Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1344290 | XP_003592481.1 | 72.932 | 133 | 31 | 1 | 2 | 134 | 138 | 265 | 3.60e-52 | 186 |
Msa1344290 | XP_003592481.1 | 81.443 | 291 | 26 | 4 | 122 | 401 | 14 | 287 | 7.19e-156 | 451 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1344290 | sp|Q7XHI9|BH084_ARATH | 40.000 | 315 | 147 | 9 | 126 | 400 | 15 | 327 | 3.36e-50 | 175 |
Msa1344290 | sp|Q7XHI9|BH084_ARATH | 64.583 | 96 | 30 | 2 | 42 | 134 | 212 | 306 | 1.12e-27 | 114 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1344290 | G7IET1 | 72.932 | 133 | 31 | 1 | 2 | 134 | 138 | 265 | 1.72e-52 | 186 |
Msa1344290 | G7IET1 | 81.443 | 291 | 26 | 4 | 122 | 401 | 14 | 287 | 3.44e-156 | 451 |
Gene ID | Type | Classification |
---|---|---|
Msa1344290 | TF | bHLH |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1344290 | MtrunA17_Chr1g0207311 | 81.443 | 291 | 26 | 4 | 122 | 401 | 14 | 287 | 6.62e-160 | 451 |
Msa1344290 | MtrunA17_Chr1g0207311 | 72.932 | 133 | 31 | 1 | 2 | 134 | 138 | 265 | 3.32e-56 | 186 |
Msa1344290 | MtrunA17_Chr5g0393721 | 47.826 | 299 | 124 | 9 | 126 | 397 | 18 | 311 | 1.21e-66 | 214 |
Msa1344290 | MtrunA17_Chr5g0393721 | 56.115 | 139 | 53 | 4 | 2 | 134 | 157 | 293 | 2.88e-31 | 121 |
Msa1344290 | MtrunA17_Chr1g0207301 | 43.750 | 320 | 114 | 10 | 126 | 394 | 68 | 372 | 5.52e-57 | 191 |
Msa1344290 | MtrunA17_Chr1g0207301 | 52.555 | 137 | 61 | 2 | 2 | 134 | 221 | 357 | 1.02e-31 | 124 |
Msa1344290 | MtrunA17_Chr3g0134741 | 50.286 | 175 | 72 | 3 | 232 | 394 | 142 | 313 | 2.23e-44 | 156 |
Msa1344290 | MtrunA17_Chr3g0134741 | 52.137 | 117 | 45 | 2 | 18 | 134 | 193 | 298 | 4.87e-26 | 107 |
Msa1344290 | MtrunA17_Chr1g0152651 | 83.117 | 77 | 13 | 0 | 309 | 385 | 273 | 349 | 1.08e-37 | 139 |
Msa1344290 | MtrunA17_Chr1g0152651 | 70.423 | 71 | 21 | 0 | 64 | 134 | 273 | 343 | 2.38e-25 | 105 |
Msa1344290 | MtrunA17_Chr5g0435021 | 50.538 | 93 | 41 | 2 | 288 | 378 | 197 | 286 | 1.11e-23 | 100 |
Msa1344290 | MtrunA17_Chr5g0435021 | 62.121 | 66 | 25 | 0 | 63 | 128 | 216 | 281 | 3.39e-20 | 90.5 |
Msa1344290 | MtrunA17_Chr1g0207321 | 46.364 | 110 | 26 | 3 | 154 | 235 | 23 | 127 | 3.18e-18 | 80.5 |
Msa1344290 | MtrunA17_Chr8g0384141 | 48.148 | 81 | 42 | 0 | 294 | 374 | 98 | 178 | 1.38e-17 | 82.0 |
Msa1344290 | MtrunA17_Chr8g0384141 | 55.882 | 68 | 29 | 1 | 59 | 125 | 107 | 174 | 4.61e-16 | 77.8 |
Msa1344290 | MtrunA17_Chr3g0134001 | 46.512 | 86 | 41 | 2 | 74 | 157 | 180 | 262 | 6.36e-17 | 80.5 |
Msa1344290 | MtrunA17_Chr3g0134001 | 46.914 | 81 | 43 | 0 | 319 | 399 | 180 | 260 | 1.51e-16 | 79.3 |
Msa1344290 | MtrunA17_Chr4g0074161 | 56.061 | 66 | 29 | 0 | 308 | 373 | 204 | 269 | 9.39e-16 | 78.6 |
Msa1344290 | MtrunA17_Chr4g0074161 | 46.835 | 79 | 37 | 1 | 48 | 126 | 194 | 267 | 2.11e-14 | 74.3 |
Msa1344290 | MtrunA17_Chr7g0243041 | 56.364 | 55 | 24 | 0 | 317 | 371 | 33 | 87 | 3.01e-15 | 72.8 |
Msa1344290 | MtrunA17_Chr7g0243041 | 57.692 | 52 | 22 | 0 | 73 | 124 | 34 | 85 | 1.01e-14 | 71.2 |
Msa1344290 | MtrunA17_Chr1g0190731 | 51.389 | 72 | 35 | 0 | 302 | 373 | 185 | 256 | 5.49e-14 | 72.8 |
Msa1344290 | MtrunA17_Chr1g0190731 | 49.296 | 71 | 36 | 0 | 56 | 126 | 184 | 254 | 4.39e-13 | 70.1 |
Msa1344290 | MtrunA17_Chr1g0193321 | 46.970 | 66 | 30 | 1 | 308 | 373 | 465 | 525 | 2.59e-13 | 71.6 |
Msa1344290 | MtrunA17_Chr1g0193321 | 44.118 | 68 | 37 | 1 | 72 | 138 | 469 | 536 | 2.27e-12 | 68.9 |
Msa1344290 | MtrunA17_Chr1g0153241 | 37.500 | 80 | 45 | 1 | 308 | 387 | 88 | 162 | 6.62e-13 | 68.6 |
Msa1344290 | MtrunA17_Chr1g0153241 | 35.780 | 109 | 63 | 3 | 81 | 187 | 101 | 204 | 1.12e-11 | 64.7 |
Msa1344290 | MtrunA17_Chr1g0182791 | 41.333 | 75 | 39 | 1 | 299 | 373 | 311 | 380 | 2.90e-12 | 68.2 |
Msa1344290 | MtrunA17_Chr3g0095391 | 42.466 | 73 | 32 | 2 | 307 | 379 | 311 | 373 | 3.77e-12 | 67.8 |
Msa1344290 | MtrunA17_Chr5g0402031 | 38.235 | 68 | 42 | 0 | 319 | 386 | 114 | 181 | 1.78e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1344290 | AT2G14760.1 | 40.000 | 315 | 147 | 9 | 126 | 400 | 15 | 327 | 3.42e-51 | 175 |
Msa1344290 | AT2G14760.1 | 64.583 | 96 | 30 | 2 | 42 | 134 | 212 | 306 | 1.13e-28 | 114 |
Msa1344290 | AT2G14760.3 | 38.415 | 328 | 147 | 10 | 126 | 400 | 15 | 340 | 1.19e-47 | 166 |
Msa1344290 | AT2G14760.3 | 56.881 | 109 | 30 | 3 | 42 | 134 | 212 | 319 | 2.79e-25 | 105 |
Msa1344290 | AT4G33880.1 | 35.821 | 335 | 144 | 9 | 126 | 392 | 17 | 348 | 1.52e-45 | 160 |
Msa1344290 | AT4G33880.1 | 60.606 | 99 | 38 | 1 | 37 | 134 | 237 | 335 | 4.71e-28 | 113 |
Msa1344290 | AT5G43175.1 | 75.862 | 87 | 21 | 0 | 306 | 392 | 128 | 214 | 1.55e-41 | 146 |
Msa1344290 | AT5G43175.1 | 65.432 | 81 | 28 | 0 | 61 | 141 | 128 | 208 | 5.76e-27 | 107 |
Msa1344290 | AT1G27740.1 | 77.381 | 84 | 19 | 0 | 309 | 392 | 166 | 249 | 6.34e-41 | 145 |
Msa1344290 | AT1G27740.1 | 59.341 | 91 | 32 | 1 | 64 | 154 | 166 | 251 | 8.89e-26 | 105 |
Msa1344290 | AT5G37800.1 | 52.273 | 88 | 41 | 1 | 291 | 378 | 183 | 269 | 2.10e-22 | 97.1 |
Msa1344290 | AT5G37800.1 | 46.465 | 99 | 40 | 1 | 32 | 130 | 181 | 266 | 3.99e-19 | 87.8 |
Msa1344290 | AT1G66470.1 | 60.000 | 70 | 27 | 1 | 309 | 378 | 195 | 263 | 9.53e-22 | 95.1 |
Msa1344290 | AT1G66470.1 | 47.872 | 94 | 36 | 1 | 37 | 130 | 180 | 260 | 1.57e-18 | 85.9 |
Msa1344290 | AT2G24260.2 | 50.617 | 81 | 40 | 0 | 304 | 384 | 29 | 109 | 1.39e-17 | 82.0 |
Msa1344290 | AT2G24260.2 | 32.704 | 159 | 97 | 3 | 59 | 217 | 29 | 177 | 2.97e-16 | 78.2 |
Msa1344290 | AT4G30980.1 | 57.143 | 70 | 30 | 0 | 304 | 373 | 124 | 193 | 2.71e-17 | 82.4 |
Msa1344290 | AT4G30980.1 | 42.718 | 103 | 54 | 1 | 23 | 125 | 93 | 190 | 8.72e-16 | 78.2 |
Msa1344290 | AT4G30980.2 | 57.143 | 70 | 30 | 0 | 304 | 373 | 172 | 241 | 3.46e-17 | 82.8 |
Msa1344290 | AT4G30980.2 | 42.718 | 103 | 54 | 1 | 23 | 125 | 141 | 238 | 9.75e-16 | 78.6 |
Msa1344290 | AT2G24260.1 | 57.143 | 70 | 30 | 0 | 304 | 373 | 132 | 201 | 5.01e-17 | 82.0 |
Msa1344290 | AT2G24260.1 | 32.704 | 159 | 97 | 3 | 59 | 217 | 132 | 280 | 2.41e-15 | 77.0 |
Msa1344290 | AT5G01305.1 | 53.226 | 62 | 29 | 0 | 308 | 369 | 35 | 96 | 1.18e-16 | 77.8 |
Msa1344290 | AT5G01305.1 | 45.946 | 74 | 40 | 0 | 62 | 135 | 34 | 107 | 1.83e-15 | 74.3 |
Msa1344290 | AT3G21330.1 | 58.929 | 56 | 23 | 0 | 317 | 372 | 276 | 331 | 5.58e-16 | 79.3 |
Msa1344290 | AT3G21330.1 | 46.067 | 89 | 40 | 3 | 73 | 158 | 277 | 360 | 9.81e-16 | 78.6 |
Msa1344290 | AT5G58010.1 | 47.619 | 84 | 40 | 1 | 290 | 373 | 83 | 162 | 6.23e-16 | 78.2 |
Msa1344290 | AT5G58010.1 | 29.534 | 193 | 109 | 5 | 35 | 217 | 73 | 248 | 7.52e-14 | 72.0 |
Msa1344290 | AT4G00120.1 | 51.852 | 54 | 26 | 0 | 319 | 372 | 121 | 174 | 1.82e-14 | 72.0 |
Msa1344290 | AT4G00120.1 | 53.846 | 52 | 24 | 0 | 74 | 125 | 121 | 172 | 5.26e-14 | 70.9 |
Msa1344290 | AT1G09530.3 | 41.333 | 75 | 39 | 1 | 308 | 382 | 340 | 409 | 1.01e-12 | 70.1 |
Msa1344290 | AT1G09530.3 | 51.923 | 52 | 25 | 0 | 74 | 125 | 346 | 397 | 1.33e-11 | 66.6 |
Msa1344290 | AT1G09530.2 | 41.333 | 75 | 39 | 1 | 308 | 382 | 340 | 409 | 1.01e-12 | 70.1 |
Msa1344290 | AT1G09530.2 | 51.923 | 52 | 25 | 0 | 74 | 125 | 346 | 397 | 1.33e-11 | 66.6 |
Msa1344290 | AT1G09530.5 | 41.333 | 75 | 39 | 1 | 308 | 382 | 340 | 409 | 1.01e-12 | 70.1 |
Msa1344290 | AT1G09530.5 | 51.923 | 52 | 25 | 0 | 74 | 125 | 346 | 397 | 1.33e-11 | 66.6 |
Msa1344290 | AT1G09530.1 | 41.333 | 75 | 39 | 1 | 308 | 382 | 340 | 409 | 1.01e-12 | 70.1 |
Msa1344290 | AT1G09530.1 | 51.923 | 52 | 25 | 0 | 74 | 125 | 346 | 397 | 1.33e-11 | 66.6 |
Msa1344290 | AT1G09530.4 | 41.333 | 75 | 39 | 1 | 308 | 382 | 340 | 409 | 1.01e-12 | 70.1 |
Msa1344290 | AT1G09530.4 | 51.923 | 52 | 25 | 0 | 74 | 125 | 346 | 397 | 1.33e-11 | 66.6 |
Msa1344290 | AT1G09530.6 | 41.333 | 75 | 39 | 1 | 308 | 382 | 340 | 409 | 1.01e-12 | 70.1 |
Msa1344290 | AT1G09530.6 | 51.923 | 52 | 25 | 0 | 74 | 125 | 346 | 397 | 1.33e-11 | 66.6 |
Msa1344290 | AT2G20180.7 | 46.970 | 66 | 30 | 1 | 308 | 373 | 210 | 270 | 8.48e-12 | 66.6 |
Msa1344290 | AT2G20180.1 | 46.970 | 66 | 30 | 1 | 308 | 373 | 210 | 270 | 8.48e-12 | 66.6 |
Msa1344290 | AT2G20180.5 | 46.970 | 66 | 30 | 1 | 308 | 373 | 210 | 270 | 8.48e-12 | 66.6 |
Msa1344290 | AT2G20180.4 | 46.970 | 66 | 30 | 1 | 308 | 373 | 281 | 341 | 9.68e-12 | 67.0 |
Msa1344290 | AT2G20180.6 | 46.970 | 66 | 30 | 1 | 308 | 373 | 281 | 341 | 9.68e-12 | 67.0 |
Msa1344290 | AT2G20180.2 | 46.970 | 66 | 30 | 1 | 308 | 373 | 281 | 341 | 9.68e-12 | 67.0 |
Msa1344290 | AT2G20180.3 | 46.970 | 66 | 30 | 1 | 308 | 373 | 281 | 341 | 9.68e-12 | 67.0 |
Msa1344290 | AT4G36930.1 | 36.486 | 74 | 47 | 0 | 317 | 390 | 198 | 271 | 1.01e-11 | 66.2 |
Msa1344290 | AT4G00050.2 | 40.244 | 82 | 45 | 2 | 299 | 377 | 92 | 172 | 1.89e-11 | 65.1 |
Msa1344290 | AT2G46970.2 | 32.323 | 99 | 61 | 2 | 308 | 400 | 190 | 288 | 4.82e-11 | 64.3 |
Msa1344290 | AT2G46970.1 | 33.333 | 90 | 54 | 2 | 317 | 400 | 230 | 319 | 4.93e-11 | 64.3 |
Msa1344290 | AT4G00050.1 | 40.244 | 82 | 45 | 2 | 299 | 377 | 194 | 274 | 4.93e-11 | 64.3 |
Msa1344290 | AT4G00050.3 | 40.244 | 82 | 45 | 2 | 299 | 377 | 194 | 274 | 5.21e-11 | 64.3 |
Msa1344290 | AT2G46970.3 | 32.323 | 99 | 61 | 2 | 308 | 400 | 199 | 297 | 5.75e-11 | 64.3 |
Msa1344290 | AT2G20180.8 | 46.875 | 64 | 29 | 1 | 308 | 371 | 281 | 339 | 6.41e-11 | 63.9 |
Msa1344290 | AT5G67110.1 | 43.478 | 69 | 37 | 1 | 307 | 373 | 82 | 150 | 6.61e-11 | 62.0 |
Find 78 sgRNAs with CRISPR-Local
Find 682 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAATTTAGTCCTCAATATT+TGG | 0.162834 | tig0006806:+26044 | Msa1344290:CDS |
TTAGGTGCTTCAGGTTCTTT+TGG | 0.199723 | tig0006806:-20990 | None:intergenic |
TTTCTTCTCCAACAAATTAA+AGG | 0.200250 | tig0006806:+27292 | Msa1344290:CDS |
TTAGGTGCCTCATGTTCTTT+TGG | 0.203398 | tig0006806:-26473 | None:intergenic |
TTGCTCATAGAAGCAGATTT+TGG | 0.214748 | tig0006806:-26365 | None:intergenic |
CAAATATTGAGGACTAAATT+TGG | 0.216033 | tig0006806:-26043 | None:intergenic |
TGGCTCATAGAAGCAGATTT+TGG | 0.243169 | tig0006806:-20864 | None:intergenic |
CTACATAACTTAGGTGCTTC+AGG | 0.272661 | tig0006806:-20999 | None:intergenic |
TTCATCTTCCTTTAATTTGT+TGG | 0.289475 | tig0006806:-27300 | None:intergenic |
TAATTAACCTTAGTTCCATT+TGG | 0.317547 | tig0006806:-26960 | None:intergenic |
TTCATTCCATTGTAAGCAAT+TGG | 0.326950 | tig0006806:-27249 | None:intergenic |
CAGAAAACATTAGGAATGTT+AGG | 0.347576 | tig0006806:+26336 | Msa1344290:CDS |
ACCTGTGAAAAGCAGTTGTT+GGG | 0.352708 | tig0006806:-20915 | None:intergenic |
CAGTACTTGTGCTACTCCCT+TGG | 0.355284 | tig0006806:-25912 | None:intergenic |
AATGATAGCATTGATCATAA+AGG | 0.357619 | tig0006806:+26093 | Msa1344290:CDS |
AATCCTTCTCTGGAGCAAAA+TGG | 0.363323 | tig0006806:+20945 | Msa1344290:CDS |
AATTAACCTTAGTTCCATTT+GGG | 0.367023 | tig0006806:-26959 | None:intergenic |
AAAGCCACCTTAGTTCCATT+TGG | 0.367330 | tig0006806:-21272 | None:intergenic |
ATGTTTAGAGCCAGTGAAAC+TGG | 0.383865 | tig0006806:+26119 | Msa1344290:CDS |
AAGCCACCTTAGTTCCATTT+GGG | 0.398498 | tig0006806:-21271 | None:intergenic |
CTTCTATCCTCTTCTGAAGA+AGG | 0.401086 | tig0006806:-26180 | None:intergenic |
ATGATAGCATTGATCATAAA+GGG | 0.425204 | tig0006806:+26094 | Msa1344290:CDS |
TTCATGAATCAGTTCCTTAG+TGG | 0.426280 | tig0006806:+25826 | Msa1344290:CDS |
TGTTGGGGCCATGCCACGTT+AGG | 0.432755 | tig0006806:-20899 | None:intergenic |
AACCTGTGAAAAGCAGTTGT+TGG | 0.441611 | tig0006806:-20916 | None:intergenic |
AGAACATGAGGCACCTAAGT+TGG | 0.448507 | tig0006806:+26478 | Msa1344290:CDS |
TGCAGGTCTCAGAAAACATT+AGG | 0.448557 | tig0006806:+26327 | Msa1344290:intron |
TTGCAAACTCTTGTCCCAAA+TGG | 0.455826 | tig0006806:+21257 | Msa1344290:CDS |
TTGCAAACCCTTGTCCCAAA+TGG | 0.465028 | tig0006806:+26945 | Msa1344290:CDS |
CCTTGTCCCAAATGGAACTA+AGG | 0.465346 | tig0006806:+26953 | Msa1344290:CDS |
ACTTGTAGTGGTGGTAGAAA+AGG | 0.466992 | tig0006806:-25950 | None:intergenic |
GGTTAACTCTAATCCTTCTC+TGG | 0.470256 | tig0006806:+20935 | Msa1344290:CDS |
ATGTTATCATCCAAATATTG+AGG | 0.483894 | tig0006806:-26054 | None:intergenic |
GAACATGAGGCACCTAAGTT+GGG | 0.487621 | tig0006806:+26479 | Msa1344290:CDS |
TCTTGTCCCAAATGGAACTA+AGG | 0.490202 | tig0006806:+21265 | Msa1344290:CDS |
CCTTAGTTCCATTTGGGACA+AGG | 0.490672 | tig0006806:-26953 | None:intergenic |
CTTAGTTCCATTTGGGACAA+GGG | 0.492010 | tig0006806:-26952 | None:intergenic |
CAGAAAATATGAGGAATGTC+GGG | 0.493269 | tig0006806:+20835 | Msa1344290:intron |
TGTAGGTTTCAGAAAATATG+AGG | 0.493461 | tig0006806:+20826 | Msa1344290:intron |
AGTACTTGTGCTACTCCCTT+GGG | 0.501223 | tig0006806:-25911 | None:intergenic |
GCTTACAATGGAATGAACAT+TGG | 0.504026 | tig0006806:+27255 | Msa1344290:CDS |
AAGATTTAGGAGCTCAATAG+AGG | 0.507018 | tig0006806:+26227 | Msa1344290:CDS |
GCAGCAAGAACCAGTTTCAC+TGG | 0.514887 | tig0006806:-26129 | None:intergenic |
TTCTGAACCTTCTTCAGAAG+AGG | 0.515374 | tig0006806:+26173 | Msa1344290:CDS |
TCAGAAAATATGAGGAATGT+CGG | 0.520339 | tig0006806:+20834 | Msa1344290:intron |
GAAGAGAAAGAATAAATGAA+AGG | 0.522466 | tig0006806:+21225 | Msa1344290:CDS |
ATGCTCTGTGCATCAGTGAC+AGG | 0.522916 | tig0006806:-21044 | None:intergenic |
ATGCTCTGTGCATCAGTGGC+GGG | 0.523660 | tig0006806:-26527 | None:intergenic |
TCACATGTTGACTCAATTGG+AGG | 0.523673 | tig0006806:+26431 | Msa1344290:CDS |
TGCTAACAATGAAATGATGA+TGG | 0.528083 | tig0006806:+26149 | Msa1344290:CDS |
TAAGTTATGTAGAAAATCAA+AGG | 0.563263 | tig0006806:+21010 | Msa1344290:CDS |
TCAGCATGTGGAAAGTAAGA+TGG | 0.565231 | tig0006806:-25874 | None:intergenic |
TTCTAAGCTCTGAAGATATG+TGG | 0.576788 | tig0006806:+27217 | Msa1344290:CDS |
TTATGTAGAAAATCAAAGGC+AGG | 0.577202 | tig0006806:+21014 | Msa1344290:CDS |
GAAGAGGGCCTAACGTGGCA+TGG | 0.578421 | tig0006806:+20891 | Msa1344290:CDS |
ACGTTAGGCCCTCTTCATTG+TGG | 0.582294 | tig0006806:-20884 | None:intergenic |
AGAAAATCAAAGGCAGGAGG+TGG | 0.582545 | tig0006806:+21020 | Msa1344290:CDS |
TTCTATGAGCAACAATGAAG+AGG | 0.588809 | tig0006806:+26376 | Msa1344290:CDS |
TTCTATGAGCCACAATGAAG+AGG | 0.594727 | tig0006806:+20875 | Msa1344290:CDS |
TCTATGAGCCACAATGAAGA+GGG | 0.602341 | tig0006806:+20876 | Msa1344290:CDS |
AATGCTCTGTGCATCAGTGG+CGG | 0.603587 | tig0006806:-26528 | None:intergenic |
TATGCTCCAATTGCTTACAA+TGG | 0.606083 | tig0006806:+27243 | Msa1344290:CDS |
GAAGAGGACTTAATGTGGCA+TGG | 0.606487 | tig0006806:+26392 | Msa1344290:CDS |
GGATATCAGTACCATGCTTG+AGG | 0.609481 | tig0006806:+21386 | Msa1344290:CDS |
TTGGACAGCTTCCTCAAGCA+TGG | 0.619471 | tig0006806:-21397 | None:intergenic |
AGATATTAGCACTATGCTTG+AGG | 0.620150 | tig0006806:+27053 | Msa1344290:CDS |
CCTTCTCTGGAGCAAAATGG+AGG | 0.627664 | tig0006806:+20948 | Msa1344290:CDS |
GGTTCCACTACTTGTAGTGG+TGG | 0.630243 | tig0006806:-25959 | None:intergenic |
GTAGGTTCCACTACTTGTAG+TGG | 0.640555 | tig0006806:-25962 | None:intergenic |
TCTGAGCCCAAAAGAACATG+AGG | 0.642713 | tig0006806:+26466 | Msa1344290:CDS |
AAACACATAAAATCAGCATG+TGG | 0.651733 | tig0006806:-25886 | None:intergenic |
TTGTTGGAGAAGAAAAGCTG+AGG | 0.679207 | tig0006806:-27284 | None:intergenic |
TAGTGGACAGTACACAGCTG+AGG | 0.680277 | tig0006806:+25795 | Msa1344290:intron |
ACAATGAAGAGGACTTAATG+TGG | 0.680942 | tig0006806:+26387 | Msa1344290:CDS |
ATAAATGCTCTGTGCATCAG+TGG | 0.685863 | tig0006806:-26531 | None:intergenic |
ACAATGAAGAGGGCCTAACG+TGG | 0.686185 | tig0006806:+20886 | Msa1344290:CDS |
TGTAGAAAATCAAAGGCAGG+AGG | 0.688576 | tig0006806:+21017 | Msa1344290:CDS |
CCTGTGAAAAGCAGTTGTTG+GGG | 0.707435 | tig0006806:-20914 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTTATTTATTTATTTATT+TGG | + | tig0006806:21513-21532 | Msa1344290:intron | 0.0% |
!!! | TTTTATTTATTTATATTAAT+CGG | - | tig0006806:24453-24472 | None:intergenic | 0.0% |
!!! | AAAAAATTTATTTGATTTCT+TGG | - | tig0006806:22704-22723 | None:intergenic | 10.0% |
!! | TAATAGAATGAAATAATAAA+TGG | - | tig0006806:23061-23080 | None:intergenic | 10.0% |
!!! | TGATTTTTTTAAATTATTAG+CGG | - | tig0006806:24627-24646 | None:intergenic | 10.0% |
!!! | AAATTTATTTTTTGAATCAT+CGG | + | tig0006806:25308-25327 | Msa1344290:intron | 10.0% |
!! | GATTAATTAATTTATCTATT+TGG | + | tig0006806:27184-27203 | Msa1344290:intron | 10.0% |
!! | AAAAACTAAAAATAATAGGA+GGG | - | tig0006806:15666-15685 | None:intergenic | 15.0% |
!! | ACACAAAAACTAAAAATAAT+AGG | - | tig0006806:15670-15689 | None:intergenic | 15.0% |
!! | TGTTATGAAATAAATAGTTA+AGG | + | tig0006806:15687-15706 | Msa1344290:intron | 15.0% |
!! | TATGAATAATAATCAGAAAT+AGG | + | tig0006806:17574-17593 | Msa1344290:intron | 15.0% |
!! | ATATAAGTACTTAAAGTATA+AGG | + | tig0006806:18522-18541 | Msa1344290:intron | 15.0% |
!! | CTAATTACTCAATATATAAT+TGG | + | tig0006806:21316-21335 | Msa1344290:intron | 15.0% |
!! | TAAAAATTGTGAAAATATGT+AGG | + | tig0006806:21823-21842 | Msa1344290:intron | 15.0% |
!! | AATTCAACCAAATATTAAAA+TGG | + | tig0006806:21920-21939 | Msa1344290:intron | 15.0% |
!! | GATAGAATGAAATAATAAAT+GGG | - | tig0006806:22768-22787 | None:intergenic | 15.0% |
!! | TGATAGAATGAAATAATAAA+TGG | - | tig0006806:22769-22788 | None:intergenic | 15.0% |
!! | TTACTTATTTATTGTATAGA+GGG | - | tig0006806:22795-22814 | None:intergenic | 15.0% |
!! | TTTACTTATTTATTGTATAG+AGG | - | tig0006806:22796-22815 | None:intergenic | 15.0% |
!! | ATGAAATAATAAATGGTTAA+GGG | - | tig0006806:23054-23073 | None:intergenic | 15.0% |
!! | AATGAAATAATAAATGGTTA+AGG | - | tig0006806:23055-23074 | None:intergenic | 15.0% |
!! | TTTCTCTTAATACAATAAAT+AGG | + | tig0006806:23081-23100 | Msa1344290:intron | 15.0% |
!!! | TATTTTCATGAAGAAATATA+TGG | + | tig0006806:23949-23968 | Msa1344290:intron | 15.0% |
!!! | AATATAAACCTTTCTTTTAA+TGG | + | tig0006806:24136-24155 | Msa1344290:intron | 15.0% |
!! | TCATAATCATAATACTATAA+TGG | + | tig0006806:24250-24269 | Msa1344290:intron | 15.0% |
!! | AAAAATAATTGTTGATCAAT+TGG | - | tig0006806:24304-24323 | None:intergenic | 15.0% |
!!! | GAGTCATATATTTATTTTTA+TGG | + | tig0006806:24424-24443 | Msa1344290:intron | 15.0% |
!!! | TTTTTAACTTATATTTTTCC+AGG | - | tig0006806:24811-24830 | None:intergenic | 15.0% |
!! | CAAAAGATTACTAAAAAATA+TGG | + | tig0006806:25735-25754 | Msa1344290:intron | 15.0% |
!! | AGAGTATAGAATCAAAAAAT+TGG | + | tig0006806:15589-15608 | Msa1344290:intron | 20.0% |
!! | GAGTATAGAATCAAAAAATT+GGG | + | tig0006806:15590-15609 | Msa1344290:intron | 20.0% |
!! | CAAAAACTAAAAATAATAGG+AGG | - | tig0006806:15667-15686 | None:intergenic | 20.0% |
!!! | ATTTTTCTACAAAAAAGCAA+CGG | + | tig0006806:15773-15792 | Msa1344290:intron | 20.0% |
!! | AAGTTTAAATGCTATTATCA+AGG | + | tig0006806:15810-15829 | Msa1344290:intron | 20.0% |
!! | ACTCTTATATATATAGAGTT+TGG | + | tig0006806:15889-15908 | Msa1344290:intron | 20.0% |
!! | TCATTATAGAGTTTATTAGA+AGG | + | tig0006806:16690-16709 | Msa1344290:intron | 20.0% |
!! | TTTATTATCAACATGAATAC+TGG | + | tig0006806:18587-18606 | Msa1344290:intron | 20.0% |
!! | TTATTATCAACATGAATACT+GGG | + | tig0006806:18588-18607 | Msa1344290:intron | 20.0% |
!!! | AATTTTTGCTATCAAAAACA+TGG | - | tig0006806:19431-19450 | None:intergenic | 20.0% |
!!! | ATTTTGTTTCCTTGATAATA+TGG | - | tig0006806:15822-15841 | None:intergenic | 20.0% |
!! | ACTCTTATATATATAGAGTT+TGG | + | tig0006806:15889-15908 | Msa1344290:intron | 20.0% |
!!! | TAATCATGATTTTACTATGT+AGG | + | tig0006806:20809-20828 | Msa1344290:intron | 20.0% |
!!! | TTTGATTTTCTACATAACTT+AGG | - | tig0006806:21011-21030 | None:intergenic | 20.0% |
!! | TAAGTTATGTAGAAAATCAA+AGG | + | tig0006806:21010-21029 | Msa1344290:CDS | 20.0% |
!! | CAATATATAATTGGTTAAGA+TGG | + | tig0006806:21325-21344 | Msa1344290:intron | 20.0% |
!!! | TTTTTTTGTTTGTGAATTGT+AGG | + | tig0006806:21362-21381 | Msa1344290:intron | 20.0% |
!! | GCATATAAGAAATTGAAAAT+TGG | - | tig0006806:21472-21491 | None:intergenic | 20.0% |
!! | AGTGAAATTAAAAGAAAGAA+AGG | + | tig0006806:21888-21907 | Msa1344290:intron | 20.0% |
!!! | TGAATGTCCATTTTAATATT+TGG | - | tig0006806:21930-21949 | None:intergenic | 20.0% |
!! | ATTTAACATTATTGGATGAT+TGG | - | tig0006806:21988-22007 | None:intergenic | 20.0% |
!! | AATCATCCAATAATGTTAAA+TGG | + | tig0006806:21987-22006 | Msa1344290:intron | 20.0% |
!! | ACAAGAAAATAACATATCAT+TGG | + | tig0006806:22233-22252 | Msa1344290:intron | 20.0% |
!!! | ATATTTTTTTCTTCTCAAGT+AGG | - | tig0006806:22358-22377 | None:intergenic | 20.0% |
!! | ATGAAATAATAAATGGGTAA+GGG | - | tig0006806:22762-22781 | None:intergenic | 20.0% |
!! | AATGAAATAATAAATGGGTA+AGG | - | tig0006806:22763-22782 | None:intergenic | 20.0% |
!!! | AAAATACTTGTCGTTTTTTT+AGG | + | tig0006806:22951-22970 | Msa1344290:intron | 20.0% |
!!! | ACGAAATTAATTTGATTTCT+TGG | - | tig0006806:22989-23008 | None:intergenic | 20.0% |
!! | TTCGATACAACATTAATTAT+TGG | - | tig0006806:23131-23150 | None:intergenic | 20.0% |
!! | GTGAAGAAAAAAAAAATCAA+CGG | + | tig0006806:23610-23629 | Msa1344290:intron | 20.0% |
!! | TGAAGAAAAAAAAAATCAAC+GGG | + | tig0006806:23611-23630 | Msa1344290:intron | 20.0% |
!! | TAGTTGTAGCAAATATTAAT+TGG | + | tig0006806:24175-24194 | Msa1344290:intron | 20.0% |
!! | AGTTTACTAATTAACCATTT+AGG | - | tig0006806:24497-24516 | None:intergenic | 20.0% |
!! | TTAAAAACTGTTAACAAAAC+AGG | + | tig0006806:24824-24843 | Msa1344290:intron | 20.0% |
!!! | AATTGCGTTTATTTCTAAAT+AGG | + | tig0006806:25107-25126 | Msa1344290:intron | 20.0% |
!!! | ATTGCGTTTATTTCTAAATA+GGG | + | tig0006806:25108-25127 | Msa1344290:intron | 20.0% |
!! | ATGATATGCATTAAAGTAAT+AGG | - | tig0006806:25476-25495 | None:intergenic | 20.0% |
!!! | TTGTATTTTTATTACCACTA+AGG | - | tig0006806:25843-25862 | None:intergenic | 20.0% |
!!! | GGTAATAAAAATACAAGTTT+TGG | + | tig0006806:25847-25866 | Msa1344290:CDS | 20.0% |
!!! | TCACTAGATTAAATTTTGTT+TGG | + | tig0006806:26626-26645 | Msa1344290:intron | 20.0% |
!! | TTCAAATAAGTCAATACAAA+AGG | + | tig0006806:26815-26834 | Msa1344290:intron | 20.0% |
! | TTGGATAGAAGAAGATTAAA+AGG | + | tig0006806:16069-16088 | Msa1344290:intron | 25.0% |
! | TATTATGATGAGTTTGAGTA+GGG | + | tig0006806:16544-16563 | Msa1344290:intron | 25.0% |
! | TCAGCTTATAGAAGATTAAT+TGG | - | tig0006806:16645-16664 | None:intergenic | 25.0% |
!!! | GCTTTTAAAATCAAAGACAT+TGG | - | tig0006806:16852-16871 | None:intergenic | 25.0% |
! | ACAAAATCATGTAAATATGC+AGG | + | tig0006806:17646-17665 | Msa1344290:intron | 25.0% |
! | TCTAGAAATGAAGATTTCTT+TGG | + | tig0006806:17858-17877 | Msa1344290:intron | 25.0% |
!! | GTTAATTCCTTCAAAGTTTT+TGG | - | tig0006806:18006-18025 | None:intergenic | 25.0% |
! | TATTGTAAAGGACATGATAA+GGG | + | tig0006806:18037-18056 | Msa1344290:intron | 25.0% |
!!! | ACAAAGTTTTGAATATGTGA+AGG | + | tig0006806:18351-18370 | Msa1344290:intron | 25.0% |
! | TAACCCATAAAAATCTACTA+TGG | + | tig0006806:18400-18419 | Msa1344290:intron | 25.0% |
!! | TGACCATAGTAGATTTTTAT+GGG | - | tig0006806:18406-18425 | None:intergenic | 25.0% |
!! | ATGACCATAGTAGATTTTTA+TGG | - | tig0006806:18407-18426 | None:intergenic | 25.0% |
! | ATTACTTCACTTAGACATTT+GGG | - | tig0006806:18484-18503 | None:intergenic | 25.0% |
! | AATTACTTCACTTAGACATT+TGG | - | tig0006806:18485-18504 | None:intergenic | 25.0% |
!! | CAATATTTGGAGTTATTCTT+TGG | + | tig0006806:19482-19501 | Msa1344290:intron | 25.0% |
!! | TATTGAAGATTCTAGCATTT+TGG | - | tig0006806:19570-19589 | None:intergenic | 25.0% |
!!! | ACTGGTTTGAATGATAATTT+TGG | - | tig0006806:19704-19723 | None:intergenic | 25.0% |
! | AGTTAAATGTCTCTCATTAT+AGG | + | tig0006806:21175-21194 | Msa1344290:intron | 25.0% |
! | GAAGAGAAAGAATAAATGAA+AGG | + | tig0006806:21225-21244 | Msa1344290:CDS | 25.0% |
! | TTTCTTCTCCAACAAATTAA+AGG | + | tig0006806:21621-21640 | Msa1344290:intron | 25.0% |
!!! | TTCATCTTCCTTTAATTTGT+TGG | - | tig0006806:21632-21651 | None:intergenic | 25.0% |
!! | ACTTTTGTATTTGTTTGAAC+TGG | - | tig0006806:21747-21766 | None:intergenic | 25.0% |
! | ATTTCAATAGACAATGCATA+TGG | + | tig0006806:21770-21789 | Msa1344290:intron | 25.0% |
! | TGTCAACCATTTAACATTAT+TGG | - | tig0006806:21996-22015 | None:intergenic | 25.0% |
!!! | AGTTCCAATGTTTTAAGTTA+TGG | + | tig0006806:22054-22073 | Msa1344290:intron | 25.0% |
! | ACTTCCATAACTTAAAACAT+TGG | - | tig0006806:22061-22080 | None:intergenic | 25.0% |
! | AGAAAATAACATATCATTGG+TGG | + | tig0006806:22236-22255 | Msa1344290:intron | 25.0% |
! | TATAGCTACTATAAGAGAAA+AGG | - | tig0006806:22270-22289 | None:intergenic | 25.0% |
! | TGTGTCAAAGTTTGTAAAAT+TGG | + | tig0006806:22412-22431 | Msa1344290:intron | 25.0% |
! | GTGTCAAAGTTTGTAAAATT+GGG | + | tig0006806:22413-22432 | Msa1344290:intron | 25.0% |
!! | AAACATAGTGCAATTTTACT+GGG | - | tig0006806:22593-22612 | None:intergenic | 25.0% |
! | CGATATGATCTAATTAAACA+CGG | - | tig0006806:23245-23264 | None:intergenic | 25.0% |
! | CGTGTTTAATTAGATCATAT+CGG | + | tig0006806:23243-23262 | Msa1344290:intron | 25.0% |
! | TTGCTAAGTACTAATACTAT+TGG | - | tig0006806:23581-23600 | None:intergenic | 25.0% |
! | AGTATTAGTACTTAGCAAAT+AGG | + | tig0006806:23583-23602 | Msa1344290:intron | 25.0% |
! | GAAGAAAAAAAAAATCAACG+GGG | + | tig0006806:23612-23631 | Msa1344290:intron | 25.0% |
!!! | ACAACTAATTTTTTATCACG+TGG | - | tig0006806:24162-24181 | None:intergenic | 25.0% |
! | TAATGGCAAAAATGAATACA+CGG | + | tig0006806:24267-24286 | Msa1344290:intron | 25.0% |
! | ATAATTGTTGATCAATTGGT+AGG | - | tig0006806:24300-24319 | None:intergenic | 25.0% |
!! | TAGCCAAATATTTTATAAGC+CGG | - | tig0006806:24350-24369 | None:intergenic | 25.0% |
! | TAAATATATGACTCTGTTTC+TGG | - | tig0006806:24418-24437 | None:intergenic | 25.0% |
! | TTCAGTGTAATTATATGTGT+CGG | + | tig0006806:24652-24671 | Msa1344290:intron | 25.0% |
!!! | AATTTGTTAGAATGTTTGAC+AGG | + | tig0006806:24955-24974 | Msa1344290:intron | 25.0% |
! | AAGACTTGAATAGTATGATA+TGG | - | tig0006806:25040-25059 | None:intergenic | 25.0% |
!!! | TTGCGTTTATTTCTAAATAG+GGG | + | tig0006806:25109-25128 | Msa1344290:intron | 25.0% |
!! | TTTTGTGTCCAATATTTACA+TGG | + | tig0006806:25166-25185 | Msa1344290:intron | 25.0% |
! | TGATTGAACCATGTAAATAT+TGG | - | tig0006806:25177-25196 | None:intergenic | 25.0% |
! | TGAGACCAAATATAATTTAG+AGG | - | tig0006806:25515-25534 | None:intergenic | 25.0% |
! | TTATATTTGGTCTCAATTTC+AGG | + | tig0006806:25520-25539 | Msa1344290:intron | 25.0% |
! | TATATTTGGTCTCAATTTCA+GGG | + | tig0006806:25521-25540 | Msa1344290:intron | 25.0% |
! | AAAAGATCCCATTTCATAAT+TGG | - | tig0006806:25577-25596 | None:intergenic | 25.0% |
! | TATTTATACCTAACAACTGA+AGG | - | tig0006806:25633-25652 | None:intergenic | 25.0% |
! | TGAAAATATAGTAGCATTAG+TGG | - | tig0006806:25658-25677 | None:intergenic | 25.0% |
! | ATCTTCCAAACAAAAAAACA+TGG | - | tig0006806:26022-26041 | None:intergenic | 25.0% |
! | CAAATATTGAGGACTAAATT+TGG | - | tig0006806:26046-26065 | None:intergenic | 25.0% |
! | CAAATTTAGTCCTCAATATT+TGG | + | tig0006806:26044-26063 | Msa1344290:CDS | 25.0% |
! | ATGTTATCATCCAAATATTG+AGG | - | tig0006806:26057-26076 | None:intergenic | 25.0% |
!!! | AATGATAGCATTGATCATAA+AGG | + | tig0006806:26093-26112 | Msa1344290:CDS | 25.0% |
!!! | ATGATAGCATTGATCATAAA+GGG | + | tig0006806:26094-26113 | Msa1344290:CDS | 25.0% |
!! | TGATCATAATTTTACTATGC+AGG | + | tig0006806:26310-26329 | Msa1344290:intron | 25.0% |
! | AACATGTGAAAAACAGTTAT+TGG | - | tig0006806:26420-26439 | None:intergenic | 25.0% |
! | TTGTAGAAATGTCATTCAAA+GGG | - | tig0006806:26570-26589 | None:intergenic | 25.0% |
! | ATTGTAGAAATGTCATTCAA+AGG | - | tig0006806:26571-26590 | None:intergenic | 25.0% |
! | ATTTAATCTAGTGACAACAA+TGG | - | tig0006806:26620-26639 | None:intergenic | 25.0% |
! | AATTAACCTTAGTTCCATTT+GGG | - | tig0006806:26962-26981 | None:intergenic | 25.0% |
! | TAATTAACCTTAGTTCCATT+TGG | - | tig0006806:26963-26982 | None:intergenic | 25.0% |
! | ATGGAACTAAGGTTAATTAA+TGG | + | tig0006806:26964-26983 | Msa1344290:intron | 25.0% |
! | ATGGAAATGAAACTAACAAT+TGG | + | tig0006806:26983-27002 | Msa1344290:intron | 25.0% |
! | ATGAAACTAACAATTGGTTA+AGG | + | tig0006806:26989-27008 | Msa1344290:intron | 25.0% |
! | TTTCATTGTTTGTGAATTGT+AGG | + | tig0006806:27029-27048 | Msa1344290:intron | 25.0% |
! | ATGGAAATTATATGTAGAGA+AGG | - | tig0006806:27135-27154 | None:intergenic | 25.0% |
! | GCATATAAGAAACTGAAAAA+TGG | - | tig0006806:27154-27173 | None:intergenic | 25.0% |
!! | ATTCTATACTCTTCTGAAGT+AGG | - | tig0006806:15581-15600 | None:intergenic | 30.0% |
AATCTTCTTCTATCCAAGTT+GGG | - | tig0006806:16066-16085 | None:intergenic | 30.0% | |
TAATCTTCTTCTATCCAAGT+TGG | - | tig0006806:16067-16086 | None:intergenic | 30.0% | |
AGAAGAAGATTAAAAGGTTG+AGG | + | tig0006806:16075-16094 | Msa1344290:intron | 30.0% | |
! | ATCTGATCTTTGGAAGAAAT+AGG | + | tig0006806:16126-16145 | Msa1344290:intron | 30.0% |
! | TTGGTAATTCTCTTGTTTCA+TGG | - | tig0006806:16371-16390 | None:intergenic | 30.0% |
ATGAAACAAGAGAATTACCA+AGG | + | tig0006806:16370-16389 | Msa1344290:intron | 30.0% | |
AATTACCAAGGAAGAAACAA+TGG | + | tig0006806:16382-16401 | Msa1344290:intron | 30.0% | |
!!! | AGAGTTTTGAGATACCTTAA+AGG | - | tig0006806:16516-16535 | None:intergenic | 30.0% |
GTATTATGATGAGTTTGAGT+AGG | + | tig0006806:16543-16562 | Msa1344290:intron | 30.0% | |
TAAGAAATTGACTAAGTTGC+TGG | + | tig0006806:16571-16590 | Msa1344290:intron | 30.0% | |
AAGAAATTGACTAAGTTGCT+GGG | + | tig0006806:16572-16591 | Msa1344290:intron | 30.0% | |
TGGGTAATATATGTGATATC+AGG | + | tig0006806:16591-16610 | Msa1344290:intron | 30.0% | |
AATATATGTGATATCAGGTC+TGG | + | tig0006806:16596-16615 | Msa1344290:intron | 30.0% | |
AGTTTATTAGAAGGATCAGA+TGG | + | tig0006806:16699-16718 | Msa1344290:intron | 30.0% | |
! | TTAGAAGATTCAGGTTTACT+TGG | - | tig0006806:16744-16763 | None:intergenic | 30.0% |
!! | TTATGTTGATGATGTGATCT+TGG | - | tig0006806:16925-16944 | None:intergenic | 30.0% |
! | TTTGAGACCATATAAAGACT+TGG | + | tig0006806:17072-17091 | Msa1344290:intron | 30.0% |
AAACTCACCAAGTCTTTATA+TGG | - | tig0006806:17082-17101 | None:intergenic | 30.0% | |
AAAATCAAGCACAATGCTTA+TGG | - | tig0006806:17352-17371 | None:intergenic | 30.0% | |
! | AGCAGTAATTTCATTTTGCA+TGG | + | tig0006806:17447-17466 | Msa1344290:intron | 30.0% |
CTTCCAACAATCATGTTTAA+TGG | + | tig0006806:17474-17493 | Msa1344290:intron | 30.0% | |
!! | AGGTTTATGTTTAGTTCTAG+TGG | + | tig0006806:17666-17685 | Msa1344290:intron | 30.0% |
!! | TTTATGTTTAGTTCTAGTGG+AGG | + | tig0006806:17669-17688 | Msa1344290:intron | 30.0% |
GGAGTGATAATATGTAAAGA+AGG | + | tig0006806:17715-17734 | Msa1344290:intron | 30.0% | |
ATATGTAAAGAAGGAGAAAC+AGG | + | tig0006806:17724-17743 | Msa1344290:intron | 30.0% | |
AGATGTGAAATATTGCCAAT+TGG | + | tig0006806:17777-17796 | Msa1344290:intron | 30.0% | |
CAATTGGAAGAAAATTGAGT+GGG | + | tig0006806:17793-17812 | Msa1344290:intron | 30.0% | |
GATACAAGTCAGGATTTAAA+GGG | - | tig0006806:17906-17925 | None:intergenic | 30.0% | |
!! | GCTAGAAAGTATGTTTTCTT+GGG | - | tig0006806:17928-17947 | None:intergenic | 30.0% |
!! | AGCTAGAAAGTATGTTTTCT+TGG | - | tig0006806:17929-17948 | None:intergenic | 30.0% |
! | ACTTTGAAGGAATTAACATC+AGG | + | tig0006806:18009-18028 | Msa1344290:intron | 30.0% |
!! | CATCAGGTAAAGTATTGTAA+AGG | + | tig0006806:18025-18044 | Msa1344290:intron | 30.0% |
GTATTGTAAAGGACATGATA+AGG | + | tig0006806:18036-18055 | Msa1344290:intron | 30.0% | |
ATTGTAAAGGACATGATAAG+GGG | + | tig0006806:18038-18057 | Msa1344290:intron | 30.0% | |
!! | TGATTTTTGAGAACAAGAGT+TGG | + | tig0006806:18063-18082 | Msa1344290:intron | 30.0% |
GCATAAGACCAAAAGAAATT+AGG | + | tig0006806:18120-18139 | Msa1344290:intron | 30.0% | |
! | CCAAACTTCCTAATTTCTTT+TGG | - | tig0006806:18131-18150 | None:intergenic | 30.0% |
CCAAAAGAAATTAGGAAGTT+TGG | + | tig0006806:18128-18147 | Msa1344290:intron | 30.0% | |
TAGGAAGTTTGGATTGAAAA+AGG | + | tig0006806:18139-18158 | Msa1344290:intron | 30.0% | |
ATTGCTAAAGTTTCCATACA+TGG | - | tig0006806:18456-18475 | None:intergenic | 30.0% | |
ATGTATGGAAACTTTAGCAA+TGG | + | tig0006806:18455-18474 | Msa1344290:intron | 30.0% | |
TGTATGGAAACTTTAGCAAT+GGG | + | tig0006806:18456-18475 | Msa1344290:intron | 30.0% | |
TTACTTCACTTAGACATTTG+GGG | - | tig0006806:18483-18502 | None:intergenic | 30.0% | |
ATCAAATTGACCTTGAAATG+AGG | + | tig0006806:18933-18952 | Msa1344290:intron | 30.0% | |
CTTATATTCTCCTCATTTCA+AGG | - | tig0006806:18946-18965 | None:intergenic | 30.0% | |
ATGAGGAGAATATAAGACAT+TGG | + | tig0006806:18950-18969 | Msa1344290:intron | 30.0% | |
! | ATTGGTGATATGAAAAGAAG+AGG | + | tig0006806:18968-18987 | Msa1344290:intron | 30.0% |
GATATGAAAAGAAGAGGAAA+AGG | + | tig0006806:18974-18993 | Msa1344290:intron | 30.0% | |
!!! | TCTGTTTTAGTACATTATGC+TGG | - | tig0006806:19008-19027 | None:intergenic | 30.0% |
ACTAAAACAGATTGACCATT+TGG | + | tig0006806:19017-19036 | Msa1344290:intron | 30.0% | |
!! | CTCAATGTTACTTTACCAAA+TGG | - | tig0006806:19035-19054 | None:intergenic | 30.0% |
TTTGGTAAAGTAACATTGAG+AGG | + | tig0006806:19035-19054 | Msa1344290:intron | 30.0% | |
! | TAACAGTGTGATTTGTCTTA+TGG | + | tig0006806:19450-19469 | Msa1344290:intron | 30.0% |
! | TATTTGGAGTTATTCTTTGG+AGG | + | tig0006806:19485-19504 | Msa1344290:intron | 30.0% |
ATGCTAGAATCTTCAATAGA+AGG | + | tig0006806:19572-19591 | Msa1344290:intron | 30.0% | |
AGAAGGAGAAGTAATAATAG+TGG | + | tig0006806:19589-19608 | Msa1344290:intron | 30.0% | |
! | GAGTATACTTTGTTGATAGA+AGG | + | tig0006806:19641-19660 | Msa1344290:intron | 30.0% |
! | AAAAACTCAGGTTTTACTCA+TGG | - | tig0006806:19675-19694 | None:intergenic | 30.0% |
!!! | TTTTGGAGTTGTAAAAACTC+AGG | - | tig0006806:19687-19706 | None:intergenic | 30.0% |
! | CAAGTCATTCAGTTTTTAAC+TGG | - | tig0006806:19722-19741 | None:intergenic | 30.0% |
!! | GAAGTATTCAAGAACAGTTT+TGG | + | tig0006806:19862-19881 | Msa1344290:intron | 30.0% |
AAATCATCAATAGGAGGAAT+TGG | + | tig0006806:20085-20104 | Msa1344290:intron | 30.0% | |
AGAGAAAAACAGAGTATGAT+CGG | + | tig0006806:20329-20348 | Msa1344290:intron | 30.0% | |
CATAGAAGATAATGAACACA+AGG | - | tig0006806:20753-20772 | None:intergenic | 30.0% | |
TGTAGGTTTCAGAAAATATG+AGG | + | tig0006806:20826-20845 | Msa1344290:intron | 30.0% | |
TCAGAAAATATGAGGAATGT+CGG | + | tig0006806:20834-20853 | Msa1344290:intron | 30.0% | |
TTATGTAGAAAATCAAAGGC+AGG | + | tig0006806:21014-21033 | Msa1344290:CDS | 30.0% | |
TAAAGAAATGTCCTTCAAAG+GGG | - | tig0006806:21086-21105 | None:intergenic | 30.0% | |
CTAAAGAAATGTCCTTCAAA+GGG | - | tig0006806:21087-21106 | None:intergenic | 30.0% | |
ACTAAAGAAATGTCCTTCAA+AGG | - | tig0006806:21088-21107 | None:intergenic | 30.0% | |
TACCAATACAGTGGTTTAAT+TGG | - | tig0006806:21138-21157 | None:intergenic | 30.0% | |
AGAAAATGTTACCAATACAG+TGG | - | tig0006806:21147-21166 | None:intergenic | 30.0% | |
!! | TTTTGTTTGTGAATTGTAGG+TGG | + | tig0006806:21365-21384 | Msa1344290:intron | 30.0% |
! | GTTTTTGCAGCTTCAAATTA+AGG | + | tig0006806:21428-21447 | Msa1344290:CDS | 30.0% |
TGATAGCATAGCAATTAAAG+AGG | + | tig0006806:21662-21681 | Msa1344290:intron | 30.0% | |
CAGTATGATTCATATTAGCT+AGG | + | tig0006806:22092-22111 | Msa1344290:intron | 30.0% | |
! | TTTTCTTGTCTTCTTCTGTT+GGG | - | tig0006806:22222-22241 | None:intergenic | 30.0% |
! | ATTTTCTTGTCTTCTTCTGT+TGG | - | tig0006806:22223-22242 | None:intergenic | 30.0% |
ACAAGTCATGTTTACAGATT+AGG | + | tig0006806:22306-22325 | Msa1344290:intron | 30.0% | |
! | TTTTACAAACTTTGACACAC+TGG | - | tig0006806:22411-22430 | None:intergenic | 30.0% |
! | AAGCATTGTGACATTATGAT+TGG | - | tig0006806:22484-22503 | None:intergenic | 30.0% |
! | GAAACATAGTGCAATTTTAC+TGG | - | tig0006806:22594-22613 | None:intergenic | 30.0% |
! | AAGCGACAAGTATTGTAAAA+CGG | - | tig0006806:22663-22682 | None:intergenic | 30.0% |
!! | AATTCAAGGTGTTTTGGATA+CGG | - | tig0006806:23361-23380 | None:intergenic | 30.0% |
TACGATCACATATTAAAGCT+CGG | - | tig0006806:23391-23410 | None:intergenic | 30.0% | |
GAGAGAACCTATTAAGAAAT+AGG | + | tig0006806:23432-23451 | Msa1344290:intron | 30.0% | |
! | ATGCTTGCCTATTTCTTAAT+AGG | - | tig0006806:23442-23461 | None:intergenic | 30.0% |
CAATAGAAGATTGGAGAAAT+TGG | + | tig0006806:24037-24056 | Msa1344290:intron | 30.0% | |
TGACATGATTATGAAACAGT+TGG | - | tig0006806:24228-24247 | None:intergenic | 30.0% | |
AATGGCAAAAATGAATACAC+GGG | + | tig0006806:24268-24287 | Msa1344290:intron | 30.0% | |
! | AAATATTTTATAAGCCGGCA+GGG | - | tig0006806:24345-24364 | None:intergenic | 30.0% |
AAATTGTCAGTTATGAAGCA+CGG | + | tig0006806:24555-24574 | Msa1344290:intron | 30.0% | |
TGTTAACAAAACAGGATCTT+AGG | + | tig0006806:24832-24851 | Msa1344290:intron | 30.0% | |
!!! | AATAGAAGGGCTTTAGTTTT+AGG | - | tig0006806:24998-25017 | None:intergenic | 30.0% |
TTGTGTGAAATGGAATAGAA+GGG | - | tig0006806:25011-25030 | None:intergenic | 30.0% | |
ACTTGAATAGTATGATATGG+TGG | - | tig0006806:25037-25056 | None:intergenic | 30.0% | |
!! | TGCGTTTATTTCTAAATAGG+GGG | + | tig0006806:25110-25129 | Msa1344290:intron | 30.0% |
GTGGTCCTCTAAATTATATT+TGG | + | tig0006806:25507-25526 | Msa1344290:intron | 30.0% | |
AACTCTTGCCAATTATGAAA+TGG | + | tig0006806:25566-25585 | Msa1344290:intron | 30.0% | |
ACTCTTGCCAATTATGAAAT+GGG | + | tig0006806:25567-25586 | Msa1344290:intron | 30.0% | |
CCATTCTTCAGAAATCAATT+GGG | - | tig0006806:25767-25786 | None:intergenic | 30.0% | |
! | CCAATTGATTTCTGAAGAAT+GGG | + | tig0006806:25765-25784 | Msa1344290:intron | 30.0% |
AAACACATAAAATCAGCATG+TGG | - | tig0006806:25889-25908 | None:intergenic | 30.0% | |
! | ATTTTATGTGTTTCTCCCAA+GGG | + | tig0006806:25896-25915 | Msa1344290:CDS | 30.0% |
!!! | ACTGTCCATGTTTTTTTGTT+TGG | + | tig0006806:26014-26033 | Msa1344290:intron | 30.0% |
TGCTAACAATGAAATGATGA+TGG | + | tig0006806:26149-26168 | Msa1344290:CDS | 30.0% | |
CAGAAAACATTAGGAATGTT+AGG | + | tig0006806:26336-26355 | Msa1344290:CDS | 30.0% | |
!!! | TTTTCACATGTTGACTCAAT+TGG | + | tig0006806:26428-26447 | Msa1344290:CDS | 30.0% |
TGTAGAAATGTCATTCAAAG+GGG | - | tig0006806:26569-26588 | None:intergenic | 30.0% | |
CTAAATATGTCTCTCATGAA+AGG | + | tig0006806:26864-26883 | Msa1344290:intron | 30.0% | |
! | GTTTTTGCAGCTTCAAATTA+AGG | + | tig0006806:21428-21447 | Msa1344290:CDS | 30.0% |
TTCATTCCATTGTAAGCAAT+TGG | - | tig0006806:27252-27271 | None:intergenic | 30.0% | |
GAAACCCTGCAAAAAGATTT+AGG | + | tig0006806:15612-15631 | Msa1344290:intron | 35.0% | |
! | TGCTCCTAAATCTTTTTGCA+GGG | - | tig0006806:15619-15638 | None:intergenic | 35.0% |
! | ATGCTCCTAAATCTTTTTGC+AGG | - | tig0006806:15620-15639 | None:intergenic | 35.0% |
! | AAGATTTAGGAGCATACTAG+AGG | + | tig0006806:15625-15644 | Msa1344290:intron | 35.0% |
TTCTACAAAAAAGCAACGGT+CGG | + | tig0006806:15777-15796 | Msa1344290:intron | 35.0% | |
AAAAGCCCCTAACAATTACT+TGG | + | tig0006806:15954-15973 | Msa1344290:intron | 35.0% | |
AAAGCCCCTAACAATTACTT+GGG | + | tig0006806:15955-15974 | Msa1344290:intron | 35.0% | |
CATAGAAGAGAATGAACACA+AGG | - | tig0006806:15998-16017 | None:intergenic | 35.0% | |
ATCTTCTTCTATCCAAGTTG+GGG | - | tig0006806:16065-16084 | None:intergenic | 35.0% | |
GAAATCTGCTATCTGATCTT+TGG | + | tig0006806:16116-16135 | Msa1344290:intron | 35.0% | |
AGAAACAACTCACTATTTCC+AGG | - | tig0006806:16341-16360 | None:intergenic | 35.0% | |
!! | GGAAATAGTGAGTTGTTTCT+TGG | + | tig0006806:16341-16360 | Msa1344290:intron | 35.0% |
GTTCATCTCTTCAACTCAAA+GGG | - | tig0006806:16461-16480 | None:intergenic | 35.0% | |
AGTTCATCTCTTCAACTCAA+AGG | - | tig0006806:16462-16481 | None:intergenic | 35.0% | |
AGTTGAAGAGATGAACTTCT+GGG | + | tig0006806:16465-16484 | Msa1344290:intron | 35.0% | |
CTTAAAGGTTGTCATGGTAA+AGG | - | tig0006806:16501-16520 | None:intergenic | 35.0% | |
CTTTACCATGACAACCTTTA+AGG | + | tig0006806:16499-16518 | Msa1344290:intron | 35.0% | |
AGATACCTTAAAGGTTGTCA+TGG | - | tig0006806:16507-16526 | None:intergenic | 35.0% | |
CTTCTATAAGCTGAAATGTC+AGG | + | tig0006806:16651-16670 | Msa1344290:intron | 35.0% | |
CTTGATCTCTTAGAAGATTC+AGG | - | tig0006806:16753-16772 | None:intergenic | 35.0% | |
! | CTGAATCTTCTAAGAGATCA+AGG | + | tig0006806:16751-16770 | Msa1344290:intron | 35.0% |
! | GGCCAACTGAAATATCTTTT+GGG | - | tig0006806:16831-16850 | None:intergenic | 35.0% |
! | TGGCCAACTGAAATATCTTT+TGG | - | tig0006806:16832-16851 | None:intergenic | 35.0% |
GTCTTTATATGGTCTCAAAC+AGG | - | tig0006806:17071-17090 | None:intergenic | 35.0% | |
GTGAGTTTGCAAACTTGATT+GGG | + | tig0006806:17094-17113 | Msa1344290:intron | 35.0% | |
ATGTAAATGCCAGTGATTGA+TGG | + | tig0006806:17204-17223 | Msa1344290:intron | 35.0% | |
AAAGGATACAACCAGATTGA+AGG | - | tig0006806:17295-17314 | None:intergenic | 35.0% | |
TTCAATCTGGTTGTATCCTT+TGG | + | tig0006806:17294-17313 | Msa1344290:intron | 35.0% | |
AGAGAGATACAAAGCAAGAT+TGG | - | tig0006806:17323-17342 | None:intergenic | 35.0% | |
TCTTGCTTTGTATCTCTCTA+TGG | + | tig0006806:17324-17343 | Msa1344290:intron | 35.0% | |
ATTACTGCTCTTGAACAAAC+TGG | - | tig0006806:17436-17455 | None:intergenic | 35.0% | |
AGGCCATTAAACATGATTGT+TGG | - | tig0006806:17480-17499 | None:intergenic | 35.0% | |
GGATATGGACAAAGAAAACA+AGG | + | tig0006806:17528-17547 | Msa1344290:intron | 35.0% | |
! | CCACTCAATTTTCTTCCAAT+TGG | - | tig0006806:17795-17814 | None:intergenic | 35.0% |
CCAATTGGAAGAAAATTGAG+TGG | + | tig0006806:17792-17811 | Msa1344290:intron | 35.0% | |
AGGTGAAATGTAAGGCAAAA+TGG | + | tig0006806:17816-17835 | Msa1344290:intron | 35.0% | |
GGATACAAGTCAGGATTTAA+AGG | - | tig0006806:17907-17926 | None:intergenic | 35.0% | |
GAGACAACCAAAAACTTTGA+AGG | + | tig0006806:17996-18015 | Msa1344290:intron | 35.0% | |
AACAAAATGGTAGAGTTGAG+AGG | - | tig0006806:18200-18219 | None:intergenic | 35.0% | |
! | TCAACTCTACCATTTTGTTG+AGG | + | tig0006806:18201-18220 | Msa1344290:intron | 35.0% |
GTTGAAACTCCTCAACAAAA+TGG | - | tig0006806:18213-18232 | None:intergenic | 35.0% | |
AGGCATAAAATGCAGACAAA+AGG | + | tig0006806:18262-18281 | Msa1344290:intron | 35.0% | |
AATGCAGACAAAAGGAATTC+AGG | + | tig0006806:18270-18289 | Msa1344290:intron | 35.0% | |
AAAATCATCAGGTCAGACAA+TGG | - | tig0006806:18297-18316 | None:intergenic | 35.0% | |
! | TTGTCTGACCTGATGATTTT+AGG | + | tig0006806:18297-18316 | Msa1344290:intron | 35.0% |
! | TGTCTGACCTGATGATTTTA+GGG | + | tig0006806:18298-18317 | Msa1344290:intron | 35.0% |
ATGTTACCCCTAAAATCATC+AGG | - | tig0006806:18308-18327 | None:intergenic | 35.0% | |
AAAATGCCTATGACCATGTA+TGG | + | tig0006806:18440-18459 | Msa1344290:intron | 35.0% | |
AAGTTTCCATACATGGTCAT+AGG | - | tig0006806:18449-18468 | None:intergenic | 35.0% | |
AAAGTGACAAATGTCACAAG+TGG | + | tig0006806:18563-18582 | Msa1344290:intron | 35.0% | |
ACATGATGTATGTACCATAC+AGG | - | tig0006806:18865-18884 | None:intergenic | 35.0% | |
TAGCATAAGTCATAAGCTGA+AGG | + | tig0006806:18895-18914 | Msa1344290:intron | 35.0% | |
TGAGTGAAGTAATGATCTAG+AGG | + | tig0006806:19073-19092 | Msa1344290:intron | 35.0% | |
AGAAAGAACATGATTGGTGT+TGG | + | tig0006806:19214-19233 | Msa1344290:intron | 35.0% | |
TTGGCTGAAGTAGTATTTGA+TGG | + | tig0006806:19233-19252 | Msa1344290:intron | 35.0% | |
!! | AAGTAGTATTTGATGGTGGA+GGG | + | tig0006806:19240-19259 | Msa1344290:intron | 35.0% |
TCTTCAACTATCTCTCAAAC+TGG | - | tig0006806:19323-19342 | None:intergenic | 35.0% | |
! | GTGATTTGTCTTATGGCAAA+AGG | + | tig0006806:19457-19476 | Msa1344290:intron | 35.0% |
! | ATGGCAAAAGGTGCAATATT+TGG | + | tig0006806:19469-19488 | Msa1344290:intron | 35.0% |
!! | TCTGAAGCAAGAAAACCTTT+TGG | - | tig0006806:19539-19558 | None:intergenic | 35.0% |
!! | AGTATACTCTCTTGTTGTTC+AGG | - | tig0006806:19630-19649 | None:intergenic | 35.0% |
! | ACTTTGTTGATAGAAGGAAG+AGG | + | tig0006806:19647-19666 | Msa1344290:intron | 35.0% |
! | ATCTGCTCGTAATTTTCGTT+TGG | - | tig0006806:19750-19769 | None:intergenic | 35.0% |
GCTATCAACAACTTGAAACA+AGG | - | tig0006806:19890-19909 | None:intergenic | 35.0% | |
GTAACTACTTGATTCACTCT+TGG | - | tig0006806:20042-20061 | None:intergenic | 35.0% | |
CTACGGTTCAAATCATCAAT+AGG | + | tig0006806:20076-20095 | Msa1344290:intron | 35.0% | |
TGGAATAGATCCATCAATGA+AGG | + | tig0006806:20105-20124 | Msa1344290:intron | 35.0% | |
AACAAGCTTTCCTTCATTGA+TGG | - | tig0006806:20118-20137 | None:intergenic | 35.0% | |
TAGTTAGAACCATCAAGAAG+AGG | + | tig0006806:20181-20200 | Msa1344290:intron | 35.0% | |
TTAGTTACACCTCTTCTTGA+TGG | - | tig0006806:20193-20212 | None:intergenic | 35.0% | |
TAGTATGGAGAATTTGTGTC+TGG | + | tig0006806:20244-20263 | Msa1344290:intron | 35.0% | |
AAAAGCCCCTAACAATTACT+TGG | + | tig0006806:15954-15973 | Msa1344290:intron | 35.0% | |
AAAGCCCCTAACAATTACTT+GGG | + | tig0006806:15955-15974 | Msa1344290:intron | 35.0% | |
TGCATCCCAAGTAATTGTTA+GGG | - | tig0006806:20718-20737 | None:intergenic | 35.0% | |
TTGCATCCCAAGTAATTGTT+AGG | - | tig0006806:20719-20738 | None:intergenic | 35.0% | |
CAGAAAATATGAGGAATGTC+GGG | + | tig0006806:20835-20854 | Msa1344290:intron | 35.0% | |
! | TCTTTTGGGCTTAGAATTGA+AGG | - | tig0006806:20978-20997 | None:intergenic | 35.0% |
TGCCAATTAAACCACTGTAT+TGG | + | tig0006806:21133-21152 | Msa1344290:intron | 35.0% | |
GCTGCAAAAACTTCACATAT+TGG | - | tig0006806:21419-21438 | None:intergenic | 35.0% | |
TATGCTCCAATTGCTTACAA+CGG | + | tig0006806:21572-21591 | Msa1344290:intron | 35.0% | |
TTCATTCCGTTGTAAGCAAT+TGG | - | tig0006806:21581-21600 | None:intergenic | 35.0% | |
TAGCATAGCAATTAAAGAGG+AGG | + | tig0006806:21665-21684 | Msa1344290:intron | 35.0% | |
CTTCTGTTGGGTTAAGTTAA+GGG | - | tig0006806:22210-22229 | None:intergenic | 35.0% | |
TCTTCTGTTGGGTTAAGTTA+AGG | - | tig0006806:22211-22230 | None:intergenic | 35.0% | |
!!! | TGACTTGTTGAGCTTTTGAT+TGG | - | tig0006806:22294-22313 | None:intergenic | 35.0% |
TGTAAAATTGGGATAGCACT+TGG | + | tig0006806:22424-22443 | Msa1344290:intron | 35.0% | |
GTAAAATTGGGATAGCACTT+GGG | + | tig0006806:22425-22444 | Msa1344290:intron | 35.0% | |
! | AAGCATTGTGACATTGTGAT+TGG | + | tig0006806:22523-22542 | Msa1344290:intron | 35.0% |
! | AATTTTACTGGGTAGCACTT+GGG | - | tig0006806:22582-22601 | None:intergenic | 35.0% |
TTCACAAGACACAACAAGTT+CGG | + | tig0006806:22611-22630 | Msa1344290:intron | 35.0% | |
!!! | TACAATACTTGTCGCTTTTG+AGG | + | tig0006806:22666-22685 | Msa1344290:intron | 35.0% |
AAGCGACATGTATTGTGAAA+CGG | + | tig0006806:22896-22915 | Msa1344290:intron | 35.0% | |
TCCAAAACACCTTGAATTAG+AGG | + | tig0006806:23363-23382 | Msa1344290:intron | 35.0% | |
!! | ACCTCTAATTCAAGGTGTTT+TGG | - | tig0006806:23367-23386 | None:intergenic | 35.0% |
TGCAATAAACACTTGTCTGT+CGG | - | tig0006806:23770-23789 | None:intergenic | 35.0% | |
ACAGACAAGTGTTTATTGCA+TGG | + | tig0006806:23770-23789 | Msa1344290:intron | 35.0% | |
CACTGCTCTTGTATTTAACA+TGG | + | tig0006806:23907-23926 | Msa1344290:intron | 35.0% | |
TACCTCTTGCAATAGAAGAT+TGG | + | tig0006806:24028-24047 | Msa1344290:intron | 35.0% | |
TCTCATTGTTCAGATGAGAA+TGG | - | tig0006806:24068-24087 | None:intergenic | 35.0% | |
GATTATGAAACAGTTGGCAT+TGG | - | tig0006806:24222-24241 | None:intergenic | 35.0% | |
! | AATATTTTATAAGCCGGCAG+GGG | - | tig0006806:24344-24363 | None:intergenic | 35.0% |
! | CAAATATTTTATAAGCCGGC+AGG | - | tig0006806:24346-24365 | None:intergenic | 35.0% |
!! | CTGCCGGCTTATAAAATATT+TGG | + | tig0006806:24344-24363 | Msa1344290:intron | 35.0% |
! | GAAGAAAAGTGTGACCTAAA+TGG | + | tig0006806:24480-24499 | Msa1344290:intron | 35.0% |
CTAAATAAAGCCGTATACCA+AGG | + | tig0006806:24515-24534 | Msa1344290:intron | 35.0% | |
CTTCGATATACCTTGGTATA+CGG | - | tig0006806:24528-24547 | None:intergenic | 35.0% | |
AACTTTGCTTCGATATACCT+TGG | - | tig0006806:24535-24554 | None:intergenic | 35.0% | |
ACACAACATATGTCTGACAT+TGG | + | tig0006806:24692-24711 | Msa1344290:intron | 35.0% | |
CACAACATATGTCTGACATT+GGG | + | tig0006806:24693-24712 | Msa1344290:intron | 35.0% | |
AAATAAAGCACAGCACTCTT+CGG | - | tig0006806:24730-24749 | None:intergenic | 35.0% | |
AAGCCAATAGTAACAGTAAC+TGG | + | tig0006806:24774-24793 | Msa1344290:intron | 35.0% | |
AGGATTTCAAACTGCTTAGT+TGG | + | tig0006806:24870-24889 | Msa1344290:intron | 35.0% | |
GACAATGACGTTATTGTTGT+TGG | - | tig0006806:24914-24933 | None:intergenic | 35.0% | |
GTTGTGTGAAATGGAATAGA+AGG | - | tig0006806:25012-25031 | None:intergenic | 35.0% | |
TGAATAGTATGATATGGTGG+TGG | - | tig0006806:25034-25053 | None:intergenic | 35.0% | |
AATTAGAGTGATGTGAGACT+TGG | - | tig0006806:25073-25092 | None:intergenic | 35.0% | |
! | GATTGTCTAATTGTGTTGCT+CGG | - | tig0006806:25222-25241 | None:intergenic | 35.0% |
CATATCATGACATTGAGATG+TGG | + | tig0006806:25488-25507 | Msa1344290:intron | 35.0% | |
! | ATGTGAATCCAATCCCATTT+TGG | + | tig0006806:25602-25621 | Msa1344290:intron | 35.0% |
ACTGAAGGTAATGCCAAAAT+GGG | - | tig0006806:25618-25637 | None:intergenic | 35.0% | |
AACTGAAGGTAATGCCAAAA+TGG | - | tig0006806:25619-25638 | None:intergenic | 35.0% | |
! | AGAGTACTCTCATTTCTCAT+AGG | + | tig0006806:25704-25723 | Msa1344290:intron | 35.0% |
! | CCCAATTGATTTCTGAAGAA+TGG | + | tig0006806:25764-25783 | Msa1344290:intron | 35.0% |
CCCATTCTTCAGAAATCAAT+TGG | - | tig0006806:25768-25787 | None:intergenic | 35.0% | |
TTCATGAATCAGTTCCTTAG+TGG | + | tig0006806:25826-25845 | Msa1344290:CDS | 35.0% | |
! | GATTTTATGTGTTTCTCCCA+AGG | + | tig0006806:25895-25914 | Msa1344290:CDS | 35.0% |
AGAGGATAGAAGCAAAAACA+TGG | + | tig0006806:26191-26210 | Msa1344290:CDS | 35.0% | |
AGAACCCTGCAAAAAGATTT+AGG | + | tig0006806:26214-26233 | Msa1344290:CDS | 35.0% | |
! | AGCTCCTAAATCTTTTTGCA+GGG | - | tig0006806:26221-26240 | None:intergenic | 35.0% |
AAGATTTAGGAGCTCAATAG+AGG | + | tig0006806:26227-26246 | Msa1344290:CDS | 35.0% | |
! | TTGCTCATAGAAGCAGATTT+TGG | - | tig0006806:26368-26387 | None:intergenic | 35.0% |
TTCTATGAGCAACAATGAAG+AGG | + | tig0006806:26376-26395 | Msa1344290:CDS | 35.0% | |
ACAATGAAGAGGACTTAATG+TGG | + | tig0006806:26387-26406 | Msa1344290:CDS | 35.0% | |
! | CTTGATTTTCTACCCAACTT+AGG | - | tig0006806:26494-26513 | None:intergenic | 35.0% |
AGTGTCACAAGTGTTTATGT+CGG | + | tig0006806:26784-26803 | Msa1344290:intron | 35.0% | |
AGATATTAGCACTATGCTTG+AGG | + | tig0006806:27053-27072 | Msa1344290:CDS | 35.0% | |
GCTGCAAAAACTTCACATAT+TGG | - | tig0006806:21419-21438 | None:intergenic | 35.0% | |
!! | TTCTAAGCTCTGAAGATATG+TGG | + | tig0006806:27217-27236 | Msa1344290:CDS | 35.0% |
TATGCTCCAATTGCTTACAA+TGG | + | tig0006806:21572-21591 | Msa1344290:intron | 35.0% | |
GCTTACAATGGAATGAACAT+TGG | + | tig0006806:27255-27274 | Msa1344290:CDS | 35.0% | |
TGCAGCCCAAGTAATTGTTA+GGG | - | tig0006806:15963-15982 | None:intergenic | 40.0% | |
TTGCAGCCCAAGTAATTGTT+AGG | - | tig0006806:15964-15983 | None:intergenic | 40.0% | |
TTTAATATCCCCCCACAAGT+TGG | + | tig0006806:16018-16037 | Msa1344290:intron | 40.0% | |
TTTACCAACCTCCAACTTGT+GGG | - | tig0006806:16032-16051 | None:intergenic | 40.0% | |
ATTTACCAACCTCCAACTTG+TGG | - | tig0006806:16033-16052 | None:intergenic | 40.0% | |
! | GCAATTTTTCCCTGACTATG+TGG | + | tig0006806:16172-16191 | Msa1344290:intron | 40.0% |
GATTGATTGCCACATAGTCA+GGG | - | tig0006806:16184-16203 | None:intergenic | 40.0% | |
AGATTGATTGCCACATAGTC+AGG | - | tig0006806:16185-16204 | None:intergenic | 40.0% | |
GCAATCAATCTCCAGATGTT+TGG | + | tig0006806:16194-16213 | Msa1344290:intron | 40.0% | |
AGCACTCTGGTTATCACAAT+AGG | + | tig0006806:16254-16273 | Msa1344290:intron | 40.0% | |
TTCTCTGTATTCAGCTTCTG+AGG | + | tig0006806:16311-16330 | Msa1344290:intron | 40.0% | |
GAAGAAACAATGGCCAGATA+TGG | + | tig0006806:16392-16411 | Msa1344290:intron | 40.0% | |
GAGTTGAAGAGATGAACTTC+TGG | + | tig0006806:16464-16483 | Msa1344290:intron | 40.0% | |
GCTGAAATGTCAGGAAATGA+AGG | + | tig0006806:16660-16679 | Msa1344290:intron | 40.0% | |
ATTAGAAGGATCAGATGGAG+TGG | + | tig0006806:16704-16723 | Msa1344290:intron | 40.0% | |
GAGGTTGCTCATTCAAAGTT+TGG | - | tig0006806:16804-16823 | None:intergenic | 40.0% | |
! | ACTGAAATATCTTTTGGGCC+TGG | - | tig0006806:16826-16845 | None:intergenic | 40.0% |
GGCCCAAAAGATATTTCAGT+TGG | + | tig0006806:16826-16845 | Msa1344290:intron | 40.0% | |
CCAGTAAGATAGTGAGAGAT+CGG | + | tig0006806:16946-16965 | Msa1344290:intron | 40.0% | |
AGATAGTGAGAGATCGGAAT+TGG | + | tig0006806:16952-16971 | Msa1344290:intron | 40.0% | |
TCTCTCCAATGGTTACAAAC+AGG | - | tig0006806:17011-17030 | None:intergenic | 40.0% | |
ACTACTCTTCTTCTCTCCAA+TGG | - | tig0006806:17022-17041 | None:intergenic | 40.0% | |
CTTCTCATACCACTTTCTAC+TGG | + | tig0006806:17045-17064 | Msa1344290:intron | 40.0% | |
GGTGAGTTTGCAAACTTGAT+TGG | + | tig0006806:17093-17112 | Msa1344290:intron | 40.0% | |
GTTTACATGACAATACCTCC+TGG | - | tig0006806:17136-17155 | None:intergenic | 40.0% | |
GTAAACAATGCATTCCTGCA+TGG | - | tig0006806:17175-17194 | None:intergenic | 40.0% | |
GAATCTGACTGTAGTGAGTT+TGG | + | tig0006806:17243-17262 | Msa1344290:intron | 40.0% | |
ATACAACCAGATTGAAGGAC+TGG | - | tig0006806:17290-17309 | None:intergenic | 40.0% | |
GAGATACAAAGCAAGATTGG+TGG | - | tig0006806:17320-17339 | None:intergenic | 40.0% | |
CTCTTGAACAAACTGGTACT+TGG | - | tig0006806:17429-17448 | None:intergenic | 40.0% | |
ATGTTTAATGGCCTCAGTGT+AGG | + | tig0006806:17486-17505 | Msa1344290:intron | 40.0% | |
TGAACCTAAAACCTACACTG+AGG | - | tig0006806:17500-17519 | None:intergenic | 40.0% | |
! | GTTCTAGTGGAGGTTCTAAT+AGG | + | tig0006806:17679-17698 | Msa1344290:intron | 40.0% |
GAAACAGGTTCATCAGCAAA+AGG | + | tig0006806:17739-17758 | Msa1344290:intron | 40.0% | |
TTGGAAGAAAATTGAGTGGG+AGG | + | tig0006806:17796-17815 | Msa1344290:intron | 40.0% | |
! | AGGCAAAATGGACTCATGAA+AGG | + | tig0006806:17828-17847 | Msa1344290:intron | 40.0% |
! | GTTTTCTTGGGATACAAGTC+AGG | - | tig0006806:17916-17935 | None:intergenic | 40.0% |
!! | TCTAGCTCTAGATTGCAACT+TGG | + | tig0006806:17942-17961 | Msa1344290:intron | 40.0% |
CTCATGGCATCATTCATCAA+AGG | - | tig0006806:18242-18261 | None:intergenic | 40.0% | |
TTGATGAATGATGCCATGAG+AGG | + | tig0006806:18242-18261 | Msa1344290:intron | 40.0% | |
! | TCTGCATTTTATGCCTCTCA+TGG | - | tig0006806:18258-18277 | None:intergenic | 40.0% |
! | GTCTGACCTGATGATTTTAG+GGG | + | tig0006806:18299-18318 | Msa1344290:intron | 40.0% |
!! | ATGTGAAGGTACTTCAGACT+TGG | + | tig0006806:18365-18384 | Msa1344290:intron | 40.0% |
! | CATCTGAGACAGTCTTTGAT+TGG | + | tig0006806:18623-18642 | Msa1344290:intron | 40.0% |
!! | TCACAGAGGATGATTGGTTT+GGG | - | tig0006806:18834-18853 | None:intergenic | 40.0% |
! | ATCACAGAGGATGATTGGTT+TGG | - | tig0006806:18835-18854 | None:intergenic | 40.0% |
GTGAAATCACAGAGGATGAT+TGG | - | tig0006806:18840-18859 | None:intergenic | 40.0% | |
TACAGGATGTGAAATCACAG+AGG | - | tig0006806:18848-18867 | None:intergenic | 40.0% | |
CTGTGATTTCACATCCTGTA+TGG | + | tig0006806:18848-18867 | Msa1344290:intron | 40.0% | |
TGCATGTTAAATCACCCTAC+TGG | - | tig0006806:19133-19152 | None:intergenic | 40.0% | |
GTAGGGTGATTTAACATGCA+AGG | + | tig0006806:19133-19152 | Msa1344290:intron | 40.0% | |
TGATTTAACATGCAAGGAGC+AGG | + | tig0006806:19139-19158 | Msa1344290:intron | 40.0% | |
GCATTAGCAGAAGATGAAAC+AGG | + | tig0006806:19188-19207 | Msa1344290:intron | 40.0% | |
AGGTGCAGAAAGAACATGAT+TGG | + | tig0006806:19208-19227 | Msa1344290:intron | 40.0% | |
GCTGAAGTAGTATTTGATGG+TGG | + | tig0006806:19236-19255 | Msa1344290:intron | 40.0% | |
!! | GAAGTAGTATTTGATGGTGG+AGG | + | tig0006806:19239-19258 | Msa1344290:intron | 40.0% |
!! | AGTAGTATTTGATGGTGGAG+GGG | + | tig0006806:19241-19260 | Msa1344290:intron | 40.0% |
!! | AATTCACAAGGTGTTGCTGT+AGG | - | tig0006806:19347-19366 | None:intergenic | 40.0% |
ACAGCAACACCTTGTGAATT+AGG | + | tig0006806:19347-19366 | Msa1344290:intron | 40.0% | |
GAGGTTGTTCCTAATTCACA+AGG | - | tig0006806:19359-19378 | None:intergenic | 40.0% | |
TACTCATGCTGTGAATTCAG+AGG | - | tig0006806:19378-19397 | None:intergenic | 40.0% | |
GAATTCACAGCATGAGTAGA+AGG | + | tig0006806:19380-19399 | Msa1344290:intron | 40.0% | |
GAGTTCCCTTGTTAGCATTA+GGG | + | tig0006806:19402-19421 | Msa1344290:intron | 40.0% | |
GGTTTCCCTAATGCTAACAA+GGG | - | tig0006806:19410-19429 | None:intergenic | 40.0% | |
TGGTTTCCCTAATGCTAACA+AGG | - | tig0006806:19411-19430 | None:intergenic | 40.0% | |
GGAGGATAAGAACCAGAATT+AGG | + | tig0006806:19503-19522 | Msa1344290:intron | 40.0% | |
! | TGCTCGTAATTTTCGTTTGG+AGG | - | tig0006806:19747-19766 | None:intergenic | 40.0% |
CTCATAGATTCACAACGACA+TGG | + | tig0006806:19770-19789 | Msa1344290:intron | 40.0% | |
! | CACTGAGTTGAAGTCTCTTT+GGG | - | tig0006806:19843-19862 | None:intergenic | 40.0% |
! | TCACTGAGTTGAAGTCTCTT+TGG | - | tig0006806:19844-19863 | None:intergenic | 40.0% |
GCTTCAAGAACGTTTCTCTA+AGG | - | tig0006806:19945-19964 | None:intergenic | 40.0% | |
AAGCTCTATCCACACATCAA+TGG | + | tig0006806:19961-19980 | Msa1344290:intron | 40.0% | |
ATGAATACGCCATTGATGTG+TGG | - | tig0006806:19973-19992 | None:intergenic | 40.0% | |
ACACATCAATGGCGTATTCA+TGG | + | tig0006806:19972-19991 | Msa1344290:intron | 40.0% | |
TGATTTGAACCGTAGTGCTT+GGG | - | tig0006806:20071-20090 | None:intergenic | 40.0% | |
ATGATTTGAACCGTAGTGCT+TGG | - | tig0006806:20072-20091 | None:intergenic | 40.0% | |
CGGTTCAAATCATCAATAGG+AGG | + | tig0006806:20079-20098 | Msa1344290:intron | 40.0% | |
! | ACAGAGCTTGGATTTTCACT+AGG | + | tig0006806:20214-20233 | Msa1344290:intron | 40.0% |
TCACTAGGATGCACATAGTA+TGG | + | tig0006806:20229-20248 | Msa1344290:intron | 40.0% | |
AGCTTGAGCTTGAACATCAA+TGG | + | tig0006806:20490-20509 | Msa1344290:intron | 40.0% | |
TTGAGCTTGAACATCAATGG+CGG | + | tig0006806:20493-20512 | Msa1344290:intron | 40.0% | |
TTACTCTCTCTCTTCTTGAG+AGG | - | tig0006806:20546-20565 | None:intergenic | 40.0% | |
GCATCCCAAGTAATTGTTAG+GGG | - | tig0006806:20717-20736 | None:intergenic | 40.0% | |
! | TGGCTCATAGAAGCAGATTT+TGG | - | tig0006806:20867-20886 | None:intergenic | 40.0% |
TTCTATGAGCCACAATGAAG+AGG | + | tig0006806:20875-20894 | Msa1344290:CDS | 40.0% | |
TCTATGAGCCACAATGAAGA+GGG | + | tig0006806:20876-20895 | Msa1344290:CDS | 40.0% | |
ACCTGTGAAAAGCAGTTGTT+GGG | - | tig0006806:20918-20937 | None:intergenic | 40.0% | |
AACCTGTGAAAAGCAGTTGT+TGG | - | tig0006806:20919-20938 | None:intergenic | 40.0% | |
GGTTAACTCTAATCCTTCTC+TGG | + | tig0006806:20935-20954 | Msa1344290:CDS | 40.0% | |
!! | AATCCTTCTCTGGAGCAAAA+TGG | + | tig0006806:20945-20964 | Msa1344290:CDS | 40.0% |
!! | TAGGTGCTTCAGGTTCTTTT+GGG | - | tig0006806:20992-21011 | None:intergenic | 40.0% |
!! | TTAGGTGCTTCAGGTTCTTT+TGG | - | tig0006806:20993-21012 | None:intergenic | 40.0% |
CTACATAACTTAGGTGCTTC+AGG | - | tig0006806:21002-21021 | None:intergenic | 40.0% | |
TGTAGAAAATCAAAGGCAGG+AGG | + | tig0006806:21017-21036 | Msa1344290:CDS | 40.0% | |
!!! | TTTCCTCTTGTTTTGTGCAG+AGG | + | tig0006806:21201-21220 | Msa1344290:intron | 40.0% |
TTGCAAACTCTTGTCCCAAA+TGG | + | tig0006806:21257-21276 | Msa1344290:CDS | 40.0% | |
TCTTGTCCCAAATGGAACTA+AGG | + | tig0006806:21265-21284 | Msa1344290:CDS | 40.0% | |
AAGCCACCTTAGTTCCATTT+GGG | - | tig0006806:21274-21293 | None:intergenic | 40.0% | |
AAAGCCACCTTAGTTCCATT+TGG | - | tig0006806:21275-21294 | None:intergenic | 40.0% | |
!!! | TTTTGAGCTCTGAAGACATG+TGG | + | tig0006806:21546-21565 | Msa1344290:intron | 40.0% |
GCTTACAACGGAATGAACAT+TGG | + | tig0006806:21584-21603 | Msa1344290:intron | 40.0% | |
TTGTTGGAGAAGAAAAGCTG+AGG | - | tig0006806:21616-21635 | None:intergenic | 40.0% | |
!!! | CAATCTGTTTTGACTTCCTG+TGG | + | tig0006806:21948-21967 | Msa1344290:intron | 40.0% |
!! | GGAACTGCTTTAAAATCCAC+AGG | - | tig0006806:21967-21986 | None:intergenic | 40.0% |
TAGCTTCTTGTTCCAGTTGA+TGG | + | tig0006806:22176-22195 | Msa1344290:intron | 40.0% | |
GTAGGTCATTTAACTCGCAT+AGG | - | tig0006806:22340-22359 | None:intergenic | 40.0% | |
! | CAATTTTACTGGGTAGCACT+TGG | - | tig0006806:22583-22602 | None:intergenic | 40.0% |
GACATGTATTGTGAAACGGA+GGG | + | tig0006806:22900-22919 | Msa1344290:intron | 40.0% | |
CTTAATAGGTTCTCTCTGCA+AGG | - | tig0006806:23428-23447 | None:intergenic | 40.0% | |
GCAATAAACACTTGTCTGTC+GGG | - | tig0006806:23769-23788 | None:intergenic | 40.0% | |
GTTTGCATGAGACGCTTTAA+TGG | - | tig0006806:23985-24004 | None:intergenic | 40.0% | |
CTCCAATCTTCTATTGCAAG+AGG | - | tig0006806:24033-24052 | None:intergenic | 40.0% | |
TCACGTGGCCATTAAAAGAA+AGG | - | tig0006806:24147-24166 | None:intergenic | 40.0% | |
CGTCCAGTTACTGTTACTAT+TGG | - | tig0006806:24780-24799 | None:intergenic | 40.0% | |
TTAGGCTGAATGAGCTTGAT+AGG | + | tig0006806:24850-24869 | Msa1344290:intron | 40.0% | |
!!! | AAGGGCTTTAGTTTTAGGCA+TGG | - | tig0006806:24993-25012 | None:intergenic | 40.0% |
AGGTAATGCCAAAATGGGAT+TGG | - | tig0006806:25613-25632 | None:intergenic | 40.0% | |
TGGCATTACCTTCAGTTGTT+AGG | + | tig0006806:25622-25641 | Msa1344290:intron | 40.0% | |
TCTTCAGAAATCAATTGGGC+AGG | - | tig0006806:25763-25782 | None:intergenic | 40.0% | |
GAAGAATGGGAATCTCTTAG+TGG | + | tig0006806:25778-25797 | Msa1344290:intron | 40.0% | |
TCAGCATGTGGAAAGTAAGA+TGG | - | tig0006806:25877-25896 | None:intergenic | 40.0% | |
ACTTGTAGTGGTGGTAGAAA+AGG | - | tig0006806:25953-25972 | None:intergenic | 40.0% | |
TGGAACCTACTCATGTGATT+TGG | + | tig0006806:25975-25994 | Msa1344290:intron | 40.0% | |
TGTTGCCAAATCACATGAGT+AGG | - | tig0006806:25983-26002 | None:intergenic | 40.0% | |
! | ATGTTTAGAGCCAGTGAAAC+TGG | + | tig0006806:26119-26138 | Msa1344290:CDS | 40.0% |
TTCTGAACCTTCTTCAGAAG+AGG | + | tig0006806:26173-26192 | Msa1344290:CDS | 40.0% | |
! | CTTCTATCCTCTTCTGAAGA+AGG | - | tig0006806:26183-26202 | None:intergenic | 40.0% |
! | GAGCTCCTAAATCTTTTTGC+AGG | - | tig0006806:26222-26241 | None:intergenic | 40.0% |
TGCAGGTCTCAGAAAACATT+AGG | + | tig0006806:26327-26346 | Msa1344290:intron | 40.0% | |
!! | TCACATGTTGACTCAATTGG+AGG | + | tig0006806:26431-26450 | Msa1344290:CDS | 40.0% |
! | TAGGTGCCTCATGTTCTTTT+GGG | - | tig0006806:26475-26494 | None:intergenic | 40.0% |
! | TTAGGTGCCTCATGTTCTTT+TGG | - | tig0006806:26476-26495 | None:intergenic | 40.0% |
ATAAATGCTCTGTGCATCAG+TGG | - | tig0006806:21051-21070 | None:intergenic | 40.0% | |
! | CTTAGTTCCATTTGGGACAA+GGG | - | tig0006806:21267-21286 | None:intergenic | 40.0% |
TTGTTGGAGAAGAAAAGCTG+AGG | - | tig0006806:21616-21635 | None:intergenic | 40.0% | |
GCAGCCCAAGTAATTGTTAG+GGG | - | tig0006806:15962-15981 | None:intergenic | 45.0% | |
TTACCAACCTCCAACTTGTG+GGG | - | tig0006806:16031-16050 | None:intergenic | 45.0% | |
AATGTTGAGCAACCCCAACT+TGG | + | tig0006806:16050-16069 | Msa1344290:intron | 45.0% | |
AGGTTGAGGAAGCAGTGATT+TGG | + | tig0006806:16089-16108 | Msa1344290:intron | 45.0% | |
CTGCAATGTAGATAGCACTC+TGG | + | tig0006806:16241-16260 | Msa1344290:intron | 45.0% | |
! | TCTGGCCATTGTTTCTTCCT+TGG | - | tig0006806:16390-16409 | None:intergenic | 45.0% |
GACACTAGAAGGTCCATATC+TGG | - | tig0006806:16408-16427 | None:intergenic | 45.0% | |
ACTTTGAATGAGCAACCTCC+AGG | + | tig0006806:16805-16824 | Msa1344290:intron | 45.0% | |
! | GAAATATCTTTTGGGCCTGG+AGG | - | tig0006806:16823-16842 | None:intergenic | 45.0% |
!! | GTTGATGATGTGATCTTGGC+TGG | - | tig0006806:16921-16940 | None:intergenic | 45.0% |
CCGATCTCTCACTATCTTAC+TGG | - | tig0006806:16949-16968 | None:intergenic | 45.0% | |
AGCTGCCTGTTTGTAACCAT+TGG | + | tig0006806:17003-17022 | Msa1344290:intron | 45.0% | |
TCAAACAGGCCAGTAGAAAG+TGG | - | tig0006806:17057-17076 | None:intergenic | 45.0% | |
ATTCCTGCATGGAGAGTTAC+AGG | - | tig0006806:17164-17183 | None:intergenic | 45.0% | |
CCTTAGCTTCCATCAATCAC+TGG | - | tig0006806:17216-17235 | None:intergenic | 45.0% | |
CCAGTGATTGATGGAAGCTA+AGG | + | tig0006806:17213-17232 | Msa1344290:intron | 45.0% | |
ACTGTAGTGAGTTTGGCTAC+AGG | + | tig0006806:17250-17269 | Msa1344290:intron | 45.0% | |
TGTAGTCCAGTCCTTCAATC+TGG | + | tig0006806:17281-17300 | Msa1344290:intron | 45.0% | |
! | AAAGCAAGATTGGTGGCCAA+AGG | - | tig0006806:17313-17332 | None:intergenic | 45.0% |
AAGATCCATCTGCACCCTAT+GGG | + | tig0006806:17373-17392 | Msa1344290:intron | 45.0% | |
! | ATGGCCTCAGTGTAGGTTTT+AGG | + | tig0006806:17493-17512 | Msa1344290:intron | 45.0% |
!!! | GGTTTTAGGTTCAGTGTGAG+TGG | + | tig0006806:17507-17526 | Msa1344290:intron | 45.0% |
AGGTTCAGTGTGAGTGGATA+TGG | + | tig0006806:17513-17532 | Msa1344290:intron | 45.0% | |
! | CTAGTGGAGGTTCTAATAGG+TGG | + | tig0006806:17682-17701 | Msa1344290:intron | 45.0% |
! | TGGAGGTTCTAATAGGTGGA+GGG | + | tig0006806:17686-17705 | Msa1344290:intron | 45.0% |
GTTCTAATAGGTGGAGGGTT+AGG | + | tig0006806:17691-17710 | Msa1344290:intron | 45.0% | |
TGAGTGGGAGGTGAAATGTA+AGG | + | tig0006806:17808-17827 | Msa1344290:intron | 45.0% | |
GCACTGTGGCACTTTAGATT+GGG | - | tig0006806:18657-18676 | None:intergenic | 45.0% | |
AGCACTGTGGCACTTTAGAT+TGG | - | tig0006806:18658-18677 | None:intergenic | 45.0% | |
ATGTACCTTCTTCAGCACTG+TGG | - | tig0006806:18671-18690 | None:intergenic | 45.0% | |
GAATCAGAGAGTGAAGTAGC+AGG | + | tig0006806:18774-18793 | Msa1344290:intron | 45.0% | |
GTTTGGGTGAACTCTGTGAT+GGG | - | tig0006806:18818-18837 | None:intergenic | 45.0% | |
ACCTGAGTCTATAAGCCAGT+AGG | + | tig0006806:19115-19134 | Msa1344290:intron | 45.0% | |
CCTGAGTCTATAAGCCAGTA+GGG | + | tig0006806:19116-19135 | Msa1344290:intron | 45.0% | |
TCTTCTGCTAATGCTTCTGC+AGG | - | tig0006806:19182-19201 | None:intergenic | 45.0% | |
GGAGTTCCCTTGTTAGCATT+AGG | + | tig0006806:19401-19420 | Msa1344290:intron | 45.0% | |
TTAGGTTTGCCACGTCCAAA+AGG | + | tig0006806:19521-19540 | Msa1344290:intron | 45.0% | |
! | GCAAGAAAACCTTTTGGACG+TGG | - | tig0006806:19533-19552 | None:intergenic | 45.0% |
ACAACGACATGGATGAAGAC+AGG | + | tig0006806:19781-19800 | Msa1344290:intron | 45.0% | |
TACAGCAATCCCAAGCACTA+CGG | + | tig0006806:20059-20078 | Msa1344290:intron | 45.0% | |
CGTTCTATGAAGCGTGCTTT+AGG | - | tig0006806:20148-20167 | None:intergenic | 45.0% | |
!! | ATGGTTCTAACTACCTCGCT+TGG | - | tig0006806:20174-20193 | None:intergenic | 45.0% |
GGTGTAACTAACACAGAGCT+TGG | + | tig0006806:20202-20221 | Msa1344290:intron | 45.0% | |
GGAGAATTTGTGTCTGGTTG+AGG | + | tig0006806:20250-20269 | Msa1344290:intron | 45.0% | |
CCTGTGAAAAGCAGTTGTTG+GGG | - | tig0006806:20917-20936 | None:intergenic | 45.0% | |
AGAAAATCAAAGGCAGGAGG+TGG | + | tig0006806:21020-21039 | Msa1344290:CDS | 45.0% | |
CAAGAGTAAGTCCCCTTTGA+AGG | + | tig0006806:21072-21091 | Msa1344290:intron | 45.0% | |
TCTCCTCTGCACAAAACAAG+AGG | - | tig0006806:21207-21226 | None:intergenic | 45.0% | |
TGTCCCAAATGGAACTAAGG+TGG | + | tig0006806:21268-21287 | Msa1344290:intron | 45.0% | |
GGATATCAGTACCATGCTTG+AGG | + | tig0006806:21386-21405 | Msa1344290:CDS | 45.0% | |
AAGGCAATGCAAGTCAACGA+AGG | - | tig0006806:22143-22162 | None:intergenic | 45.0% | |
!! | TCGTTGACTTGCATTGCCTT+CGG | + | tig0006806:22143-22162 | Msa1344290:intron | 45.0% |
AAGCTAAACCTCCTAACCGA+AGG | - | tig0006806:22162-22181 | None:intergenic | 45.0% | |
TGGGTTAAGTTAAGGGTGGT+TGG | - | tig0006806:22203-22222 | None:intergenic | 45.0% | |
CTGTTGGGTTAAGTTAAGGG+TGG | - | tig0006806:22207-22226 | None:intergenic | 45.0% | |
CACTTGGGTGACATAGAGTT+GGG | + | tig0006806:22440-22459 | Msa1344290:intron | 45.0% | |
GACATAGAGTTGGGTGACAT+TGG | + | tig0006806:22449-22468 | Msa1344290:intron | 45.0% | |
! | TTGGGTGACATTGGTGACAT+TGG | - | tig0006806:22458-22477 | None:intergenic | 45.0% |
GACATAGAGTTGGGTGACAT+TGG | - | tig0006806:22449-22468 | None:intergenic | 45.0% | |
CACTTGGGTGACATAGAGTT+GGG | - | tig0006806:22440-22459 | None:intergenic | 45.0% | |
CGACATGTATTGTGAAACGG+AGG | + | tig0006806:22899-22918 | Msa1344290:intron | 45.0% | |
AGCTCGGTACCTCTAATTCA+AGG | - | tig0006806:23375-23394 | None:intergenic | 45.0% | |
GAAATAGGCAAGCATGTGCA+AGG | + | tig0006806:23447-23466 | Msa1344290:intron | 45.0% | |
TGGAGATGTGGCTGGAAAAT+AGG | - | tig0006806:23810-23829 | None:intergenic | 45.0% | |
TATTTGCCACGATGGAGATG+TGG | - | tig0006806:23822-23841 | None:intergenic | 45.0% | |
CAATGCACTATTTGCCACGA+TGG | - | tig0006806:23830-23849 | None:intergenic | 45.0% | |
CATCGTGGCAAATAGTGCAT+TGG | + | tig0006806:23828-23847 | Msa1344290:intron | 45.0% | |
TCAGTTATGAAGCACGGACA+CGG | + | tig0006806:24561-24580 | Msa1344290:intron | 45.0% | |
CACGGACACGGACATAAATA+TGG | + | tig0006806:24573-24592 | Msa1344290:intron | 45.0% | |
TAACTGGACGCACATAATCC+TGG | + | tig0006806:24790-24809 | Msa1344290:intron | 45.0% | |
!!! | GGCTTTAGTTTTAGGCATGG+TGG | - | tig0006806:24990-25009 | None:intergenic | 45.0% |
!! | ATGGTGGTGGTTGTGTGAAA+TGG | - | tig0006806:25021-25040 | None:intergenic | 45.0% |
! | TGTCTAATTGTGTTGCTCGG+TGG | - | tig0006806:25219-25238 | None:intergenic | 45.0% |
! | AGTACTTGTGCTACTCCCTT+GGG | - | tig0006806:25914-25933 | None:intergenic | 45.0% |
TCTACCACCACTACAAGTAG+TGG | + | tig0006806:25955-25974 | Msa1344290:intron | 45.0% | |
GTAGGTTCCACTACTTGTAG+TGG | - | tig0006806:25965-25984 | None:intergenic | 45.0% | |
GAAGAGGACTTAATGTGGCA+TGG | + | tig0006806:26392-26411 | Msa1344290:CDS | 45.0% | |
TCTGAGCCCAAAAGAACATG+AGG | + | tig0006806:26466-26485 | Msa1344290:CDS | 45.0% | |
! | AGAACATGAGGCACCTAAGT+TGG | + | tig0006806:26478-26497 | Msa1344290:CDS | 45.0% |
! | GAACATGAGGCACCTAAGTT+GGG | + | tig0006806:26479-26498 | Msa1344290:CDS | 45.0% |
TTGCAAACCCTTGTCCCAAA+TGG | + | tig0006806:26945-26964 | Msa1344290:CDS | 45.0% | |
! | CCTTAGTTCCATTTGGGACA+AGG | - | tig0006806:21268-21287 | None:intergenic | 45.0% |
CCTTGTCCCAAATGGAACTA+AGG | + | tig0006806:26953-26972 | Msa1344290:CDS | 45.0% | |
! | AATATCCCCCCACAAGTTGG+AGG | + | tig0006806:16021-16040 | Msa1344290:intron | 50.0% |
TACCAACCTCCAACTTGTGG+GGG | - | tig0006806:16030-16049 | None:intergenic | 50.0% | |
CCATGAACGCACCAAACATC+TGG | - | tig0006806:16208-16227 | None:intergenic | 50.0% | |
!! | CCAGATGTTTGGTGCGTTCA+TGG | + | tig0006806:16205-16224 | Msa1344290:intron | 50.0% |
TTGGTGCGTTCATGGAAGAC+TGG | + | tig0006806:16213-16232 | Msa1344290:intron | 50.0% | |
GCGTTCATGGAAGACTGGAT+TGG | + | tig0006806:16218-16237 | Msa1344290:intron | 50.0% | |
! | TTCAGCTTCTGAGGATGACC+TGG | + | tig0006806:16320-16339 | Msa1344290:intron | 50.0% |
! | AGGGTACACTGATGCTGACT+GGG | - | tig0006806:16442-16461 | None:intergenic | 50.0% |
! | AAGGGTACACTGATGCTGAC+TGG | - | tig0006806:16443-16462 | None:intergenic | 50.0% |
GGATCAGATGGAGTGGAAAG+TGG | + | tig0006806:16711-16730 | Msa1344290:intron | 50.0% | |
CTTCCTGTAACTCTCCATGC+AGG | + | tig0006806:17158-17177 | Msa1344290:intron | 50.0% | |
GAAGATCCATCTGCACCCTA+TGG | + | tig0006806:17372-17391 | Msa1344290:intron | 50.0% | |
TCAAACCCATAGGGTGCAGA+TGG | - | tig0006806:17381-17400 | None:intergenic | 50.0% | |
CTCCAGCAGTCAAACCCATA+GGG | - | tig0006806:17390-17409 | None:intergenic | 50.0% | |
! | GTGGAGGTTCTAATAGGTGG+AGG | + | tig0006806:17685-17704 | Msa1344290:intron | 50.0% |
CTAATAGGTGGAGGGTTAGG+AGG | + | tig0006806:17694-17713 | Msa1344290:intron | 50.0% | |
! | GGTTCATCAGCAAAAGGTGC+TGG | + | tig0006806:17745-17764 | Msa1344290:intron | 50.0% |
!! | TCAGCAAAAGGTGCTGGAGT+TGG | + | tig0006806:17751-17770 | Msa1344290:intron | 50.0% |
GGTTCTGTGAGCTTGAAGTG+TGG | + | tig0006806:17963-17982 | Msa1344290:intron | 50.0% | |
! | AAGTGCCACAGTGCTGAAGA+AGG | + | tig0006806:18663-18682 | Msa1344290:intron | 50.0% |
GGTTTGGGTGAACTCTGTGA+TGG | - | tig0006806:18819-18838 | None:intergenic | 50.0% | |
!! | CCCTACTGGCTTATAGACTC+AGG | - | tig0006806:19119-19138 | None:intergenic | 50.0% |
!! | TATTTGATGGTGGAGGGGTG+AGG | + | tig0006806:19246-19265 | Msa1344290:intron | 50.0% |
!! | ATTTGATGGTGGAGGGGTGA+GGG | + | tig0006806:19247-19266 | Msa1344290:intron | 50.0% |
GGACGTGGCAAACCTAATTC+TGG | - | tig0006806:19518-19537 | None:intergenic | 50.0% | |
GGATGAAGACAGGTGCACAT+AGG | + | tig0006806:19791-19810 | Msa1344290:intron | 50.0% | |
AGACAGGTGCACATAGGCAT+AGG | + | tig0006806:19797-19816 | Msa1344290:intron | 50.0% | |
TCATAGAACGATGCCAAGCG+AGG | + | tig0006806:20158-20177 | Msa1344290:intron | 50.0% | |
GTGTCTGGTTGAGGAGCAAT+TGG | + | tig0006806:20259-20278 | Msa1344290:intron | 50.0% | |
ACGTTAGGCCCTCTTCATTG+TGG | - | tig0006806:20887-20906 | None:intergenic | 50.0% | |
ACAATGAAGAGGGCCTAACG+TGG | + | tig0006806:20886-20905 | Msa1344290:CDS | 50.0% | |
!! | CCCCAACAACTGCTTTTCAC+AGG | + | tig0006806:20914-20933 | Msa1344290:CDS | 50.0% |
! | CCTCCATTTTGCTCCAGAGA+AGG | - | tig0006806:20951-20970 | None:intergenic | 50.0% |
!! | CCTTCTCTGGAGCAAAATGG+AGG | + | tig0006806:20948-20967 | Msa1344290:CDS | 50.0% |
ATGCTCTGTGCATCAGTGAC+AGG | - | tig0006806:21047-21066 | None:intergenic | 50.0% | |
TTGGACAGCTTCCTCAAGCA+TGG | - | tig0006806:21400-21419 | None:intergenic | 50.0% | |
GACTTGCATTGCCTTCGGTT+AGG | + | tig0006806:22148-22167 | Msa1344290:intron | 50.0% | |
TTGCATTGCCTTCGGTTAGG+AGG | + | tig0006806:22151-22170 | Msa1344290:intron | 50.0% | |
GCACTTGGGTGACATAGAGT+TGG | + | tig0006806:22439-22458 | Msa1344290:intron | 50.0% | |
GCACTTGGGTGACATAGAGT+TGG | - | tig0006806:22439-22458 | None:intergenic | 50.0% | |
AGCACAGCACTCTTCGGATT+AGG | - | tig0006806:24724-24743 | None:intergenic | 50.0% | |
! | TAGTGGACAGTACACAGCTG+AGG | + | tig0006806:25795-25814 | Msa1344290:intron | 50.0% |
! | CAGTACTTGTGCTACTCCCT+TGG | - | tig0006806:25915-25934 | None:intergenic | 50.0% |
GGTTCCACTACTTGTAGTGG+TGG | - | tig0006806:25962-25981 | None:intergenic | 50.0% | |
GCAGCAAGAACCAGTTTCAC+TGG | - | tig0006806:26132-26151 | None:intergenic | 50.0% | |
AATGCTCTGTGCATCAGTGG+CGG | - | tig0006806:26531-26550 | None:intergenic | 50.0% | |
ACCAACCTCCAACTTGTGGG+GGG | - | tig0006806:16029-16048 | None:intergenic | 55.0% | |
GGTAAGCCACTGCAGTTCAC+AGG | + | tig0006806:16275-16294 | Msa1344290:intron | 55.0% | |
CTGCTTCCTGTGAACTGCAG+TGG | - | tig0006806:16284-16303 | None:intergenic | 55.0% | |
CTGGCTGCAGAGACACTAGA+AGG | - | tig0006806:16419-16438 | None:intergenic | 55.0% | |
! | TACACTGATGCTGACTGGGC+TGG | - | tig0006806:16438-16457 | None:intergenic | 55.0% |
GGATGAGAGTGAGAGACACC+AGG | + | tig0006806:17115-17134 | Msa1344290:intron | 55.0% | |
TGAGAGTGAGAGACACCAGG+AGG | + | tig0006806:17118-17137 | Msa1344290:intron | 55.0% | |
CACCCTATGGGTTTGACTGC+TGG | + | tig0006806:17385-17404 | Msa1344290:intron | 55.0% | |
CCTCCAGCAGTCAAACCCAT+AGG | - | tig0006806:17391-17410 | None:intergenic | 55.0% | |
CCTATGGGTTTGACTGCTGG+AGG | + | tig0006806:17388-17407 | Msa1344290:intron | 55.0% | |
GAGGGGTGAGGGATGATTGT+TGG | + | tig0006806:19258-19277 | Msa1344290:intron | 55.0% | |
! | GGAGCAATTGGTGCTTGACG+AGG | + | tig0006806:20271-20290 | Msa1344290:intron | 55.0% |
! | GCAATTGGTGCTTGACGAGG+AGG | + | tig0006806:20274-20293 | Msa1344290:intron | 55.0% |
! | AGGGTGGTTGGTCCATCAAC+TGG | - | tig0006806:22191-22210 | None:intergenic | 55.0% |
TTCCAGCCACATCTCCATCG+TGG | + | tig0006806:23813-23832 | Msa1344290:intron | 55.0% | |
ATGCTCTGTGCATCAGTGGC+GGG | - | tig0006806:26530-26549 | None:intergenic | 55.0% | |
! | TCCCCCCACAAGTTGGAGGT+TGG | + | tig0006806:16025-16044 | Msa1344290:intron | 60.0% |
GAAGAGGGCCTAACGTGGCA+TGG | + | tig0006806:20891-20910 | Msa1344290:CDS | 60.0% | |
TGTTGGGGCCATGCCACGTT+AGG | - | tig0006806:20902-20921 | None:intergenic | 60.0% | |
TGCCACGATGGAGATGTGGC+TGG | - | tig0006806:23818-23837 | None:intergenic | 60.0% | |
TTCCAAAGTCGTGCCCCTGC+CGG | + | tig0006806:24328-24347 | Msa1344290:intron | 60.0% | |
! | GGCAGGGGCACGACTTTGGA+AGG | - | tig0006806:24329-24348 | None:intergenic | 65.0% |
! | AGCCGGCAGGGGCACGACTT+TGG | - | tig0006806:24333-24352 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0006806 | gene | 15566 | 27311 | 15566 | ID=Msa1344290;Name=Msa1344290 |
tig0006806 | mRNA | 15566 | 27311 | 15566 | ID=Msa1344290-mRNA-1;Parent=Msa1344290;Name=Msa1344290-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|0|0|1|0.66|0.7|10|0|401 |
tig0006806 | exon | 15566 | 15569 | 15566 | ID=Msa1344290-mRNA-1:exon:4469;Parent=Msa1344290-mRNA-1 |
tig0006806 | exon | 20838 | 21076 | 20838 | ID=Msa1344290-mRNA-1:exon:4470;Parent=Msa1344290-mRNA-1 |
tig0006806 | exon | 21221 | 21286 | 21221 | ID=Msa1344290-mRNA-1:exon:4471;Parent=Msa1344290-mRNA-1 |
tig0006806 | exon | 21384 | 21449 | 21384 | ID=Msa1344290-mRNA-1:exon:4472;Parent=Msa1344290-mRNA-1 |
tig0006806 | exon | 25805 | 25970 | 25805 | ID=Msa1344290-mRNA-1:exon:4473;Parent=Msa1344290-mRNA-1 |
tig0006806 | exon | 26040 | 26248 | 26040 | ID=Msa1344290-mRNA-1:exon:4474;Parent=Msa1344290-mRNA-1 |
tig0006806 | exon | 26332 | 26559 | 26332 | ID=Msa1344290-mRNA-1:exon:4475;Parent=Msa1344290-mRNA-1 |
tig0006806 | exon | 26909 | 26974 | 26909 | ID=Msa1344290-mRNA-1:exon:4476;Parent=Msa1344290-mRNA-1 |
tig0006806 | exon | 27051 | 27116 | 27051 | ID=Msa1344290-mRNA-1:exon:4477;Parent=Msa1344290-mRNA-1 |
tig0006806 | exon | 27216 | 27311 | 27216 | ID=Msa1344290-mRNA-1:exon:4478;Parent=Msa1344290-mRNA-1 |
tig0006806 | CDS | 15566 | 15569 | 15566 | ID=Msa1344290-mRNA-1:cds;Parent=Msa1344290-mRNA-1 |
tig0006806 | CDS | 20838 | 21076 | 20838 | ID=Msa1344290-mRNA-1:cds;Parent=Msa1344290-mRNA-1 |
tig0006806 | CDS | 21221 | 21286 | 21221 | ID=Msa1344290-mRNA-1:cds;Parent=Msa1344290-mRNA-1 |
tig0006806 | CDS | 21384 | 21449 | 21384 | ID=Msa1344290-mRNA-1:cds;Parent=Msa1344290-mRNA-1 |
tig0006806 | CDS | 25805 | 25970 | 25805 | ID=Msa1344290-mRNA-1:cds;Parent=Msa1344290-mRNA-1 |
tig0006806 | CDS | 26040 | 26248 | 26040 | ID=Msa1344290-mRNA-1:cds;Parent=Msa1344290-mRNA-1 |
tig0006806 | CDS | 26332 | 26559 | 26332 | ID=Msa1344290-mRNA-1:cds;Parent=Msa1344290-mRNA-1 |
tig0006806 | CDS | 26909 | 26974 | 26909 | ID=Msa1344290-mRNA-1:cds;Parent=Msa1344290-mRNA-1 |
tig0006806 | CDS | 27051 | 27116 | 27051 | ID=Msa1344290-mRNA-1:cds;Parent=Msa1344290-mRNA-1 |
tig0006806 | CDS | 27216 | 27311 | 27216 | ID=Msa1344290-mRNA-1:cds;Parent=Msa1344290-mRNA-1 |
Gene Sequence |
Protein sequence |