Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1346820 | AES92029.1 | 71.503 | 193 | 18 | 2 | 29 | 184 | 31 | 223 | 4.08e-90 | 273 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1346820 | G7JQ00 | 71.503 | 193 | 18 | 2 | 29 | 184 | 31 | 223 | 1.95e-90 | 273 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1346820 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1346820 | MtrunA17_Chr5g0393501 | 29.744 | 195 | 97 | 5 | 29 | 183 | 45 | 239 | 1.89e-19 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 50 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATTTGCGATTTCCAATT+TGG | 0.147900 | tig0009232:+24854 | Msa1346820:CDS |
| GGGTAAGGGGTTTGCGATTT+GGG | 0.160938 | tig0009232:+24812 | Msa1346820:CDS |
| TCTCCTCCTCTTCCCCAAAT+TGG | 0.218227 | tig0009232:-24868 | None:intergenic |
| TGGGTAAGGGGTTTGCGATT+TGG | 0.259010 | tig0009232:+24811 | Msa1346820:CDS |
| TTGAAGTTCCTATCTGGATA+TGG | 0.289906 | tig0009232:+26860 | Msa1346820:intron |
| AGATTTGCGATTTCCAATTT+GGG | 0.327058 | tig0009232:+24855 | Msa1346820:CDS |
| CAAATTGGAAATCGCAAATC+TGG | 0.332402 | tig0009232:-24853 | None:intergenic |
| GTACCTTTGAAGTTCCTATC+TGG | 0.333773 | tig0009232:+26854 | Msa1346820:intron |
| AGGAATTTGCCGAAAGTATC+AGG | 0.335653 | tig0009232:-27008 | None:intergenic |
| AATCGTGATGTTTCACTCTA+AGG | 0.341127 | tig0009232:-27028 | None:intergenic |
| ATCTATTTCCACCAAGGTAC+TGG | 0.392804 | tig0009232:-26747 | None:intergenic |
| TAGGAACTACCTGATACTTT+CGG | 0.400617 | tig0009232:+26999 | Msa1346820:intron |
| TCCGAACATCACATTTGGTA+TGG | 0.417548 | tig0009232:-27114 | None:intergenic |
| CGATTTCCAATTTGGGGAAG+AGG | 0.437138 | tig0009232:+24862 | Msa1346820:CDS |
| GGGTTTGCGATTTGGGGAAG+AGG | 0.446038 | tig0009232:+24819 | Msa1346820:CDS |
| CCGAACATCACATTTGGTAT+GGG | 0.451435 | tig0009232:-27113 | None:intergenic |
| GAGCAATGGCACTTGCTAGA+TGG | 0.455163 | tig0009232:+26607 | Msa1346820:CDS |
| TTGTGCTGCCAATGGTATTG+AGG | 0.463000 | tig0009232:+27154 | Msa1346820:CDS |
| TATGTTCCAGAATTTGGGTA+AGG | 0.469282 | tig0009232:+24797 | None:intergenic |
| CCAAATGTGATGTTCGGAAA+AGG | 0.475440 | tig0009232:+27119 | Msa1346820:CDS |
| TAAATATTTGTACGAGCTAC+CGG | 0.476243 | tig0009232:+26585 | Msa1346820:CDS |
| CCCATACCAAATGTGATGTT+CGG | 0.477035 | tig0009232:+27113 | Msa1346820:CDS |
| TCGTCGATCCATATCCAGAT+AGG | 0.486078 | tig0009232:-26868 | None:intergenic |
| TTTGCGATTTGGGGAAGAGG+TGG | 0.493792 | tig0009232:+24822 | Msa1346820:CDS |
| TGTGCTGCCAATGGTATTGA+GGG | 0.501205 | tig0009232:+27155 | Msa1346820:CDS |
| ATTATTGCTTTCCAGTACCT+TGG | 0.503165 | tig0009232:+26736 | Msa1346820:CDS |
| TGTTCCAGAATTTGGGTAAG+GGG | 0.521801 | tig0009232:+24799 | None:intergenic |
| ACGGAAATGATATTGTCATA+AGG | 0.522697 | tig0009232:-27068 | None:intergenic |
| ATTGCTTTCCAGTACCTTGG+TGG | 0.525902 | tig0009232:+26739 | Msa1346820:CDS |
| GGTAAGGGGTTTGCGATTTG+GGG | 0.534352 | tig0009232:+24813 | Msa1346820:CDS |
| TCTAGCAAGTGCCATTGCTC+CGG | 0.534587 | tig0009232:-26604 | None:intergenic |
| GATTTGCGATTTCCAATTTG+GGG | 0.537951 | tig0009232:+24856 | Msa1346820:CDS |
| ATGTTCCAGAATTTGGGTAA+GGG | 0.545563 | tig0009232:+24798 | None:intergenic |
| AGTCAGCCGTTGTTGACAGA+TGG | 0.548377 | tig0009232:+26670 | Msa1346820:CDS |
| AGCCGTTGTTGACAGATGGT+TGG | 0.550734 | tig0009232:+26674 | Msa1346820:CDS |
| CGAACATCACATTTGGTATG+GGG | 0.552019 | tig0009232:-27112 | None:intergenic |
| TTTCAAGTGCAAGTGCGTCA+TGG | 0.567746 | tig0009232:+27193 | Msa1346820:CDS |
| TTTCCAATTTGGGGAAGAGG+AGG | 0.577832 | tig0009232:+24865 | Msa1346820:CDS |
| GTCTCCGCCCTCAATACCAT+TGG | 0.581950 | tig0009232:-27162 | None:intergenic |
| ATTTGGGGAAGAGGAGGAGA+AGG | 0.584196 | tig0009232:+24871 | Msa1346820:CDS |
| GTCTGTATATTTGAGTCTCA+CGG | 0.587084 | tig0009232:-27087 | None:intergenic |
| TGGCACTTGCTAGATGGTGA+TGG | 0.587936 | tig0009232:+26613 | Msa1346820:CDS |
| ATTTGGGGAAGAGGTGGAGA+AGG | 0.588798 | tig0009232:+24828 | Msa1346820:CDS |
| ATGTGATGTTCGGAAAAGGT+TGG | 0.606400 | tig0009232:+27123 | Msa1346820:CDS |
| GGCACTTGCTAGATGGTGAT+GGG | 0.608333 | tig0009232:+26614 | Msa1346820:CDS |
| TGTACGAGCTACCGGAGCAA+TGG | 0.612121 | tig0009232:+26593 | Msa1346820:CDS |
| TTTGAAATCTATTTCCACCA+AGG | 0.615617 | tig0009232:-26753 | None:intergenic |
| TGGATCGACGAAATCACCGA+AGG | 0.700849 | tig0009232:+26880 | Msa1346820:CDS |
| CTCCAACCATCTGTCAACAA+CGG | 0.713268 | tig0009232:-26676 | None:intergenic |
| GCTGCCAATGGTATTGAGGG+CGG | 0.739556 | tig0009232:+27158 | Msa1346820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATAATCTTTTTTTAGTTA+AGG | + | tig0009232:25127-25146 | Msa1346820:intron | 10.0% |
| !!! | AATAATCTTTTTTTAGTTAA+GGG | + | tig0009232:25128-25147 | Msa1346820:intron | 10.0% |
| !!! | AAATAATCTTTTTTTAGTTA+AGG | + | tig0009232:25127-25146 | Msa1346820:intron | 10.0% |
| !!! | AATAATCTTTTTTTAGTTAA+GGG | + | tig0009232:25128-25147 | Msa1346820:intron | 10.0% |
| !!! | AAAAAACTTAAATGTTCTTT+TGG | + | tig0009232:24946-24965 | Msa1346820:intron | 15.0% |
| !! | AAAATTCAAAAAAAACGTTA+GGG | - | tig0009232:25048-25067 | None:intergenic | 15.0% |
| !! | AAAAATTCAAAAAAAACGTT+AGG | - | tig0009232:25049-25068 | None:intergenic | 15.0% |
| !! | TAATACCAAAAATATAGTTA+AGG | + | tig0009232:25158-25177 | Msa1346820:intron | 15.0% |
| !! | AATACCAAAAATATAGTTAA+GGG | + | tig0009232:25159-25178 | Msa1346820:intron | 15.0% |
| !!! | TAAAATTCAATAATTTGTCT+AGG | + | tig0009232:25477-25496 | Msa1346820:intron | 15.0% |
| !!! | TATAGTTCTTTTTTTTTTTG+AGG | + | tig0009232:25554-25573 | Msa1346820:intron | 15.0% |
| !! | TATATATGCTATGAAAAATA+GGG | - | tig0009232:25731-25750 | None:intergenic | 15.0% |
| !! | ATATATATGCTATGAAAAAT+AGG | - | tig0009232:25732-25751 | None:intergenic | 15.0% |
| !! | GTTTATATATGCTATAATAA+AGG | + | tig0009232:26939-26958 | Msa1346820:intron | 15.0% |
| !!! | CAGATTTTTTTCTTTTTTTT+AGG | + | tig0009232:26980-26999 | Msa1346820:intron | 15.0% |
| !!! | AAAAAACTTAAATGTTCTTT+TGG | + | tig0009232:24946-24965 | Msa1346820:intron | 15.0% |
| !! | AAAATTCAAAAAAAACGTTA+GGG | - | tig0009232:25048-25067 | None:intergenic | 15.0% |
| !! | AAAAATTCAAAAAAAACGTT+AGG | - | tig0009232:25049-25068 | None:intergenic | 15.0% |
| !! | TAATACCAAAAATATAGTTA+AGG | + | tig0009232:25158-25177 | Msa1346820:intron | 15.0% |
| !! | AATACCAAAAATATAGTTAA+GGG | + | tig0009232:25159-25178 | Msa1346820:intron | 15.0% |
| !!! | TAAAATTCAATAATTTGTCT+AGG | + | tig0009232:25477-25496 | Msa1346820:intron | 15.0% |
| !!! | TATAGTTCTTTTTTTTTTTG+AGG | + | tig0009232:25554-25573 | Msa1346820:intron | 15.0% |
| !! | TATATATGCTATGAAAAATA+GGG | - | tig0009232:25731-25750 | None:intergenic | 15.0% |
| !! | ATATATATGCTATGAAAAAT+AGG | - | tig0009232:25732-25751 | None:intergenic | 15.0% |
| !! | GTTTATATATGCTATAATAA+AGG | + | tig0009232:26939-26958 | Msa1346820:intron | 15.0% |
| !!! | CAGATTTTTTTCTTTTTTTT+AGG | + | tig0009232:26980-26999 | Msa1346820:intron | 15.0% |
| !! | GATACCAAATAAATACTTAA+GGG | - | tig0009232:24973-24992 | None:intergenic | 20.0% |
| !!! | TTTTGAATTTATTTAACGGA+AGG | + | tig0009232:25067-25086 | Msa1346820:intron | 20.0% |
| !! | TTTGAATTTATTTAACGGAA+GGG | + | tig0009232:25068-25087 | Msa1346820:intron | 20.0% |
| !!! | CTATATTTTTGGTATTACTT+TGG | - | tig0009232:25155-25174 | None:intergenic | 20.0% |
| !! | TAATTACACTCATTCAATTT+AGG | - | tig0009232:25203-25222 | None:intergenic | 20.0% |
| !!! | TGATAATCAAAGCTATATTT+TGG | + | tig0009232:25283-25302 | Msa1346820:intron | 20.0% |
| !!! | ATATTTTGAAGTTTGTGAAA+AGG | + | tig0009232:25366-25385 | Msa1346820:intron | 20.0% |
| !!! | GACAAATTATTGAATTTTAG+TGG | - | tig0009232:25476-25495 | None:intergenic | 20.0% |
| !! | ATTCTAGTCATATAAATCAT+TGG | + | tig0009232:25822-25841 | Msa1346820:intron | 20.0% |
| !! | TTCTAGTCATATAAATCATT+GGG | + | tig0009232:25823-25842 | Msa1346820:intron | 20.0% |
| !!! | GCTTTTATAATAAAGGATAA+GGG | - | tig0009232:25868-25887 | None:intergenic | 20.0% |
| !!! | AGCTTTTATAATAAAGGATA+AGG | - | tig0009232:25869-25888 | None:intergenic | 20.0% |
| !!! | AAGTCTAGCTTTTATAATAA+AGG | - | tig0009232:25875-25894 | None:intergenic | 20.0% |
| !! | ATATCAAATGCAATTAAAGT+CGG | + | tig0009232:26083-26102 | Msa1346820:intron | 20.0% |
| !!! | GTAAAAAGAACACTTTTTTA+AGG | - | tig0009232:26211-26230 | None:intergenic | 20.0% |
| !! | TTAACTTTAGTGGTAAAATT+TGG | - | tig0009232:26330-26349 | None:intergenic | 20.0% |
| !! | TTTCTATTTAAATACGATGA+AGG | + | tig0009232:26411-26430 | Msa1346820:intron | 20.0% |
| !! | TTCTATTTAAATACGATGAA+GGG | + | tig0009232:26412-26431 | Msa1346820:intron | 20.0% |
| !! | TTAGACAGTGTATTAAAAAA+AGG | - | tig0009232:26527-26546 | None:intergenic | 20.0% |
| !! | AAAAAACAATAAACAACCTT+CGG | - | tig0009232:26899-26918 | None:intergenic | 20.0% |
| !!! | TTTTTATGCTATTCATTTAG+AGG | + | tig0009232:26917-26936 | Msa1346820:intron | 20.0% |
| !! | GATACCAAATAAATACTTAA+GGG | - | tig0009232:24973-24992 | None:intergenic | 20.0% |
| !!! | TTTTGAATTTATTTAACGGA+AGG | + | tig0009232:25067-25086 | Msa1346820:intron | 20.0% |
| !! | TTTGAATTTATTTAACGGAA+GGG | + | tig0009232:25068-25087 | Msa1346820:intron | 20.0% |
| !!! | CTATATTTTTGGTATTACTT+TGG | - | tig0009232:25155-25174 | None:intergenic | 20.0% |
| !! | TAATTACACTCATTCAATTT+AGG | - | tig0009232:25203-25222 | None:intergenic | 20.0% |
| !!! | TGATAATCAAAGCTATATTT+TGG | + | tig0009232:25283-25302 | Msa1346820:intron | 20.0% |
| !!! | ATATTTTGAAGTTTGTGAAA+AGG | + | tig0009232:25366-25385 | Msa1346820:intron | 20.0% |
| !!! | GACAAATTATTGAATTTTAG+TGG | - | tig0009232:25476-25495 | None:intergenic | 20.0% |
| !! | ATTCTAGTCATATAAATCAT+TGG | + | tig0009232:25822-25841 | Msa1346820:intron | 20.0% |
| !! | TTCTAGTCATATAAATCATT+GGG | + | tig0009232:25823-25842 | Msa1346820:intron | 20.0% |
| !!! | GCTTTTATAATAAAGGATAA+GGG | - | tig0009232:25868-25887 | None:intergenic | 20.0% |
| !!! | AGCTTTTATAATAAAGGATA+AGG | - | tig0009232:25869-25888 | None:intergenic | 20.0% |
| !!! | AAGTCTAGCTTTTATAATAA+AGG | - | tig0009232:25875-25894 | None:intergenic | 20.0% |
| !! | ATATCAAATGCAATTAAAGT+CGG | + | tig0009232:26083-26102 | Msa1346820:intron | 20.0% |
| !!! | GTAAAAAGAACACTTTTTTA+AGG | - | tig0009232:26211-26230 | None:intergenic | 20.0% |
| !! | TTAACTTTAGTGGTAAAATT+TGG | - | tig0009232:26330-26349 | None:intergenic | 20.0% |
| !! | TTTCTATTTAAATACGATGA+AGG | + | tig0009232:26411-26430 | Msa1346820:intron | 20.0% |
| !! | TTCTATTTAAATACGATGAA+GGG | + | tig0009232:26412-26431 | Msa1346820:intron | 20.0% |
| !! | TTAGACAGTGTATTAAAAAA+AGG | - | tig0009232:26527-26546 | None:intergenic | 20.0% |
| !! | AAAAAACAATAAACAACCTT+CGG | - | tig0009232:26899-26918 | None:intergenic | 20.0% |
| !!! | TTTTTATGCTATTCATTTAG+AGG | + | tig0009232:26917-26936 | Msa1346820:intron | 20.0% |
| ! | CGATACCAAATAAATACTTA+AGG | - | tig0009232:24974-24993 | None:intergenic | 25.0% |
| !! | GTATTTATTTGGTATCGTTT+TGG | + | tig0009232:24977-24996 | Msa1346820:intron | 25.0% |
| ! | TTGAATGAGTGTAATTATAG+AGG | + | tig0009232:25206-25225 | Msa1346820:intron | 25.0% |
| !! | AGCAAATATTAGTCTCATTA+GGG | - | tig0009232:25664-25683 | None:intergenic | 25.0% |
| ! | TAATATTTGCTCAAGTACTT+CGG | + | tig0009232:25673-25692 | Msa1346820:intron | 25.0% |
| ! | TCATATAAATCATTGGGAAT+AGG | + | tig0009232:25829-25848 | Msa1346820:intron | 25.0% |
| ! | TTAGTCATTAGTACATGTTT+AGG | - | tig0009232:25960-25979 | None:intergenic | 25.0% |
| ! | TTTGATTAGCAATTAGTGTA+GGG | - | tig0009232:26118-26137 | None:intergenic | 25.0% |
| !!! | TTTTGATTAGCAATTAGTGT+AGG | - | tig0009232:26119-26138 | None:intergenic | 25.0% |
| !! | ATGTGCATGAAAATAACTTT+TGG | + | tig0009232:26451-26470 | Msa1346820:intron | 25.0% |
| ! | CGATACCAAATAAATACTTA+AGG | - | tig0009232:24974-24993 | None:intergenic | 25.0% |
| !! | GTATTTATTTGGTATCGTTT+TGG | + | tig0009232:24977-24996 | Msa1346820:intron | 25.0% |
| ! | TTGAATGAGTGTAATTATAG+AGG | + | tig0009232:25206-25225 | Msa1346820:intron | 25.0% |
| !! | AGCAAATATTAGTCTCATTA+GGG | - | tig0009232:25664-25683 | None:intergenic | 25.0% |
| ! | TAATATTTGCTCAAGTACTT+CGG | + | tig0009232:25673-25692 | Msa1346820:intron | 25.0% |
| ! | TCATATAAATCATTGGGAAT+AGG | + | tig0009232:25829-25848 | Msa1346820:intron | 25.0% |
| ! | TTAGTCATTAGTACATGTTT+AGG | - | tig0009232:25960-25979 | None:intergenic | 25.0% |
| ! | TTTGATTAGCAATTAGTGTA+GGG | - | tig0009232:26118-26137 | None:intergenic | 25.0% |
| !!! | TTTTGATTAGCAATTAGTGT+AGG | - | tig0009232:26119-26138 | None:intergenic | 25.0% |
| !! | ATGTGCATGAAAATAACTTT+TGG | + | tig0009232:26451-26470 | Msa1346820:intron | 25.0% |
| AGATTTGCGATTTCCAATTT+GGG | + | tig0009232:24855-24874 | Msa1346820:CDS | 30.0% | |
| TGGTCCCTTAAGTATTTATT+TGG | + | tig0009232:24966-24985 | Msa1346820:intron | 30.0% | |
| ! | TGGTCCCTTAACTATATTTT+TGG | - | tig0009232:25166-25185 | None:intergenic | 30.0% |
| ! | TTTAGGCTTAAATGCGTTTT+TGG | - | tig0009232:25186-25205 | None:intergenic | 30.0% |
| ATTTCTCTTTCCTCTTACTT+CGG | - | tig0009232:25257-25276 | None:intergenic | 30.0% | |
| !!! | AGCTATATTTTGGTGCAAAA+TGG | + | tig0009232:25293-25312 | Msa1346820:intron | 30.0% |
| AGAAAATCTAGAGAGTCATA+GGG | - | tig0009232:25616-25635 | None:intergenic | 30.0% | |
| ! | AATATTAGTCTCATTAGGGA+GGG | - | tig0009232:25660-25679 | None:intergenic | 30.0% |
| ! | AAATATTAGTCTCATTAGGG+AGG | - | tig0009232:25661-25680 | None:intergenic | 30.0% |
| ! | GAGCAAATATTAGTCTCATT+AGG | - | tig0009232:25665-25684 | None:intergenic | 30.0% |
| TATGCTATGAAAAATAGGGA+TGG | - | tig0009232:25727-25746 | None:intergenic | 30.0% | |
| AATCATTGGGAATAGGAAAA+TGG | + | tig0009232:25836-25855 | Msa1346820:intron | 30.0% | |
| ! | TTATAAAAGCTAGACTTGCT+TGG | + | tig0009232:25878-25897 | Msa1346820:intron | 30.0% |
| TCATTAGTACATGTTTAGGA+GGG | - | tig0009232:25956-25975 | None:intergenic | 30.0% | |
| !! | ATTGTTAGGCTTTGAATCAA+CGG | - | tig0009232:26027-26046 | None:intergenic | 30.0% |
| !! | TATTATGAGAGAGCATTGTT+AGG | - | tig0009232:26041-26060 | None:intergenic | 30.0% |
| TTGATTAGCAATTAGTGTAG+GGG | - | tig0009232:26117-26136 | None:intergenic | 30.0% | |
| ATCTTCCTATCACTCTATTT+CGG | - | tig0009232:26283-26302 | None:intergenic | 30.0% | |
| ATAGGAAGATATGCGTTTAA+AGG | + | tig0009232:26293-26312 | Msa1346820:intron | 30.0% | |
| ! | GAACGAACATTTAACTTTAG+TGG | - | tig0009232:26340-26359 | None:intergenic | 30.0% |
| ! | GCATGAAAATAACTTTTGGT+TGG | + | tig0009232:26455-26474 | Msa1346820:intron | 30.0% |
| TAATACACTGTCTAACTTCT+TGG | + | tig0009232:26532-26551 | Msa1346820:intron | 30.0% | |
| TAAATATTTGTACGAGCTAC+CGG | + | tig0009232:26585-26604 | Msa1346820:CDS | 30.0% | |
| ! | TTTGAAATCTATTTCCACCA+AGG | - | tig0009232:26756-26775 | None:intergenic | 30.0% |
| ACGGAAATGATATTGTCATA+AGG | - | tig0009232:27071-27090 | None:intergenic | 30.0% | |
| AGATTTGCGATTTCCAATTT+GGG | + | tig0009232:24855-24874 | Msa1346820:CDS | 30.0% | |
| TGGTCCCTTAAGTATTTATT+TGG | + | tig0009232:24966-24985 | Msa1346820:intron | 30.0% | |
| ! | TGGTCCCTTAACTATATTTT+TGG | - | tig0009232:25166-25185 | None:intergenic | 30.0% |
| ! | TTTAGGCTTAAATGCGTTTT+TGG | - | tig0009232:25186-25205 | None:intergenic | 30.0% |
| ATTTCTCTTTCCTCTTACTT+CGG | - | tig0009232:25257-25276 | None:intergenic | 30.0% | |
| !!! | AGCTATATTTTGGTGCAAAA+TGG | + | tig0009232:25293-25312 | Msa1346820:intron | 30.0% |
| AGAAAATCTAGAGAGTCATA+GGG | - | tig0009232:25616-25635 | None:intergenic | 30.0% | |
| ! | AATATTAGTCTCATTAGGGA+GGG | - | tig0009232:25660-25679 | None:intergenic | 30.0% |
| ! | AAATATTAGTCTCATTAGGG+AGG | - | tig0009232:25661-25680 | None:intergenic | 30.0% |
| ! | GAGCAAATATTAGTCTCATT+AGG | - | tig0009232:25665-25684 | None:intergenic | 30.0% |
| TATGCTATGAAAAATAGGGA+TGG | - | tig0009232:25727-25746 | None:intergenic | 30.0% | |
| AATCATTGGGAATAGGAAAA+TGG | + | tig0009232:25836-25855 | Msa1346820:intron | 30.0% | |
| ! | TTATAAAAGCTAGACTTGCT+TGG | + | tig0009232:25878-25897 | Msa1346820:intron | 30.0% |
| TCATTAGTACATGTTTAGGA+GGG | - | tig0009232:25956-25975 | None:intergenic | 30.0% | |
| !! | ATTGTTAGGCTTTGAATCAA+CGG | - | tig0009232:26027-26046 | None:intergenic | 30.0% |
| !! | TATTATGAGAGAGCATTGTT+AGG | - | tig0009232:26041-26060 | None:intergenic | 30.0% |
| TTGATTAGCAATTAGTGTAG+GGG | - | tig0009232:26117-26136 | None:intergenic | 30.0% | |
| ATCTTCCTATCACTCTATTT+CGG | - | tig0009232:26283-26302 | None:intergenic | 30.0% | |
| ATAGGAAGATATGCGTTTAA+AGG | + | tig0009232:26293-26312 | Msa1346820:intron | 30.0% | |
| ! | GAACGAACATTTAACTTTAG+TGG | - | tig0009232:26340-26359 | None:intergenic | 30.0% |
| ! | GCATGAAAATAACTTTTGGT+TGG | + | tig0009232:26455-26474 | Msa1346820:intron | 30.0% |
| TAATACACTGTCTAACTTCT+TGG | + | tig0009232:26532-26551 | Msa1346820:intron | 30.0% | |
| TAAATATTTGTACGAGCTAC+CGG | + | tig0009232:26585-26604 | Msa1346820:CDS | 30.0% | |
| ! | TTTGAAATCTATTTCCACCA+AGG | - | tig0009232:26756-26775 | None:intergenic | 30.0% |
| ACGGAAATGATATTGTCATA+AGG | - | tig0009232:27071-27090 | None:intergenic | 30.0% | |
| CAAATTGGAAATCGCAAATC+TGG | - | tig0009232:24856-24875 | None:intergenic | 35.0% | |
| CAGATTTGCGATTTCCAATT+TGG | + | tig0009232:24854-24873 | Msa1346820:CDS | 35.0% | |
| GATTTGCGATTTCCAATTTG+GGG | + | tig0009232:24856-24875 | Msa1346820:CDS | 35.0% | |
| ! | TTTATCTCCGTTACCTGTTT+TGG | - | tig0009232:25095-25114 | None:intergenic | 35.0% |
| GAGAAAATCTAGAGAGTCAT+AGG | - | tig0009232:25617-25636 | None:intergenic | 35.0% | |
| ! | AACTTAAAGCTTTGGTCACT+TGG | + | tig0009232:25700-25719 | Msa1346820:intron | 35.0% |
| TTTAGGAGGGAAAAATGCTA+GGG | - | tig0009232:25943-25962 | None:intergenic | 35.0% | |
| GTCATTAGTACATGTTTAGG+AGG | - | tig0009232:25957-25976 | None:intergenic | 35.0% | |
| GTGTGAAAATAGAGGTTGAA+CGG | - | tig0009232:25994-26013 | None:intergenic | 35.0% | |
| GTGATCAAGTGTGAAAATAG+AGG | - | tig0009232:26002-26021 | None:intergenic | 35.0% | |
| !! | TTGTTAGGCTTTGAATCAAC+GGG | - | tig0009232:26026-26045 | None:intergenic | 35.0% |
| TCTCGGATAACACTTTCTAA+GGG | - | tig0009232:26155-26174 | None:intergenic | 35.0% | |
| ATCTCGGATAACACTTTCTA+AGG | - | tig0009232:26156-26175 | None:intergenic | 35.0% | |
| ATTATTGCTTTCCAGTACCT+TGG | + | tig0009232:26736-26755 | Msa1346820:CDS | 35.0% | |
| TATCCAGATAGGAACTTCAA+AGG | - | tig0009232:26860-26879 | None:intergenic | 35.0% | |
| TTGAAGTTCCTATCTGGATA+TGG | + | tig0009232:26860-26879 | Msa1346820:intron | 35.0% | |
| TAGGAACTACCTGATACTTT+CGG | + | tig0009232:26999-27018 | Msa1346820:intron | 35.0% | |
| AATCGTGATGTTTCACTCTA+AGG | - | tig0009232:27031-27050 | None:intergenic | 35.0% | |
| GTCTGTATATTTGAGTCTCA+CGG | - | tig0009232:27090-27109 | None:intergenic | 35.0% | |
| CAAATTGGAAATCGCAAATC+TGG | - | tig0009232:24856-24875 | None:intergenic | 35.0% | |
| CAGATTTGCGATTTCCAATT+TGG | + | tig0009232:24854-24873 | Msa1346820:CDS | 35.0% | |
| GATTTGCGATTTCCAATTTG+GGG | + | tig0009232:24856-24875 | Msa1346820:CDS | 35.0% | |
| ! | TTTATCTCCGTTACCTGTTT+TGG | - | tig0009232:25095-25114 | None:intergenic | 35.0% |
| GAGAAAATCTAGAGAGTCAT+AGG | - | tig0009232:25617-25636 | None:intergenic | 35.0% | |
| ! | AACTTAAAGCTTTGGTCACT+TGG | + | tig0009232:25700-25719 | Msa1346820:intron | 35.0% |
| TTTAGGAGGGAAAAATGCTA+GGG | - | tig0009232:25943-25962 | None:intergenic | 35.0% | |
| GTCATTAGTACATGTTTAGG+AGG | - | tig0009232:25957-25976 | None:intergenic | 35.0% | |
| GTGTGAAAATAGAGGTTGAA+CGG | - | tig0009232:25994-26013 | None:intergenic | 35.0% | |
| GTGATCAAGTGTGAAAATAG+AGG | - | tig0009232:26002-26021 | None:intergenic | 35.0% | |
| !! | TTGTTAGGCTTTGAATCAAC+GGG | - | tig0009232:26026-26045 | None:intergenic | 35.0% |
| TCTCGGATAACACTTTCTAA+GGG | - | tig0009232:26155-26174 | None:intergenic | 35.0% | |
| ATCTCGGATAACACTTTCTA+AGG | - | tig0009232:26156-26175 | None:intergenic | 35.0% | |
| ATTATTGCTTTCCAGTACCT+TGG | + | tig0009232:26736-26755 | Msa1346820:CDS | 35.0% | |
| TATCCAGATAGGAACTTCAA+AGG | - | tig0009232:26860-26879 | None:intergenic | 35.0% | |
| TTGAAGTTCCTATCTGGATA+TGG | + | tig0009232:26860-26879 | Msa1346820:intron | 35.0% | |
| TAGGAACTACCTGATACTTT+CGG | + | tig0009232:26999-27018 | Msa1346820:intron | 35.0% | |
| AATCGTGATGTTTCACTCTA+AGG | - | tig0009232:27031-27050 | None:intergenic | 35.0% | |
| GTCTGTATATTTGAGTCTCA+CGG | - | tig0009232:27090-27109 | None:intergenic | 35.0% | |
| !! | ATCGTTTTGGTCCCAAAATC+TGG | + | tig0009232:24990-25009 | Msa1346820:intron | 40.0% |
| !! | TCGTTTTGGTCCCAAAATCT+GGG | + | tig0009232:24991-25010 | Msa1346820:intron | 40.0% |
| ! | AACACACCAACCCAGATTTT+GGG | - | tig0009232:25004-25023 | None:intergenic | 40.0% |
| TTACTTCGGAGAAGATGAAG+GGG | - | tig0009232:25243-25262 | None:intergenic | 40.0% | |
| CTTACTTCGGAGAAGATGAA+GGG | - | tig0009232:25244-25263 | None:intergenic | 40.0% | |
| TCTTACTTCGGAGAAGATGA+AGG | - | tig0009232:25245-25264 | None:intergenic | 40.0% | |
| TTCATCTTCTCCGAAGTAAG+AGG | + | tig0009232:25244-25263 | Msa1346820:intron | 40.0% | |
| TCGGTTGCAACTTAAAGCTT+TGG | + | tig0009232:25692-25711 | Msa1346820:intron | 40.0% | |
| TCTGAAGAGAAGAGAAGTGA+AGG | - | tig0009232:25765-25784 | None:intergenic | 40.0% | |
| GGGAAAAATGCTAGGGATTA+GGG | - | tig0009232:25936-25955 | None:intergenic | 40.0% | |
| AGGGAAAAATGCTAGGGATT+AGG | - | tig0009232:25937-25956 | None:intergenic | 40.0% | |
| GTTTAGGAGGGAAAAATGCT+AGG | - | tig0009232:25944-25963 | None:intergenic | 40.0% | |
| GTTATCCGAGATAGAGTGAT+AGG | + | tig0009232:26164-26183 | Msa1346820:intron | 40.0% | |
| TTCCTCCTATCACTCTATCT+CGG | - | tig0009232:26172-26191 | None:intergenic | 40.0% | |
| GCTATCCGAAATAGAGTGAT+AGG | + | tig0009232:26275-26294 | Msa1346820:intron | 40.0% | |
| CACAGTGCATGTAGAAAATC+AGG | + | tig0009232:26362-26381 | Msa1346820:intron | 40.0% | |
| ATCTATTTCCACCAAGGTAC+TGG | - | tig0009232:26750-26769 | None:intergenic | 40.0% | |
| !! | GTACCTTTGAAGTTCCTATC+TGG | + | tig0009232:26854-26873 | Msa1346820:intron | 40.0% |
| !! | AGGAATTTGCCGAAAGTATC+AGG | - | tig0009232:27011-27030 | None:intergenic | 40.0% |
| CGAACATCACATTTGGTATG+GGG | - | tig0009232:27115-27134 | None:intergenic | 40.0% | |
| CCGAACATCACATTTGGTAT+GGG | - | tig0009232:27116-27135 | None:intergenic | 40.0% | |
| CCCATACCAAATGTGATGTT+CGG | + | tig0009232:27113-27132 | Msa1346820:CDS | 40.0% | |
| TCCGAACATCACATTTGGTA+TGG | - | tig0009232:27117-27136 | None:intergenic | 40.0% | |
| ! | CCTTTTCCGAACATCACATT+TGG | - | tig0009232:27122-27141 | None:intergenic | 40.0% |
| CCAAATGTGATGTTCGGAAA+AGG | + | tig0009232:27119-27138 | Msa1346820:CDS | 40.0% | |
| ATGTGATGTTCGGAAAAGGT+TGG | + | tig0009232:27123-27142 | Msa1346820:CDS | 40.0% | |
| !! | ATCGTTTTGGTCCCAAAATC+TGG | + | tig0009232:24990-25009 | Msa1346820:intron | 40.0% |
| !! | TCGTTTTGGTCCCAAAATCT+GGG | + | tig0009232:24991-25010 | Msa1346820:intron | 40.0% |
| ! | AACACACCAACCCAGATTTT+GGG | - | tig0009232:25004-25023 | None:intergenic | 40.0% |
| TTACTTCGGAGAAGATGAAG+GGG | - | tig0009232:25243-25262 | None:intergenic | 40.0% | |
| CTTACTTCGGAGAAGATGAA+GGG | - | tig0009232:25244-25263 | None:intergenic | 40.0% | |
| TCTTACTTCGGAGAAGATGA+AGG | - | tig0009232:25245-25264 | None:intergenic | 40.0% | |
| TTCATCTTCTCCGAAGTAAG+AGG | + | tig0009232:25244-25263 | Msa1346820:intron | 40.0% | |
| TCGGTTGCAACTTAAAGCTT+TGG | + | tig0009232:25692-25711 | Msa1346820:intron | 40.0% | |
| TCTGAAGAGAAGAGAAGTGA+AGG | - | tig0009232:25765-25784 | None:intergenic | 40.0% | |
| GGGAAAAATGCTAGGGATTA+GGG | - | tig0009232:25936-25955 | None:intergenic | 40.0% | |
| AGGGAAAAATGCTAGGGATT+AGG | - | tig0009232:25937-25956 | None:intergenic | 40.0% | |
| GTTTAGGAGGGAAAAATGCT+AGG | - | tig0009232:25944-25963 | None:intergenic | 40.0% | |
| GTTATCCGAGATAGAGTGAT+AGG | + | tig0009232:26164-26183 | Msa1346820:intron | 40.0% | |
| TTCCTCCTATCACTCTATCT+CGG | - | tig0009232:26172-26191 | None:intergenic | 40.0% | |
| GCTATCCGAAATAGAGTGAT+AGG | + | tig0009232:26275-26294 | Msa1346820:intron | 40.0% | |
| CACAGTGCATGTAGAAAATC+AGG | + | tig0009232:26362-26381 | Msa1346820:intron | 40.0% | |
| ATCTATTTCCACCAAGGTAC+TGG | - | tig0009232:26750-26769 | None:intergenic | 40.0% | |
| !! | GTACCTTTGAAGTTCCTATC+TGG | + | tig0009232:26854-26873 | Msa1346820:intron | 40.0% |
| !! | AGGAATTTGCCGAAAGTATC+AGG | - | tig0009232:27011-27030 | None:intergenic | 40.0% |
| CGAACATCACATTTGGTATG+GGG | - | tig0009232:27115-27134 | None:intergenic | 40.0% | |
| CCGAACATCACATTTGGTAT+GGG | - | tig0009232:27116-27135 | None:intergenic | 40.0% | |
| CCCATACCAAATGTGATGTT+CGG | + | tig0009232:27113-27132 | Msa1346820:CDS | 40.0% | |
| TCCGAACATCACATTTGGTA+TGG | - | tig0009232:27117-27136 | None:intergenic | 40.0% | |
| ! | CCTTTTCCGAACATCACATT+TGG | - | tig0009232:27122-27141 | None:intergenic | 40.0% |
| CCAAATGTGATGTTCGGAAA+AGG | + | tig0009232:27119-27138 | Msa1346820:CDS | 40.0% | |
| ATGTGATGTTCGGAAAAGGT+TGG | + | tig0009232:27123-27142 | Msa1346820:CDS | 40.0% | |
| CGATTTCCAATTTGGGGAAG+AGG | + | tig0009232:24862-24881 | Msa1346820:CDS | 45.0% | |
| TTTCCAATTTGGGGAAGAGG+AGG | + | tig0009232:24865-24884 | Msa1346820:CDS | 45.0% | |
| TTTGGTCCCAAAATCTGGGT+TGG | + | tig0009232:24995-25014 | Msa1346820:intron | 45.0% | |
| ! | CAACACACCAACCCAGATTT+TGG | - | tig0009232:25005-25024 | None:intergenic | 45.0% |
| TTAACGGAAGGGACCAAAAC+AGG | + | tig0009232:25079-25098 | Msa1346820:intron | 45.0% | |
| GAAGGGACCAAAACAGGTAA+CGG | + | tig0009232:25085-25104 | Msa1346820:intron | 45.0% | |
| ATCTAGAGAGTCATAGGGTG+TGG | - | tig0009232:25611-25630 | None:intergenic | 45.0% | |
| GGTCAAGTGAACAAAGCTTG+TGG | - | tig0009232:25639-25658 | None:intergenic | 45.0% | |
| GGGCAAAGAAGGGTGAATTA+GGG | - | tig0009232:25916-25935 | None:intergenic | 45.0% | |
| AGGGCAAAGAAGGGTGAATT+AGG | - | tig0009232:25917-25936 | None:intergenic | 45.0% | |
| CTAGGGATTAGGGCAAAGAA+GGG | - | tig0009232:25926-25945 | None:intergenic | 45.0% | |
| ATCCGAGATAGAGTGATAGG+AGG | + | tig0009232:26167-26186 | Msa1346820:intron | 45.0% | |
| CTCCAACCATCTGTCAACAA+CGG | - | tig0009232:26679-26698 | None:intergenic | 45.0% | |
| ATTGCTTTCCAGTACCTTGG+TGG | + | tig0009232:26739-26758 | Msa1346820:CDS | 45.0% | |
| TGATAGGGTGGATAATCAGC+TGG | - | tig0009232:26805-26824 | None:intergenic | 45.0% | |
| ACCCTATCATTCCATGAGTG+CGG | + | tig0009232:26816-26835 | Msa1346820:intron | 45.0% | |
| TCGTCGATCCATATCCAGAT+AGG | - | tig0009232:26871-26890 | None:intergenic | 45.0% | |
| ! | ACGAGTTTTTGTGCTGCCAA+TGG | + | tig0009232:27146-27165 | Msa1346820:CDS | 45.0% |
| TTGTGCTGCCAATGGTATTG+AGG | + | tig0009232:27154-27173 | Msa1346820:CDS | 45.0% | |
| ! | TGTGCTGCCAATGGTATTGA+GGG | + | tig0009232:27155-27174 | Msa1346820:CDS | 45.0% |
| ! | TTTCAAGTGCAAGTGCGTCA+TGG | + | tig0009232:27193-27212 | Msa1346820:CDS | 45.0% |
| CGATTTCCAATTTGGGGAAG+AGG | + | tig0009232:24862-24881 | Msa1346820:CDS | 45.0% | |
| TTTCCAATTTGGGGAAGAGG+AGG | + | tig0009232:24865-24884 | Msa1346820:CDS | 45.0% | |
| TTTGGTCCCAAAATCTGGGT+TGG | + | tig0009232:24995-25014 | Msa1346820:intron | 45.0% | |
| ! | CAACACACCAACCCAGATTT+TGG | - | tig0009232:25005-25024 | None:intergenic | 45.0% |
| TTAACGGAAGGGACCAAAAC+AGG | + | tig0009232:25079-25098 | Msa1346820:intron | 45.0% | |
| GAAGGGACCAAAACAGGTAA+CGG | + | tig0009232:25085-25104 | Msa1346820:intron | 45.0% | |
| ATCTAGAGAGTCATAGGGTG+TGG | - | tig0009232:25611-25630 | None:intergenic | 45.0% | |
| GGTCAAGTGAACAAAGCTTG+TGG | - | tig0009232:25639-25658 | None:intergenic | 45.0% | |
| GGGCAAAGAAGGGTGAATTA+GGG | - | tig0009232:25916-25935 | None:intergenic | 45.0% | |
| AGGGCAAAGAAGGGTGAATT+AGG | - | tig0009232:25917-25936 | None:intergenic | 45.0% | |
| CTAGGGATTAGGGCAAAGAA+GGG | - | tig0009232:25926-25945 | None:intergenic | 45.0% | |
| ATCCGAGATAGAGTGATAGG+AGG | + | tig0009232:26167-26186 | Msa1346820:intron | 45.0% | |
| CTCCAACCATCTGTCAACAA+CGG | - | tig0009232:26679-26698 | None:intergenic | 45.0% | |
| ATTGCTTTCCAGTACCTTGG+TGG | + | tig0009232:26739-26758 | Msa1346820:CDS | 45.0% | |
| TGATAGGGTGGATAATCAGC+TGG | - | tig0009232:26805-26824 | None:intergenic | 45.0% | |
| ACCCTATCATTCCATGAGTG+CGG | + | tig0009232:26816-26835 | Msa1346820:intron | 45.0% | |
| TCGTCGATCCATATCCAGAT+AGG | - | tig0009232:26871-26890 | None:intergenic | 45.0% | |
| ! | ACGAGTTTTTGTGCTGCCAA+TGG | + | tig0009232:27146-27165 | Msa1346820:CDS | 45.0% |
| TTGTGCTGCCAATGGTATTG+AGG | + | tig0009232:27154-27173 | Msa1346820:CDS | 45.0% | |
| ! | TGTGCTGCCAATGGTATTGA+GGG | + | tig0009232:27155-27174 | Msa1346820:CDS | 45.0% |
| ! | TTTCAAGTGCAAGTGCGTCA+TGG | + | tig0009232:27193-27212 | Msa1346820:CDS | 45.0% |
| !!! | ATTTTTTTGAATTTATTTAA+CGG | + | tig0009232:25063-25082 | Msa1346820:intron | 5.0% |
| !!! | ATTTTTTTGAATTTATTTAA+CGG | + | tig0009232:25063-25082 | Msa1346820:intron | 5.0% |
| TGGGTAAGGGGTTTGCGATT+TGG | + | tig0009232:24811-24830 | Msa1346820:CDS | 50.0% | |
| GGGTAAGGGGTTTGCGATTT+GGG | + | tig0009232:24812-24831 | Msa1346820:CDS | 50.0% | |
| GGTAAGGGGTTTGCGATTTG+GGG | + | tig0009232:24813-24832 | Msa1346820:CDS | 50.0% | |
| ! | TTTGCGATTTGGGGAAGAGG+TGG | + | tig0009232:24822-24841 | Msa1346820:CDS | 50.0% |
| ATTTGGGGAAGAGGTGGAGA+AGG | + | tig0009232:24828-24847 | Msa1346820:CDS | 50.0% | |
| TCTCCTCCTCTTCCCCAAAT+TGG | - | tig0009232:24871-24890 | None:intergenic | 50.0% | |
| ATTTGGGGAAGAGGAGGAGA+AGG | + | tig0009232:24871-24890 | Msa1346820:CDS | 50.0% | |
| GCTAGGGATTAGGGCAAAGA+AGG | - | tig0009232:25927-25946 | None:intergenic | 50.0% | |
| ! | TCTAGCAAGTGCCATTGCTC+CGG | - | tig0009232:26607-26626 | None:intergenic | 50.0% |
| ! | GAGCAATGGCACTTGCTAGA+TGG | + | tig0009232:26607-26626 | Msa1346820:CDS | 50.0% |
| ! | TGGCACTTGCTAGATGGTGA+TGG | + | tig0009232:26613-26632 | Msa1346820:CDS | 50.0% |
| ! | GGCACTTGCTAGATGGTGAT+GGG | + | tig0009232:26614-26633 | Msa1346820:CDS | 50.0% |
| AGTCAGCCGTTGTTGACAGA+TGG | + | tig0009232:26670-26689 | Msa1346820:CDS | 50.0% | |
| AGCCGTTGTTGACAGATGGT+TGG | + | tig0009232:26674-26693 | Msa1346820:CDS | 50.0% | |
| GCACTCATGGAATGATAGGG+TGG | - | tig0009232:26817-26836 | None:intergenic | 50.0% | |
| GCCGCACTCATGGAATGATA+GGG | - | tig0009232:26820-26839 | None:intergenic | 50.0% | |
| TGCCGCACTCATGGAATGAT+AGG | - | tig0009232:26821-26840 | None:intergenic | 50.0% | |
| TGGATCGACGAAATCACCGA+AGG | + | tig0009232:26880-26899 | Msa1346820:CDS | 50.0% | |
| TCGCAAACCCCTTACCCAAA+TGG | - | tig0009232:24809-24828 | None:intergenic | 50.0% | |
| TGGGTAAGGGGTTTGCGATT+TGG | + | tig0009232:24811-24830 | Msa1346820:CDS | 50.0% | |
| GGGTAAGGGGTTTGCGATTT+GGG | + | tig0009232:24812-24831 | Msa1346820:CDS | 50.0% | |
| GGTAAGGGGTTTGCGATTTG+GGG | + | tig0009232:24813-24832 | Msa1346820:CDS | 50.0% | |
| ! | TTTGCGATTTGGGGAAGAGG+TGG | + | tig0009232:24822-24841 | Msa1346820:CDS | 50.0% |
| ATTTGGGGAAGAGGTGGAGA+AGG | + | tig0009232:24828-24847 | Msa1346820:CDS | 50.0% | |
| TCTCCTCCTCTTCCCCAAAT+TGG | - | tig0009232:24871-24890 | None:intergenic | 50.0% | |
| ATTTGGGGAAGAGGAGGAGA+AGG | + | tig0009232:24871-24890 | Msa1346820:CDS | 50.0% | |
| GCTAGGGATTAGGGCAAAGA+AGG | - | tig0009232:25927-25946 | None:intergenic | 50.0% | |
| ! | TCTAGCAAGTGCCATTGCTC+CGG | - | tig0009232:26607-26626 | None:intergenic | 50.0% |
| ! | GAGCAATGGCACTTGCTAGA+TGG | + | tig0009232:26607-26626 | Msa1346820:CDS | 50.0% |
| ! | TGGCACTTGCTAGATGGTGA+TGG | + | tig0009232:26613-26632 | Msa1346820:CDS | 50.0% |
| ! | GGCACTTGCTAGATGGTGAT+GGG | + | tig0009232:26614-26633 | Msa1346820:CDS | 50.0% |
| AGTCAGCCGTTGTTGACAGA+TGG | + | tig0009232:26670-26689 | Msa1346820:CDS | 50.0% | |
| AGCCGTTGTTGACAGATGGT+TGG | + | tig0009232:26674-26693 | Msa1346820:CDS | 50.0% | |
| GCACTCATGGAATGATAGGG+TGG | - | tig0009232:26817-26836 | None:intergenic | 50.0% | |
| GCCGCACTCATGGAATGATA+GGG | - | tig0009232:26820-26839 | None:intergenic | 50.0% | |
| TGCCGCACTCATGGAATGAT+AGG | - | tig0009232:26821-26840 | None:intergenic | 50.0% | |
| TGGATCGACGAAATCACCGA+AGG | + | tig0009232:26880-26899 | Msa1346820:CDS | 50.0% | |
| ! | GGGTTTGCGATTTGGGGAAG+AGG | + | tig0009232:24819-24838 | Msa1346820:CDS | 55.0% |
| TGTACGAGCTACCGGAGCAA+TGG | + | tig0009232:26593-26612 | Msa1346820:CDS | 55.0% | |
| ACACGATGTTGCCGCACTCA+TGG | - | tig0009232:26830-26849 | None:intergenic | 55.0% | |
| ! | GCTGCCAATGGTATTGAGGG+CGG | + | tig0009232:27158-27177 | Msa1346820:CDS | 55.0% |
| GTCTCCGCCCTCAATACCAT+TGG | - | tig0009232:27165-27184 | None:intergenic | 55.0% | |
| ! | GGGTTTGCGATTTGGGGAAG+AGG | + | tig0009232:24819-24838 | Msa1346820:CDS | 55.0% |
| TGTACGAGCTACCGGAGCAA+TGG | + | tig0009232:26593-26612 | Msa1346820:CDS | 55.0% | |
| ACACGATGTTGCCGCACTCA+TGG | - | tig0009232:26830-26849 | None:intergenic | 55.0% | |
| ! | GCTGCCAATGGTATTGAGGG+CGG | + | tig0009232:27158-27177 | Msa1346820:CDS | 55.0% |
| GTCTCCGCCCTCAATACCAT+TGG | - | tig0009232:27165-27184 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0009232 | gene | 24808 | 27238 | 24808 | ID=Msa1346820;Name=Msa1346820 |
| tig0009232 | mRNA | 24808 | 27238 | 24808 | ID=Msa1346820-mRNA-1;Parent=Msa1346820;Name=Msa1346820-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|0.25|0|0.8|0.25|0|5|0|184 |
| tig0009232 | exon | 24808 | 24892 | 24808 | ID=Msa1346820-mRNA-1:exon:5662;Parent=Msa1346820-mRNA-1 |
| tig0009232 | exon | 26563 | 26704 | 26563 | ID=Msa1346820-mRNA-1:exon:5663;Parent=Msa1346820-mRNA-1 |
| tig0009232 | exon | 26729 | 26780 | 26729 | ID=Msa1346820-mRNA-1:exon:5664;Parent=Msa1346820-mRNA-1 |
| tig0009232 | exon | 26866 | 26901 | 26866 | ID=Msa1346820-mRNA-1:exon:5665;Parent=Msa1346820-mRNA-1 |
| tig0009232 | exon | 27002 | 27238 | 27002 | ID=Msa1346820-mRNA-1:exon:5666;Parent=Msa1346820-mRNA-1 |
| tig0009232 | CDS | 24808 | 24892 | 24808 | ID=Msa1346820-mRNA-1:cds;Parent=Msa1346820-mRNA-1 |
| tig0009232 | CDS | 26563 | 26704 | 26563 | ID=Msa1346820-mRNA-1:cds;Parent=Msa1346820-mRNA-1 |
| tig0009232 | CDS | 26729 | 26780 | 26729 | ID=Msa1346820-mRNA-1:cds;Parent=Msa1346820-mRNA-1 |
| tig0009232 | CDS | 26866 | 26901 | 26866 | ID=Msa1346820-mRNA-1:cds;Parent=Msa1346820-mRNA-1 |
| tig0009232 | CDS | 27002 | 27238 | 27002 | ID=Msa1346820-mRNA-1:cds;Parent=Msa1346820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
