Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1356380 | XP_013450683.2 | 94.918 | 610 | 30 | 1 | 1 | 610 | 4 | 612 | 0.0 | 1148 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1356380 | sp|Q9SZL6|MTEF6_ARATH | 30.351 | 313 | 180 | 6 | 284 | 592 | 46 | 324 | 8.52e-35 | 137 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1356380 | A0A072U5S3 | 94.918 | 610 | 30 | 1 | 1 | 610 | 1 | 609 | 0.0 | 1147 |
Gene ID | Type | Classification |
---|---|---|
Msa1356380 | TR | mTERF |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1356380 | MtrunA17_Chr6g0448821 | 96.825 | 378 | 12 | 0 | 233 | 610 | 1 | 378 | 0.0 | 749 |
Msa1356380 | MtrunA17_Chr6g0448831 | 90.503 | 179 | 16 | 1 | 1 | 179 | 4 | 181 | 5.86e-99 | 299 |
Msa1356380 | MtrunA17_Chr4g0043941 | 27.331 | 311 | 190 | 4 | 284 | 592 | 46 | 322 | 9.76e-36 | 137 |
Msa1356380 | MtrunA17_Chr4g0034981 | 28.972 | 321 | 224 | 4 | 271 | 588 | 266 | 585 | 4.78e-34 | 137 |
Msa1356380 | MtrunA17_Chr2g0294671 | 30.859 | 256 | 172 | 3 | 334 | 588 | 231 | 482 | 2.30e-31 | 127 |
Msa1356380 | MtrunA17_Chr5g0417641 | 28.807 | 243 | 166 | 4 | 350 | 590 | 57 | 294 | 1.21e-25 | 107 |
Msa1356380 | MtrunA17_Chr1g0212691 | 26.269 | 335 | 241 | 6 | 264 | 594 | 124 | 456 | 9.26e-25 | 108 |
Msa1356380 | MtrunA17_Chr5g0428941 | 23.698 | 384 | 241 | 7 | 209 | 588 | 147 | 482 | 3.83e-24 | 106 |
Msa1356380 | MtrunA17_Chr5g0428941 | 26.009 | 223 | 156 | 5 | 351 | 568 | 140 | 358 | 7.91e-14 | 74.3 |
Msa1356380 | MtrunA17_Chr2g0311181 | 28.934 | 197 | 133 | 2 | 371 | 566 | 87 | 277 | 9.96e-22 | 96.7 |
Msa1356380 | MtrunA17_Chr5g0445491 | 26.911 | 327 | 184 | 6 | 282 | 595 | 194 | 478 | 4.27e-20 | 94.0 |
Msa1356380 | MtrunA17_Chr2g0304101 | 25.439 | 228 | 158 | 3 | 367 | 588 | 83 | 304 | 1.58e-18 | 87.0 |
Msa1356380 | MtrunA17_Chr7g0250261 | 30.000 | 160 | 107 | 4 | 435 | 592 | 127 | 283 | 3.01e-16 | 79.7 |
Msa1356380 | MtrunA17_Chr0c29g0494001 | 30.000 | 160 | 107 | 4 | 435 | 592 | 127 | 283 | 3.01e-16 | 79.7 |
Msa1356380 | MtrunA17_Chr8g0391881 | 22.256 | 328 | 199 | 8 | 282 | 565 | 59 | 374 | 2.23e-13 | 72.0 |
Msa1356380 | MtrunA17_Chr3g0094341 | 24.176 | 182 | 118 | 4 | 393 | 561 | 27 | 201 | 1.47e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1356380 | AT1G78930.1 | 50.766 | 522 | 248 | 5 | 79 | 598 | 70 | 584 | 1.73e-179 | 521 |
Msa1356380 | AT4G38160.2 | 29.503 | 322 | 188 | 7 | 284 | 601 | 46 | 332 | 6.44e-36 | 139 |
Msa1356380 | AT4G38160.4 | 30.351 | 313 | 180 | 6 | 284 | 592 | 46 | 324 | 8.66e-36 | 137 |
Msa1356380 | AT4G38160.1 | 30.351 | 313 | 180 | 6 | 284 | 592 | 46 | 324 | 8.66e-36 | 137 |
Msa1356380 | AT4G38160.3 | 30.124 | 322 | 186 | 7 | 284 | 601 | 46 | 332 | 1.79e-35 | 138 |
Msa1356380 | AT2G21710.1 | 27.389 | 314 | 224 | 4 | 278 | 588 | 280 | 592 | 4.24e-31 | 129 |
Msa1356380 | AT4G14605.2 | 28.358 | 268 | 180 | 5 | 322 | 588 | 211 | 467 | 2.66e-30 | 125 |
Msa1356380 | AT4G14605.1 | 28.358 | 268 | 180 | 5 | 322 | 588 | 211 | 467 | 2.66e-30 | 125 |
Msa1356380 | AT2G03050.2 | 31.687 | 243 | 156 | 6 | 350 | 588 | 33 | 269 | 2.39e-28 | 115 |
Msa1356380 | AT2G03050.1 | 31.687 | 243 | 156 | 6 | 350 | 588 | 32 | 268 | 2.45e-28 | 115 |
Msa1356380 | AT2G36000.2 | 30.942 | 223 | 143 | 5 | 371 | 588 | 91 | 307 | 1.48e-23 | 102 |
Msa1356380 | AT2G36000.1 | 30.942 | 223 | 143 | 5 | 371 | 588 | 91 | 307 | 2.35e-23 | 102 |
Msa1356380 | AT4G02990.2 | 24.128 | 344 | 219 | 8 | 283 | 588 | 151 | 490 | 1.59e-22 | 102 |
Msa1356380 | AT4G02990.1 | 24.128 | 344 | 219 | 8 | 283 | 588 | 151 | 490 | 1.59e-22 | 102 |
Msa1356380 | AT5G55580.2 | 26.877 | 253 | 176 | 5 | 351 | 595 | 114 | 365 | 1.69e-21 | 97.4 |
Msa1356380 | AT2G21710.2 | 25.180 | 278 | 204 | 4 | 278 | 552 | 280 | 556 | 2.59e-21 | 98.6 |
Msa1356380 | AT2G21710.2 | 22.368 | 228 | 166 | 3 | 347 | 566 | 278 | 502 | 8.51e-13 | 71.6 |
Msa1356380 | AT2G44020.1 | 24.776 | 335 | 246 | 6 | 264 | 594 | 129 | 461 | 5.53e-21 | 97.1 |
Msa1356380 | AT5G55580.1 | 26.877 | 253 | 176 | 5 | 351 | 595 | 220 | 471 | 9.24e-21 | 96.3 |
Msa1356380 | AT2G21710.3 | 24.910 | 277 | 204 | 4 | 278 | 551 | 280 | 555 | 1.06e-20 | 96.7 |
Msa1356380 | AT2G21710.3 | 22.368 | 228 | 166 | 3 | 347 | 566 | 278 | 502 | 4.71e-13 | 72.4 |
Msa1356380 | AT2G34620.1 | 26.339 | 224 | 161 | 3 | 367 | 588 | 69 | 290 | 1.83e-19 | 89.7 |
Msa1356380 | AT1G61970.2 | 27.508 | 309 | 212 | 9 | 265 | 570 | 70 | 369 | 2.03e-18 | 88.6 |
Msa1356380 | AT1G61970.7 | 27.508 | 309 | 212 | 9 | 265 | 570 | 70 | 369 | 2.03e-18 | 88.6 |
Msa1356380 | AT1G61970.6 | 27.508 | 309 | 212 | 9 | 265 | 570 | 70 | 369 | 2.03e-18 | 88.6 |
Msa1356380 | AT1G61970.3 | 27.508 | 309 | 212 | 9 | 265 | 570 | 70 | 369 | 2.03e-18 | 88.6 |
Msa1356380 | AT1G61970.5 | 27.508 | 309 | 212 | 9 | 265 | 570 | 70 | 369 | 2.03e-18 | 88.6 |
Msa1356380 | AT1G61970.4 | 27.508 | 309 | 212 | 9 | 265 | 570 | 70 | 369 | 2.03e-18 | 88.6 |
Msa1356380 | AT1G61970.1 | 27.508 | 309 | 212 | 9 | 265 | 570 | 70 | 369 | 2.03e-18 | 88.6 |
Msa1356380 | AT3G18870.1 | 27.607 | 163 | 115 | 2 | 430 | 592 | 113 | 272 | 3.38e-17 | 82.8 |
Msa1356380 | AT1G62110.1 | 25.484 | 310 | 220 | 8 | 264 | 570 | 105 | 406 | 1.64e-15 | 79.7 |
Msa1356380 | AT1G61980.3 | 25.559 | 313 | 213 | 10 | 265 | 570 | 70 | 369 | 3.01e-15 | 78.6 |
Msa1356380 | AT1G61980.2 | 25.559 | 313 | 213 | 10 | 265 | 570 | 70 | 369 | 3.01e-15 | 78.6 |
Msa1356380 | AT1G61980.1 | 25.559 | 313 | 213 | 10 | 265 | 570 | 70 | 369 | 3.01e-15 | 78.6 |
Msa1356380 | AT1G62120.1 | 25.170 | 294 | 206 | 8 | 281 | 569 | 90 | 374 | 3.92e-15 | 78.6 |
Msa1356380 | AT1G61990.2 | 24.138 | 406 | 270 | 12 | 211 | 601 | 2 | 384 | 5.65e-15 | 77.8 |
Msa1356380 | AT1G61990.1 | 24.138 | 406 | 270 | 12 | 211 | 601 | 2 | 384 | 5.65e-15 | 77.8 |
Msa1356380 | AT1G62010.1 | 32.386 | 176 | 114 | 4 | 394 | 569 | 182 | 352 | 2.26e-14 | 75.9 |
Msa1356380 | AT1G62085.1 | 29.310 | 174 | 109 | 5 | 428 | 601 | 270 | 429 | 1.21e-13 | 73.9 |
Msa1356380 | AT1G62085.2 | 29.310 | 174 | 109 | 5 | 428 | 601 | 270 | 429 | 1.21e-13 | 73.9 |
Msa1356380 | AT1G61960.1 | 21.981 | 414 | 255 | 14 | 209 | 569 | 6 | 404 | 3.36e-13 | 72.4 |
Msa1356380 | AT5G55580.3 | 27.333 | 150 | 106 | 3 | 389 | 535 | 223 | 372 | 6.22e-12 | 68.2 |
Msa1356380 | AT3G46950.1 | 24.868 | 378 | 248 | 13 | 204 | 570 | 48 | 400 | 8.57e-12 | 68.2 |
Msa1356380 | AT5G23930.1 | 32.479 | 117 | 77 | 2 | 454 | 570 | 288 | 402 | 3.77e-11 | 66.2 |
Find 147 sgRNAs with CRISPR-Local
Find 611 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGAGAAGGAAATTGCATTTA+TGG | 0.115303 | tig0015627:-32838 | Msa1356380:CDS |
TGTTATGTTCTTTGAAAATA+TGG | 0.137547 | tig0015627:-33358 | Msa1356380:CDS |
TTCACAAAGTATTCTCAATT+TGG | 0.141339 | tig0015627:-40503 | Msa1356380:CDS |
GATGCCAAAATTAGAATTTC+TGG | 0.144550 | tig0015627:-32769 | Msa1356380:CDS |
TTCACCAGAAATTCTAATTT+TGG | 0.159132 | tig0015627:+32765 | None:intergenic |
CTGCGGGGATCCCAATATTT+TGG | 0.192705 | tig0015627:+39751 | None:intergenic |
AGAATTTGCTGCTGAATTTA+TGG | 0.206246 | tig0015627:-32595 | Msa1356380:CDS |
TACTACAACTGAAAATTAAA+AGG | 0.236426 | tig0015627:+32444 | None:intergenic |
CTGGATATTCTCCAAAATAT+TGG | 0.247372 | tig0015627:-39762 | Msa1356380:CDS |
TAGTGTGAGCGGGAGGAAAA+AGG | 0.267324 | tig0015627:+40009 | None:intergenic |
GGTAGAAAGTGTTAGGGATT+TGG | 0.286024 | tig0015627:-40270 | Msa1356380:CDS |
GCACGGTCTGTCCATGTCTT+TGG | 0.290233 | tig0015627:+37561 | None:intergenic |
CAAAAGACAACCTCAACTAT+TGG | 0.292015 | tig0015627:-37535 | Msa1356380:CDS |
TACCTTCACGGAATATAAAA+AGG | 0.292325 | tig0015627:+38692 | None:intergenic |
TCAACATTCCAGAGCAAAAT+AGG | 0.293006 | tig0015627:+39696 | None:intergenic |
AGACGTTCATATTGTCGTTC+TGG | 0.296095 | tig0015627:-40431 | Msa1356380:CDS |
TGTAAATATCATTACCTTGT+AGG | 0.319913 | tig0015627:-32524 | Msa1356380:exon |
TGCGTTTCCACATAAGATTC+AGG | 0.320950 | tig0015627:-40561 | Msa1356380:CDS |
ATGACAAAGCATGCTTGATT+TGG | 0.326385 | tig0015627:-32400 | Msa1356380:three_prime_UTR |
AGAAGATAAAACCAAGATAT+CGG | 0.329241 | tig0015627:-32677 | Msa1356380:CDS |
GAATATCGAATGTAGCTTAA+AGG | 0.330400 | tig0015627:-32640 | Msa1356380:CDS |
ACATGTTGGTAGAAAGTGTT+AGG | 0.342505 | tig0015627:-40277 | Msa1356380:CDS |
TCACAAAGTATTCTCAATTT+GGG | 0.343251 | tig0015627:-40502 | Msa1356380:CDS |
ATTGAGTTCCTTAGGAGAAT+TGG | 0.350307 | tig0015627:-33249 | Msa1356380:CDS |
ATGTCAGACACAAGTAGTTC+TGG | 0.365444 | tig0015627:+33186 | None:intergenic |
AGAGCAAGATTGAGTTCCTT+AGG | 0.365560 | tig0015627:-33257 | Msa1356380:CDS |
TAATCACATCTCATCTATAC+TGG | 0.369786 | tig0015627:-39781 | Msa1356380:CDS |
TTCTAAAGCTTACATTCCTT+TGG | 0.370275 | tig0015627:-33223 | Msa1356380:CDS |
TGGATATTCTCCAAAATATT+GGG | 0.384384 | tig0015627:-39761 | Msa1356380:CDS |
TCGCATCCCCAACATAATAT+TGG | 0.384825 | tig0015627:-39727 | Msa1356380:CDS |
GGAAAAGCCAATATTATGTT+GGG | 0.385050 | tig0015627:+39720 | None:intergenic |
AAATACCTGTAGAAAGTCTT+CGG | 0.386329 | tig0015627:+37398 | None:intergenic |
CATATTGTCGTTCTGGGATG+AGG | 0.397363 | tig0015627:-40424 | Msa1356380:CDS |
AGTTACCCGCCTCATCCATT+TGG | 0.398642 | tig0015627:-40831 | Msa1356380:five_prime_UTR |
AAGCATTCAAGAGAACTATA+AGG | 0.404306 | tig0015627:-38724 | Msa1356380:CDS |
GAATTTGCTGCTGAATTTAT+GGG | 0.409909 | tig0015627:-32594 | Msa1356380:CDS |
GACGTTCATATTGTCGTTCT+GGG | 0.411201 | tig0015627:-40430 | Msa1356380:CDS |
AATACCTGTAGAAAGTCTTC+GGG | 0.414049 | tig0015627:+37399 | None:intergenic |
CCTTTCAGAACCCGATATCT+TGG | 0.415637 | tig0015627:+32666 | None:intergenic |
TCACTTCTCTTCTTCCATGC+TGG | 0.415823 | tig0015627:-40246 | Msa1356380:CDS |
AAAAGACAACCTCAACTATT+GGG | 0.416730 | tig0015627:-37534 | Msa1356380:CDS |
TTGAGAATACTTTGTGAAAG+TGG | 0.428065 | tig0015627:+40508 | None:intergenic |
AACTAGCAAGCTGAAGTTGA+TGG | 0.435075 | tig0015627:-37505 | Msa1356380:CDS |
AGAAAGCAATTGGTGTGAAT+TGG | 0.437050 | tig0015627:+40599 | None:intergenic |
TCTACTTGGGTACAGCATAA+AGG | 0.438005 | tig0015627:-32799 | Msa1356380:CDS |
ACTCCTTCAAACTAGAGTTC+TGG | 0.442934 | tig0015627:-39673 | Msa1356380:CDS |
GTTATGTTCTTTGAAAATAT+GGG | 0.445605 | tig0015627:-33357 | Msa1356380:CDS |
TTTCCTCTGAACTCCTAGTT+CGG | 0.462041 | tig0015627:+37470 | None:intergenic |
GGGACACAGTAGTCTCTGAT+TGG | 0.463347 | tig0015627:-40403 | Msa1356380:CDS |
AGGCCAGAACTCTAGTTTGA+AGG | 0.466029 | tig0015627:+39670 | None:intergenic |
TGCTATTGATTCGGATTCCT+CGG | 0.469322 | tig0015627:+40322 | None:intergenic |
TCAACTTGAACTTCAACTAC+AGG | 0.473500 | tig0015627:-40196 | Msa1356380:CDS |
GCTGCTGAATTTATGGGTGT+TGG | 0.474476 | tig0015627:-32588 | Msa1356380:CDS |
GACAAGTGGAAGAAAGCAAT+TGG | 0.476718 | tig0015627:+40589 | None:intergenic |
AATTTGGCGTACCTGGTTCA+AGG | 0.477280 | tig0015627:+39650 | None:intergenic |
TGAGTTTGATGCTATTGATT+CGG | 0.480221 | tig0015627:+40313 | None:intergenic |
GAAGATAAAACCAAGATATC+GGG | 0.481026 | tig0015627:-32676 | Msa1356380:CDS |
ATGTGTAGACGAACTCCAAA+TGG | 0.481783 | tig0015627:+40816 | None:intergenic |
AGGAAAAGCCAATATTATGT+TGG | 0.485798 | tig0015627:+39719 | None:intergenic |
AGTCTCTGATTGGGAACTGC+AGG | 0.486091 | tig0015627:-40393 | Msa1356380:CDS |
ATGTTGGGGATGCGATCTGC+GGG | 0.490612 | tig0015627:+39735 | None:intergenic |
TGAGAATACTTTGTGAAAGT+GGG | 0.493211 | tig0015627:+40509 | None:intergenic |
CATTCTAGGTTCCAAAGACA+TGG | 0.510075 | tig0015627:-37572 | Msa1356380:intron |
CGAACATCCTGAATCTTATG+TGG | 0.510176 | tig0015627:+40554 | None:intergenic |
ACACTACAATCATACCTTCA+CGG | 0.512801 | tig0015627:+38680 | None:intergenic |
CATCTAGTGAAATTGATAAG+TGG | 0.514953 | tig0015627:+39940 | None:intergenic |
GGTTTCTCTAGAAATTCCAT+TGG | 0.517590 | tig0015627:-40658 | Msa1356380:five_prime_UTR |
ATCTAGTGAAATTGATAAGT+GGG | 0.520056 | tig0015627:+39941 | None:intergenic |
AGTGAATAGCTAAAATACCT+AGG | 0.521625 | tig0015627:+32705 | None:intergenic |
CAGCTTATCATGTGAAGACA+AGG | 0.524806 | tig0015627:+32545 | None:intergenic |
TAGAAACACCAATTCTCCTA+AGG | 0.525753 | tig0015627:+33241 | None:intergenic |
CTAGCTTACTTAGAGAGTCT+CGG | 0.531011 | tig0015627:-40128 | Msa1356380:CDS |
ACAAATGGGTGTGTCGGCCG+AGG | 0.532280 | tig0015627:-40339 | Msa1356380:CDS |
GGACACAGTAGTCTCTGATT+GGG | 0.532317 | tig0015627:-40402 | Msa1356380:CDS |
CTTCCTCAATGAATGTCGCC+AGG | 0.535977 | tig0015627:-40094 | Msa1356380:CDS |
GTAGATCAGTTTGCCGAACT+AGG | 0.537040 | tig0015627:-37483 | Msa1356380:CDS |
TCTTCAACAAATGGGTGTGT+CGG | 0.540277 | tig0015627:-40345 | Msa1356380:CDS |
GAGCAACATGTGAGAGAGGC+GGG | 0.540609 | tig0015627:+40856 | None:intergenic |
ACCAACATGTTGAGATATGC+TGG | 0.540717 | tig0015627:+40290 | None:intergenic |
ATAACAATACCGTTGAGGTA+AGG | 0.541814 | tig0015627:+33155 | None:intergenic |
TGAGGCGAATATTCTTGATA+AGG | 0.543511 | tig0015627:+39970 | None:intergenic |
GATGCTAATGCTAATGATGT+TGG | 0.543989 | tig0015627:-40224 | Msa1356380:CDS |
TAACTTTGTTAATGAGAGAC+GGG | 0.545763 | tig0015627:+40048 | None:intergenic |
AATTCATATTATCAATCCAA+TGG | 0.545885 | tig0015627:+40642 | None:intergenic |
ATGTAGCTTAAAGGATATGC+TGG | 0.546025 | tig0015627:-32631 | Msa1356380:CDS |
TAGAGTTCTGGCCTTGAACC+AGG | 0.547091 | tig0015627:-39661 | Msa1356380:intron |
GTAACTTTGTTAATGAGAGA+CGG | 0.550712 | tig0015627:+40047 | None:intergenic |
CTTCACATTGCAGCTCTCAA+AGG | 0.551295 | tig0015627:-40164 | Msa1356380:CDS |
ATAGTGTACTTTATGAAGCT+AGG | 0.563671 | tig0015627:-32867 | Msa1356380:CDS |
TGATGAGTAGTGTGAGCGGG+AGG | 0.570194 | tig0015627:+40002 | None:intergenic |
TAGTGATGAGTAGTGTGAGC+GGG | 0.571600 | tig0015627:+39999 | None:intergenic |
GATATCGGGTTCTGAAAGGA+AGG | 0.571698 | tig0015627:-32662 | Msa1356380:CDS |
CCAAGATATCGGGTTCTGAA+AGG | 0.573170 | tig0015627:-32666 | Msa1356380:CDS |
GTGAATAGCTAAAATACCTA+GGG | 0.575252 | tig0015627:+32706 | None:intergenic |
CATGTTGGTAGAAAGTGTTA+GGG | 0.576782 | tig0015627:-40276 | Msa1356380:CDS |
GGATACTTTCTGATAACCAA+AGG | 0.580282 | tig0015627:+33207 | None:intergenic |
ATATTGTCGTTCTGGGATGA+GGG | 0.584409 | tig0015627:-40423 | Msa1356380:CDS |
CAACTTGAACTTCAACTACA+GGG | 0.584755 | tig0015627:-40195 | Msa1356380:CDS |
GTTGAACAACCCAATAGTTG+AGG | 0.591010 | tig0015627:+37525 | None:intergenic |
TTCTGGTGAACTCAATGAAG+AGG | 0.597466 | tig0015627:-32752 | Msa1356380:CDS |
TTAACAAAACCTTACCTCAA+CGG | 0.600806 | tig0015627:-33164 | Msa1356380:intron |
AGACGGGAGGGTGTCAGCGG+AGG | 0.601376 | tig0015627:+40064 | None:intergenic |
CGAACTCCAAATGGATGAGG+CGG | 0.602071 | tig0015627:+40825 | None:intergenic |
GAAGCCCGAAGACTTTCTAC+AGG | 0.604401 | tig0015627:-37403 | Msa1356380:intron |
GAAATGATTCAATGAAGCAA+CGG | 0.605221 | tig0015627:+39829 | None:intergenic |
GGTGAACTCAATGAAGAGGC+CGG | 0.608350 | tig0015627:-32748 | Msa1356380:CDS |
TTGATAAGTGGGTCATGATG+AGG | 0.611276 | tig0015627:+39952 | None:intergenic |
GAACTCCAAATGGATGAGGC+GGG | 0.612242 | tig0015627:+40826 | None:intergenic |
GAAGCTAGGACTTTCAGAGA+AGG | 0.613527 | tig0015627:-32853 | Msa1356380:CDS |
AGACGAACTCCAAATGGATG+AGG | 0.614003 | tig0015627:+40822 | None:intergenic |
TATGTTGGGGATGCGATCTG+CGG | 0.616027 | tig0015627:+39734 | None:intergenic |
TGTTGATGCTAAAATATCCG+TGG | 0.618761 | tig0015627:-38758 | Msa1356380:CDS |
TTTGTTAATGAGAGACGGGA+GGG | 0.619589 | tig0015627:+40052 | None:intergenic |
GAGAGACGGGAGGGTGTCAG+CGG | 0.621038 | tig0015627:+40061 | None:intergenic |
GAAAAGGTTCAAGCAAGGCG+TGG | 0.622427 | tig0015627:-39888 | Msa1356380:CDS |
GAAGAGGCCGGTACGAGACG+TGG | 0.624003 | tig0015627:-32736 | Msa1356380:CDS |
TGATAAGATGAATTCCTACA+AGG | 0.624865 | tig0015627:+32510 | None:intergenic |
TAGCTCACCACGTCTCGTAC+CGG | 0.626755 | tig0015627:+32729 | None:intergenic |
TTGCCGAACTAGGAGTTCAG+AGG | 0.629209 | tig0015627:-37473 | Msa1356380:CDS |
GAGAATACTTTGTGAAAGTG+GGG | 0.630001 | tig0015627:+40510 | None:intergenic |
GAAAAGCCAATATTATGTTG+GGG | 0.630240 | tig0015627:+39721 | None:intergenic |
GTTGATGCTAAAATATCCGT+GGG | 0.632158 | tig0015627:-38757 | Msa1356380:CDS |
ACCAGCATATCTCAACATGT+TGG | 0.632521 | tig0015627:-40291 | Msa1356380:CDS |
GAGACGTGGTGAGCTACCCT+AGG | 0.632788 | tig0015627:-32722 | Msa1356380:CDS |
GTCAGCGGAGGATATATACC+TGG | 0.634286 | tig0015627:+40076 | None:intergenic |
ATTAGCATTAGCATCCAGCA+TGG | 0.634999 | tig0015627:+40232 | None:intergenic |
CTTAGAGCAACATGTGAGAG+AGG | 0.638024 | tig0015627:+40852 | None:intergenic |
TCTGATTGGGAACTGCAGGA+AGG | 0.638520 | tig0015627:-40389 | Msa1356380:CDS |
GAATCATAACAATACCGTTG+AGG | 0.640993 | tig0015627:+33150 | None:intergenic |
GGCTTCTGTAATAATAGCTG+AGG | 0.649008 | tig0015627:+37420 | None:intergenic |
AGAGCAACATGTGAGAGAGG+CGG | 0.649017 | tig0015627:+40855 | None:intergenic |
ATACCTGGCGACATTCATTG+AGG | 0.650039 | tig0015627:+40091 | None:intergenic |
TTTATGCTGTACCCAAGTAG+AGG | 0.651825 | tig0015627:+32801 | None:intergenic |
ACATTCCAGAGCAAAATAGG+AGG | 0.652429 | tig0015627:+39699 | None:intergenic |
CTTTGTTAATGAGAGACGGG+AGG | 0.652659 | tig0015627:+40051 | None:intergenic |
GCAGCTCTCAAAGGTGACAA+CGG | 0.668388 | tig0015627:-40155 | Msa1356380:CDS |
AAGGTTCAAGCAAGGCGTGG+AGG | 0.673259 | tig0015627:-39885 | Msa1356380:CDS |
AAGCAGCATCTTGAGAAGCG+AGG | 0.673782 | tig0015627:+39853 | None:intergenic |
GGAAACGCAGCATAGACAAG+TGG | 0.684763 | tig0015627:+40575 | None:intergenic |
ATAGTGATGAGTAGTGTGAG+CGG | 0.686698 | tig0015627:+39998 | None:intergenic |
CATTCAAGAGAACTATAAGG+AGG | 0.687484 | tig0015627:-38721 | Msa1356380:CDS |
AGCTTATCATGTGAAGACAA+GGG | 0.692707 | tig0015627:+32546 | None:intergenic |
ACTTGGGTACAGCATAAAGG+AGG | 0.694799 | tig0015627:-32796 | Msa1356380:CDS |
ATGCTTGTAGATAGAACCCA+CGG | 0.695925 | tig0015627:+38741 | None:intergenic |
TGTTGGGGATGCGATCTGCG+GGG | 0.717165 | tig0015627:+39736 | None:intergenic |
AGTGATAACAAAAGTATACG+AGG | 0.730910 | tig0015627:+39807 | None:intergenic |
TTATCATGTGAAGACAAGGG+AGG | 0.739674 | tig0015627:+32549 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAATATTAAAATATTAATT+GGG | - | tig0015627:34920-34939 | Msa1356380:intron | 0.0% |
!! | ATTATTAACTTATTAGTTAA+AGG | + | tig0015627:34422-34441 | None:intergenic | 10.0% |
!!! | TTTGAAAAATAAAATGTTTT+TGG | - | tig0015627:35547-35566 | Msa1356380:intron | 10.0% |
!!! | TTAAATTAAATGATGTTTTA+AGG | - | tig0015627:38898-38917 | Msa1356380:intron | 10.0% |
!!! | ATTTGTTTATTGAAATTTTA+AGG | + | tig0015627:39628-39647 | None:intergenic | 10.0% |
!! | TATTATAATTAAGATCATGT+TGG | + | tig0015627:34389-34408 | None:intergenic | 15.0% |
!!! | TTAAAGAAAAATGTGTTATT+AGG | - | tig0015627:35004-35023 | Msa1356380:intron | 15.0% |
!! | AATAAATTGGATTCTTAATA+AGG | + | tig0015627:35505-35524 | None:intergenic | 15.0% |
!! | TAATAATATTGTTTCATTCT+AGG | - | tig0015627:35655-35674 | Msa1356380:intron | 15.0% |
!! | ATATAAAGTAGAGAAAAATT+TGG | - | tig0015627:35960-35979 | Msa1356380:intron | 15.0% |
!! | TTAATTAGAATTACATTGTA+AGG | - | tig0015627:39505-39524 | Msa1356380:intron | 15.0% |
!!! | TATTTTTAAATAACTGCAAA+TGG | - | tig0015627:39784-39803 | Msa1356380:CDS | 15.0% |
!!! | ATTTTTAAATAACTGCAAAT+GGG | - | tig0015627:39785-39804 | Msa1356380:CDS | 15.0% |
!!! | GTTTTGATAAAGAAAATATT+GGG | - | tig0015627:39906-39925 | Msa1356380:CDS | 15.0% |
!! | AATTCATATTATCAATCCAA+TGG | + | tig0015627:32602-32621 | None:intergenic | 20.0% |
!! | AATCTTTAGATCTTTCTTAA+TGG | + | tig0015627:34002-34021 | None:intergenic | 20.0% |
!!! | ATTGATTTTTTGTAGATTGA+CGG | - | tig0015627:34440-34459 | Msa1356380:intron | 20.0% |
!! | TTGTTACTAAAAGAAAACTA+TGG | - | tig0015627:34644-34663 | Msa1356380:intron | 20.0% |
!! | ATTACATTTAACATACACAT+AGG | + | tig0015627:34884-34903 | None:intergenic | 20.0% |
!! | ACCAAATAGTAGAATAATTT+GGG | + | tig0015627:35277-35296 | None:intergenic | 20.0% |
!! | AACCAAATAGTAGAATAATT+TGG | + | tig0015627:35278-35297 | None:intergenic | 20.0% |
!!! | TAAAATGTTTTTGGTATATG+TGG | - | tig0015627:35556-35575 | Msa1356380:intron | 20.0% |
!! | AAAGACATATTTCATTAGTT+TGG | - | tig0015627:35602-35621 | Msa1356380:intron | 20.0% |
!!! | AATTGTTATTGACAAAATTC+TGG | + | tig0015627:36104-36123 | None:intergenic | 20.0% |
!! | ATTGAAGACAATTATAGAAA+TGG | - | tig0015627:36656-36675 | Msa1356380:intron | 20.0% |
!! | TTGAAGACAATTATAGAAAT+GGG | - | tig0015627:36657-36676 | Msa1356380:intron | 20.0% |
!!! | AACAATTTTGATAACCAAAA+GGG | + | tig0015627:36727-36746 | None:intergenic | 20.0% |
!! | TGAAACATAGTTAAATAGTA+AGG | - | tig0015627:37252-37271 | Msa1356380:intron | 20.0% |
!! | GAAACATAGTTAAATAGTAA+GGG | - | tig0015627:37253-37272 | Msa1356380:intron | 20.0% |
!! | TGAAACATAGTTAAATAGTA+AGG | - | tig0015627:37252-37271 | Msa1356380:intron | 20.0% |
!! | GAAACATAGTTAAATAGTAA+GGG | - | tig0015627:37253-37272 | Msa1356380:intron | 20.0% |
!!! | AATACATTTATTTTTTCCTG+AGG | - | tig0015627:38793-38812 | Msa1356380:intron | 20.0% |
!! | ATGTTTAATACACAAATTGA+CGG | + | tig0015627:39289-39308 | None:intergenic | 20.0% |
!!! | TGTGTATTAAACATTCATTT+TGG | - | tig0015627:39295-39314 | Msa1356380:intron | 20.0% |
!!! | TAAAATTACATTTTCTTTCG+AGG | + | tig0015627:39322-39341 | None:intergenic | 20.0% |
!!! | AAAAAATATAAGTCTGGAAT+CGG | - | tig0015627:39736-39755 | Msa1356380:CDS | 20.0% |
!!! | TGTTATGTTCTTTGAAAATA+TGG | - | tig0015627:39883-39902 | Msa1356380:CDS | 20.0% |
!!! | GTTATGTTCTTTGAAAATAT+GGG | - | tig0015627:39884-39903 | Msa1356380:CDS | 20.0% |
!!! | GGTTTTGATAAAGAAAATAT+TGG | - | tig0015627:39905-39924 | Msa1356380:CDS | 20.0% |
!!! | CTTTCTTTTTAAAAGTTACA+GGG | + | tig0015627:40773-40792 | None:intergenic | 20.0% |
!! | TACTACAACTGAAAATTAAA+AGG | + | tig0015627:40800-40819 | None:intergenic | 20.0% |
! | CTTTGTCTTTGTATAAGATA+TGG | - | tig0015627:32546-32565 | Msa1356380:CDS | 25.0% |
!! | TTCACAAAGTATTCTCAATT+TGG | - | tig0015627:32738-32757 | Msa1356380:CDS | 25.0% |
!! | TCACAAAGTATTCTCAATTT+GGG | - | tig0015627:32739-32758 | Msa1356380:CDS | 25.0% |
!! | TTCAACTTTTCTTCAACAAA+TGG | - | tig0015627:32887-32906 | Msa1356380:intron | 25.0% |
!! | TCAACTTTTCTTCAACAAAT+GGG | - | tig0015627:32888-32907 | Msa1356380:intron | 25.0% |
! | ATCTAGTGAAATTGATAAGT+GGG | + | tig0015627:33303-33322 | None:intergenic | 25.0% |
! | TGGATATTCTCCAAAATATT+GGG | - | tig0015627:33480-33499 | Msa1356380:intron | 25.0% |
! | TTCGGAAAGAAAGAAAAATT+TGG | + | tig0015627:33610-33629 | None:intergenic | 25.0% |
! | TAGATGACATAAGATTAGAA+AGG | - | tig0015627:33779-33798 | Msa1356380:intron | 25.0% |
!! | GTTTCTCTTATAGTTTTTCT+AGG | + | tig0015627:33980-33999 | None:intergenic | 25.0% |
! | AGATCTAAAGATTAATGAGT+TGG | - | tig0015627:34009-34028 | Msa1356380:intron | 25.0% |
!! | TAATGAGTTGGATTGAAATA+TGG | - | tig0015627:34021-34040 | Msa1356380:intron | 25.0% |
!! | TGGTTTTTGATAGAACATTA+TGG | - | tig0015627:34041-34060 | Msa1356380:intron | 25.0% |
! | CACATAAACGCAAAATTATA+TGG | + | tig0015627:34602-34621 | None:intergenic | 25.0% |
! | GTTTATGTGTATCTGTATTT+AGG | - | tig0015627:34613-34632 | Msa1356380:intron | 25.0% |
! | ACTGTAGAATATATTTCCTA+GGG | + | tig0015627:34706-34725 | None:intergenic | 25.0% |
! | TACTGTAGAATATATTTCCT+AGG | + | tig0015627:34707-34726 | None:intergenic | 25.0% |
!! | TTCAAGTTATCTTGTACATA+GGG | + | tig0015627:34740-34759 | None:intergenic | 25.0% |
!!! | TTTCAAGTTATCTTGTACAT+AGG | + | tig0015627:34741-34760 | None:intergenic | 25.0% |
! | ATACACATAGGTATATCTTA+TGG | + | tig0015627:34872-34891 | None:intergenic | 25.0% |
! | TGCAAATATAGGATAGTTAT+TGG | + | tig0015627:35077-35096 | None:intergenic | 25.0% |
!! | ATAGTAGAATAATTTGGGAT+AGG | + | tig0015627:35272-35291 | None:intergenic | 25.0% |
! | TCCCAAATTATTCTACTATT+TGG | - | tig0015627:35273-35292 | Msa1356380:intron | 25.0% |
! | TGATTCACAATAGAACATTA+TGG | + | tig0015627:35366-35385 | None:intergenic | 25.0% |
! | CATATGCATGTGAAATAAAT+TGG | + | tig0015627:35518-35537 | None:intergenic | 25.0% |
! | ATTTATTACAATTTGAGCAG+AGG | - | tig0015627:35919-35938 | Msa1356380:intron | 25.0% |
! | AATTTGACATGTGACTAATA+TGG | - | tig0015627:36120-36139 | Msa1356380:intron | 25.0% |
!!! | ACAATTTTGATAACCAAAAG+GGG | + | tig0015627:36726-36745 | None:intergenic | 25.0% |
!!! | CAACAATTTTGATAACCAAA+AGG | + | tig0015627:36728-36747 | None:intergenic | 25.0% |
!!! | CTTTTGGTTATCAAAATTGT+TGG | - | tig0015627:36726-36745 | Msa1356380:intron | 25.0% |
! | TTACCAACTAATAACTATAG+AGG | - | tig0015627:37107-37126 | Msa1356380:intron | 25.0% |
! | TTACCAACTAATAACTATAG+AGG | - | tig0015627:37107-37126 | Msa1356380:intron | 25.0% |
! | AAATAGACCAATATAGAGTA+AGG | - | tig0015627:37504-37523 | Msa1356380:CDS | 25.0% |
! | AATAGACCAATATAGAGTAA+GGG | - | tig0015627:37505-37524 | Msa1356380:CDS | 25.0% |
! | TTACCAACTAATAACTATAG+AGG | - | tig0015627:37107-37126 | Msa1356380:intron | 25.0% |
! | TTACCAACTAATAACTATAG+AGG | - | tig0015627:37107-37126 | Msa1356380:intron | 25.0% |
! | TTCAAGATATTAGATCTCAA+AGG | - | tig0015627:37903-37922 | Msa1356380:intron | 25.0% |
! | TTATTTCCCATACTCTTTAT+CGG | + | tig0015627:38049-38068 | None:intergenic | 25.0% |
! | TTACCAACTAATAACTATAG+AGG | - | tig0015627:37107-37126 | Msa1356380:intron | 25.0% |
! | TTCAAGATATTAGATCTCAA+AGG | - | tig0015627:37903-37922 | Msa1356380:intron | 25.0% |
! | TTATTTCCCATACTCTTTAT+CGG | + | tig0015627:38049-38068 | None:intergenic | 25.0% |
! | GAAATTACATAAATATCCTC+AGG | + | tig0015627:38812-38831 | None:intergenic | 25.0% |
!! | TTTTTGCCATTAATAGAGTT+AGG | + | tig0015627:38850-38869 | None:intergenic | 25.0% |
! | AAAATGCAAATAAGTGACAA+AGG | - | tig0015627:38866-38885 | Msa1356380:intron | 25.0% |
! | ATAGTAAAGAAAGAGACAAA+GGG | + | tig0015627:39392-39411 | None:intergenic | 25.0% |
! | GCTTGAAAAAAATATAAGTC+TGG | - | tig0015627:39730-39749 | Msa1356380:CDS | 25.0% |
! | ATGAATCATTCTATTACTAC+GGG | + | tig0015627:40290-40309 | None:intergenic | 25.0% |
! | CATGAATCATTCTATTACTA+CGG | + | tig0015627:40291-40310 | None:intergenic | 25.0% |
! | AAATCAAATGATCAGTTAGA+TGG | + | tig0015627:40332-40351 | None:intergenic | 25.0% |
!! | TTCACCAGAAATTCTAATTT+TGG | + | tig0015627:40479-40498 | None:intergenic | 25.0% |
! | AGAAGATAAAACCAAGATAT+CGG | - | tig0015627:40564-40583 | Msa1356380:CDS | 25.0% |
! | TGTAAATATCATTACCTTGT+AGG | - | tig0015627:40717-40736 | Msa1356380:intron | 25.0% |
!!! | GCTTTCTTTTTAAAAGTTAC+AGG | + | tig0015627:40774-40793 | None:intergenic | 25.0% |
TGAGAATACTTTGTGAAAGT+GGG | + | tig0015627:32735-32754 | None:intergenic | 30.0% | |
TTGAGAATACTTTGTGAAAG+TGG | + | tig0015627:32736-32755 | None:intergenic | 30.0% | |
! | TGAGTTTGATGCTATTGATT+CGG | + | tig0015627:32931-32950 | None:intergenic | 30.0% |
TAACTTTGTTAATGAGAGAC+GGG | + | tig0015627:33196-33215 | None:intergenic | 30.0% | |
GTAACTTTGTTAATGAGAGA+CGG | + | tig0015627:33197-33216 | None:intergenic | 30.0% | |
AAAAAGGAGTTGTTTGATAG+AGG | + | tig0015627:33219-33238 | None:intergenic | 30.0% | |
CATCTAGTGAAATTGATAAG+TGG | + | tig0015627:33304-33323 | None:intergenic | 30.0% | |
GAAATGATTCAATGAAGCAA+CGG | + | tig0015627:33415-33434 | None:intergenic | 30.0% | |
! | AGTGATAACAAAAGTATACG+AGG | + | tig0015627:33437-33456 | None:intergenic | 30.0% |
TAATCACATCTCATCTATAC+TGG | - | tig0015627:33460-33479 | Msa1356380:intron | 30.0% | |
CTGGATATTCTCCAAAATAT+TGG | - | tig0015627:33479-33498 | Msa1356380:intron | 30.0% | |
GAAAAGCCAATATTATGTTG+GGG | + | tig0015627:33523-33542 | None:intergenic | 30.0% | |
GGAAAAGCCAATATTATGTT+GGG | + | tig0015627:33524-33543 | None:intergenic | 30.0% | |
AGGAAAAGCCAATATTATGT+TGG | + | tig0015627:33525-33544 | None:intergenic | 30.0% | |
AAGTGCATTGTGATGTTTAT+AGG | - | tig0015627:33632-33651 | Msa1356380:intron | 30.0% | |
AAAATAGACTTAGGTGGTTT+GGG | - | tig0015627:33879-33898 | Msa1356380:intron | 30.0% | |
!! | CTTCTACTTTTGAATACTTC+TGG | + | tig0015627:34232-34251 | None:intergenic | 30.0% |
AGAGTTGTGTGACATAATTT+AGG | - | tig0015627:34289-34308 | Msa1356380:intron | 30.0% | |
AAGCATTCAAGAGAACTATA+AGG | - | tig0015627:34517-34536 | Msa1356380:intron | 30.0% | |
TACCTTCACGGAATATAAAA+AGG | + | tig0015627:34552-34571 | None:intergenic | 30.0% | |
!! | TCCAAAATAATTTGTTCCCT+AGG | - | tig0015627:34687-34706 | Msa1356380:intron | 30.0% |
! | TCCTAGGGAACAAATTATTT+TGG | + | tig0015627:34691-34710 | None:intergenic | 30.0% |
TTGTTTACAGTTGTAAAGCA+TGG | - | tig0015627:34798-34817 | Msa1356380:intron | 30.0% | |
AGAAAGTTGTAGCAAGTTAT+TGG | - | tig0015627:34962-34981 | Msa1356380:intron | 30.0% | |
! | TGTGTTATTAGGCTAGATTT+CGG | - | tig0015627:35015-35034 | Msa1356380:intron | 30.0% |
ATAGTTATTGGTACCATCTT+AGG | + | tig0015627:35065-35084 | None:intergenic | 30.0% | |
CTATCCTATATTTGCATGTT+AGG | - | tig0015627:35081-35100 | Msa1356380:intron | 30.0% | |
TCTATTGTGAATCATATCTG+TGG | - | tig0015627:35372-35391 | Msa1356380:intron | 30.0% | |
! | TTTCTCCGATTAGTGTTTTT+GGG | + | tig0015627:35419-35438 | None:intergenic | 30.0% |
! | TTTTCTCCGATTAGTGTTTT+TGG | + | tig0015627:35420-35439 | None:intergenic | 30.0% |
TGCACACTTCTTTATGATTA+TGG | - | tig0015627:35456-35475 | Msa1356380:intron | 30.0% | |
TTCTTTATGATTATGGCTGA+TGG | - | tig0015627:35463-35482 | Msa1356380:intron | 30.0% | |
ATTCTTAATAAGGCAGCAAA+AGG | + | tig0015627:35495-35514 | None:intergenic | 30.0% | |
!!! | AATGTTTTTGGTATATGTGG+TGG | - | tig0015627:35559-35578 | Msa1356380:intron | 30.0% |
AAAAGACAACCTCAACTATT+GGG | - | tig0015627:35707-35726 | Msa1356380:intron | 30.0% | |
AAATACCTGTAGAAAGTCTT+CGG | + | tig0015627:35846-35865 | None:intergenic | 30.0% | |
TGAAGTAGACCACTATAAAT+AGG | + | tig0015627:36047-36066 | None:intergenic | 30.0% | |
AATTACTTTCTGTGACAACT+CGG | + | tig0015627:36448-36467 | None:intergenic | 30.0% | |
AGTTGTCACAGAAAGTAATT+TGG | - | tig0015627:36448-36467 | Msa1356380:intron | 30.0% | |
GTTGTCACAGAAAGTAATTT+GGG | - | tig0015627:36449-36468 | Msa1356380:intron | 30.0% | |
!!! | TAACCTGTCTCATTGTTTTT+TGG | - | tig0015627:36545-36564 | Msa1356380:intron | 30.0% |
GACCTTCATGATAATAAACT+GGG | - | tig0015627:36567-36586 | Msa1356380:intron | 30.0% | |
ATAATTGTCTTCAATGACTC+TGG | + | tig0015627:36651-36670 | None:intergenic | 30.0% | |
!! | ACTTACAAGACAGTTTTGTA+AGG | - | tig0015627:36918-36937 | Msa1356380:intron | 30.0% |
ACTCTATATCGGTCTATTAT+TGG | + | tig0015627:37006-37025 | None:intergenic | 30.0% | |
TAATAGACCGATATAGAGTA+AGG | - | tig0015627:37007-37026 | Msa1356380:intron | 30.0% | |
AATAGACCGATATAGAGTAA+GGG | - | tig0015627:37008-37027 | Msa1356380:intron | 30.0% | |
AAATAGACCGATATAGAGTA+AGG | - | tig0015627:37045-37064 | Msa1356380:intron | 30.0% | |
AATAGACCGATATAGAGTAA+GGG | - | tig0015627:37008-37027 | Msa1356380:intron | 30.0% | |
CAACCTCTATAGTTATTAGT+TGG | + | tig0015627:37113-37132 | None:intergenic | 30.0% | |
ATCTTCTGTCTAAGGATAAA+CGG | + | tig0015627:37154-37173 | None:intergenic | 30.0% | |
ACTCTATATCGGTCTATTAT+TGG | + | tig0015627:37006-37025 | None:intergenic | 30.0% | |
TAATAGACCGATATAGAGTA+AGG | - | tig0015627:37007-37026 | Msa1356380:intron | 30.0% | |
AATAGACCGATATAGAGTAA+GGG | - | tig0015627:37008-37027 | Msa1356380:intron | 30.0% | |
AAATAGACCGATATAGAGTA+AGG | - | tig0015627:37045-37064 | Msa1356380:intron | 30.0% | |
AATAGACCGATATAGAGTAA+GGG | - | tig0015627:37008-37027 | Msa1356380:intron | 30.0% | |
CAACCTCTATAGTTATTAGT+TGG | + | tig0015627:37113-37132 | None:intergenic | 30.0% | |
ATCTTCTGTCTAAGGATAAA+CGG | + | tig0015627:37154-37173 | None:intergenic | 30.0% | |
ACTCTATATCGGTCTATTAT+TGG | + | tig0015627:37006-37025 | None:intergenic | 30.0% | |
TAATAGACCGATATAGAGTA+AGG | - | tig0015627:37007-37026 | Msa1356380:intron | 30.0% | |
AATAGACCGATATAGAGTAA+GGG | - | tig0015627:37008-37027 | Msa1356380:intron | 30.0% | |
CAACCTCTATAGTTATTAGT+TGG | + | tig0015627:37113-37132 | None:intergenic | 30.0% | |
ATCTTCTGTCTAAGGATAAA+CGG | + | tig0015627:37154-37173 | None:intergenic | 30.0% | |
ACTCTATATCGGTCTATTAT+TGG | + | tig0015627:37006-37025 | None:intergenic | 30.0% | |
TAATAGACCGATATAGAGTA+AGG | - | tig0015627:37007-37026 | Msa1356380:intron | 30.0% | |
AATAGACCGATATAGAGTAA+GGG | - | tig0015627:37008-37027 | Msa1356380:intron | 30.0% | |
AAATAGACCGATATAGAGTA+AGG | - | tig0015627:37045-37064 | Msa1356380:intron | 30.0% | |
AATAGACCGATATAGAGTAA+GGG | - | tig0015627:37008-37027 | Msa1356380:intron | 30.0% | |
CAACCTCTATAGTTATTAGT+TGG | + | tig0015627:37113-37132 | None:intergenic | 30.0% | |
ATCTTCTGTCTAAGGATAAA+CGG | + | tig0015627:37154-37173 | None:intergenic | 30.0% | |
GAAGTCTAATATCTCAAGAA+TGG | + | tig0015627:37859-37878 | None:intergenic | 30.0% | |
AGATATTAGACTTCAATTCC+TGG | - | tig0015627:37865-37884 | Msa1356380:intron | 30.0% | |
GATATTAGACTTCAATTCCT+GGG | - | tig0015627:37866-37885 | Msa1356380:intron | 30.0% | |
AATTCCTGGGAAATAATCAA+AGG | - | tig0015627:37879-37898 | Msa1356380:intron | 30.0% | |
ACTCTTTATCGGTCTATTAT+TGG | + | tig0015627:38038-38057 | None:intergenic | 30.0% | |
TAATAGACCGATAAAGAGTA+TGG | - | tig0015627:38039-38058 | Msa1356380:intron | 30.0% | |
! | AATAGACCGATAAAGAGTAT+GGG | - | tig0015627:38040-38059 | Msa1356380:intron | 30.0% |
AGAGTATGGGAAATAATCAA+AGG | - | tig0015627:38053-38072 | Msa1356380:intron | 30.0% | |
CAACCTCTATAGTTATTAGT+TGG | + | tig0015627:37113-37132 | None:intergenic | 30.0% | |
ATCTTCTGTCTAAGGATAAA+CGG | + | tig0015627:37154-37173 | None:intergenic | 30.0% | |
GAAGTCTAATATCTCAAGAA+TGG | + | tig0015627:37859-37878 | None:intergenic | 30.0% | |
!! | TTTCTGGAATCATGATATAC+TGG | - | tig0015627:38363-38382 | Msa1356380:intron | 30.0% |
ACTCTTTATCGGTCTATTAT+TGG | + | tig0015627:38038-38057 | None:intergenic | 30.0% | |
TAATAGACCGATAAAGAGTA+TGG | - | tig0015627:38039-38058 | Msa1356380:intron | 30.0% | |
! | AATAGACCGATAAAGAGTAT+GGG | - | tig0015627:38040-38059 | Msa1356380:intron | 30.0% |
AGAGTATGGGAAATAATCAA+AGG | - | tig0015627:38053-38072 | Msa1356380:intron | 30.0% | |
! | CTGTGATTTTACTAGTATTG+AGG | - | tig0015627:38457-38476 | Msa1356380:intron | 30.0% |
GTATATTACAGTATCAGACT+AGG | - | tig0015627:38562-38581 | Msa1356380:intron | 30.0% | |
TGTGATTTCTTGTGAAACAT+CGG | + | tig0015627:38597-38616 | None:intergenic | 30.0% | |
! | TAATAGAGTTAGGCATTGTT+TGG | + | tig0015627:38840-38859 | None:intergenic | 30.0% |
ACAATGCCTAACTCTATTAA+TGG | - | tig0015627:38841-38860 | Msa1356380:intron | 30.0% | |
ATGATATCATCAACATAACC+CGG | - | tig0015627:39036-39055 | Msa1356380:intron | 30.0% | |
TAGCCAAAACGTTACAATTT+AGG | - | tig0015627:39210-39229 | Msa1356380:intron | 30.0% | |
AGCCAAAACGTTACAATTTA+GGG | - | tig0015627:39211-39230 | Msa1356380:intron | 30.0% | |
! | TTCCCTAAATTGTAACGTTT+TGG | + | tig0015627:39216-39235 | None:intergenic | 30.0% |
TTAATACACAAATTGACGGA+GGG | + | tig0015627:39285-39304 | None:intergenic | 30.0% | |
TTTAATACACAAATTGACGG+AGG | + | tig0015627:39286-39305 | None:intergenic | 30.0% | |
TAGTAAAGAAAGAGACAAAG+GGG | + | tig0015627:39391-39410 | None:intergenic | 30.0% | |
CATAGTAAAGAAAGAGACAA+AGG | + | tig0015627:39393-39412 | None:intergenic | 30.0% | |
TGTCTCTTTCTTTACTATGA+TGG | - | tig0015627:39394-39413 | Msa1356380:intron | 30.0% | |
!!! | ATTTTGAAATTTCCAGTCAC+AGG | - | tig0015627:39473-39492 | Msa1356380:intron | 30.0% |
TTAGCTTATGCTTGTAGTAT+TGG | + | tig0015627:39534-39553 | None:intergenic | 30.0% | |
! | AAGCATTGTTTACATCATGA+AGG | + | tig0015627:39680-39699 | None:intergenic | 30.0% |
!!! | CTTTAGTGCTGCAATTTTTT+AGG | + | tig0015627:39704-39723 | None:intergenic | 30.0% |
TTGTTTACACAATAAGCTCT+TGG | - | tig0015627:39842-39861 | Msa1356380:CDS | 30.0% | |
! | TAAAGTTTTACTAATGCTGG+TGG | + | tig0015627:39963-39982 | None:intergenic | 30.0% |
! | CTGTAAAGTTTTACTAATGC+TGG | + | tig0015627:39966-39985 | None:intergenic | 30.0% |
!! | TTCTAAAGCTTACATTCCTT+TGG | - | tig0015627:40018-40037 | Msa1356380:CDS | 30.0% |
TTAACAAAACCTTACCTCAA+CGG | - | tig0015627:40077-40096 | Msa1356380:CDS | 30.0% | |
! | TTAACTCACCCAATCATTTT+TGG | - | tig0015627:40188-40207 | Msa1356380:CDS | 30.0% |
!! | TAACTCACCCAATCATTTTT+GGG | - | tig0015627:40189-40208 | Msa1356380:CDS | 30.0% |
ATAGTGTACTTTATGAAGCT+AGG | - | tig0015627:40374-40393 | Msa1356380:CDS | 30.0% | |
AGAGAAGGAAATTGCATTTA+TGG | - | tig0015627:40403-40422 | Msa1356380:CDS | 30.0% | |
GATGCCAAAATTAGAATTTC+TGG | - | tig0015627:40472-40491 | Msa1356380:CDS | 30.0% | |
GTGAATAGCTAAAATACCTA+GGG | + | tig0015627:40538-40557 | None:intergenic | 30.0% | |
AGTGAATAGCTAAAATACCT+AGG | + | tig0015627:40539-40558 | None:intergenic | 30.0% | |
GAAGATAAAACCAAGATATC+GGG | - | tig0015627:40565-40584 | Msa1356380:CDS | 30.0% | |
GAATATCGAATGTAGCTTAA+AGG | - | tig0015627:40601-40620 | Msa1356380:CDS | 30.0% | |
!! | AGAATTTGCTGCTGAATTTA+TGG | - | tig0015627:40646-40665 | Msa1356380:five_prime_UTR | 30.0% |
!! | GAATTTGCTGCTGAATTTAT+GGG | - | tig0015627:40647-40666 | Msa1356380:five_prime_UTR | 30.0% |
TGATAAGATGAATTCCTACA+AGG | + | tig0015627:40734-40753 | None:intergenic | 30.0% | |
GAAAGCAATATGTGAAACGA+GGG | + | tig0015627:32480-32499 | None:intergenic | 35.0% | |
GATATGGTTTCCTTTCTTTC+AGG | - | tig0015627:32562-32581 | Msa1356380:CDS | 35.0% | |
TCTAGAGAAACCTGAAAGAA+AGG | + | tig0015627:32575-32594 | None:intergenic | 35.0% | |
! | GGTTTCTCTAGAAATTCCAT+TGG | - | tig0015627:32583-32602 | Msa1356380:CDS | 35.0% |
AGAAAGCAATTGGTGTGAAT+TGG | + | tig0015627:32645-32664 | None:intergenic | 35.0% | |
GAGAATACTTTGTGAAAGTG+GGG | + | tig0015627:32734-32753 | None:intergenic | 35.0% | |
!! | ACATGTTGGTAGAAAGTGTT+AGG | - | tig0015627:32964-32983 | Msa1356380:intron | 35.0% |
!! | CATGTTGGTAGAAAGTGTTA+GGG | - | tig0015627:32965-32984 | Msa1356380:intron | 35.0% |
GATGCTAATGCTAATGATGT+TGG | - | tig0015627:33017-33036 | Msa1356380:intron | 35.0% | |
TCAACTTGAACTTCAACTAC+AGG | - | tig0015627:33045-33064 | Msa1356380:intron | 35.0% | |
CAACTTGAACTTCAACTACA+GGG | - | tig0015627:33046-33065 | Msa1356380:intron | 35.0% | |
TGAGGCGAATATTCTTGATA+AGG | + | tig0015627:33274-33293 | None:intergenic | 35.0% | |
!!! | CACTTTCTCCTTTTTCGAAA+AGG | - | tig0015627:33337-33356 | Msa1356380:CDS | 35.0% |
! | TGCTTGAACCTTTTCGAAAA+AGG | + | tig0015627:33348-33367 | None:intergenic | 35.0% |
! | TTTTCGAAAAGGTTCAAGCA+AGG | - | tig0015627:33348-33367 | Msa1356380:CDS | 35.0% |
TCAACATTCCAGAGCAAAAT+AGG | + | tig0015627:33548-33567 | None:intergenic | 35.0% | |
AAAGAAAAATTTGGCGTACC+TGG | + | tig0015627:33601-33620 | None:intergenic | 35.0% | |
ACATCACAATGCACTTTGTT+CGG | + | tig0015627:33628-33647 | None:intergenic | 35.0% | |
! | TTGCCTGAAAACTGCATTTT+TGG | - | tig0015627:33668-33687 | Msa1356380:intron | 35.0% |
ATAGAGTGAGAGAGAAAAGA+TGG | - | tig0015627:33814-33833 | Msa1356380:intron | 35.0% | |
!! | AAAAGATGGTGGAAAGATGT+TGG | - | tig0015627:33828-33847 | Msa1356380:intron | 35.0% |
!! | AAAGATGGTGGAAAGATGTT+GGG | - | tig0015627:33829-33848 | Msa1356380:intron | 35.0% |
TTTCCACCATCTTTCACTAT+AGG | + | tig0015627:33862-33881 | None:intergenic | 35.0% | |
!! | AGATGGTGGAAAATAGACTT+AGG | - | tig0015627:33870-33889 | Msa1356380:intron | 35.0% |
GAAAATAGACTTAGGTGGTT+TGG | - | tig0015627:33878-33897 | Msa1356380:intron | 35.0% | |
!! | GTTGTTGTTGTTGTTTCTGT+TGG | - | tig0015627:34111-34130 | Msa1356380:intron | 35.0% |
!!! | TTTTTTGTAGATTGACGGTG+TGG | - | tig0015627:34445-34464 | Msa1356380:intron | 35.0% |
!!! | CGGATATTTTAGCATCAACA+TGG | + | tig0015627:34483-34502 | None:intergenic | 35.0% |
TGTTGATGCTAAAATATCCG+TGG | - | tig0015627:34483-34502 | Msa1356380:intron | 35.0% | |
GTTGATGCTAAAATATCCGT+GGG | - | tig0015627:34484-34503 | Msa1356380:intron | 35.0% | |
CATTCAAGAGAACTATAAGG+AGG | - | tig0015627:34520-34539 | Msa1356380:intron | 35.0% | |
TCACGGAATATAAAAAGGCA+AGG | + | tig0015627:34547-34566 | None:intergenic | 35.0% | |
! | TGCCTTTTTATATTCCGTGA+AGG | - | tig0015627:34547-34566 | Msa1356380:intron | 35.0% |
ACACTACAATCATACCTTCA+CGG | + | tig0015627:34564-34583 | None:intergenic | 35.0% | |
CACATAGGTATATCTTATGG+TGG | + | tig0015627:34869-34888 | None:intergenic | 35.0% | |
AAGTTGTAGCAAGTTATTGG+TGG | - | tig0015627:34965-34984 | Msa1356380:intron | 35.0% | |
! | GTGTTATTAGGCTAGATTTC+GGG | - | tig0015627:35016-35035 | Msa1356380:intron | 35.0% |
TGTTATTAGGCTAGATTTCG+GGG | - | tig0015627:35017-35036 | Msa1356380:intron | 35.0% | |
ACCATCTTAGGATTTATGCA+AGG | + | tig0015627:35053-35072 | None:intergenic | 35.0% | |
TCCCATATTAAGTAGAGACA+TGG | - | tig0015627:35179-35198 | Msa1356380:intron | 35.0% | |
GCCATGTCTCTACTTAATAT+GGG | + | tig0015627:35183-35202 | None:intergenic | 35.0% | |
AGCCATGTCTCTACTTAATA+TGG | + | tig0015627:35184-35203 | None:intergenic | 35.0% | |
CTAGCTTATGAGGTTAAGTT+AGG | - | tig0015627:35246-35265 | Msa1356380:intron | 35.0% | |
CTAATCGGAGAAAATCAACA+CGG | - | tig0015627:35426-35445 | Msa1356380:intron | 35.0% | |
CAAAAGACAACCTCAACTAT+TGG | - | tig0015627:35706-35725 | Msa1356380:intron | 35.0% | |
TCAGAGGAAAAAGTTGTATC+AGG | - | tig0015627:35784-35803 | Msa1356380:intron | 35.0% | |
AATACCTGTAGAAAGTCTTC+GGG | + | tig0015627:35845-35864 | None:intergenic | 35.0% | |
AGTGAGTGACCTATTTATAG+TGG | - | tig0015627:36035-36054 | Msa1356380:intron | 35.0% | |
TGACAAAATTCTGGCATCAT+CGG | + | tig0015627:36095-36114 | None:intergenic | 35.0% | |
GTTGTGTGTAGAAAGCTATT+TGG | + | tig0015627:36165-36184 | None:intergenic | 35.0% | |
TCAAACACCTAAAGTTTGTC+TGG | - | tig0015627:36253-36272 | Msa1356380:intron | 35.0% | |
TCTGATCAGTAGTAGGAATA+TGG | - | tig0015627:36327-36346 | Msa1356380:intron | 35.0% | |
TATGGTGAACTATGAAGTTC+TGG | - | tig0015627:36345-36364 | Msa1356380:intron | 35.0% | |
ATTACTTTCTGTGACAACTC+GGG | + | tig0015627:36447-36466 | None:intergenic | 35.0% | |
AAAGTAATTTGGGTCTGGAA+GGG | - | tig0015627:36459-36478 | Msa1356380:intron | 35.0% | |
TAGTGGTGCAAATATTCTGT+GGG | + | tig0015627:36514-36533 | None:intergenic | 35.0% | |
ATAGTGGTGCAAATATTCTG+TGG | + | tig0015627:36515-36534 | None:intergenic | 35.0% | |
CAGAATATTTGCACCACTAT+TGG | - | tig0015627:36515-36534 | Msa1356380:intron | 35.0% | |
GGACCTTCATGATAATAAAC+TGG | - | tig0015627:36566-36585 | Msa1356380:intron | 35.0% | |
GACCCAGTTTATTATCATGA+AGG | + | tig0015627:36572-36591 | None:intergenic | 35.0% | |
!! | ATTTTGATAACCAAAAGGGG+TGG | + | tig0015627:36723-36742 | None:intergenic | 35.0% |
!!! | CTTCATTTTGTTGGCTTTGA+GGG | - | tig0015627:36826-36845 | Msa1356380:intron | 35.0% |
!!! | TTCATTTTGTTGGCTTTGAG+GGG | - | tig0015627:36827-36846 | Msa1356380:intron | 35.0% |
GATAAGAGCTTATAAAGACG+AGG | - | tig0015627:36886-36905 | Msa1356380:intron | 35.0% | |
CAAAACTGTCTTGTAAGTTG+AGG | + | tig0015627:36916-36935 | None:intergenic | 35.0% | |
!! | CAGTTTTGTAAGGATGAGTT+AGG | - | tig0015627:36928-36947 | Msa1356380:intron | 35.0% |
TTCAGACCCTTACTCTATAT+CGG | + | tig0015627:37017-37036 | None:intergenic | 35.0% | |
TTCAGACCCTTACTCTATAT+CGG | + | tig0015627:37017-37036 | None:intergenic | 35.0% | |
TATAGAGGTTGAGATCTCAA+TGG | - | tig0015627:37122-37141 | Msa1356380:intron | 35.0% | |
TATGTGTGATCTTCTGTCTA+AGG | + | tig0015627:37162-37181 | None:intergenic | 35.0% | |
TAGACAGAAGATCACACATA+TGG | - | tig0015627:37162-37181 | Msa1356380:intron | 35.0% | |
TATGTGTGATCTTCTGTCTA+AGG | + | tig0015627:37162-37181 | None:intergenic | 35.0% | |
TAGACAGAAGATCACACATA+TGG | - | tig0015627:37162-37181 | Msa1356380:intron | 35.0% | |
TTCAGACCCTTACTCTATAT+CGG | + | tig0015627:37017-37036 | None:intergenic | 35.0% | |
TTCAGACCCTTACTCTATAT+CGG | + | tig0015627:37017-37036 | None:intergenic | 35.0% | |
TATGTGTGATCTTCTGTCTA+AGG | + | tig0015627:37162-37181 | None:intergenic | 35.0% | |
TAGACAGAAGATCACACATA+TGG | - | tig0015627:37162-37181 | Msa1356380:intron | 35.0% | |
TTCAGACCCTTACTCTATAT+CGG | + | tig0015627:37017-37036 | None:intergenic | 35.0% | |
TTCAGTCCCTTACTCTATAT+TGG | + | tig0015627:37514-37533 | None:intergenic | 35.0% | |
TATAGAGGTTGAGATCTCAA+TGG | - | tig0015627:37122-37141 | Msa1356380:intron | 35.0% | |
TATGTGTGATCTTCTGTCTA+AGG | + | tig0015627:37162-37181 | None:intergenic | 35.0% | |
TAGACAGAAGATCACACATA+TGG | - | tig0015627:37162-37181 | Msa1356380:intron | 35.0% | |
TTCAGACCCTTACTCTATAT+CGG | + | tig0015627:37017-37036 | None:intergenic | 35.0% | |
TTCAGACCCTTACTCTATAT+CGG | + | tig0015627:37017-37036 | None:intergenic | 35.0% | |
TATAGAGGTTGAGATCTCAA+TGG | - | tig0015627:37122-37141 | Msa1356380:intron | 35.0% | |
TATGTGTGATCTTCTGTCTA+AGG | + | tig0015627:37162-37181 | None:intergenic | 35.0% | |
CTCAAAGGTTTATAAAGACG+AGG | - | tig0015627:37918-37937 | Msa1356380:intron | 35.0% | |
!! | TTTCTGGAATCGTGATATAC+TGG | - | tig0015627:38006-38025 | Msa1356380:intron | 35.0% |
TATAGAGGTTGAGATCTCAA+TGG | - | tig0015627:37122-37141 | Msa1356380:intron | 35.0% | |
TATGTGTGATCTTCTGTCTA+AGG | + | tig0015627:37162-37181 | None:intergenic | 35.0% | |
AGATATTAGACTTCAACTCC+TGG | - | tig0015627:38222-38241 | Msa1356380:intron | 35.0% | |
GATATTAGACTTCAACTCCT+GGG | - | tig0015627:38223-38242 | Msa1356380:intron | 35.0% | |
AACTCCTGGGAAATAATCAA+AGG | - | tig0015627:38236-38255 | Msa1356380:intron | 35.0% | |
CTCAAAGGTTTATAAAGACG+AGG | - | tig0015627:37918-37937 | Msa1356380:intron | 35.0% | |
CACAAGAAATCACATCTTTG+TGG | - | tig0015627:38603-38622 | Msa1356380:intron | 35.0% | |
!! | TTGTCTTGAAAGTGTTCTCT+TGG | - | tig0015627:38707-38726 | Msa1356380:CDS | 35.0% |
TGATATCATCAACATAACCC+GGG | - | tig0015627:39037-39056 | Msa1356380:intron | 35.0% | |
! | ATTTTCAAATTTCAGACCCC+GGG | + | tig0015627:39057-39076 | None:intergenic | 35.0% |
! | CATTTTCAAATTTCAGACCC+CGG | + | tig0015627:39058-39077 | None:intergenic | 35.0% |
GGGTGGGAAATAGATAATTT+CGG | + | tig0015627:39139-39158 | None:intergenic | 35.0% | |
GTAAACAAGATTGCAAGAGT+GGG | + | tig0015627:39172-39191 | None:intergenic | 35.0% | |
!! | GCTATTGTGTAATGGTTTTG+AGG | + | tig0015627:39194-39213 | None:intergenic | 35.0% |
!!! | ACGTTTTGGCTATTGTGTAA+TGG | + | tig0015627:39202-39221 | None:intergenic | 35.0% |
GACCAACAGAAGTAACATTT+GGG | + | tig0015627:39242-39261 | None:intergenic | 35.0% | |
TGACCAACAGAAGTAACATT+TGG | + | tig0015627:39243-39262 | None:intergenic | 35.0% | |
GAAAAGAAAAGAGTGAGAGA+AGG | + | tig0015627:39360-39379 | None:intergenic | 35.0% | |
!!! | TAAGTTTTTTGTCCTGTGAC+TGG | + | tig0015627:39488-39507 | None:intergenic | 35.0% |
! | GAAGGAAACTTAAGTACTGT+TGG | + | tig0015627:39662-39681 | None:intergenic | 35.0% |
ATTGAGTTCCTTAGGAGAAT+TGG | - | tig0015627:39992-40011 | Msa1356380:CDS | 35.0% | |
TAGAAACACCAATTCTCCTA+AGG | + | tig0015627:40003-40022 | None:intergenic | 35.0% | |
GGATACTTTCTGATAACCAA+AGG | + | tig0015627:40037-40056 | None:intergenic | 35.0% | |
ATAACAATACCGTTGAGGTA+AGG | + | tig0015627:40089-40108 | None:intergenic | 35.0% | |
GAATCATAACAATACCGTTG+AGG | + | tig0015627:40094-40113 | None:intergenic | 35.0% | |
CAAATGATCAGTTAGATGGT+TGG | + | tig0015627:40328-40347 | None:intergenic | 35.0% | |
! | TTGATATGTTGTTGTTCTGC+AGG | - | tig0015627:40351-40370 | Msa1356380:CDS | 35.0% |
! | GTACATTTTCTCCTCTACTT+GGG | - | tig0015627:40429-40448 | Msa1356380:CDS | 35.0% |
ATGTAGCTTAAAGGATATGC+TGG | - | tig0015627:40610-40629 | Msa1356380:CDS | 35.0% | |
AGCTTATCATGTGAAGACAA+GGG | + | tig0015627:40698-40717 | None:intergenic | 35.0% | |
ATGACAAAGCATGCTTGATT+TGG | - | tig0015627:40841-40860 | Msa1356380:five_prime_UTR | 35.0% | |
ATGTGTAGACGAACTCCAAA+TGG | + | tig0015627:32428-32447 | None:intergenic | 40.0% | |
CGAAAGCAATATGTGAAACG+AGG | + | tig0015627:32481-32500 | None:intergenic | 40.0% | |
AGAGATGAACAGAACAGAAC+AGG | + | tig0015627:32520-32539 | None:intergenic | 40.0% | |
GACAAGTGGAAGAAAGCAAT+TGG | + | tig0015627:32655-32674 | None:intergenic | 40.0% | |
TGCGTTTCCACATAAGATTC+AGG | - | tig0015627:32680-32699 | Msa1356380:CDS | 40.0% | |
CGAACATCCTGAATCTTATG+TGG | + | tig0015627:32690-32709 | None:intergenic | 40.0% | |
! | GATTCAGGATGTTCGTTTTG+TGG | - | tig0015627:32695-32714 | Msa1356380:CDS | 40.0% |
AGACGTTCATATTGTCGTTC+TGG | - | tig0015627:32810-32829 | Msa1356380:CDS | 40.0% | |
GACGTTCATATTGTCGTTCT+GGG | - | tig0015627:32811-32830 | Msa1356380:CDS | 40.0% | |
!! | ATATTGTCGTTCTGGGATGA+GGG | - | tig0015627:32818-32837 | Msa1356380:CDS | 40.0% |
TCTTCAACAAATGGGTGTGT+CGG | - | tig0015627:32896-32915 | Msa1356380:intron | 40.0% | |
!! | TGCTATTGATTCGGATTCCT+CGG | + | tig0015627:32922-32941 | None:intergenic | 40.0% |
ACCAGCATATCTCAACATGT+TGG | - | tig0015627:32950-32969 | Msa1356380:intron | 40.0% | |
ACCAACATGTTGAGATATGC+TGG | + | tig0015627:32954-32973 | None:intergenic | 40.0% | |
!! | GGTAGAAAGTGTTAGGGATT+TGG | - | tig0015627:32971-32990 | Msa1356380:intron | 40.0% |
ATTAGCATTAGCATCCAGCA+TGG | + | tig0015627:33012-33031 | None:intergenic | 40.0% | |
CTAGCTTACTTAGAGAGTCT+CGG | - | tig0015627:33113-33132 | Msa1356380:intron | 40.0% | |
TTTGTTAATGAGAGACGGGA+GGG | + | tig0015627:33192-33211 | None:intergenic | 40.0% | |
ATAGTGATGAGTAGTGTGAG+CGG | + | tig0015627:33246-33265 | None:intergenic | 40.0% | |
TTGATAAGTGGGTCATGATG+AGG | + | tig0015627:33292-33311 | None:intergenic | 40.0% | |
TCGCATCCCCAACATAATAT+TGG | - | tig0015627:33514-33533 | Msa1356380:intron | 40.0% | |
! | CTTTTCCTCCTATTTTGCTC+TGG | - | tig0015627:33537-33556 | Msa1356380:intron | 40.0% |
ACATTCCAGAGCAAAATAGG+AGG | + | tig0015627:33545-33564 | None:intergenic | 40.0% | |
ACTCCTTCAAACTAGAGTTC+TGG | - | tig0015627:33568-33587 | Msa1356380:intron | 40.0% | |
! | GCACCAAAAATGCAGTTTTC+AGG | + | tig0015627:33674-33693 | None:intergenic | 40.0% |
! | CGAAGATGATGATGTTGTGT+CGG | - | tig0015627:33742-33761 | Msa1356380:intron | 40.0% |
!! | AAGATGGTGGAAAGATGTTG+GGG | - | tig0015627:33830-33849 | Msa1356380:intron | 40.0% |
GTAGCACCTATAGTGAAAGA+TGG | - | tig0015627:33853-33872 | Msa1356380:intron | 40.0% | |
TGGTGGAAAATAGACTTAGG+TGG | - | tig0015627:33873-33892 | Msa1356380:intron | 40.0% | |
CTCGTTACTACATAATCTCC+AGG | + | tig0015627:33920-33939 | None:intergenic | 40.0% | |
GATCAGAGTTAGATCACTAG+AGG | - | tig0015627:33944-33963 | Msa1356380:intron | 40.0% | |
! | AAGTCTTATCCCACTAAGTG+GGG | + | tig0015627:34090-34109 | None:intergenic | 40.0% |
! | CAAGTCTTATCCCACTAAGT+GGG | + | tig0015627:34091-34110 | None:intergenic | 40.0% |
ATATGATAGCCGCTGAGAAT+GGG | + | tig0015627:34342-34361 | None:intergenic | 40.0% | |
ATGCTTGTAGATAGAACCCA+CGG | + | tig0015627:34503-34522 | None:intergenic | 40.0% | |
AGTTGTAAAGCATGGTCGTA+TGG | - | tig0015627:34806-34825 | Msa1356380:intron | 40.0% | |
TCGTATGGCTGAAGTCAAAT+TGG | - | tig0015627:34821-34840 | Msa1356380:intron | 40.0% | |
GCCTTGCATAAATCCTAAGA+TGG | - | tig0015627:35049-35068 | Msa1356380:intron | 40.0% | |
GAGGCCTAACATGCAAATAT+AGG | + | tig0015627:35088-35107 | None:intergenic | 40.0% | |
!! | ATGTCCAATTTTGGCGTAAG+AGG | - | tig0015627:35144-35163 | Msa1356380:intron | 40.0% |
!! | TGTCCAATTTTGGCGTAAGA+GGG | - | tig0015627:35145-35164 | Msa1356380:intron | 40.0% |
TAACCTCATAAGCTAGCTCA+AGG | + | tig0015627:35242-35261 | None:intergenic | 40.0% | |
GAAGGCCCAAAAACACTAAT+CGG | - | tig0015627:35411-35430 | Msa1356380:intron | 40.0% | |
TATGATTATGGCTGATGGCT+TGG | - | tig0015627:35468-35487 | Msa1356380:intron | 40.0% | |
TTTGGTATATGTGGTGGTAG+TGG | - | tig0015627:35565-35584 | Msa1356380:intron | 40.0% | |
TTGGTATATGTGGTGGTAGT+GGG | - | tig0015627:35566-35585 | Msa1356380:intron | 40.0% | |
CATTCTAGGTTCCAAAGACA+TGG | - | tig0015627:35669-35688 | Msa1356380:intron | 40.0% | |
!! | GAGGTTGTCTTTTGATTGCA+CGG | + | tig0015627:35700-35719 | None:intergenic | 40.0% |
GTTGAACAACCCAATAGTTG+AGG | + | tig0015627:35719-35738 | None:intergenic | 40.0% | |
AACTAGCAAGCTGAAGTTGA+TGG | - | tig0015627:35736-35755 | Msa1356380:intron | 40.0% | |
TTTCCTCTGAACTCCTAGTT+CGG | + | tig0015627:35774-35793 | None:intergenic | 40.0% | |
GGCTTCTGTAATAATAGCTG+AGG | + | tig0015627:35824-35843 | None:intergenic | 40.0% | |
! | AAATTCTGGCATCATCGGTT+AGG | + | tig0015627:36090-36109 | None:intergenic | 40.0% |
TGACTAATATGGCGTCTGAA+AGG | - | tig0015627:36131-36150 | Msa1356380:intron | 40.0% | |
GTTAGGGTGTAGTCTCATAT+TGG | + | tig0015627:36190-36209 | None:intergenic | 40.0% | |
TGCTCTTCCAGACAAACTTT+AGG | + | tig0015627:36263-36282 | None:intergenic | 40.0% | |
TCAGCATTCTGATCAGTAGT+AGG | - | tig0015627:36320-36339 | Msa1356380:intron | 40.0% | |
TGACATCTTTGTGCTAGAGA+AGG | + | tig0015627:36378-36397 | None:intergenic | 40.0% | |
ACAAAGATGTCAAGTTCCAG+AGG | - | tig0015627:36386-36405 | Msa1356380:intron | 40.0% | |
CACAGAAAGTAATTTGGGTC+TGG | - | tig0015627:36454-36473 | Msa1356380:intron | 40.0% | |
GAAAGTAATTTGGGTCTGGA+AGG | - | tig0015627:36458-36477 | Msa1356380:intron | 40.0% | |
TATTTGCACCACTATTGGCA+AGG | - | tig0015627:36520-36539 | Msa1356380:intron | 40.0% | |
AGGTTAAACCTTGCCAATAG+TGG | + | tig0015627:36531-36550 | None:intergenic | 40.0% | |
GGTCCAAAAAACAATGAGAC+AGG | + | tig0015627:36551-36570 | None:intergenic | 40.0% | |
TCTGAGTCGAGCATTTATCT+TGG | + | tig0015627:36594-36613 | None:intergenic | 40.0% | |
GCAACTTAAATGCCGCAATT+AGG | + | tig0015627:36785-36804 | None:intergenic | 40.0% | |
! | CTCCAACACCTTCATTTTGT+TGG | - | tig0015627:36817-36836 | Msa1356380:intron | 40.0% |
! | AGCCAACAAAATGAAGGTGT+TGG | + | tig0015627:36822-36841 | None:intergenic | 40.0% |
CCTCAAAGCCAACAAAATGA+AGG | + | tig0015627:36828-36847 | None:intergenic | 40.0% | |
!!! | CCTTCATTTTGTTGGCTTTG+AGG | - | tig0015627:36825-36844 | Msa1356380:intron | 40.0% |
!!! | TCATTTTGTTGGCTTTGAGG+GGG | - | tig0015627:36828-36847 | Msa1356380:intron | 40.0% |
! | GAGTCTTATCTATCCGATGT+GGG | + | tig0015627:36864-36883 | None:intergenic | 40.0% |
! | AGAGTCTTATCTATCCGATG+TGG | + | tig0015627:36865-36884 | None:intergenic | 40.0% |
!! | TTTCTGGAATCGTGACATTC+TGG | - | tig0015627:36974-36993 | Msa1356380:intron | 40.0% |
GAAGCCTTTGATTATTTCCC+AGG | + | tig0015627:37886-37905 | None:intergenic | 40.0% | |
CTAACTCATCCTTACGAAAC+CGG | + | tig0015627:37962-37981 | None:intergenic | 40.0% | |
GAAGCCTTTGATTATTTCCC+AGG | + | tig0015627:37886-37905 | None:intergenic | 40.0% | |
CTAACTCATCCTTACGAAAC+CGG | + | tig0015627:37962-37981 | None:intergenic | 40.0% | |
GATATCATCAACATAACCCG+GGG | - | tig0015627:39038-39057 | Msa1356380:intron | 40.0% | |
! | CGGGGTCTGAAATTTGAAAA+TGG | - | tig0015627:39056-39075 | Msa1356380:intron | 40.0% |
GATTATCTGTGCATCATGAC+TGG | + | tig0015627:39117-39136 | None:intergenic | 40.0% | |
GGTAAACAAGATTGCAAGAG+TGG | + | tig0015627:39173-39192 | None:intergenic | 40.0% | |
! | TGCCCAAATGTTACTTCTGT+TGG | - | tig0015627:39237-39256 | Msa1356380:intron | 40.0% |
! | TTGACGGAGGGTTAATGTTT+TGG | + | tig0015627:39273-39292 | None:intergenic | 40.0% |
AAAAGAGTGAGAGAAGGTGA+AGG | + | tig0015627:39354-39373 | None:intergenic | 40.0% | |
TAGAGCTATTGCTTCACTGT+TGG | + | tig0015627:39447-39466 | None:intergenic | 40.0% | |
GTTAGAACCATTCCTGCTTT+AGG | - | tig0015627:39560-39579 | Msa1356380:intron | 40.0% | |
TGCAAAACCTAAAGCAGGAA+TGG | + | tig0015627:39570-39589 | None:intergenic | 40.0% | |
GATCATGCAAAACCTAAAGC+AGG | + | tig0015627:39575-39594 | None:intergenic | 40.0% | |
TCTTGGTCATTGTTGTCTAC+AGG | - | tig0015627:39859-39878 | Msa1356380:CDS | 40.0% | |
TGCTGGTGGCAAAAATTTCA+GGG | + | tig0015627:39949-39968 | None:intergenic | 40.0% | |
ATGCTGGTGGCAAAAATTTC+AGG | + | tig0015627:39950-39969 | None:intergenic | 40.0% | |
AGAGCAAGATTGAGTTCCTT+AGG | - | tig0015627:39984-40003 | Msa1356380:CDS | 40.0% | |
ATGTCAGACACAAGTAGTTC+TGG | + | tig0015627:40058-40077 | None:intergenic | 40.0% | |
CTCACTGCCCAAAAATGATT+GGG | + | tig0015627:40199-40218 | None:intergenic | 40.0% | |
ACTCACTGCCCAAAAATGAT+TGG | + | tig0015627:40200-40219 | None:intergenic | 40.0% | |
! | CGTACATTTTCTCCTCTACT+TGG | - | tig0015627:40428-40447 | Msa1356380:CDS | 40.0% |
TTTATGCTGTACCCAAGTAG+AGG | + | tig0015627:40443-40462 | None:intergenic | 40.0% | |
TCTACTTGGGTACAGCATAA+AGG | - | tig0015627:40442-40461 | Msa1356380:CDS | 40.0% | |
TTCTGGTGAACTCAATGAAG+AGG | - | tig0015627:40489-40508 | Msa1356380:CDS | 40.0% | |
TTATCATGTGAAGACAAGGG+AGG | + | tig0015627:40695-40714 | None:intergenic | 40.0% | |
CAGCTTATCATGTGAAGACA+AGG | + | tig0015627:40699-40718 | None:intergenic | 40.0% | |
CTTAGAGCAACATGTGAGAG+AGG | + | tig0015627:32392-32411 | None:intergenic | 45.0% | |
AGACGAACTCCAAATGGATG+AGG | + | tig0015627:32422-32441 | None:intergenic | 45.0% | |
!! | CATATTGTCGTTCTGGGATG+AGG | - | tig0015627:32817-32836 | Msa1356380:CDS | 45.0% |
GGACACAGTAGTCTCTGATT+GGG | - | tig0015627:32839-32858 | Msa1356380:CDS | 45.0% | |
TCACTTCTCTTCTTCCATGC+TGG | - | tig0015627:32995-33014 | Msa1356380:intron | 45.0% | |
CTTCACATTGCAGCTCTCAA+AGG | - | tig0015627:33077-33096 | Msa1356380:intron | 45.0% | |
ATACCTGGCGACATTCATTG+AGG | + | tig0015627:33153-33172 | None:intergenic | 45.0% | |
CTTTGTTAATGAGAGACGGG+AGG | + | tig0015627:33193-33212 | None:intergenic | 45.0% | |
TAGTGATGAGTAGTGTGAGC+GGG | + | tig0015627:33245-33264 | None:intergenic | 45.0% | |
! | AGGCCAGAACTCTAGTTTGA+AGG | + | tig0015627:33574-33593 | None:intergenic | 45.0% |
AATTTGGCGTACCTGGTTCA+AGG | + | tig0015627:33594-33613 | None:intergenic | 45.0% | |
ATGATGTTGTGTCGGATGTG+TGG | - | tig0015627:33750-33769 | Msa1356380:intron | 45.0% | |
GAGTGAGAGAGAAAAGATGG+TGG | - | tig0015627:33817-33836 | Msa1356380:intron | 45.0% | |
!! | AGATGGTGGAAAGATGTTGG+GGG | - | tig0015627:33831-33850 | Msa1356380:intron | 45.0% |
GCACCTATAGTGAAAGATGG+TGG | - | tig0015627:33856-33875 | Msa1356380:intron | 45.0% | |
AGTTAGATCACTAGAGGCAG+AGG | - | tig0015627:33950-33969 | Msa1356380:intron | 45.0% | |
! | CCAAGTCTTATCCCACTAAG+TGG | + | tig0015627:34092-34111 | None:intergenic | 45.0% |
CCACTTAGTGGGATAAGACT+TGG | - | tig0015627:34089-34108 | Msa1356380:intron | 45.0% | |
TCTGATTTCCCCATTCTCAG+CGG | - | tig0015627:34330-34349 | Msa1356380:intron | 45.0% | |
TATGATAGCCGCTGAGAATG+GGG | + | tig0015627:34341-34360 | None:intergenic | 45.0% | |
GATATGATAGCCGCTGAGAA+TGG | + | tig0015627:34343-34362 | None:intergenic | 45.0% | |
TGTAGTGTCATGAGTGCTTG+TGG | - | tig0015627:34576-34595 | Msa1356380:intron | 45.0% | |
GTCAAATTGGTGTACATGCC+AGG | - | tig0015627:34834-34853 | Msa1356380:intron | 45.0% | |
! | TTATGGTGGTAGTGATTGCC+TGG | + | tig0015627:34855-34874 | None:intergenic | 45.0% |
TTGCAGGACAGGACATCTAT+GGG | + | tig0015627:35110-35129 | None:intergenic | 45.0% | |
TTTGCAGGACAGGACATCTA+TGG | + | tig0015627:35111-35130 | None:intergenic | 45.0% | |
! | ATCTAGAGCGCAAAGTTTGC+AGG | + | tig0015627:35126-35145 | None:intergenic | 45.0% |
!! | GCGCTCTAGATGTCCAATTT+TGG | - | tig0015627:35135-35154 | Msa1356380:intron | 45.0% |
!! | GTCCAATTTTGGCGTAAGAG+GGG | - | tig0015627:35146-35165 | Msa1356380:intron | 45.0% |
ATAAGCTAGCTCAAGGAGTG+AGG | + | tig0015627:35235-35254 | None:intergenic | 45.0% | |
! | ACTCCTTGAGCTAGCTTATG+AGG | - | tig0015627:35236-35255 | Msa1356380:intron | 45.0% |
!! | TCACCTAGTTGGTAAGGCTT+GGG | + | tig0015627:35318-35337 | None:intergenic | 45.0% |
!! | TTCACCTAGTTGGTAAGGCT+TGG | + | tig0015627:35319-35338 | None:intergenic | 45.0% |
CCTTACCAACTAGGTGAAAC+CGG | - | tig0015627:35321-35340 | Msa1356380:intron | 45.0% | |
AACCGGCTACTTGGATCAAA+CGG | - | tig0015627:35338-35357 | Msa1356380:intron | 45.0% | |
! | TTTTGGGCCTTCTGAGTCAA+TGG | + | tig0015627:35403-35422 | None:intergenic | 45.0% |
!! | ATATGTGGTGGTAGTGGGTA+AGG | - | tig0015627:35571-35590 | Msa1356380:intron | 45.0% |
GTAGATCAGTTTGCCGAACT+AGG | - | tig0015627:35758-35777 | Msa1356380:intron | 45.0% | |
TTGAGCAGAGGAGAAAATGC+AGG | - | tig0015627:35931-35950 | Msa1356380:intron | 45.0% | |
AGTTTGAGGGGACATCGTTA+GGG | + | tig0015627:36206-36225 | None:intergenic | 45.0% | |
TCAACCACCTTGAGTTTGAG+GGG | + | tig0015627:36218-36237 | None:intergenic | 45.0% | |
CTCAACCACCTTGAGTTTGA+GGG | + | tig0015627:36219-36238 | None:intergenic | 45.0% | |
TGTCTTCAATGACTCTGGCA+GGG | + | tig0015627:36646-36665 | None:intergenic | 45.0% | |
TTGTCTTCAATGACTCTGGC+AGG | + | tig0015627:36647-36666 | None:intergenic | 45.0% | |
ATGCCGCAATTAGGTGACTA+GGG | + | tig0015627:36776-36795 | None:intergenic | 45.0% | |
AATGCCGCAATTAGGTGACT+AGG | + | tig0015627:36777-36796 | None:intergenic | 45.0% | |
CCAGTTTGACAGTGGGAATT+GGG | + | tig0015627:36954-36973 | None:intergenic | 45.0% | |
ACCAGTTTGACAGTGGGAAT+TGG | + | tig0015627:36955-36974 | None:intergenic | 45.0% | |
CCAGAAACCAGTTTGACAGT+GGG | + | tig0015627:36961-36980 | None:intergenic | 45.0% | |
TCCAGAAACCAGTTTGACAG+TGG | + | tig0015627:36962-36981 | None:intergenic | 45.0% | |
CGGTTTCGTAAGGATGAGTT+AGG | - | tig0015627:37960-37979 | Msa1356380:intron | 45.0% | |
CCAGTTTGACAGTGGGAATT+GGG | + | tig0015627:36954-36973 | None:intergenic | 45.0% | |
ACCAGTTTGACAGTGGGAAT+TGG | + | tig0015627:36955-36974 | None:intergenic | 45.0% | |
CCAGAAACCAGTTTGACAGT+GGG | + | tig0015627:36961-36980 | None:intergenic | 45.0% | |
TCCAGAAACCAGTTTGACAG+TGG | + | tig0015627:36962-36981 | None:intergenic | 45.0% | |
CGGTTTCGTAAGGATGAGTT+AGG | - | tig0015627:37960-37979 | Msa1356380:intron | 45.0% | |
CCAGTTTGACAGTGGGAATT+GGG | + | tig0015627:36954-36973 | None:intergenic | 45.0% | |
ACCAGTTTGACAGTGGGAAT+TGG | + | tig0015627:36955-36974 | None:intergenic | 45.0% | |
CCAGAAACCAGTTTGACAGT+GGG | + | tig0015627:36961-36980 | None:intergenic | 45.0% | |
TCCAGAAACCAGTTTGACAG+TGG | + | tig0015627:36962-36981 | None:intergenic | 45.0% | |
CAAGAGTGGGATTATGCTGA+GGG | + | tig0015627:39159-39178 | None:intergenic | 45.0% | |
GAAAGAGACAAAGGGGAAGA+AGG | + | tig0015627:39384-39403 | None:intergenic | 45.0% | |
!! | TTGCTTCACTGTTGGTTTGC+AGG | + | tig0015627:39439-39458 | None:intergenic | 45.0% |
GAAGCTAGGACTTTCAGAGA+AGG | - | tig0015627:40388-40407 | Msa1356380:CDS | 45.0% | |
ACTTGGGTACAGCATAAAGG+AGG | - | tig0015627:40445-40464 | Msa1356380:CDS | 45.0% | |
CCTTTCAGAACCCGATATCT+TGG | + | tig0015627:40578-40597 | None:intergenic | 45.0% | |
!! | CCAAGATATCGGGTTCTGAA+AGG | - | tig0015627:40575-40594 | Msa1356380:CDS | 45.0% |
!! | GATATCGGGTTCTGAAAGGA+AGG | - | tig0015627:40579-40598 | Msa1356380:CDS | 45.0% |
GCTGCTGAATTTATGGGTGT+TGG | - | tig0015627:40653-40672 | Msa1356380:five_prime_UTR | 45.0% | |
!! | GTAAATATTAAAATATTAAT+TGG | - | tig0015627:34919-34938 | Msa1356380:intron | 5.0% |
!! | TTATATTATTAAGATTATTA+TGG | - | tig0015627:38733-38752 | Msa1356380:CDS | 5.0% |
AGAGCAACATGTGAGAGAGG+CGG | + | tig0015627:32389-32408 | None:intergenic | 50.0% | |
AGTTACCCGCCTCATCCATT+TGG | - | tig0015627:32410-32429 | Msa1356380:three_prime_UTR | 50.0% | |
GAACTCCAAATGGATGAGGC+GGG | + | tig0015627:32418-32437 | None:intergenic | 50.0% | |
CGAACTCCAAATGGATGAGG+CGG | + | tig0015627:32419-32438 | None:intergenic | 50.0% | |
GTGAAACGAGGGAAGAACGA+TGG | + | tig0015627:32469-32488 | None:intergenic | 50.0% | |
GGAAACGCAGCATAGACAAG+TGG | + | tig0015627:32669-32688 | None:intergenic | 50.0% | |
GGGACACAGTAGTCTCTGAT+TGG | - | tig0015627:32838-32857 | Msa1356380:CDS | 50.0% | |
AGTCTCTGATTGGGAACTGC+AGG | - | tig0015627:32848-32867 | Msa1356380:CDS | 50.0% | |
TCTGATTGGGAACTGCAGGA+AGG | - | tig0015627:32852-32871 | Msa1356380:CDS | 50.0% | |
GCAGCTCTCAAAGGTGACAA+CGG | - | tig0015627:33086-33105 | Msa1356380:intron | 50.0% | |
CTTCCTCAATGAATGTCGCC+AGG | - | tig0015627:33147-33166 | Msa1356380:intron | 50.0% | |
GTCAGCGGAGGATATATACC+TGG | + | tig0015627:33168-33187 | None:intergenic | 50.0% | |
TAGTGTGAGCGGGAGGAAAA+AGG | + | tig0015627:33235-33254 | None:intergenic | 50.0% | |
GAAAAGGTTCAAGCAAGGCG+TGG | - | tig0015627:33353-33372 | Msa1356380:CDS | 50.0% | |
AAGCAGCATCTTGAGAAGCG+AGG | + | tig0015627:33391-33410 | None:intergenic | 50.0% | |
! | CTGCGGGGATCCCAATATTT+TGG | + | tig0015627:33493-33512 | None:intergenic | 50.0% |
TATGTTGGGGATGCGATCTG+CGG | + | tig0015627:33510-33529 | None:intergenic | 50.0% | |
!! | TAGAGTTCTGGCCTTGAACC+AGG | - | tig0015627:33580-33599 | Msa1356380:intron | 50.0% |
! | TAGGTGGTTTGGGCATGTAG+AGG | - | tig0015627:33889-33908 | Msa1356380:intron | 50.0% |
CTTATCCCACTAAGTGGGGT+CGG | + | tig0015627:34086-34105 | None:intergenic | 50.0% | |
CACCCCTCTTACGCCAAAAT+TGG | + | tig0015627:35151-35170 | None:intergenic | 50.0% | |
!! | ACCTAGTTGGTAAGGCTTGG+GGG | + | tig0015627:35316-35335 | None:intergenic | 50.0% |
!! | CACCTAGTTGGTAAGGCTTG+GGG | + | tig0015627:35317-35336 | None:intergenic | 50.0% |
! | CCGGTTTCACCTAGTTGGTA+AGG | + | tig0015627:35324-35343 | None:intergenic | 50.0% |
! | AGTAGCCGGTTTCACCTAGT+TGG | + | tig0015627:35329-35348 | None:intergenic | 50.0% |
ACTAGGTGAAACCGGCTACT+TGG | - | tig0015627:35329-35348 | Msa1356380:intron | 50.0% | |
!! | GGCCAAACCATTGACTCAGA+AGG | - | tig0015627:35393-35412 | Msa1356380:intron | 50.0% |
GGCCTTCTGAGTCAATGGTT+TGG | + | tig0015627:35398-35417 | None:intergenic | 50.0% | |
TTGCCGAACTAGGAGTTCAG+AGG | - | tig0015627:35768-35787 | Msa1356380:intron | 50.0% | |
GAAGCCCGAAGACTTTCTAC+AGG | - | tig0015627:35838-35857 | Msa1356380:intron | 50.0% | |
GAGTTTGAGGGGACATCGTT+AGG | + | tig0015627:36207-36226 | None:intergenic | 50.0% | |
ACGATGTCCCCTCAAACTCA+AGG | - | tig0015627:36208-36227 | Msa1356380:intron | 50.0% | |
ATGTCCCCTCAAACTCAAGG+TGG | - | tig0015627:36211-36230 | Msa1356380:intron | 50.0% | |
GCTCAACCACCTTGAGTTTG+AGG | + | tig0015627:36220-36239 | None:intergenic | 50.0% | |
ATGAACCACCGTTTGCAGAG+AGG | - | tig0015627:36284-36303 | Msa1356380:intron | 50.0% | |
CCACAAAGCCTCTCTGCAAA+CGG | + | tig0015627:36295-36314 | None:intergenic | 50.0% | |
! | CGTTTGCAGAGAGGCTTTGT+GGG | - | tig0015627:36293-36312 | Msa1356380:intron | 50.0% |
! | GTTTGCAGAGAGGCTTTGTG+GGG | - | tig0015627:36294-36313 | Msa1356380:intron | 50.0% |
! | AAGTTCCAGAGGAAGAGCAC+TGG | - | tig0015627:36397-36416 | Msa1356380:intron | 50.0% |
!! | GAGCACTGGACTGTGTGATA+AGG | - | tig0015627:36411-36430 | Msa1356380:intron | 50.0% |
AAGTGCAGTCAGTCCCATCT+GGG | - | tig0015627:36613-36632 | Msa1356380:intron | 50.0% | |
GTCTTCAATGACTCTGGCAG+GGG | + | tig0015627:36645-36664 | None:intergenic | 50.0% | |
!! | ATAGAAATGGGCTGTCGAGC+AGG | - | tig0015627:36669-36688 | Msa1356380:intron | 50.0% |
!! | TAGAAATGGGCTGTCGAGCA+GGG | - | tig0015627:36670-36689 | Msa1356380:intron | 50.0% |
ACTAGGGGTGGACGCAATAA+AGG | + | tig0015627:36760-36779 | None:intergenic | 50.0% | |
CACCCCTAGTCACCTAATTG+CGG | - | tig0015627:36770-36789 | Msa1356380:intron | 50.0% | |
TGCCGCAATTAGGTGACTAG+GGG | + | tig0015627:36775-36794 | None:intergenic | 50.0% | |
! | GGTGTTGGAGACTGCAATGA+AGG | + | tig0015627:36807-36826 | None:intergenic | 50.0% |
!!! | TTTTGTTGGCTTTGAGGGGG+TGG | - | tig0015627:36831-36850 | Msa1356380:intron | 50.0% |
! | GGGTGGATTTAGTCCCACAT+CGG | - | tig0015627:36848-36867 | Msa1356380:intron | 50.0% |
CCCAATTCCCACTGTCAAAC+TGG | - | tig0015627:36951-36970 | Msa1356380:intron | 50.0% | |
! | CCCACTGTCAAACTGGTTTC+TGG | - | tig0015627:36958-36977 | Msa1356380:intron | 50.0% |
!! | CCTTACGAAACCGGCTTGTA+AGG | + | tig0015627:37953-37972 | None:intergenic | 50.0% |
! | CCTTACAAGCCGGTTTCGTA+AGG | - | tig0015627:37950-37969 | Msa1356380:intron | 50.0% |
CCCAATTCCCACTGTCAAAC+TGG | - | tig0015627:36951-36970 | Msa1356380:intron | 50.0% | |
! | CCCACTGTCAAACTGGTTTC+TGG | - | tig0015627:36958-36977 | Msa1356380:intron | 50.0% |
!! | CCTTACGAAACCGGCTTGTA+AGG | + | tig0015627:37953-37972 | None:intergenic | 50.0% |
! | CCTTACAAGCCGGTTTCGTA+AGG | - | tig0015627:37950-37969 | Msa1356380:intron | 50.0% |
CCCAATTCCCACTGTCAAAC+TGG | - | tig0015627:36951-36970 | Msa1356380:intron | 50.0% | |
! | CCCACTGTCAAACTGGTTTC+TGG | - | tig0015627:36958-36977 | Msa1356380:intron | 50.0% |
GAGATGAGCTGCTGAATGAG+AGG | - | tig0015627:39007-39026 | Msa1356380:intron | 50.0% | |
AGTGGGATTATGCTGAGGGT+GGG | + | tig0015627:39155-39174 | None:intergenic | 50.0% | |
GCAAGAGTGGGATTATGCTG+AGG | + | tig0015627:39160-39179 | None:intergenic | 50.0% | |
GGTGAACTCAATGAAGAGGC+CGG | - | tig0015627:40493-40512 | Msa1356380:CDS | 50.0% | |
GAGCAACATGTGAGAGAGGC+GGG | + | tig0015627:32388-32407 | None:intergenic | 55.0% | |
TGATGAGTAGTGTGAGCGGG+AGG | + | tig0015627:33242-33261 | None:intergenic | 55.0% | |
AAGGTTCAAGCAAGGCGTGG+AGG | - | tig0015627:33356-33375 | Msa1356380:CDS | 55.0% | |
ATGTTGGGGATGCGATCTGC+GGG | + | tig0015627:33509-33528 | None:intergenic | 55.0% | |
GGGCATGTAGAGGAGAAACC+TGG | - | tig0015627:33899-33918 | Msa1356380:intron | 55.0% | |
CAGGACAGGACATCTATGGG+AGG | + | tig0015627:35107-35126 | None:intergenic | 55.0% | |
GAGCGCAAAGTTTGCAGGAC+AGG | + | tig0015627:35121-35140 | None:intergenic | 55.0% | |
CGCCGTTTGATCCAAGTAGC+CGG | + | tig0015627:35343-35362 | None:intergenic | 55.0% | |
!! | GTGGTGGTAGTGGGTAAGGT+AGG | - | tig0015627:35575-35594 | Msa1356380:intron | 55.0% |
GCACGGTCTGTCCATGTCTT+TGG | + | tig0015627:35683-35702 | None:intergenic | 55.0% | |
CAAAGCCTCTCTGCAAACGG+TGG | + | tig0015627:36292-36311 | None:intergenic | 55.0% | |
CCGTTTGCAGAGAGGCTTTG+TGG | - | tig0015627:36292-36311 | Msa1356380:intron | 55.0% | |
ACAGTCCAGTGCTCTTCCTC+TGG | + | tig0015627:36405-36424 | None:intergenic | 55.0% | |
GAAGTGCAGTCAGTCCCATC+TGG | - | tig0015627:36612-36631 | Msa1356380:intron | 55.0% | |
!! | AGAAATGGGCTGTCGAGCAG+GGG | - | tig0015627:36671-36690 | Msa1356380:intron | 55.0% |
CCAAAAGGGGTGGTCTGTCA+TGG | + | tig0015627:36713-36732 | None:intergenic | 55.0% | |
! | CCATGACAGACCACCCCTTT+TGG | - | tig0015627:36710-36729 | Msa1356380:intron | 55.0% |
AGGGGTGGACGCAATAAAGG+CGG | + | tig0015627:36757-36776 | None:intergenic | 55.0% | |
CGCAATTAGGTGACTAGGGG+TGG | + | tig0015627:36772-36791 | None:intergenic | 55.0% | |
GCACTCCTCACCTTACAAGC+CGG | - | tig0015627:37940-37959 | Msa1356380:intron | 55.0% | |
!! | CGAAACCGGCTTGTAAGGTG+AGG | + | tig0015627:37948-37967 | None:intergenic | 55.0% |
GCACTCCTCACCTTACAAGC+CGG | - | tig0015627:37940-37959 | Msa1356380:intron | 55.0% | |
!! | CGAAACCGGCTTGTAAGGTG+AGG | + | tig0015627:37948-37967 | None:intergenic | 55.0% |
GAGTGGGATTATGCTGAGGG+TGG | + | tig0015627:39156-39175 | None:intergenic | 55.0% | |
TAGCTCACCACGTCTCGTAC+CGG | + | tig0015627:40515-40534 | None:intergenic | 55.0% | |
! | ACAAATGGGTGTGTCGGCCG+AGG | - | tig0015627:32902-32921 | Msa1356380:intron | 60.0% |
TGTTGGGGATGCGATCTGCG+GGG | + | tig0015627:33508-33527 | None:intergenic | 60.0% | |
ACTAAGTGGGGTCGGCTGCA+TGG | + | tig0015627:34078-34097 | None:intergenic | 60.0% | |
ATGCAGCCGACCCCACTTAG+TGG | - | tig0015627:34077-34096 | Msa1356380:intron | 60.0% | |
TGCAGCCGACCCCACTTAGT+GGG | - | tig0015627:34078-34097 | Msa1356380:intron | 60.0% | |
GCCCCCAAGCCTTACCAACT+AGG | - | tig0015627:35312-35331 | Msa1356380:intron | 60.0% | |
GCAGGGGATCAGACCCAGAT+GGG | + | tig0015627:36629-36648 | None:intergenic | 60.0% | |
GAGACGTGGTGAGCTACCCT+AGG | - | tig0015627:40519-40538 | Msa1356380:CDS | 60.0% | |
!! | GAGAGACGGGAGGGTGTCAG+CGG | + | tig0015627:33183-33202 | None:intergenic | 65.0% |
GGCAGGGGATCAGACCCAGA+TGG | + | tig0015627:36630-36649 | None:intergenic | 65.0% | |
CGAGCAGGGGCAGGTTTCAC+AGG | - | tig0015627:36684-36703 | Msa1356380:intron | 65.0% | |
GCAGGGGCAGGTTTCACAGG+AGG | - | tig0015627:36687-36706 | Msa1356380:intron | 65.0% | |
GAAGAGGCCGGTACGAGACG+TGG | - | tig0015627:40505-40524 | Msa1356380:CDS | 65.0% | |
!! | AGACGGGAGGGTGTCAGCGG+AGG | + | tig0015627:33180-33199 | None:intergenic | 70.0% |
! | ATGGGCTGTCGAGCAGGGGC+AGG | - | tig0015627:36675-36694 | Msa1356380:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0015627 | gene | 32381 | 40882 | 32381 | ID=Msa1356380;Name=Msa1356380 |
tig0015627 | mRNA | 32381 | 40882 | 32381 | ID=Msa1356380-mRNA-1;Parent=Msa1356380;Name=Msa1356380-mRNA-1;_AED=0.02;_eAED=0.02;_QI=129|1|1|1|0.8|0.66|6|161|610 |
tig0015627 | exon | 32381 | 32890 | 32381 | ID=Msa1356380-mRNA-1:exon:9869;Parent=Msa1356380-mRNA-1 |
tig0015627 | exon | 33165 | 33382 | 33165 | ID=Msa1356380-mRNA-1:exon:9868;Parent=Msa1356380-mRNA-1 |
tig0015627 | exon | 37404 | 37586 | 37404 | ID=Msa1356380-mRNA-1:exon:9867;Parent=Msa1356380-mRNA-1 |
tig0015627 | exon | 38695 | 38808 | 38695 | ID=Msa1356380-mRNA-1:exon:9866;Parent=Msa1356380-mRNA-1 |
tig0015627 | exon | 39662 | 40679 | 39662 | ID=Msa1356380-mRNA-1:exon:9865;Parent=Msa1356380-mRNA-1 |
tig0015627 | exon | 40803 | 40882 | 40803 | ID=Msa1356380-mRNA-1:exon:9864;Parent=Msa1356380-mRNA-1 |
tig0015627 | five_prime_UTR | 40803 | 40882 | 40803 | ID=Msa1356380-mRNA-1:five_prime_utr;Parent=Msa1356380-mRNA-1 |
tig0015627 | five_prime_UTR | 40631 | 40679 | 40631 | ID=Msa1356380-mRNA-1:five_prime_utr;Parent=Msa1356380-mRNA-1 |
tig0015627 | CDS | 39662 | 40630 | 39662 | ID=Msa1356380-mRNA-1:cds;Parent=Msa1356380-mRNA-1 |
tig0015627 | CDS | 38695 | 38808 | 38695 | ID=Msa1356380-mRNA-1:cds;Parent=Msa1356380-mRNA-1 |
tig0015627 | CDS | 37404 | 37586 | 37404 | ID=Msa1356380-mRNA-1:cds;Parent=Msa1356380-mRNA-1 |
tig0015627 | CDS | 33165 | 33382 | 33165 | ID=Msa1356380-mRNA-1:cds;Parent=Msa1356380-mRNA-1 |
tig0015627 | CDS | 32542 | 32890 | 32542 | ID=Msa1356380-mRNA-1:cds;Parent=Msa1356380-mRNA-1 |
tig0015627 | three_prime_UTR | 32381 | 32541 | 32381 | ID=Msa1356380-mRNA-1:three_prime_utr;Parent=Msa1356380-mRNA-1 |
Gene Sequence |
Protein sequence |