Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1351330 | XP_039686389.1 | 95.567 | 203 | 9 | 0 | 10 | 212 | 1 | 203 | 6.30e-135 | 408 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1351330 | sp|Q6NQJ7|FRS4_ARATH | 32.222 | 180 | 106 | 5 | 41 | 214 | 1 | 170 | 3.92e-16 | 80.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1351330 | A0A396J7J0 | 96.512 | 172 | 6 | 0 | 41 | 212 | 1 | 172 | 1.49e-112 | 347 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1351330 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1351330 | MtrunA17_Chr2g0296781 | 96.512 | 172 | 6 | 0 | 41 | 212 | 1 | 172 | 2.87e-116 | 347 |
| Msa1351330 | MtrunA17_Chr1g0196541 | 58.140 | 172 | 72 | 0 | 41 | 212 | 1 | 172 | 3.11e-63 | 209 |
| Msa1351330 | MtrunA17_Chr6g0476431 | 94.318 | 88 | 5 | 0 | 41 | 128 | 1 | 88 | 2.66e-56 | 174 |
| Msa1351330 | MtrunA17_Chr6g0477261 | 93.333 | 60 | 4 | 0 | 152 | 211 | 1 | 60 | 2.07e-30 | 117 |
| Msa1351330 | MtrunA17_Chr6g0451441 | 31.746 | 189 | 119 | 5 | 17 | 199 | 64 | 248 | 1.43e-23 | 97.8 |
| Msa1351330 | MtrunA17_Chr5g0441581 | 32.961 | 179 | 107 | 4 | 37 | 212 | 32 | 200 | 9.28e-20 | 87.0 |
| Msa1351330 | MtrunA17_Chr5g0448761 | 27.660 | 188 | 126 | 5 | 37 | 215 | 60 | 246 | 7.22e-14 | 70.1 |
| Msa1351330 | MtrunA17_Chr2g0329031 | 28.177 | 181 | 115 | 5 | 35 | 210 | 12 | 182 | 7.01e-13 | 67.0 |
| Msa1351330 | MtrunA17_Chr2g0291591 | 24.870 | 193 | 131 | 3 | 27 | 212 | 54 | 239 | 7.55e-12 | 63.9 |
| Msa1351330 | MtrunA17_Chr7g0258861 | 28.000 | 175 | 121 | 3 | 37 | 206 | 10 | 184 | 1.88e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1351330 | AT1G76320.2 | 32.222 | 180 | 106 | 5 | 41 | 214 | 1 | 170 | 3.36e-17 | 80.1 |
| Msa1351330 | AT1G76320.1 | 32.222 | 180 | 106 | 5 | 41 | 214 | 1 | 170 | 3.99e-17 | 80.1 |
| Msa1351330 | AT1G76320.4 | 32.222 | 180 | 106 | 5 | 41 | 214 | 1 | 170 | 3.99e-17 | 80.1 |
| Msa1351330 | AT1G76320.3 | 32.222 | 180 | 106 | 5 | 41 | 214 | 1 | 170 | 4.12e-17 | 79.7 |
| Msa1351330 | AT4G38180.1 | 26.316 | 171 | 118 | 3 | 37 | 199 | 73 | 243 | 2.67e-12 | 65.9 |
| Msa1351330 | AT4G15090.1 | 23.370 | 184 | 136 | 3 | 37 | 215 | 51 | 234 | 4.41e-11 | 62.4 |
| Msa1351330 | AT4G15090.5 | 23.370 | 184 | 136 | 3 | 37 | 215 | 51 | 234 | 4.41e-11 | 62.4 |
| Msa1351330 | AT4G15090.3 | 23.370 | 184 | 136 | 3 | 37 | 215 | 51 | 234 | 4.41e-11 | 62.4 |
| Msa1351330 | AT4G15090.2 | 23.370 | 184 | 136 | 3 | 37 | 215 | 51 | 234 | 4.41e-11 | 62.4 |
| Msa1351330 | AT4G15090.4 | 23.370 | 184 | 136 | 3 | 37 | 215 | 51 | 234 | 4.41e-11 | 62.4 |
Find 37 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACACTGCGTTTGAGTTAT+AGG | 0.177962 | tig0012201:-51402 | None:intergenic |
| AATGCGTGTATTTATTTAGA+TGG | 0.249459 | tig0012201:+51435 | Msa1351330:CDS |
| TATGCTGAACGGGTGGGTTT+TGG | 0.279098 | tig0012201:+51267 | Msa1351330:CDS |
| TTAGATCGAACAAGAATATA+GGG | 0.302032 | tig0012201:+51526 | Msa1351330:CDS |
| TGCGTTTGAGTTATAGGATT+TGG | 0.304891 | tig0012201:-51396 | None:intergenic |
| ATTTGAGTCTATTGATGAAT+TGG | 0.319207 | tig0012201:+51140 | Msa1351330:CDS |
| GGTTATGAAAATCTCACATT+TGG | 0.334024 | tig0012201:+51636 | Msa1351330:CDS |
| TTTAGATCGAACAAGAATAT+AGG | 0.366556 | tig0012201:+51525 | Msa1351330:CDS |
| CTAAAATACCTTGCTTTCCC+TGG | 0.410842 | tig0012201:-51507 | None:intergenic |
| TCCTTTGTCGTTGAAGCAAA+TGG | 0.422234 | tig0012201:+51615 | Msa1351330:CDS |
| CCTTGTGATGGGATGTCATT+CGG | 0.449339 | tig0012201:+51210 | Msa1351330:CDS |
| CATAATCATGATCTAAGTCC+AGG | 0.457184 | tig0012201:+51489 | Msa1351330:CDS |
| TTACAAGAATTATGCTGAAC+GGG | 0.461474 | tig0012201:+51257 | Msa1351330:CDS |
| AAGCAAGACGACTACGACTT+GGG | 0.474410 | tig0012201:+51688 | Msa1351330:CDS |
| TATAACTCAAACGCAGTGTA+AGG | 0.477984 | tig0012201:+51404 | Msa1351330:CDS |
| AATGATTGTTTAGAAGCAAA+TGG | 0.480295 | tig0012201:+51168 | Msa1351330:CDS |
| GATGTCATTCGGATCTGAAA+AGG | 0.494917 | tig0012201:+51221 | Msa1351330:CDS |
| TTTGTTGTATTAGTGCAAGA+AGG | 0.500028 | tig0012201:+51117 | Msa1351330:intron |
| AAAGCAAGACGACTACGACT+TGG | 0.536463 | tig0012201:+51687 | Msa1351330:CDS |
| ATCTAAGTCCAGGGAAAGCA+AGG | 0.538270 | tig0012201:+51499 | Msa1351330:CDS |
| AAGAATTATGCTGAACGGGT+GGG | 0.547191 | tig0012201:+51261 | Msa1351330:CDS |
| AGCATAATTCTTGTAATACT+CGG | 0.547475 | tig0012201:-51250 | None:intergenic |
| ACCATTTGCTTCAACGACAA+AGG | 0.554941 | tig0012201:-51616 | None:intergenic |
| CAAGAATTATGCTGAACGGG+TGG | 0.555569 | tig0012201:+51260 | Msa1351330:CDS |
| TTAGAACTCAATGATCAAGC+TGG | 0.558672 | tig0012201:+51567 | Msa1351330:CDS |
| TTGCTTCAACGACAAAGGAT+CGG | 0.564208 | tig0012201:-51611 | None:intergenic |
| AGACGACTACGACTTGGGAC+AGG | 0.570488 | tig0012201:+51693 | Msa1351330:CDS |
| TAGAACTCAATGATCAAGCT+GGG | 0.577189 | tig0012201:+51568 | Msa1351330:CDS |
| ATGTACTCAAGTTCAAGAAG+AGG | 0.581014 | tig0012201:+51736 | Msa1351330:CDS |
| ATTACAAGAATTATGCTGAA+CGG | 0.604383 | tig0012201:+51256 | Msa1351330:CDS |
| AAGAAGAAACACCTTGTGAT+GGG | 0.621474 | tig0012201:+51199 | Msa1351330:CDS |
| ATATAGGGGCACAAATGAAG+AGG | 0.627813 | tig0012201:+51541 | Msa1351330:CDS |
| GAAGAAGAAACACCTTGTGA+TGG | 0.629834 | tig0012201:+51198 | Msa1351330:CDS |
| TAGATCGAACAAGAATATAG+GGG | 0.631587 | tig0012201:+51527 | Msa1351330:CDS |
| CCGAATGACATCCCATCACA+AGG | 0.631658 | tig0012201:-51210 | None:intergenic |
| TAGGGGCACAAATGAAGAGG+AGG | 0.634884 | tig0012201:+51544 | Msa1351330:CDS |
| ATAATCATGATCTAAGTCCA+GGG | 0.638934 | tig0012201:+51490 | Msa1351330:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATAAGTTCAAAAAA+AGG | + | tig0012201:51294-51313 | Msa1351330:CDS | 10.0% |
| !! | AAAAAAATAAGTTCAAAAAA+AGG | + | tig0012201:51294-51313 | Msa1351330:CDS | 10.0% |
| !! | TAAATGAAAAATCAATCAAT+CGG | - | tig0012201:51056-51075 | None:intergenic | 15.0% |
| !! | TAAATGAAAAATCAATCAAT+CGG | - | tig0012201:51056-51075 | None:intergenic | 15.0% |
| !!! | TGTTTTTATAGATCATTAGT+AGG | + | tig0012201:51021-51040 | Msa1351330:intron | 20.0% |
| !! | CTGTGTTAGTTAATTAATAT+AGG | + | tig0012201:51081-51100 | Msa1351330:intron | 20.0% |
| !!! | TGTTTTTATAGATCATTAGT+AGG | + | tig0012201:51021-51040 | Msa1351330:intron | 20.0% |
| !! | CTGTGTTAGTTAATTAATAT+AGG | + | tig0012201:51081-51100 | Msa1351330:intron | 20.0% |
| ! | ATTTGAGTCTATTGATGAAT+TGG | + | tig0012201:51140-51159 | Msa1351330:CDS | 25.0% |
| ! | AATGATTGTTTAGAAGCAAA+TGG | + | tig0012201:51168-51187 | Msa1351330:CDS | 25.0% |
| ! | AGCATAATTCTTGTAATACT+CGG | - | tig0012201:51253-51272 | None:intergenic | 25.0% |
| ! | ATTACAAGAATTATGCTGAA+CGG | + | tig0012201:51256-51275 | Msa1351330:CDS | 25.0% |
| ! | AATGCGTGTATTTATTTAGA+TGG | + | tig0012201:51435-51454 | Msa1351330:CDS | 25.0% |
| ! | TTTAGATCGAACAAGAATAT+AGG | + | tig0012201:51525-51544 | Msa1351330:CDS | 25.0% |
| ! | TTAGATCGAACAAGAATATA+GGG | + | tig0012201:51526-51545 | Msa1351330:CDS | 25.0% |
| ! | ATTTGAGTCTATTGATGAAT+TGG | + | tig0012201:51140-51159 | Msa1351330:CDS | 25.0% |
| ! | AATGATTGTTTAGAAGCAAA+TGG | + | tig0012201:51168-51187 | Msa1351330:CDS | 25.0% |
| ! | AGCATAATTCTTGTAATACT+CGG | - | tig0012201:51253-51272 | None:intergenic | 25.0% |
| ! | ATTACAAGAATTATGCTGAA+CGG | + | tig0012201:51256-51275 | Msa1351330:CDS | 25.0% |
| ! | AATGCGTGTATTTATTTAGA+TGG | + | tig0012201:51435-51454 | Msa1351330:CDS | 25.0% |
| ! | TTTAGATCGAACAAGAATAT+AGG | + | tig0012201:51525-51544 | Msa1351330:CDS | 25.0% |
| ! | TTAGATCGAACAAGAATATA+GGG | + | tig0012201:51526-51545 | Msa1351330:CDS | 25.0% |
| ! | TTTGTTGTATTAGTGCAAGA+AGG | + | tig0012201:51117-51136 | Msa1351330:intron | 30.0% |
| TTACAAGAATTATGCTGAAC+GGG | + | tig0012201:51257-51276 | Msa1351330:CDS | 30.0% | |
| AAGTTCAAAAAAAGGAGATG+AGG | + | tig0012201:51302-51321 | Msa1351330:CDS | 30.0% | |
| AGTTCAAAAAAAGGAGATGA+GGG | + | tig0012201:51303-51322 | Msa1351330:CDS | 30.0% | |
| ATAATCATGATCTAAGTCCA+GGG | + | tig0012201:51490-51509 | Msa1351330:CDS | 30.0% | |
| TAGATCGAACAAGAATATAG+GGG | + | tig0012201:51527-51546 | Msa1351330:CDS | 30.0% | |
| GGTTATGAAAATCTCACATT+TGG | + | tig0012201:51636-51655 | Msa1351330:CDS | 30.0% | |
| ! | TTTGTTGTATTAGTGCAAGA+AGG | + | tig0012201:51117-51136 | Msa1351330:intron | 30.0% |
| TTACAAGAATTATGCTGAAC+GGG | + | tig0012201:51257-51276 | Msa1351330:CDS | 30.0% | |
| AAGTTCAAAAAAAGGAGATG+AGG | + | tig0012201:51302-51321 | Msa1351330:CDS | 30.0% | |
| AGTTCAAAAAAAGGAGATGA+GGG | + | tig0012201:51303-51322 | Msa1351330:CDS | 30.0% | |
| ATAATCATGATCTAAGTCCA+GGG | + | tig0012201:51490-51509 | Msa1351330:CDS | 30.0% | |
| TAGATCGAACAAGAATATAG+GGG | + | tig0012201:51527-51546 | Msa1351330:CDS | 30.0% | |
| GGTTATGAAAATCTCACATT+TGG | + | tig0012201:51636-51655 | Msa1351330:CDS | 30.0% | |
| TGATACCCTTCACAAAAACA+AGG | + | tig0012201:50741-50760 | Msa1351330:CDS | 35.0% | |
| ! | TCAATCAGTCTTTGATTCGT+GGG | - | tig0012201:50804-50823 | None:intergenic | 35.0% |
| ! | TTCAATCAGTCTTTGATTCG+TGG | - | tig0012201:50805-50824 | None:intergenic | 35.0% |
| ATATGAGATCTGATTCACAG+AGG | - | tig0012201:50887-50906 | None:intergenic | 35.0% | |
| TGAATCAATGGATGTTGTGA+TGG | - | tig0012201:50939-50958 | None:intergenic | 35.0% | |
| GCTTTAGTGCTATGAATCAA+TGG | - | tig0012201:50951-50970 | None:intergenic | 35.0% | |
| AAGAAGAAACACCTTGTGAT+GGG | + | tig0012201:51199-51218 | Msa1351330:CDS | 35.0% | |
| GTTCAAAAAAAGGAGATGAG+GGG | + | tig0012201:51304-51323 | Msa1351330:CDS | 35.0% | |
| ! | TGCGTTTGAGTTATAGGATT+TGG | - | tig0012201:51399-51418 | None:intergenic | 35.0% |
| ! | TTACACTGCGTTTGAGTTAT+AGG | - | tig0012201:51405-51424 | None:intergenic | 35.0% |
| TATAACTCAAACGCAGTGTA+AGG | + | tig0012201:51404-51423 | Msa1351330:CDS | 35.0% | |
| CATAATCATGATCTAAGTCC+AGG | + | tig0012201:51489-51508 | Msa1351330:CDS | 35.0% | |
| TTAGAACTCAATGATCAAGC+TGG | + | tig0012201:51567-51586 | Msa1351330:CDS | 35.0% | |
| TAGAACTCAATGATCAAGCT+GGG | + | tig0012201:51568-51587 | Msa1351330:CDS | 35.0% | |
| ATGTACTCAAGTTCAAGAAG+AGG | + | tig0012201:51736-51755 | Msa1351330:CDS | 35.0% | |
| TGATACCCTTCACAAAAACA+AGG | + | tig0012201:50741-50760 | Msa1351330:CDS | 35.0% | |
| ! | TCAATCAGTCTTTGATTCGT+GGG | - | tig0012201:50804-50823 | None:intergenic | 35.0% |
| ! | TTCAATCAGTCTTTGATTCG+TGG | - | tig0012201:50805-50824 | None:intergenic | 35.0% |
| ATATGAGATCTGATTCACAG+AGG | - | tig0012201:50887-50906 | None:intergenic | 35.0% | |
| TGAATCAATGGATGTTGTGA+TGG | - | tig0012201:50939-50958 | None:intergenic | 35.0% | |
| GCTTTAGTGCTATGAATCAA+TGG | - | tig0012201:50951-50970 | None:intergenic | 35.0% | |
| AAGAAGAAACACCTTGTGAT+GGG | + | tig0012201:51199-51218 | Msa1351330:CDS | 35.0% | |
| GTTCAAAAAAAGGAGATGAG+GGG | + | tig0012201:51304-51323 | Msa1351330:CDS | 35.0% | |
| ! | TGCGTTTGAGTTATAGGATT+TGG | - | tig0012201:51399-51418 | None:intergenic | 35.0% |
| ! | TTACACTGCGTTTGAGTTAT+AGG | - | tig0012201:51405-51424 | None:intergenic | 35.0% |
| TATAACTCAAACGCAGTGTA+AGG | + | tig0012201:51404-51423 | Msa1351330:CDS | 35.0% | |
| CATAATCATGATCTAAGTCC+AGG | + | tig0012201:51489-51508 | Msa1351330:CDS | 35.0% | |
| TTAGAACTCAATGATCAAGC+TGG | + | tig0012201:51567-51586 | Msa1351330:CDS | 35.0% | |
| TAGAACTCAATGATCAAGCT+GGG | + | tig0012201:51568-51587 | Msa1351330:CDS | 35.0% | |
| ATGTACTCAAGTTCAAGAAG+AGG | + | tig0012201:51736-51755 | Msa1351330:CDS | 35.0% | |
| !!! | CGTAGCCTTGTTTTTGTGAA+GGG | - | tig0012201:50749-50768 | None:intergenic | 40.0% |
| !!! | ACGTAGCCTTGTTTTTGTGA+AGG | - | tig0012201:50750-50769 | None:intergenic | 40.0% |
| TGGGAAAGAGGAAACAATTG+CGG | - | tig0012201:50785-50804 | None:intergenic | 40.0% | |
| AGCAGAAACAGAGTTATGTG+AGG | - | tig0012201:50914-50933 | None:intergenic | 40.0% | |
| GAAGAAGAAACACCTTGTGA+TGG | + | tig0012201:51198-51217 | Msa1351330:CDS | 40.0% | |
| GATGTCATTCGGATCTGAAA+AGG | + | tig0012201:51221-51240 | Msa1351330:CDS | 40.0% | |
| AAGAATTATGCTGAACGGGT+GGG | + | tig0012201:51261-51280 | Msa1351330:CDS | 40.0% | |
| CTAAAATACCTTGCTTTCCC+TGG | - | tig0012201:51510-51529 | None:intergenic | 40.0% | |
| ! | ATATAGGGGCACAAATGAAG+AGG | + | tig0012201:51541-51560 | Msa1351330:CDS | 40.0% |
| TTGCTTCAACGACAAAGGAT+CGG | - | tig0012201:51614-51633 | None:intergenic | 40.0% | |
| TCCTTTGTCGTTGAAGCAAA+TGG | + | tig0012201:51615-51634 | Msa1351330:CDS | 40.0% | |
| ACCATTTGCTTCAACGACAA+AGG | - | tig0012201:51619-51638 | None:intergenic | 40.0% | |
| !!! | CGTAGCCTTGTTTTTGTGAA+GGG | - | tig0012201:50749-50768 | None:intergenic | 40.0% |
| !!! | ACGTAGCCTTGTTTTTGTGA+AGG | - | tig0012201:50750-50769 | None:intergenic | 40.0% |
| TGGGAAAGAGGAAACAATTG+CGG | - | tig0012201:50785-50804 | None:intergenic | 40.0% | |
| AGCAGAAACAGAGTTATGTG+AGG | - | tig0012201:50914-50933 | None:intergenic | 40.0% | |
| GAAGAAGAAACACCTTGTGA+TGG | + | tig0012201:51198-51217 | Msa1351330:CDS | 40.0% | |
| GATGTCATTCGGATCTGAAA+AGG | + | tig0012201:51221-51240 | Msa1351330:CDS | 40.0% | |
| AAGAATTATGCTGAACGGGT+GGG | + | tig0012201:51261-51280 | Msa1351330:CDS | 40.0% | |
| CTAAAATACCTTGCTTTCCC+TGG | - | tig0012201:51510-51529 | None:intergenic | 40.0% | |
| ! | ATATAGGGGCACAAATGAAG+AGG | + | tig0012201:51541-51560 | Msa1351330:CDS | 40.0% |
| TTGCTTCAACGACAAAGGAT+CGG | - | tig0012201:51614-51633 | None:intergenic | 40.0% | |
| TCCTTTGTCGTTGAAGCAAA+TGG | + | tig0012201:51615-51634 | Msa1351330:CDS | 40.0% | |
| ACCATTTGCTTCAACGACAA+AGG | - | tig0012201:51619-51638 | None:intergenic | 40.0% | |
| AAAGAGGAAACAATTGCGGC+GGG | - | tig0012201:50781-50800 | None:intergenic | 45.0% | |
| GAAAGAGGAAACAATTGCGG+CGG | - | tig0012201:50782-50801 | None:intergenic | 45.0% | |
| ! | GTCTTTGATTCGTGGGAAAG+AGG | - | tig0012201:50797-50816 | None:intergenic | 45.0% |
| ! | CCTTGTGATGGGATGTCATT+CGG | + | tig0012201:51210-51229 | Msa1351330:CDS | 45.0% |
| CAAGAATTATGCTGAACGGG+TGG | + | tig0012201:51260-51279 | Msa1351330:CDS | 45.0% | |
| ATCTAAGTCCAGGGAAAGCA+AGG | + | tig0012201:51499-51518 | Msa1351330:CDS | 45.0% | |
| AAAGCAAGACGACTACGACT+TGG | + | tig0012201:51687-51706 | Msa1351330:CDS | 45.0% | |
| AAGCAAGACGACTACGACTT+GGG | + | tig0012201:51688-51707 | Msa1351330:CDS | 45.0% | |
| AAAGAGGAAACAATTGCGGC+GGG | - | tig0012201:50781-50800 | None:intergenic | 45.0% | |
| GAAAGAGGAAACAATTGCGG+CGG | - | tig0012201:50782-50801 | None:intergenic | 45.0% | |
| ! | GTCTTTGATTCGTGGGAAAG+AGG | - | tig0012201:50797-50816 | None:intergenic | 45.0% |
| ! | CCTTGTGATGGGATGTCATT+CGG | + | tig0012201:51210-51229 | Msa1351330:CDS | 45.0% |
| CAAGAATTATGCTGAACGGG+TGG | + | tig0012201:51260-51279 | Msa1351330:CDS | 45.0% | |
| ATCTAAGTCCAGGGAAAGCA+AGG | + | tig0012201:51499-51518 | Msa1351330:CDS | 45.0% | |
| AAAGCAAGACGACTACGACT+TGG | + | tig0012201:51687-51706 | Msa1351330:CDS | 45.0% | |
| AAGCAAGACGACTACGACTT+GGG | + | tig0012201:51688-51707 | Msa1351330:CDS | 45.0% | |
| CCGAATGACATCCCATCACA+AGG | - | tig0012201:51213-51232 | None:intergenic | 50.0% | |
| !! | TATGCTGAACGGGTGGGTTT+TGG | + | tig0012201:51267-51286 | Msa1351330:CDS | 50.0% |
| ! | TAGGGGCACAAATGAAGAGG+AGG | + | tig0012201:51544-51563 | Msa1351330:CDS | 50.0% |
| CCGAATGACATCCCATCACA+AGG | - | tig0012201:51213-51232 | None:intergenic | 50.0% | |
| !! | TATGCTGAACGGGTGGGTTT+TGG | + | tig0012201:51267-51286 | Msa1351330:CDS | 50.0% |
| ! | TAGGGGCACAAATGAAGAGG+AGG | + | tig0012201:51544-51563 | Msa1351330:CDS | 50.0% |
| ! | AGACGACTACGACTTGGGAC+AGG | + | tig0012201:51693-51712 | Msa1351330:CDS | 55.0% |
| ! | AGACGACTACGACTTGGGAC+AGG | + | tig0012201:51693-51712 | Msa1351330:CDS | 55.0% |
| GGAAACAATTGCGGCGGGAG+TGG | - | tig0012201:50776-50795 | None:intergenic | 60.0% | |
| GGAAACAATTGCGGCGGGAG+TGG | - | tig0012201:50776-50795 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0012201 | gene | 50740 | 51761 | 50740 | ID=Msa1351330;Name=Msa1351330 |
| tig0012201 | mRNA | 50740 | 51761 | 50740 | ID=Msa1351330-mRNA-1;Parent=Msa1351330;Name=Msa1351330-mRNA-1;_AED=0.52;_eAED=0.52;_QI=0|0|0|0.5|0|0.5|2|0|219 |
| tig0012201 | exon | 50740 | 50767 | 50740 | ID=Msa1351330-mRNA-1:exon:7678;Parent=Msa1351330-mRNA-1 |
| tig0012201 | exon | 51130 | 51761 | 51130 | ID=Msa1351330-mRNA-1:exon:7679;Parent=Msa1351330-mRNA-1 |
| tig0012201 | CDS | 50740 | 50767 | 50740 | ID=Msa1351330-mRNA-1:cds;Parent=Msa1351330-mRNA-1 |
| tig0012201 | CDS | 51130 | 51761 | 51130 | ID=Msa1351330-mRNA-1:cds;Parent=Msa1351330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
