Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1351270 | XP_039687614.1 | 90.909 | 561 | 31 | 7 | 46 | 606 | 1 | 541 | 0.0 | 931 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1351270 | sp|Q6AWY6|GRF3_ORYSJ | 57.944 | 107 | 30 | 2 | 172 | 264 | 52 | 157 | 2.28e-33 | 135 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1351270 | G7J891 | 90.553 | 561 | 32 | 8 | 46 | 606 | 1 | 540 | 0.0 | 924 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1351270 | TF | GRF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1351270 | MtrunA17_Chr3g0127641 | 90.374 | 561 | 32 | 9 | 46 | 606 | 1 | 539 | 0.0 | 917 |
| Msa1351270 | MtrunA17_Chr4g0021261 | 53.153 | 111 | 36 | 1 | 173 | 267 | 25 | 135 | 1.25e-33 | 131 |
| Msa1351270 | MtrunA17_Chr1g0152191 | 49.296 | 142 | 45 | 3 | 148 | 264 | 117 | 256 | 3.59e-33 | 135 |
| Msa1351270 | MtrunA17_Chr8g0343881 | 49.541 | 109 | 38 | 1 | 174 | 265 | 12 | 120 | 7.95e-31 | 123 |
| Msa1351270 | MtrunA17_Chr5g0409471 | 56.000 | 100 | 37 | 2 | 171 | 264 | 14 | 112 | 2.30e-30 | 121 |
| Msa1351270 | MtrunA17_Chr4g0070591 | 47.458 | 118 | 45 | 2 | 173 | 273 | 9 | 126 | 1.12e-29 | 120 |
| Msa1351270 | MtrunA17_Chr2g0300511 | 48.246 | 114 | 38 | 2 | 173 | 265 | 7 | 120 | 2.21e-29 | 119 |
| Msa1351270 | MtrunA17_Chr7g0265931 | 44.444 | 135 | 57 | 2 | 154 | 271 | 60 | 193 | 1.11e-28 | 118 |
| Msa1351270 | MtrunA17_Chr8g0351521 | 47.458 | 118 | 52 | 3 | 172 | 279 | 53 | 170 | 1.05e-22 | 101 |
| Msa1351270 | MtrunA17_Chr8g0351521 | 61.111 | 54 | 20 | 1 | 206 | 258 | 287 | 340 | 7.00e-13 | 70.9 |
| Msa1351270 | MtrunA17_Chr8g0351291 | 56.364 | 55 | 23 | 1 | 205 | 258 | 35 | 89 | 4.32e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1351270 | AT4G37740.1 | 55.263 | 114 | 34 | 2 | 173 | 270 | 164 | 276 | 4.38e-34 | 137 |
| Msa1351270 | AT5G53660.1 | 56.522 | 115 | 45 | 3 | 171 | 281 | 57 | 170 | 4.60e-32 | 127 |
| Msa1351270 | AT2G22840.1 | 55.172 | 116 | 35 | 2 | 173 | 272 | 133 | 247 | 4.28e-31 | 127 |
| Msa1351270 | AT3G13960.1 | 49.558 | 113 | 40 | 1 | 169 | 264 | 12 | 124 | 9.81e-31 | 124 |
| Msa1351270 | AT4G24150.3 | 42.331 | 163 | 64 | 5 | 147 | 288 | 90 | 243 | 1.32e-29 | 122 |
| Msa1351270 | AT4G24150.2 | 42.331 | 163 | 64 | 5 | 147 | 288 | 128 | 281 | 2.37e-29 | 122 |
| Msa1351270 | AT2G36400.1 | 51.695 | 118 | 35 | 2 | 174 | 270 | 77 | 193 | 1.29e-28 | 118 |
| Msa1351270 | AT3G52910.1 | 48.673 | 113 | 35 | 2 | 174 | 264 | 83 | 194 | 1.58e-26 | 112 |
| Msa1351270 | AT4G24150.1 | 36.702 | 188 | 64 | 5 | 147 | 288 | 128 | 306 | 4.20e-26 | 112 |
| Msa1351270 | AT2G06200.2 | 45.763 | 118 | 36 | 3 | 173 | 262 | 45 | 162 | 2.39e-25 | 106 |
| Msa1351270 | AT2G06200.1 | 45.763 | 118 | 36 | 3 | 173 | 262 | 6 | 123 | 3.47e-25 | 105 |
| Msa1351270 | AT2G45480.2 | 44.444 | 108 | 43 | 2 | 171 | 261 | 22 | 129 | 3.95e-19 | 89.0 |
| Msa1351270 | AT2G45480.3 | 44.444 | 108 | 43 | 2 | 171 | 261 | 22 | 129 | 3.22e-18 | 87.8 |
| Msa1351270 | AT2G45480.3 | 58.182 | 55 | 21 | 2 | 219 | 273 | 305 | 357 | 1.17e-12 | 70.9 |
| Msa1351270 | AT2G45480.1 | 44.444 | 108 | 43 | 2 | 171 | 261 | 20 | 127 | 3.41e-18 | 87.8 |
| Msa1351270 | AT2G45480.1 | 58.182 | 55 | 21 | 2 | 219 | 273 | 303 | 355 | 1.22e-12 | 70.5 |
| Msa1351270 | AT2G06200.3 | 72.727 | 44 | 10 | 1 | 221 | 262 | 8 | 51 | 4.44e-16 | 77.0 |
Find 143 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAAAAGGTTGAAAATTTA+AGG | 0.123717 | tig0012196:+59496 | None:intergenic |
| TAAACACAAACTAACCTTTA+AGG | 0.146408 | tig0012196:+59450 | None:intergenic |
| GCTTCCAACACAACCCTTAA+AGG | 0.155280 | tig0012196:-59464 | Msa1351270:intron |
| TCCCTTGGCGCTTCTAATTC+AGG | 0.215472 | tig0012196:-58104 | Msa1351270:CDS |
| CTTTCACAGTACTTGTTATT+AGG | 0.229946 | tig0012196:+58818 | None:intergenic |
| TCAATTTGAGGCTATCAAAT+AGG | 0.264552 | tig0012196:-58916 | Msa1351270:CDS |
| ACAACATACAACATGTCTTT+TGG | 0.266442 | tig0012196:-59572 | Msa1351270:CDS |
| AATCCAACTACAAGAAAATA+TGG | 0.279540 | tig0012196:-58641 | Msa1351270:CDS |
| TTAGAAGCGCCAAGGGAAAT+TGG | 0.295713 | tig0012196:+58110 | None:intergenic |
| AACCTCTTGGTTTCTCAGAT+TGG | 0.311180 | tig0012196:+57904 | None:intergenic |
| TTATGGGTTGCCGCCATTCT+CGG | 0.321119 | tig0012196:+60131 | None:intergenic |
| GCCCTTGATGATGCAACATT+TGG | 0.323926 | tig0012196:+57423 | None:intergenic |
| TATGATTTACAAGTACTTGA+TGG | 0.325776 | tig0012196:-59231 | Msa1351270:CDS |
| GAGATTTATGATTGTGTTAT+GGG | 0.337690 | tig0012196:+60115 | None:intergenic |
| GTCGAATCCATTGCCACTTC+AGG | 0.358075 | tig0012196:-57528 | Msa1351270:CDS |
| GTGGAAATGAATTCAGATAC+TGG | 0.360987 | tig0012196:+58009 | None:intergenic |
| AAACACAAACTAACCTTTAA+GGG | 0.361293 | tig0012196:+59451 | None:intergenic |
| ACTACTAGTGTTATTGTTGT+TGG | 0.363306 | tig0012196:+59742 | None:intergenic |
| TTCCACAGGCTTTCTTGAAC+GGG | 0.370446 | tig0012196:+58775 | None:intergenic |
| AGAGATTTATGATTGTGTTA+TGG | 0.379088 | tig0012196:+60114 | None:intergenic |
| GTCCACTAGCTGAAGTTCTA+AGG | 0.379508 | tig0012196:-57623 | Msa1351270:CDS |
| ATGATTAAACTTATTGAGTA+AGG | 0.386331 | tig0012196:+57386 | None:intergenic |
| GCTAATGCTATCATTGATAA+TGG | 0.393717 | tig0012196:-59527 | Msa1351270:CDS |
| ATGGCGGCTTCAATAGGAAT+AGG | 0.401179 | tig0012196:-59302 | Msa1351270:CDS |
| TCCATTGCCACTTCAGGAAC+AGG | 0.402246 | tig0012196:-57522 | Msa1351270:CDS |
| GCTGTTGATGCTGATGGTTA+TGG | 0.403679 | tig0012196:-59599 | Msa1351270:CDS |
| TTCATCACTTGATCTATCAA+TGG | 0.407184 | tig0012196:-57775 | Msa1351270:CDS |
| GGATTCAGTGTTATTATGAT+AGG | 0.409147 | tig0012196:+58031 | None:intergenic |
| ATAGTCATCATCAAATCAAA+AGG | 0.419333 | tig0012196:-58724 | Msa1351270:CDS |
| TTTGCATAATAGCAGCTTTG+AGG | 0.429903 | tig0012196:-58558 | Msa1351270:CDS |
| CTTCTGCACCTACCAGCCTC+TGG | 0.433695 | tig0012196:+58881 | None:intergenic |
| GGTGGAATGGCGGCTTCAAT+AGG | 0.433909 | tig0012196:-59308 | Msa1351270:CDS |
| ACCATTGTTGGAGGTGGTGG+TGG | 0.435162 | tig0012196:+57824 | None:intergenic |
| GAAAATGAAGATTGGAGATA+AGG | 0.436913 | tig0012196:+58581 | None:intergenic |
| TGGATGGTGGTTTCAATTTG+AGG | 0.446579 | tig0012196:-58928 | Msa1351270:CDS |
| CTCCTTTCACAATTGCTCAA+TGG | 0.446940 | tig0012196:-59274 | Msa1351270:CDS |
| GGCTCAATCCAGCCCAACCT+TGG | 0.448375 | tig0012196:-57665 | Msa1351270:CDS |
| GGATTAAGTAAGAGAGGAAA+GGG | 0.448727 | tig0012196:+57951 | None:intergenic |
| TCTGCTGCTGTTGATGCTGA+TGG | 0.451525 | tig0012196:-59605 | Msa1351270:CDS |
| GAAGCAGAAATGTTATGAAA+AGG | 0.454915 | tig0012196:+59482 | None:intergenic |
| ATTGTTGGAGGTGGTGGTGG+TGG | 0.456677 | tig0012196:+57827 | None:intergenic |
| CTGATGCATAACAACAAACT+TGG | 0.457493 | tig0012196:-58071 | Msa1351270:CDS |
| TATGCAAAGAAAATGAAGAT+TGG | 0.460286 | tig0012196:+58573 | None:intergenic |
| AACTGATGCAGAACCATTGT+TGG | 0.462885 | tig0012196:+57812 | None:intergenic |
| GAAAGAAGATGAGAAGGAAC+AGG | 0.467897 | tig0012196:+59200 | None:intergenic |
| TCATCACTTGATCTATCAAT+GGG | 0.468999 | tig0012196:-57774 | Msa1351270:CDS |
| CAATTTGTCTGCTAGTGGAT+TGG | 0.470772 | tig0012196:-60188 | None:intergenic |
| AGAATTTGTTGCATCACTGC+TGG | 0.475974 | tig0012196:+57584 | None:intergenic |
| GAACCTACCCAAGGTTGGGC+TGG | 0.475979 | tig0012196:+57657 | None:intergenic |
| AAGATTGGAGATAAGGATGA+AGG | 0.477847 | tig0012196:+58588 | None:intergenic |
| CTAAAATAGCATTCTCAAGT+TGG | 0.478113 | tig0012196:-57686 | Msa1351270:CDS |
| AATAACACTAGTAGTGTTGT+TGG | 0.478175 | tig0012196:-59734 | Msa1351270:CDS |
| CTAACCTTTAAGGGTTGTGT+TGG | 0.481457 | tig0012196:+59460 | None:intergenic |
| TCCTGTTCCTGAAGTGGCAA+TGG | 0.484261 | tig0012196:+57521 | None:intergenic |
| GGAACAGCCACAGTAAAATC+AGG | 0.486638 | tig0012196:+58668 | None:intergenic |
| AGTTCAGAACTGTTATATAG+TGG | 0.490372 | tig0012196:+57990 | None:intergenic |
| TGATAGATCAAGTGATGAAA+GGG | 0.490826 | tig0012196:+57779 | None:intergenic |
| TCAATGAAACTAAAACCTCT+TGG | 0.493104 | tig0012196:+57891 | None:intergenic |
| GAGATAAGGATGAAGGGGAG+TGG | 0.496353 | tig0012196:+58595 | None:intergenic |
| GTCCAAATGTTGCATCATCA+AGG | 0.496502 | tig0012196:-57425 | Msa1351270:CDS |
| AGATTGGAGATAAGGATGAA+GGG | 0.498515 | tig0012196:+58589 | None:intergenic |
| TTATTTGTGTGAAGTTCCAC+AGG | 0.498667 | tig0012196:+58761 | None:intergenic |
| CTGCTGGAAGTAACATTGCT+TGG | 0.498835 | tig0012196:+57600 | None:intergenic |
| TTGAGGCATGTCAAGAAGAC+AGG | 0.500003 | tig0012196:+60080 | None:intergenic |
| GCTCAATCCAGCCCAACCTT+GGG | 0.505605 | tig0012196:-57664 | Msa1351270:CDS |
| AGAACCATTGTTGGAGGTGG+TGG | 0.506509 | tig0012196:+57821 | None:intergenic |
| AGCAAATCAAAGGCCGAGAA+TGG | 0.507449 | tig0012196:-60144 | Msa1351270:CDS |
| GTTCCACAGGCTTTCTTGAA+CGG | 0.508728 | tig0012196:+58774 | None:intergenic |
| TGTTGAACCTACCCAAGGTT+GGG | 0.509162 | tig0012196:+57653 | None:intergenic |
| TTTCTTGTAGTTGGATTAGG+AGG | 0.509981 | tig0012196:+58647 | None:intergenic |
| GGCTTGGAGTGGATGCTGAA+TGG | 0.510711 | tig0012196:-58137 | Msa1351270:CDS |
| GATTGGAGATAAGGATGAAG+GGG | 0.516351 | tig0012196:+58590 | None:intergenic |
| CATGTCAAGAAGACAGGTGT+TGG | 0.521966 | tig0012196:+60086 | None:intergenic |
| TGGCGGCTTCAATAGGAATA+GGG | 0.523564 | tig0012196:-59301 | Msa1351270:CDS |
| TCAGATTGGAGAGTTTGCAT+TGG | 0.524106 | tig0012196:+57918 | None:intergenic |
| CAAGAAGACAGGTGTTGGAA+TGG | 0.524490 | tig0012196:+60091 | None:intergenic |
| GAATTGAATGAAAAGGGGCT+TGG | 0.524945 | tig0012196:-58153 | Msa1351270:intron |
| CACTAGTAGTGTTGTTGGGT+CGG | 0.525074 | tig0012196:-59729 | Msa1351270:CDS |
| GGGATTAAGTAAGAGAGGAA+AGG | 0.533228 | tig0012196:+57950 | None:intergenic |
| GGCCTTAGAACTTCAGCTAG+TGG | 0.534033 | tig0012196:+57621 | None:intergenic |
| TTGATAGATCAAGTGATGAA+AGG | 0.535432 | tig0012196:+57778 | None:intergenic |
| CTCCATTGAGCAATTGTGAA+AGG | 0.540021 | tig0012196:+59272 | None:intergenic |
| AATGGAGATCCAATTTCCCT+TGG | 0.541965 | tig0012196:-58119 | Msa1351270:CDS |
| TACCATTCCTGTTCCTGAAG+TGG | 0.542786 | tig0012196:+57515 | None:intergenic |
| GGAATGGTATCATCTCCATC+TGG | 0.544391 | tig0012196:-57501 | Msa1351270:CDS |
| ATTATGATAGGAACTTCCAT+TGG | 0.546307 | tig0012196:+58043 | None:intergenic |
| ACCACCACCACCTCCAACAA+TGG | 0.549376 | tig0012196:-57825 | Msa1351270:CDS |
| GCTTCAGTTTCTGATAGTAG+TGG | 0.551865 | tig0012196:-57456 | Msa1351270:CDS |
| ATACATGAAAGAAGATGAGA+AGG | 0.554354 | tig0012196:+59194 | None:intergenic |
| GGTGGTCACAGCAGGTGGAA+TGG | 0.556637 | tig0012196:-59321 | Msa1351270:intron |
| AACAATGGTTCTGCATCAGT+TGG | 0.557664 | tig0012196:-57810 | Msa1351270:CDS |
| TTATTATGCAAAACACCAGA+TGG | 0.559997 | tig0012196:+57486 | None:intergenic |
| AATTGAAACTTAAAAGCAGA+AGG | 0.561713 | tig0012196:+57335 | None:intergenic |
| AAAGACATGTTGTATGTTGT+GGG | 0.561732 | tig0012196:+59575 | None:intergenic |
| AAAAGACATGTTGTATGTTG+TGG | 0.562174 | tig0012196:+59574 | None:intergenic |
| AACAATACTGATCCAGAGGC+TGG | 0.566845 | tig0012196:-58893 | Msa1351270:CDS |
| TGAGTTTCGCGTTCAAGACA+AGG | 0.567509 | tig0012196:-59780 | Msa1351270:CDS |
| GTTTGTTGTTATGCATCAGA+GGG | 0.575473 | tig0012196:+58075 | None:intergenic |
| ATAACACTAGTAGTGTTGTT+GGG | 0.575929 | tig0012196:-59733 | Msa1351270:CDS |
| AACAAACTTGGAATGACCAA+TGG | 0.577256 | tig0012196:-58059 | Msa1351270:CDS |
| TAGTCATCATCAAATCAAAA+GGG | 0.580379 | tig0012196:-58723 | Msa1351270:CDS |
| CATGATTATCAAAGAATGAA+CGG | 0.581245 | tig0012196:+59642 | None:intergenic |
| TCCTGAATTAGAAGCGCCAA+GGG | 0.582031 | tig0012196:+58103 | None:intergenic |
| AGTTTGTTGTTATGCATCAG+AGG | 0.584443 | tig0012196:+58074 | None:intergenic |
| GTGTTGAACCTACCCAAGGT+TGG | 0.586263 | tig0012196:+57652 | None:intergenic |
| TGCAGAACCATTGTTGGAGG+TGG | 0.586637 | tig0012196:+57818 | None:intergenic |
| GAGTTTGCATTGGAACAACA+AGG | 0.591725 | tig0012196:+57928 | None:intergenic |
| ATACTGATCCAGAGGCTGGT+AGG | 0.593096 | tig0012196:-58889 | Msa1351270:CDS |
| ACACGATTTGTTGTTGTGAG+AGG | 0.596043 | tig0012196:+57549 | None:intergenic |
| TTGGCGCTTCTAATTCAGGA+TGG | 0.599912 | tig0012196:-58100 | Msa1351270:CDS |
| GTATAGTAGTACAGCAACAA+AGG | 0.600003 | tig0012196:+60051 | None:intergenic |
| TGGAAATGAATTCAGATACT+GGG | 0.603286 | tig0012196:+58010 | None:intergenic |
| TGCCACTTCAGGAACAGGAA+TGG | 0.604108 | tig0012196:-57517 | Msa1351270:CDS |
| ACAAGGGGATTAAGTAAGAG+AGG | 0.605379 | tig0012196:+57945 | None:intergenic |
| GTTTGCATTGGAACAACAAG+GGG | 0.608134 | tig0012196:+57930 | None:intergenic |
| CCTTGGGTAGGTTCAACACC+TGG | 0.608292 | tig0012196:-57648 | Msa1351270:CDS |
| ATCCTGAATTAGAAGCGCCA+AGG | 0.609515 | tig0012196:+58102 | None:intergenic |
| GAAGCATGGAAGCAAATCAA+AGG | 0.616024 | tig0012196:-60154 | Msa1351270:CDS |
| TCCCCGTTCAAGAAAGCCTG+TGG | 0.619148 | tig0012196:-58777 | Msa1351270:CDS |
| GGTAGGTGCAGAAGAACAGA+TGG | 0.619651 | tig0012196:-58872 | Msa1351270:CDS |
| GGTCACAGCAGGTGGAATGG+CGG | 0.620189 | tig0012196:-59318 | Msa1351270:intron |
| TCCAAATGTTGCATCATCAA+GGG | 0.620644 | tig0012196:-57424 | Msa1351270:CDS |
| TGGTGCGAATGTTGGAAGCA+TGG | 0.622631 | tig0012196:-60168 | Msa1351270:CDS |
| AAATCAAAGGCCGAGAATGG+CGG | 0.623807 | tig0012196:-60141 | Msa1351270:CDS |
| CTCCAATCTGAGAAACCAAG+AGG | 0.625201 | tig0012196:-57906 | Msa1351270:CDS |
| GAATGAAAAGGGGCTTGGAG+TGG | 0.630089 | tig0012196:-58148 | Msa1351270:intron |
| TAGTGGATTGGTGCGAATGT+TGG | 0.633501 | tig0012196:-60176 | Msa1351270:CDS |
| ACTTCAGCTAGTGGACCACC+AGG | 0.635831 | tig0012196:+57630 | None:intergenic |
| TCCACAGGCTTTCTTGAACG+GGG | 0.635923 | tig0012196:+58776 | None:intergenic |
| AGGCTTCAAATAAGCAACCA+AGG | 0.637520 | tig0012196:-58538 | Msa1351270:intron |
| AATCCAGCCCAACCTTGGGT+AGG | 0.638869 | tig0012196:-57660 | Msa1351270:CDS |
| AGCAACAAAGGCTAAGCTTG+AGG | 0.640935 | tig0012196:+60063 | None:intergenic |
| TAGGAACAATACTGATCCAG+AGG | 0.641405 | tig0012196:-58897 | Msa1351270:CDS |
| TGATGCAGAACCATTGTTGG+AGG | 0.644016 | tig0012196:+57815 | None:intergenic |
| CATTGAGCAATTGTGAAAGG+AGG | 0.644246 | tig0012196:+59275 | None:intergenic |
| AGTTTGCATTGGAACAACAA+GGG | 0.661506 | tig0012196:+57929 | None:intergenic |
| CCAGGTGTTGAACCTACCCA+AGG | 0.666817 | tig0012196:+57648 | None:intergenic |
| TCACTTGATCTATCAATGGG+AGG | 0.680795 | tig0012196:-57771 | Msa1351270:CDS |
| TTGGTCTAATGCAGAGACAG+TGG | 0.682367 | tig0012196:-57865 | Msa1351270:CDS |
| TGGGTAGGTTCAACACCTGG+TGG | 0.687244 | tig0012196:-57645 | Msa1351270:CDS |
| TGTGAAAGACATATGCATAG+AGG | 0.723539 | tig0012196:-58803 | Msa1351270:CDS |
| GATTATCAAAGAATGAACGG+TGG | 0.727234 | tig0012196:+59645 | None:intergenic |
| AATGCTATCATTGATAATGG+CGG | 0.749635 | tig0012196:-59524 | Msa1351270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAAATATATATATATATCT+AGG | + | tig0012196:57503-57522 | None:intergenic | 10.0% |
| !! | TGAAAATATGAAATTAATTA+AGG | + | tig0012196:58345-58364 | None:intergenic | 10.0% |
| !! | ATATATAGAAAAATAAGTAG+TGG | - | tig0012196:58079-58098 | Msa1351270:CDS | 15.0% |
| !!! | AAAAAAAATCAAGCTTTATT+TGG | + | tig0012196:59231-59250 | None:intergenic | 15.0% |
| !!! | TAAATAAATGCATTGTTTTA+TGG | - | tig0012196:59271-59290 | Msa1351270:CDS | 15.0% |
| !! | ATATATATATATCTAGGAGT+AGG | + | tig0012196:57497-57516 | None:intergenic | 20.0% |
| !!! | AAAATTAACTTTTTGAGGTA+AGG | + | tig0012196:57572-57591 | None:intergenic | 20.0% |
| !!! | TTACCTCAAAAAGTTAATTT+TGG | - | tig0012196:57571-57590 | Msa1351270:CDS | 20.0% |
| !!! | TTTGCTTTCATTTTAGTTAT+GGG | - | tig0012196:57686-57705 | Msa1351270:CDS | 20.0% |
| !! | ATGAAAAGGTTGAAAATTTA+AGG | + | tig0012196:57996-58015 | None:intergenic | 20.0% |
| !! | AAAAAGCAGAAAAAGTTAAT+GGG | + | tig0012196:58393-58412 | None:intergenic | 20.0% |
| !! | AAAAAAGCAGAAAAAGTTAA+TGG | + | tig0012196:58394-58413 | None:intergenic | 20.0% |
| !!! | TTTCATGTTTTGTTTTGATT+TGG | - | tig0012196:59195-59214 | Msa1351270:intron | 20.0% |
| !!! | TTTCTAGTTTGTTATTGATT+TGG | - | tig0012196:59312-59331 | Msa1351270:CDS | 20.0% |
| !! | ATGATTAAACTTATTGAGTA+AGG | + | tig0012196:60106-60125 | None:intergenic | 20.0% |
| ! | GAGATTTATGATTGTGTTAT+GGG | + | tig0012196:57377-57396 | None:intergenic | 25.0% |
| ! | AGAGATTTATGATTGTGTTA+TGG | + | tig0012196:57378-57397 | None:intergenic | 25.0% |
| !!! | GTTTGCTTTCATTTTAGTTA+TGG | - | tig0012196:57685-57704 | Msa1351270:CDS | 25.0% |
| !!! | TTGTTGTTGGTTTTTTTTGT+AGG | + | tig0012196:57737-57756 | None:intergenic | 25.0% |
| ! | CATGATTATCAAAGAATGAA+CGG | + | tig0012196:57850-57869 | None:intergenic | 25.0% |
| ! | AAACACAAACTAACCTTTAA+GGG | + | tig0012196:58041-58060 | None:intergenic | 25.0% |
| ! | TAAACACAAACTAACCTTTA+AGG | + | tig0012196:58042-58061 | None:intergenic | 25.0% |
| ! | TATGATTTACAAGTACTTGA+TGG | - | tig0012196:58258-58277 | Msa1351270:intron | 25.0% |
| !!! | TACAAACTTTTGACTCAAAA+TGG | + | tig0012196:58421-58440 | None:intergenic | 25.0% |
| ! | AAGGTAAATAGAATGAAAAG+TGG | + | tig0012196:58450-58469 | None:intergenic | 25.0% |
| ! | ATAGTCATCATCAAATCAAA+AGG | - | tig0012196:58765-58784 | Msa1351270:CDS | 25.0% |
| ! | TAGTCATCATCAAATCAAAA+GGG | - | tig0012196:58766-58785 | Msa1351270:CDS | 25.0% |
| !! | TATTTTCTTGTAGTTGGATT+AGG | + | tig0012196:58848-58867 | None:intergenic | 25.0% |
| ! | AATCCAACTACAAGAAAATA+TGG | - | tig0012196:58848-58867 | Msa1351270:CDS | 25.0% |
| ! | TATGCAAAGAAAATGAAGAT+TGG | + | tig0012196:58919-58938 | None:intergenic | 25.0% |
| ! | ATATTGAGTTTGACTAAATC+AGG | - | tig0012196:59027-59046 | Msa1351270:intron | 25.0% |
| !!! | TGTCTTTGTTTGTTTTGATT+TGG | - | tig0012196:59157-59176 | Msa1351270:intron | 25.0% |
| ! | ACAAAACATGAAAGTGAATA+AGG | + | tig0012196:59188-59207 | None:intergenic | 25.0% |
| ! | TTTAAGAGTGAATTTCATAG+AGG | + | tig0012196:59255-59274 | None:intergenic | 25.0% |
| !!! | GTTTTATGGTGTTAGTATTA+TGG | - | tig0012196:59285-59304 | Msa1351270:CDS | 25.0% |
| !! | ATTTGGTGAATTGAATGAAA+AGG | - | tig0012196:59329-59348 | Msa1351270:intron | 25.0% |
| ! | TTTGGTGAATTGAATGAAAA+GGG | - | tig0012196:59330-59349 | Msa1351270:intron | 25.0% |
| ! | AATTGAAACTTAAAAGCAGA+AGG | + | tig0012196:60157-60176 | None:intergenic | 25.0% |
| ! | AAGATAGATAGTGGTGTTTA+TGG | + | tig0012196:57549-57568 | None:intergenic | 30.0% |
| ! | CCACCAAAATTAACTTTTTG+AGG | + | tig0012196:57577-57596 | None:intergenic | 30.0% |
| ! | CCTCAAAAAGTTAATTTTGG+TGG | - | tig0012196:57574-57593 | Msa1351270:CDS | 30.0% |
| AAATGAAAGCAAACACACTT+TGG | + | tig0012196:57679-57698 | None:intergenic | 30.0% | |
| ! | ACTACTAGTGTTATTGTTGT+TGG | + | tig0012196:57750-57769 | None:intergenic | 30.0% |
| AATAACACTAGTAGTGTTGT+TGG | - | tig0012196:57755-57774 | Msa1351270:CDS | 30.0% | |
| ! | ATAACACTAGTAGTGTTGTT+GGG | - | tig0012196:57756-57775 | Msa1351270:CDS | 30.0% |
| AAAGACATGTTGTATGTTGT+GGG | + | tig0012196:57917-57936 | None:intergenic | 30.0% | |
| AAAAGACATGTTGTATGTTG+TGG | + | tig0012196:57918-57937 | None:intergenic | 30.0% | |
| ! | ACAACATACAACATGTCTTT+TGG | - | tig0012196:57917-57936 | Msa1351270:CDS | 30.0% |
| ! | CAACATACAACATGTCTTTT+GGG | - | tig0012196:57918-57937 | Msa1351270:CDS | 30.0% |
| ! | AACATACAACATGTCTTTTG+GGG | - | tig0012196:57919-57938 | Msa1351270:CDS | 30.0% |
| GCTAATGCTATCATTGATAA+TGG | - | tig0012196:57962-57981 | Msa1351270:CDS | 30.0% | |
| !! | AATGCTATCATTGATAATGG+CGG | - | tig0012196:57965-57984 | Msa1351270:CDS | 30.0% |
| GAAGCAGAAATGTTATGAAA+AGG | + | tig0012196:58010-58029 | None:intergenic | 30.0% | |
| !!! | ACTTGTGTTTTTTGTGTTTG+TGG | - | tig0012196:58147-58166 | Msa1351270:intron | 30.0% |
| ATACATGAAAGAAGATGAGA+AGG | + | tig0012196:58298-58317 | None:intergenic | 30.0% | |
| !! | CACATTGATTCAATGACAAA+AGG | + | tig0012196:58469-58488 | None:intergenic | 30.0% |
| TTTGTCATTGAATCAATGTG+TGG | - | tig0012196:58469-58488 | Msa1351270:intron | 30.0% | |
| AAAGCAACACATGATGAAAA+AGG | + | tig0012196:58495-58514 | None:intergenic | 30.0% | |
| ! | TCAATTTGAGGCTATCAAAT+AGG | - | tig0012196:58573-58592 | Msa1351270:CDS | 30.0% |
| GAAGAACAGATGGTAAAAAA+TGG | - | tig0012196:58627-58646 | Msa1351270:CDS | 30.0% | |
| !! | CTTTCACAGTACTTGTTATT+AGG | + | tig0012196:58674-58693 | None:intergenic | 30.0% |
| ! | GATCCATATTTTCTTGTAGT+TGG | + | tig0012196:58854-58873 | None:intergenic | 30.0% |
| GAAAATGAAGATTGGAGATA+AGG | + | tig0012196:58911-58930 | None:intergenic | 30.0% | |
| ATACAGATATAAACTCACCT+TGG | + | tig0012196:58971-58990 | None:intergenic | 30.0% | |
| ACAAAGACATAGTACATGTT+TGG | + | tig0012196:59146-59165 | None:intergenic | 30.0% | |
| TTGGTGAATTGAATGAAAAG+GGG | - | tig0012196:59331-59350 | Msa1351270:intron | 30.0% | |
| ATTATGATAGGAACTTCCAT+TGG | + | tig0012196:59449-59468 | None:intergenic | 30.0% | |
| ! | GGATTCAGTGTTATTATGAT+AGG | + | tig0012196:59461-59480 | None:intergenic | 30.0% |
| TGGAAATGAATTCAGATACT+GGG | + | tig0012196:59482-59501 | None:intergenic | 30.0% | |
| AGTTCAGAACTGTTATATAG+TGG | + | tig0012196:59502-59521 | None:intergenic | 30.0% | |
| TCAATGAAACTAAAACCTCT+TGG | + | tig0012196:59601-59620 | None:intergenic | 30.0% | |
| !!! | GTTTTAGTTTCATTGATGCT+TGG | - | tig0012196:59605-59624 | Msa1351270:CDS | 30.0% |
| TGATAGATCAAGTGATGAAA+GGG | + | tig0012196:59713-59732 | None:intergenic | 30.0% | |
| TTGATAGATCAAGTGATGAA+AGG | + | tig0012196:59714-59733 | None:intergenic | 30.0% | |
| TTCATCACTTGATCTATCAA+TGG | - | tig0012196:59714-59733 | Msa1351270:CDS | 30.0% | |
| TCATCACTTGATCTATCAAT+GGG | - | tig0012196:59715-59734 | Msa1351270:CDS | 30.0% | |
| CTAAAATAGCATTCTCAAGT+TGG | - | tig0012196:59803-59822 | Msa1351270:intron | 30.0% | |
| TTATTATGCAAAACACCAGA+TGG | + | tig0012196:60006-60025 | None:intergenic | 30.0% | |
| GTATAGTAGTACAGCAACAA+AGG | + | tig0012196:57441-57460 | None:intergenic | 35.0% | |
| ATAGTGGTGTTTATGGCATA+TGG | + | tig0012196:57542-57561 | None:intergenic | 35.0% | |
| GATTATCAAAGAATGAACGG+TGG | + | tig0012196:57847-57866 | None:intergenic | 35.0% | |
| ! | ACATACAACATGTCTTTTGG+GGG | - | tig0012196:57920-57939 | Msa1351270:CDS | 35.0% |
| !!! | TGTGTTTTTTGTGTTTGTGG+TGG | - | tig0012196:58150-58169 | Msa1351270:intron | 35.0% |
| !!! | TATCCTTGTTTTTGAAGCAG+TGG | - | tig0012196:58541-58560 | Msa1351270:CDS | 35.0% |
| TGTGAAAGACATATGCATAG+AGG | - | tig0012196:58686-58705 | Msa1351270:CDS | 35.0% | |
| TTATTTGTGTGAAGTTCCAC+AGG | + | tig0012196:58731-58750 | None:intergenic | 35.0% | |
| ! | TTTCTTGTAGTTGGATTAGG+AGG | + | tig0012196:58845-58864 | None:intergenic | 35.0% |
| AGATTGGAGATAAGGATGAA+GGG | + | tig0012196:58903-58922 | None:intergenic | 35.0% | |
| AAGATTGGAGATAAGGATGA+AGG | + | tig0012196:58904-58923 | None:intergenic | 35.0% | |
| TTTGCATAATAGCAGCTTTG+AGG | - | tig0012196:58931-58950 | Msa1351270:CDS | 35.0% | |
| ! | TGATTTTGCTGAATCCCTTA+AGG | - | tig0012196:59059-59078 | Msa1351270:intron | 35.0% |
| TTAGAAGATCCAAGCCTTAA+GGG | + | tig0012196:59076-59095 | None:intergenic | 35.0% | |
| !! | GTTTGTTGTTATGCATCAGA+GGG | + | tig0012196:59417-59436 | None:intergenic | 35.0% |
| !! | AGTTTGTTGTTATGCATCAG+AGG | + | tig0012196:59418-59437 | None:intergenic | 35.0% |
| CTGATGCATAACAACAAACT+TGG | - | tig0012196:59418-59437 | Msa1351270:intron | 35.0% | |
| AACAAACTTGGAATGACCAA+TGG | - | tig0012196:59430-59449 | Msa1351270:intron | 35.0% | |
| GTGGAAATGAATTCAGATAC+TGG | + | tig0012196:59483-59502 | None:intergenic | 35.0% | |
| GGATTAAGTAAGAGAGGAAA+GGG | + | tig0012196:59541-59560 | None:intergenic | 35.0% | |
| AGTTTGCATTGGAACAACAA+GGG | + | tig0012196:59563-59582 | None:intergenic | 35.0% | |
| TCCAAATGTTGCATCATCAA+GGG | - | tig0012196:60065-60084 | Msa1351270:CDS | 35.0% | |
| GAAGCATGGAAGCAAATCAA+AGG | - | tig0012196:57335-57354 | Msa1351270:three_prime_UTR | 40.0% | |
| GAGGTAAGGAAGATAGATAG+TGG | + | tig0012196:57558-57577 | None:intergenic | 40.0% | |
| ! | CTAACCTTTAAGGGTTGTGT+TGG | + | tig0012196:58032-58051 | None:intergenic | 40.0% |
| CATTGAGCAATTGTGAAAGG+AGG | + | tig0012196:58217-58236 | None:intergenic | 40.0% | |
| CTCCTTTCACAATTGCTCAA+TGG | - | tig0012196:58215-58234 | Msa1351270:intron | 40.0% | |
| CTCCATTGAGCAATTGTGAA+AGG | + | tig0012196:58220-58239 | None:intergenic | 40.0% | |
| GAAAGAAGATGAGAAGGAAC+AGG | + | tig0012196:58292-58311 | None:intergenic | 40.0% | |
| CATCCACTGCTTCAAAAACA+AGG | + | tig0012196:58547-58566 | None:intergenic | 40.0% | |
| !!! | CTTGTTTTTGAAGCAGTGGA+TGG | - | tig0012196:58545-58564 | Msa1351270:CDS | 40.0% |
| ! | TGGATGGTGGTTTCAATTTG+AGG | - | tig0012196:58561-58580 | Msa1351270:CDS | 40.0% |
| TAGGAACAATACTGATCCAG+AGG | - | tig0012196:58592-58611 | Msa1351270:CDS | 40.0% | |
| ! | TTCTCTGCCTGATTTTACTG+TGG | - | tig0012196:58814-58833 | Msa1351270:CDS | 40.0% |
| GATTGGAGATAAGGATGAAG+GGG | + | tig0012196:58902-58921 | None:intergenic | 40.0% | |
| AGGCTTCAAATAAGCAACCA+AGG | - | tig0012196:58951-58970 | Msa1351270:intron | 40.0% | |
| GGGATTCAGCAAAATCACAA+TGG | + | tig0012196:59056-59075 | None:intergenic | 40.0% | |
| CTTAGAAGATCCAAGCCTTA+AGG | + | tig0012196:59077-59096 | None:intergenic | 40.0% | |
| GAATTGAATGAAAAGGGGCT+TGG | - | tig0012196:59336-59355 | Msa1351270:intron | 40.0% | |
| AATGGAGATCCAATTTCCCT+TGG | - | tig0012196:59370-59389 | Msa1351270:intron | 40.0% | |
| GGGATTAAGTAAGAGAGGAA+AGG | + | tig0012196:59542-59561 | None:intergenic | 40.0% | |
| ACAAGGGGATTAAGTAAGAG+AGG | + | tig0012196:59547-59566 | None:intergenic | 40.0% | |
| GTTTGCATTGGAACAACAAG+GGG | + | tig0012196:59562-59581 | None:intergenic | 40.0% | |
| GAGTTTGCATTGGAACAACA+AGG | + | tig0012196:59564-59583 | None:intergenic | 40.0% | |
| TCAGATTGGAGAGTTTGCAT+TGG | + | tig0012196:59574-59593 | None:intergenic | 40.0% | |
| AACCTCTTGGTTTCTCAGAT+TGG | + | tig0012196:59588-59607 | None:intergenic | 40.0% | |
| AACTGATGCAGAACCATTGT+TGG | + | tig0012196:59680-59699 | None:intergenic | 40.0% | |
| ! | AACAATGGTTCTGCATCAGT+TGG | - | tig0012196:59679-59698 | Msa1351270:CDS | 40.0% |
| TCACTTGATCTATCAATGGG+AGG | - | tig0012196:59718-59737 | Msa1351270:CDS | 40.0% | |
| !! | AGAATTTGTTGCATCACTGC+TGG | + | tig0012196:59908-59927 | None:intergenic | 40.0% |
| !! | ACACGATTTGTTGTTGTGAG+AGG | + | tig0012196:59943-59962 | None:intergenic | 40.0% |
| GCTTCAGTTTCTGATAGTAG+TGG | - | tig0012196:60033-60052 | Msa1351270:intron | 40.0% | |
| GTCCAAATGTTGCATCATCA+AGG | - | tig0012196:60064-60083 | Msa1351270:CDS | 40.0% | |
| AGCAAATCAAAGGCCGAGAA+TGG | - | tig0012196:57345-57364 | Msa1351270:three_prime_UTR | 45.0% | |
| AAATCAAAGGCCGAGAATGG+CGG | - | tig0012196:57348-57367 | Msa1351270:three_prime_UTR | 45.0% | |
| !! | CAAGAAGACAGGTGTTGGAA+TGG | + | tig0012196:57401-57420 | None:intergenic | 45.0% |
| CATGTCAAGAAGACAGGTGT+TGG | + | tig0012196:57406-57425 | None:intergenic | 45.0% | |
| TTGAGGCATGTCAAGAAGAC+AGG | + | tig0012196:57412-57431 | None:intergenic | 45.0% | |
| AGCAACAAAGGCTAAGCTTG+AGG | + | tig0012196:57429-57448 | None:intergenic | 45.0% | |
| TGAGTTTCGCGTTCAAGACA+AGG | - | tig0012196:57709-57728 | Msa1351270:CDS | 45.0% | |
| ! | CACTAGTAGTGTTGTTGGGT+CGG | - | tig0012196:57760-57779 | Msa1351270:CDS | 45.0% |
| GCTGTTGATGCTGATGGTTA+TGG | - | tig0012196:57890-57909 | Msa1351270:CDS | 45.0% | |
| GCTTCCAACACAACCCTTAA+AGG | - | tig0012196:58025-58044 | Msa1351270:CDS | 45.0% | |
| ATGGCGGCTTCAATAGGAAT+AGG | - | tig0012196:58187-58206 | Msa1351270:intron | 45.0% | |
| TGGCGGCTTCAATAGGAATA+GGG | - | tig0012196:58188-58207 | Msa1351270:intron | 45.0% | |
| !!! | GTTTTTGAAGCAGTGGATGG+TGG | - | tig0012196:58548-58567 | Msa1351270:CDS | 45.0% |
| AACAATACTGATCCAGAGGC+TGG | - | tig0012196:58596-58615 | Msa1351270:CDS | 45.0% | |
| TTCCACAGGCTTTCTTGAAC+GGG | + | tig0012196:58717-58736 | None:intergenic | 45.0% | |
| GTTCCACAGGCTTTCTTGAA+CGG | + | tig0012196:58718-58737 | None:intergenic | 45.0% | |
| GGAACAGCCACAGTAAAATC+AGG | + | tig0012196:58824-58843 | None:intergenic | 45.0% | |
| TTGCTGAATCCCTTAAGGCT+TGG | - | tig0012196:59064-59083 | Msa1351270:intron | 45.0% | |
| !! | TTAGAAGCGCCAAGGGAAAT+TGG | + | tig0012196:59382-59401 | None:intergenic | 45.0% |
| !! | TCCTGAATTAGAAGCGCCAA+GGG | + | tig0012196:59389-59408 | None:intergenic | 45.0% |
| !! | ATCCTGAATTAGAAGCGCCA+AGG | + | tig0012196:59390-59409 | None:intergenic | 45.0% |
| TTGGCGCTTCTAATTCAGGA+TGG | - | tig0012196:59389-59408 | Msa1351270:intron | 45.0% | |
| CTCCAATCTGAGAAACCAAG+AGG | - | tig0012196:59583-59602 | Msa1351270:CDS | 45.0% | |
| TTGGTCTAATGCAGAGACAG+TGG | - | tig0012196:59624-59643 | Msa1351270:CDS | 45.0% | |
| TGATGCAGAACCATTGTTGG+AGG | + | tig0012196:59677-59696 | None:intergenic | 45.0% | |
| TGTTGAACCTACCCAAGGTT+GGG | + | tig0012196:59839-59858 | None:intergenic | 45.0% | |
| GTCCACTAGCTGAAGTTCTA+AGG | - | tig0012196:59866-59885 | Msa1351270:intron | 45.0% | |
| CTGCTGGAAGTAACATTGCT+TGG | + | tig0012196:59892-59911 | None:intergenic | 45.0% | |
| TACCATTCCTGTTCCTGAAG+TGG | + | tig0012196:59977-59996 | None:intergenic | 45.0% | |
| GGAATGGTATCATCTCCATC+TGG | - | tig0012196:59988-60007 | Msa1351270:intron | 45.0% | |
| !! | GCCCTTGATGATGCAACATT+TGG | + | tig0012196:60069-60088 | None:intergenic | 45.0% |
| TGGTGCGAATGTTGGAAGCA+TGG | - | tig0012196:57321-57340 | Msa1351270:three_prime_UTR | 50.0% | |
| ! | TTATGGGTTGCCGCCATTCT+CGG | + | tig0012196:57361-57380 | None:intergenic | 50.0% |
| TCTGCTGCTGTTGATGCTGA+TGG | - | tig0012196:57884-57903 | Msa1351270:CDS | 50.0% | |
| ATACTGATCCAGAGGCTGGT+AGG | - | tig0012196:58600-58619 | Msa1351270:CDS | 50.0% | |
| GGTAGGTGCAGAAGAACAGA+TGG | - | tig0012196:58617-58636 | Msa1351270:CDS | 50.0% | |
| TCCACAGGCTTTCTTGAACG+GGG | + | tig0012196:58716-58735 | None:intergenic | 50.0% | |
| GAGATAAGGATGAAGGGGAG+TGG | + | tig0012196:58897-58916 | None:intergenic | 50.0% | |
| GAATGAAAAGGGGCTTGGAG+TGG | - | tig0012196:59341-59360 | Msa1351270:intron | 50.0% | |
| TCCCTTGGCGCTTCTAATTC+AGG | - | tig0012196:59385-59404 | Msa1351270:intron | 50.0% | |
| AGAACCATTGTTGGAGGTGG+TGG | + | tig0012196:59671-59690 | None:intergenic | 50.0% | |
| TGCAGAACCATTGTTGGAGG+TGG | + | tig0012196:59674-59693 | None:intergenic | 50.0% | |
| GTGTTGAACCTACCCAAGGT+TGG | + | tig0012196:59840-59859 | None:intergenic | 50.0% | |
| GGCCTTAGAACTTCAGCTAG+TGG | + | tig0012196:59871-59890 | None:intergenic | 50.0% | |
| ! | GTCGAATCCATTGCCACTTC+AGG | - | tig0012196:59961-59980 | Msa1351270:intron | 50.0% |
| ! | TCCATTGCCACTTCAGGAAC+AGG | - | tig0012196:59967-59986 | Msa1351270:intron | 50.0% |
| TCCTGTTCCTGAAGTGGCAA+TGG | + | tig0012196:59971-59990 | None:intergenic | 50.0% | |
| ! | TGCCACTTCAGGAACAGGAA+TGG | - | tig0012196:59972-59991 | Msa1351270:intron | 50.0% |
| !! | GGGTCGGTGCAGAGTTTTGA+AGG | - | tig0012196:57776-57795 | Msa1351270:CDS | 55.0% |
| GGGGGTGATTCTTCTGCTCT+AGG | - | tig0012196:57938-57957 | Msa1351270:CDS | 55.0% | |
| GTGTTTGTGGTGGTCACAGC+AGG | - | tig0012196:58160-58179 | Msa1351270:intron | 55.0% | |
| TTTGTGGTGGTCACAGCAGG+TGG | - | tig0012196:58163-58182 | Msa1351270:intron | 55.0% | |
| GGTGGAATGGCGGCTTCAAT+AGG | - | tig0012196:58181-58200 | Msa1351270:intron | 55.0% | |
| TCCCCGTTCAAGAAAGCCTG+TGG | - | tig0012196:58712-58731 | Msa1351270:CDS | 55.0% | |
| GGCTTGGAGTGGATGCTGAA+TGG | - | tig0012196:59352-59371 | Msa1351270:intron | 55.0% | |
| !! | ATTGTTGGAGGTGGTGGTGG+TGG | + | tig0012196:59665-59684 | None:intergenic | 55.0% |
| ACCACCACCACCTCCAACAA+TGG | - | tig0012196:59664-59683 | Msa1351270:CDS | 55.0% | |
| ! | ACCATTGTTGGAGGTGGTGG+TGG | + | tig0012196:59668-59687 | None:intergenic | 55.0% |
| GCTCAATCCAGCCCAACCTT+GGG | - | tig0012196:59825-59844 | Msa1351270:intron | 55.0% | |
| AATCCAGCCCAACCTTGGGT+AGG | - | tig0012196:59829-59848 | Msa1351270:intron | 55.0% | |
| !! | CCAGGTGTTGAACCTACCCA+AGG | + | tig0012196:59844-59863 | None:intergenic | 55.0% |
| CCTTGGGTAGGTTCAACACC+TGG | - | tig0012196:59841-59860 | Msa1351270:intron | 55.0% | |
| TGGGTAGGTTCAACACCTGG+TGG | - | tig0012196:59844-59863 | Msa1351270:intron | 55.0% | |
| ! | ACTTCAGCTAGTGGACCACC+AGG | + | tig0012196:59862-59881 | None:intergenic | 55.0% |
| GGTGGTCACAGCAGGTGGAA+TGG | - | tig0012196:58168-58187 | Msa1351270:intron | 60.0% | |
| GGTCACAGCAGGTGGAATGG+CGG | - | tig0012196:58171-58190 | Msa1351270:intron | 60.0% | |
| CTTCTGCACCTACCAGCCTC+TGG | + | tig0012196:58611-58630 | None:intergenic | 60.0% | |
| GGCTCAATCCAGCCCAACCT+TGG | - | tig0012196:59824-59843 | Msa1351270:intron | 60.0% | |
| GAACCTACCCAAGGTTGGGC+TGG | + | tig0012196:59835-59854 | None:intergenic | 60.0% | |
| !! | GGAGGTGGTGGTGGTGGTGT+TGG | + | tig0012196:59659-59678 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0012196 | gene | 57316 | 60195 | 57316 | ID=Msa1351270;Name=Msa1351270 |
| tig0012196 | mRNA | 57316 | 60195 | 57316 | ID=Msa1351270-mRNA-1;Parent=Msa1351270;Name=Msa1351270-mRNA-1;_AED=0.07;_eAED=0.08;_QI=0|0.25|0.2|0.8|1|1|5|52|606 |
| tig0012196 | exon | 57316 | 58160 | 57316 | ID=Msa1351270-mRNA-1:exon:7677;Parent=Msa1351270-mRNA-1 |
| tig0012196 | exon | 58539 | 58953 | 58539 | ID=Msa1351270-mRNA-1:exon:7676;Parent=Msa1351270-mRNA-1 |
| tig0012196 | exon | 59198 | 59332 | 59198 | ID=Msa1351270-mRNA-1:exon:7675;Parent=Msa1351270-mRNA-1 |
| tig0012196 | exon | 59465 | 59809 | 59465 | ID=Msa1351270-mRNA-1:exon:7674;Parent=Msa1351270-mRNA-1 |
| tig0012196 | exon | 60063 | 60195 | 60063 | ID=Msa1351270-mRNA-1:exon:7673;Parent=Msa1351270-mRNA-1 |
| tig0012196 | CDS | 60063 | 60195 | 60063 | ID=Msa1351270-mRNA-1:cds;Parent=Msa1351270-mRNA-1 |
| tig0012196 | CDS | 59465 | 59809 | 59465 | ID=Msa1351270-mRNA-1:cds;Parent=Msa1351270-mRNA-1 |
| tig0012196 | CDS | 59198 | 59332 | 59198 | ID=Msa1351270-mRNA-1:cds;Parent=Msa1351270-mRNA-1 |
| tig0012196 | CDS | 58539 | 58953 | 58539 | ID=Msa1351270-mRNA-1:cds;Parent=Msa1351270-mRNA-1 |
| tig0012196 | CDS | 57368 | 58160 | 57368 | ID=Msa1351270-mRNA-1:cds;Parent=Msa1351270-mRNA-1 |
| tig0012196 | three_prime_UTR | 57316 | 57367 | 57316 | ID=Msa1351270-mRNA-1:three_prime_utr;Parent=Msa1351270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
