TGG - tig0004148:68058-68077 None:intergenic 55.0%
TCAGGCCATCATCGAAGCAG+TGG + tig0004148:68070-68089 Msa1340450:CDS 55.0%
CGTAGTCGATGACATGGACG+CGG - tig0004148:68106-68125 None:intergenic 55.0%
GCATTATCGCGGACAGGAAC+TGG + tig0004148:68206-68225 Msa1340450:CDS 55.0%
!! TCGCCTGCCGGTTTCTTGTA+CGG - tig0004148:68249-68268 None:intergenic 55.0%
GAAGGAGGTTAATCGCCTGC+CGG - tig0004148:68261-68280 None:intergenic 55.0%
CTGAGTCTAACCTGCAGTGG+TGG - tig0004148:68313-68332 None:intergenic 55.0%
GCTTGTACGTGGAGAGGCTT+TGG + tig0004148:68361-68380 Msa1340450:CDS 55.0%
GGTGCACGGTAACTAAGGTG+AGG - tig0004148:68410-68429 None:intergenic 55.0%
! AAGCAACCGATTCCGGTGCA+CGG - tig0004148:68424-68443 None:intergenic 55.0%
ATACCCTCTCCACCAAAGCC+CGG - tig0004148:68613-68632 None:intergenic 55.0%
CCTAGGATTGCAGGCTCGTT+GGG + tig0004148:68641-68660 Msa1340450:CDS 55.0%
GGCCGGATATATAGAACGGG+TGG + tig0004148:68662-68681 Msa1340450:CDS 55.0%
GTGAAGAGGAGAGAAGGTCG+TGG + tig0004148:68684-68703 Msa1340450:CDS 55.0%
GAAGAGGAGAGAAGGTCGTG+GGG + tig0004148:68686-68705 Msa1340450:CDS 55.0%
TAGGGTTGAAGAGGTGGGTG+TGG + tig0004148:68805-68824 Msa1340450:CDS 55.0%
AGGGTTGAAGAGGTGGGTGT+GGG + tig0004148:68806-68825 Msa1340450:CDS 55.0%
AGCTGTGTCCAGAGAAGTGG+AGG - tig0004148:67440-67459 None:intergenic 55.0%
!! GGAAGTAGGGGTGTTGGTGA+GGG - tig0004148:67463-67482 None:intergenic 55.0%
! ATCGTCGGAAGTAGGGGTGT+TGG - tig0004148:67469-67488 None:intergenic 55.0%
ATGGTTGCACCTGGAACCAC+TGG + tig0004148:67493-67512 Msa1340450:CDS 55.0%
AGTTGACGATGGGAGACCAG+TGG - tig0004148:67512-67531 None:intergenic 55.0%
! ACTGGTCTCCCATCGTCAAC+TGG + tig0004148:67511-67530 Msa1340450:CDS 55.0%
CTGGTCTCCCATCGTCAACT+GGG + tig0004148:67512-67531 Msa1340450:CDS 55.0%
! GTCATCTGGGGCACCTGTAA+AGG - tig0004148:67541-67560 None:intergenic 55.0%
ACTAAGCTGGTCGAGGACAG+TGG - tig0004148:67601-67620 None:intergenic 55.0%
!! TGGATGGACTAAGCTGGTCG+AGG - tig0004148:67608-67627 None:intergenic 55.0%
!! GTGGTGGTTGTGGTGATGGA+TGG - tig0004148:67624-67643 None:intergenic 55.0%
AACCACCACCACCACAACCA+CGG + tig0004148:67635-67654 Msa1340450:CDS 55.0%
TTCCTCATCCGTGGTTGTGG+TGG - tig0004148:67646-67665 None:intergenic 55.0%
!! GGACTACTAGAAGGTGCTGG+GGG + tig0004148:67909-67928 Msa1340450:CDS 55.0%
CATGGGGACCATTTGTGGTG+AGG - tig0004148:67968-67987 None:intergenic 55.0%
! TGGCCTGATTGGCTGTGAAG+TGG - tig0004148:68058-68077 None:intergenic 55.0%
TCAGGCCATCATCGAAGCAG+TGG + tig0004148:68070-68089 Msa1340450:CDS 55.0%
CGTAGTCGATGACATGGACG+CGG - tig0004148:68106-68125 None:intergenic 55.0%
GCATTATCGCGGACAGGAAC+TGG + tig0004148:68206-68225 Msa1340450:CDS 55.0%
!! TCGCCTGCCGGTTTCTTGTA+CGG - tig0004148:68249-68268 None:intergenic 55.0%
GAAGGAGGTTAATCGCCTGC+CGG - tig0004148:68261-68280 None:intergenic 55.0%
CTGAGTCTAACCTGCAGTGG+TGG - tig0004148:68313-68332 None:intergenic 55.0%
GCTTGTACGTGGAGAGGCTT+TGG + tig0004148:68361-68380 Msa1340450:CDS 55.0%
GGTGCACGGTAACTAAGGTG+AGG - tig0004148:68410-68429 None:intergenic 55.0%
! AAGCAACCGATTCCGGTGCA+CGG - tig0004148:68424-68443 None:intergenic 55.0%
ATACCCTCTCCACCAAAGCC+CGG - tig0004148:68613-68632 None:intergenic 55.0%
CCTAGGATTGCAGGCTCGTT+GGG + tig0004148:68641-68660 Msa1340450:CDS 55.0%
GGCCGGATATATAGAACGGG+TGG + tig0004148:68662-68681 Msa1340450:CDS 55.0%
GTGAAGAGGAGAGAAGGTCG+TGG + tig0004148:68684-68703 Msa1340450:CDS 55.0%
GAAGAGGAGAGAAGGTCGTG+GGG + tig0004148:68686-68705 Msa1340450:CDS 55.0%
TAGGGTTGAAGAGGTGGGTG+TGG + tig0004148:68805-68824 Msa1340450:CDS 55.0%
AGGGTTGAAGAGGTGGGTGT+GGG + tig0004148:68806-68825 Msa1340450:CDS 55.0%
GGGAGCTGTGTCCAGAGAAG+TGG - tig0004148:67443-67462 None:intergenic 60.0%
!! CGGAAGTAGGGGTGTTGGTG+AGG - tig0004148:67464-67483 None:intergenic 60.0%
GATGGGAGACCAGTGGTTCC+AGG - tig0004148:67505-67524 None:intergenic 60.0%
!! GGTGGTGGTGGTTGTGGTGA+TGG - tig0004148:67628-67647 None:intergenic 60.0%
!! GGTTGTGGTGGTGGTGGTTG+TGG - tig0004148:67634-67653 None:intergenic 60.0%
!! ATCCGTGGTTGTGGTGGTGG+TGG - tig0004148:67640-67659 None:intergenic 60.0%
CTCATCCGTGGTTGTGGTGG+TGG - tig0004148:67643-67662 None:intergenic 60.0%
CACCACCACAACCACGGATG+AGG + tig0004148:67641-67660 Msa1340450:CDS 60.0%
! GCACCTATTGATGGCTGGCG+CGG + tig0004148:67752-67771 Msa1340450:CDS 60.0%
CTTCCGCGCCAGCCATCAAT+AGG - tig0004148:67758-67777 None:intergenic 60.0%
CGGCCACTTCACAGCCAATC+AGG + tig0004148:68052-68071 Msa1340450:CDS 60.0%
GTGGGCCACTGCTTCGATGA+TGG - tig0004148:68078-68097 None:intergenic 60.0%
TATCGCGGACAGGAACTGGC+CGG + tig0004148:68210-68229 Msa1340450:CDS 60.0%
GTACGGTGGCGATTGACCTC+CGG - tig0004148:68232-68251 None:intergenic 60.0%
!! CCTGCCGGTTTCTTGTACGG+TGG - tig0004148:68246-68265 None:intergenic 60.0%
CCACCGTACAAGAAACCGGC+AGG + tig0004148:68243-68262 Msa1340450:CDS 60.0%
TTGTCCAAGGGAAGCGGCGA+AGG - tig0004148:68279-68298 None:intergenic 60.0%
TACCCTCTCCACCAAAGCCC+GGG - tig0004148:68612-68631 None:intergenic 60.0%
GCCTAGGATTGCAGGCTCGT+TGG + tig0004148:68640-68659 Msa1340450:CDS 60.0%
CCCAACGAGCCTGCAATCCT+AGG - tig0004148:68644-68663 None:intergenic 60.0%
CGGGTGGTGAAGAGGAGAGA+AGG + tig0004148:68678-68697 Msa1340450:CDS 60.0%
AGAGAAGGTCGTGGGGAGAG+TGG + tig0004148:68693-68712 Msa1340450:CDS 60.0%
AGGTCGTGGGGAGAGTGGTT+AGG + tig0004148:68698-68717 Msa1340450:CDS 60.0%
GGGAGCTGTGTCCAGAGAAG+TGG - tig0004148:67443-67462 None:intergenic 60.0%
!! CGGAAGTAGGGGTGTTGGTG+AGG - tig0004148:67464-67483 None:intergenic 60.0%
GATGGGAGACCAGTGGTTCC+AGG - tig0004148:67505-67524 None:intergenic 60.0%
!! GGTGGTGGTGGTTGTGGTGA+TGG - tig0004148:67628-67647 None:intergenic 60.0%
!! GGTTGTGGTGGTGGTGGTTG+TGG - tig0004148:67634-67653 None:intergenic 60.0%
!! ATCCGTGGTTGTGGTGGTGG+TGG - tig0004148:67640-67659 None:intergenic 60.0%
CTCATCCGTGGTTGTGGTGG+TGG - tig0004148:67643-67662 None:intergenic 60.0%
CACCACCACAACCACGGATG+AGG + tig0004148:67641-67660 Msa1340450:CDS 60.0%
! GCACCTATTGATGGCTGGCG+CGG + tig0004148:67752-67771 Msa1340450:CDS 60.0%
CTTCCGCGCCAGCCATCAAT+AGG - tig0004148:67758-67777 None:intergenic 60.0%
CGGCCACTTCACAGCCAATC+AGG + tig0004148:68052-68071 Msa1340450:CDS 60.0%
GTGGGCCACTGCTTCGATGA+TGG - tig0004148:68078-68097 None:intergenic 60.0%
TATCGCGGACAGGAACTGGC+CGG + tig0004148:68210-68229 Msa1340450:CDS 60.0%
GTACGGTGGCGATTGACCTC+CGG - tig0004148:68232-68251 None:intergenic 60.0%
!! CCTGCCGGTTTCTTGTACGG+TGG - tig0004148:68246-68265 None:intergenic 60.0%
CCACCGTACAAGAAACCGGC+AGG + tig0004148:68243-68262 Msa1340450:CDS 60.0%
TTGTCCAAGGGAAGCGGCGA+AGG - tig0004148:68279-68298 None:intergenic 60.0%
TACCCTCTCCACCAAAGCCC+GGG - tig0004148:68612-68631 None:intergenic 60.0%
GCCTAGGATTGCAGGCTCGT+TGG + tig0004148:68640-68659 Msa1340450:CDS 60.0%
CCCAACGAGCCTGCAATCCT+AGG - tig0004148:68644-68663 None:intergenic 60.0%
CGGGTGGTGAAGAGGAGAGA+AGG + tig0004148:68678-68697 Msa1340450:CDS 60.0%
AGAGAAGGTCGTGGGGAGAG+TGG + tig0004148:68693-68712 Msa1340450:CDS 60.0%
AGGTCGTGGGGAGAGTGGTT+AGG + tig0004148:68698-68717 Msa1340450:CDS 60.0%
GCTGGCGCGGAAGCCTTAAC+CGG + tig0004148:67765-67784 Msa1340450:CDS 65.0%
GACATGGACGCGGCGTTCGT+GGG - tig0004148:68096-68115 None:intergenic 65.0%
TGACATGGACGCGGCGTTCG+TGG - tig0004148:68097-68116 None:intergenic 65.0%
ACCTCCTTCGCCGCTTCCCT+TGG + tig0004148:68272-68291 Msa1340450:CDS 65.0%
TCCAAGGGAAGCGGCGAAGG+AGG - tig0004148:68276-68295 None:intergenic 65.0%
TTCCGATGCAGAACCGGGCC+CGG + tig0004148:68591-68610 Msa1340450:CDS 65.0%
GGATTGCAGGCTCGTTGGGC+CGG + tig0004148:68645-68664 Msa1340450:CDS 65.0%
GCTGGCGCGGAAGCCTTAAC+CGG + tig0004148:67765-67784 Msa1340450:CDS 65.0%
GACATGGACGCGGCGTTCGT+GGG - tig0004148:68096-68115 None:intergenic 65.0%
TGACATGGACGCGGCGTTCG+TGG - tig0004148:68097-68116 None:intergenic 65.0%
ACCTCCTTCGCCGCTTCCCT+TGG + tig0004148:68272-68291 Msa1340450:CDS 65.0%
TCCAAGGGAAGCGGCGAAGG+AGG - tig0004148:68276-68295 None:intergenic 65.0%
TTCCGATGCAGAACCGGGCC+CGG + tig0004148:68591-68610 Msa1340450:CDS 65.0%
GGATTGCAGGCTCGTTGGGC+CGG + tig0004148:68645-68664 Msa1340450:CDS 65.0%
TCCGATGCAGAACCGGGCCC+GGG + tig0004148:68592-68611 Msa1340450:CDS 70.0%
TCTCCACCAAAGCCCGGGCC+CGG - tig0004148:68607-68626 None:intergenic 70.0%
! GGCCCGGGCTTTGGTGGAGA+GGG + tig0004148:68607-68626 Msa1340450:CDS 70.0%
TCCGATGCAGAACCGGGCCC+GGG + tig0004148:68592-68611 Msa1340450:CDS 70.0%
TCTCCACCAAAGCCCGGGCC+CGG - tig0004148:68607-68626 None:intergenic 70.0%
! GGCCCGGGCTTTGGTGGAGA+GGG + tig0004148:68607-68626 Msa1340450:CDS 70.0%
CGCGGACAGGAACTGGCCGG+AGG + tig0004148:68213-68232 Msa1340450:CDS 75.0%
GCCCGGGCCCGGTTCTGCAT+CGG - tig0004148:68596-68615 None:intergenic 75.0%
GCAGAACCGGGCCCGGGCTT+TGG + tig0004148:68598-68617 Msa1340450:CDS 75.0%
! GAACCGGGCCCGGGCTTTGG+TGG + tig0004148:68601-68620 Msa1340450:CDS 75.0%
! GGGCCCGGGCTTTGGTGGAG+AGG + tig0004148:68606-68625 Msa1340450:CDS 75.0%
CGCGGACAGGAACTGGCCGG+AGG + tig0004148:68213-68232 Msa1340450:CDS 75.0%
GCCCGGGCCCGGTTCTGCAT+CGG - tig0004148:68596-68615 None:intergenic 75.0%
GCAGAACCGGGCCCGGGCTT+TGG + tig0004148:68598-68617 Msa1340450:CDS 75.0%
! GAACCGGGCCCGGGCTTTGG+TGG + tig0004148:68601-68620 Msa1340450:CDS 75.0%
! GGGCCCGGGCTTTGGTGGAG+AGG + tig0004148:68606-68625 Msa1340450:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0004148 gene 67405 68919 67405 ID=Msa1340450;Name=Msa1340450
tig0004148 mRNA 67405 68919 67405 ID=Msa1340450-mRNA-1;Parent=Msa1340450;Name=Msa1340450-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|504
tig0004148 exon 67405 68919 67405 ID=Msa1340450-mRNA-1:exon:2611;Parent=Msa1340450-mRNA-1
tig0004148 CDS 67405 68919 67405 ID=Msa1340450-mRNA-1:cds;Parent=Msa1340450-mRNA-1
Gene Sequence

>Msa1340450

ATGGACATGATGGACATGGATGCCATCAATGACCTCCACTTCTCTGGACACAGCTCCCTCACCAACACCCCTACTTCCGACGATGATTATGGTTGCACCTGGAACCACTGGTCTCCCATCGTCAACTGGGACACCTTTACAGGTGCCCCAGATGACTTTCACCACCTCATGGACACAATCATCGAGGACAGAACCACTGTCCTCGACCAGCTTAGTCCATCCATCACCACAACCACCACCACCACAACCACGGATGAGGAAGAAGAAGAAATGGAAACAACAACCACAACAACAACGACAGAAAAAACACAAGAAGTTGGTGATGATTCAAAAGGGCTAAAACTAGTGCACCTATTGATGGCTGGCGCGGAAGCCTTAACCGGTTCAACCAAAAACCGTGACTTAGCTCGAGTGATATTGATCCGGCTCAAGGAATTAGTCTCACAACATGCTAACGGCTCTAACATGGAGAGACTCGCCGCTCATTTCACCGAAGCCCTTCATGGACTACTAGAAGGTGCTGGGGGTGCGCACAACAACCACCACAACAACAAACATTACCTCACCACAAATGGTCCCCATGACAACCAAAACGACACACTTGCTGCTTTCCAACTACTTCAAGACATGTCACCTTACGTCAAATTCGGCCACTTCACAGCCAATCAGGCCATCATCGAAGCAGTGGCCCACGAACGCCGCGTCCATGTCATCGACTACGACATCATGGAAGGGGTCCAATGGGCTTCATTAATCCAATCACTAGCTTCCAACAACAACGGTCCTCATCTTCGGATAACCGCATTATCGCGGACAGGAACTGGCCGGAGGTCAATCGCCACCGTACAAGAAACCGGCAGGCGATTAACCTCCTTCGCCGCTTCCCTTGGACAACCGTTTTCTTTCCACCACTGCAGGTTAGACTCAGATGAAACTTTCCGTCCTTCTGCATTAAAGCTTGTACGTGGAGAGGCTTTGGTTTTCAACTGCATGCTGAATTTACCTCACCTTAGTTACCGTGCACCGGAATCGGTTGCTTCATTCTTGAACGGAGCAAAAACGTTGAATCCAAAGCTTGTGACGTTGGTGGAAGAAGAAGTTGGTTCGGTAGTTGGTGGGTTTGTGGAAAGGTTCATGGACTCACTTCATCATTATTCAGCGGTTTTTGATTCATTGGAGGCTGGTTTTCCGATGCAGAACCGGGCCCGGGCTTTGGTGGAGAGGGTATTTTTTGGGCCTAGGATTGCAGGCTCGTTGGGCCGGATATATAGAACGGGTGGTGAAGAGGAGAGAAGGTCGTGGGGAGAGTGGTTAGGTGAGTTAGGGTTTAGGGGAGTTCCGGTGAGCTTTGCAAATCATTGTCAAGCAAAGCTGTTGTTAGGGCTTTTTAACGATGGGTATAGGGTTGAAGAGGTGGGTGTGGGTAGTAATAAGTTGGTGTTGGATTGGAAATCAAGGCGTTTGCTTTCTGCTTCCCTTTGGACTTGTTCTTCTTCTTCAGATTCTGATTTATAG
Protein sequence

>Msa1340450

MDMMDMDAINDLHFSGHSSLTNTPTSDDDYGCTWNHWSPIVNWDTFTGAPDDFHHLMDTIIEDRTTVLDQLSPSITTTTTTTTTDEEEEEMETTTTTTTTEKTQEVGDDSKGLKLVHLLMAGAEALTGSTKNRDLARVILIRLKELVSQHANGSNMERLAAHFTEALHGLLEGAGGAHNNHHNNKHYLTTNGPHDNQNDTLAAFQLLQDMSPYVKFGHFTANQAIIEAVAHERRVHVIDYDIMEGVQWASLIQSLASNNNGPHLRITALSRTGTGRRSIATVQETGRRLTSFAASLGQPFSFHHCRLDSDETFRPSALKLVRGEALVFNCMLNLPHLSYRAPESVASFLNGAKTLNPKLVTLVEEEVGSVVGGFVERFMDSLHHYSAVFDSLEAGFPMQNRARALVERVFFGPRIAGSLGRIYRTGGEEERRSWGEWLGELGFRGVPVSFANHCQAKLLLGLFNDGYRVEEVGVGSNKLVLDWKSRRLLSASLWTCSSSSDSDL*