AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1358370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1358370 MtrunA17_Chr7g0228401 80.079 507 73 3 1 482 1 504 0.0 809
Msa1358370 MtrunA17_Chr7g0228531 48.117 478 183 9 1 475 1 416 1.64e-140 410
Msa1358370 MtrunA17_Chr7g0228481 47.908 478 184 10 1 475 1 416 1.50e-137 403
Msa1358370 MtrunA17_Chr1g0177901 62.136 206 74 1 268 473 5 206 7.70e-86 262
Msa1358370 MtrunA17_Chr7g0233161 47.883 307 120 3 4 308 82 350 1.90e-81 256
Msa1358370 MtrunA17_Chr7g0233061 33.974 468 196 10 1 465 1 358 6.45e-69 224
Msa1358370 MtrunA17_Chr4g0046181 44.839 310 131 3 1 308 1 272 7.79e-66 214
Msa1358370 MtrunA17_Chr3g0117511 47.549 204 99 2 206 409 139 334 1.75e-50 178
Msa1358370 MtrunA17_Chr7g0233151 51.765 170 65 4 307 474 1 155 3.03e-48 164
Msa1358370 MtrunA17_Chr4g0058991 52.500 160 67 2 227 386 187 337 7.71e-47 168
Msa1358370 MtrunA17_Chr5g0429661 53.435 131 53 3 260 383 125 254 2.68e-43 156
Msa1358370 MtrunA17_Chr7g0238631 61.000 100 38 1 260 358 116 215 7.39e-36 140
Msa1358370 MtrunA17_Chr1g0157731 53.465 101 46 1 260 359 94 194 2.17e-32 131
Msa1358370 MtrunA17_Chr3g0139671 53.465 101 46 1 260 359 88 188 3.38e-32 130
Msa1358370 MtrunA17_Chr5g0397841 56.842 95 41 0 257 351 110 204 7.06e-31 124
Msa1358370 MtrunA17_Chr4g0022901 40.714 140 78 3 257 393 15 152 8.82e-29 114
Msa1358370 MtrunA17_Chr4g0008551 52.083 96 46 0 260 355 41 136 2.32e-28 115
Msa1358370 MtrunA17_Chr5g0401731 49.057 106 54 0 248 353 6 111 2.28e-27 112
Msa1358370 MtrunA17_Chr4g0046171 49.640 139 53 4 338 474 1 124 3.98e-27 106
Msa1358370 MtrunA17_Chr3g0133601 47.115 104 55 0 250 353 30 133 4.63e-27 108
Msa1358370 MtrunA17_Chr7g0270891 31.282 195 122 4 257 447 14 200 5.84e-27 111
Msa1358370 MtrunA17_Chr4g0053431 50.000 94 47 0 260 353 8 101 9.22e-27 108
Msa1358370 MtrunA17_Chr2g0323351 44.444 117 61 2 257 372 14 127 1.00e-26 108
Msa1358370 MtrunA17_Chr4g0022931 35.811 148 77 3 257 401 15 147 1.12e-26 108
Msa1358370 MtrunA17_Chr4g0022911 43.810 105 56 2 257 358 15 119 2.91e-26 108
Msa1358370 MtrunA17_Chr4g0037141 45.763 118 56 3 254 363 11 128 1.47e-25 105
Msa1358370 MtrunA17_Chr2g0281071 49.485 97 48 1 260 355 18 114 1.64e-25 107
Msa1358370 MtrunA17_Chr1g0211161 46.939 98 51 1 257 353 15 112 2.43e-25 103
Msa1358370 MtrunA17_Chr4g0058631 41.221 131 72 3 257 382 14 144 2.90e-25 106
Msa1358370 MtrunA17_Chr4g0048511 49.485 97 48 1 260 355 18 114 3.53e-25 106
Msa1358370 MtrunA17_Chr8g0385321 45.283 106 56 2 254 357 11 116 4.11e-25 105
Msa1358370 MtrunA17_Chr3g0117091 45.000 100 54 1 257 355 14 113 5.25e-25 105
Msa1358370 MtrunA17_Chr1g0193801 45.918 98 52 1 257 353 14 111 6.91e-25 106
Msa1358370 MtrunA17_Chr5g0410961 44.762 105 57 1 252 355 9 113 8.74e-25 105
Msa1358370 MtrunA17_Chr6g0480581 46.392 97 52 0 255 351 2 98 1.13e-24 102
Msa1358370 MtrunA17_Chr4g0055981 44.860 107 56 2 260 363 60 166 1.15e-24 102
Msa1358370 MtrunA17_Chr8g0342541 41.176 102 59 1 255 355 12 113 1.19e-24 104
Msa1358370 MtrunA17_Chr6g0460661 34.356 163 91 2 251 413 10 156 1.46e-24 99.8
Msa1358370 MtrunA17_Chr5g0435101 45.631 103 55 1 254 355 10 112 1.54e-24 101
Msa1358370 MtrunA17_Chr3g0131121 46.667 105 54 2 255 357 12 116 1.69e-24 103
Msa1358370 MtrunA17_Chr1g0193371 42.241 116 64 2 257 369 14 129 2.04e-24 104
Msa1358370 MtrunA17_Chr2g0328771 42.478 113 60 2 257 364 22 134 2.24e-24 103
Msa1358370 MtrunA17_Chr6g0454921 45.192 104 57 0 250 353 8 111 2.38e-24 100
Msa1358370 MtrunA17_Chr5g0417621 38.255 149 84 2 222 369 106 247 2.60e-24 105
Msa1358370 MtrunA17_Chr7g0254261 32.143 224 112 4 255 467 87 281 2.84e-24 103
Msa1358370 MtrunA17_Chr8g0342521 42.157 102 58 1 255 355 12 113 4.13e-24 103
Msa1358370 MtrunA17_Chr8g0354661 47.321 112 56 2 243 352 25 135 8.70e-24 104
Msa1358370 MtrunA17_Chr5g0397231 46.392 97 51 1 257 352 14 110 9.93e-24 102
Msa1358370 MtrunA17_Chr2g0330041 41.176 102 59 1 255 355 12 113 1.05e-23 102
Msa1358370 MtrunA17_Chr2g0309911 43.750 96 53 1 259 353 15 110 1.11e-23 101
Msa1358370 MtrunA17_Chr5g0395281 47.872 94 48 1 260 352 17 110 1.12e-23 101
Msa1358370 MtrunA17_Chr5g0440781 48.113 106 53 2 254 357 11 116 1.15e-23 98.2
Msa1358370 MtrunA17_Chr3g0099131 48.000 100 51 1 254 352 40 139 1.27e-23 103
Msa1358370 MtrunA17_Chr5g0437321 48.936 94 48 0 260 353 22 115 1.28e-23 100
Msa1358370 MtrunA17_Chr3g0088461 47.000 100 52 1 257 355 24 123 1.29e-23 101
Msa1358370 MtrunA17_Chr1g0154031 48.936 94 47 1 260 352 81 174 1.62e-23 102
Msa1358370 MtrunA17_Chr7g0271241 44.792 96 52 1 257 351 14 109 1.65e-23 102
Msa1358370 MtrunA17_Chr6g0452271 43.689 103 57 1 254 355 11 113 1.66e-23 101
Msa1358370 MtrunA17_Chr7g0274581 44.681 94 51 1 260 352 17 110 1.74e-23 98.2
Msa1358370 MtrunA17_Chr1g0187761 41.964 112 63 2 260 369 17 128 1.96e-23 99.4
Msa1358370 MtrunA17_Chr4g0032401 37.500 144 83 2 257 393 19 162 2.06e-23 100
Msa1358370 MtrunA17_Chr5g0441141 48.113 106 53 2 254 357 11 116 2.10e-23 99.8
Msa1358370 MtrunA17_Chr5g0440761 48.113 106 53 2 254 357 11 116 2.11e-23 99.4
Msa1358370 MtrunA17_Chr3g0115821 44.118 102 56 1 252 352 9 110 2.21e-23 101
Msa1358370 MtrunA17_Chr4g0042501 44.144 111 61 1 260 369 108 218 2.24e-23 102
Msa1358370 MtrunA17_Chr4g0039971 47.872 94 48 1 260 352 18 111 2.68e-23 100
Msa1358370 MtrunA17_Chr3g0080861 47.619 105 53 2 257 359 39 143 2.71e-23 102
Msa1358370 MtrunA17_Chr8g0387421 45.361 97 52 1 257 352 14 110 4.07e-23 99.8
Msa1358370 MtrunA17_Chr7g0275911 48.936 94 47 1 260 352 17 110 6.01e-23 97.8
Msa1358370 MtrunA17_Chr8g0346561 47.872 94 48 1 260 352 17 110 6.10e-23 99.0
Msa1358370 MtrunA17_Chr8g0349261 49.474 95 46 2 260 352 18 112 6.77e-23 98.6
Msa1358370 MtrunA17_Chr4g0044421 42.857 105 59 1 252 355 9 113 7.83e-23 95.9
Msa1358370 MtrunA17_Chr1g0203411 46.809 94 49 1 260 352 17 110 8.25e-23 98.6
Msa1358370 MtrunA17_Chr3g0125801 50.000 92 46 0 260 351 19 110 9.41e-23 98.2
Msa1358370 MtrunA17_Chr8g0342481 39.806 103 60 2 255 355 12 114 9.69e-23 100
Msa1358370 MtrunA17_Chr2g0311221 48.936 94 47 1 260 352 19 112 1.18e-22 98.6
Msa1358370 MtrunA17_Chr7g0261281 45.745 94 50 1 260 352 17 110 1.35e-22 97.4
Msa1358370 MtrunA17_Chr4g0070641 46.809 94 49 1 260 352 17 110 1.39e-22 94.4
Msa1358370 MtrunA17_Chr2g0323411 47.423 97 50 1 260 355 17 113 1.44e-22 98.2
Msa1358370 MtrunA17_Chr1g0167661 45.631 103 53 2 260 359 17 119 2.51e-22 96.3
Msa1358370 MtrunA17_Chr4g0070611 46.809 94 49 1 260 352 17 110 2.54e-22 97.4
Msa1358370 MtrunA17_Chr4g0022891 40.952 105 61 1 257 360 14 118 2.90e-22 95.5
Msa1358370 MtrunA17_Chr4g0042671 45.745 94 50 1 260 352 17 110 2.97e-22 98.6
Msa1358370 MtrunA17_Chr4g0057031 43.137 102 57 1 252 352 9 110 3.93e-22 95.9
Msa1358370 MtrunA17_Chr7g0240821 41.441 111 61 3 260 367 6 115 6.39e-22 94.4
Msa1358370 MtrunA17_Chr1g0167691 45.745 94 50 1 260 352 17 110 1.22e-21 94.4
Msa1358370 MtrunA17_Chr5g0417821 44.118 102 56 1 251 351 3 104 1.54e-21 94.7
Msa1358370 MtrunA17_Chr6g0460671 47.253 91 48 0 260 350 102 192 1.95e-21 95.5
Msa1358370 MtrunA17_Chr7g0217741 45.745 94 50 1 260 352 17 110 2.23e-21 94.7
Msa1358370 MtrunA17_Chr5g0434571 45.745 94 50 1 260 352 53 146 2.50e-21 95.1
Msa1358370 MtrunA17_Chr8g0362231 40.909 110 63 1 260 367 25 134 4.10e-21 95.5
Msa1358370 MtrunA17_Chr5g0441131 45.192 104 55 2 254 355 8 111 4.17e-21 90.9
Msa1358370 MtrunA17_Chr1g0151941 43.158 95 52 2 260 352 17 111 4.58e-21 92.4
Msa1358370 MtrunA17_Chr4g0022881 40.404 99 58 1 255 352 12 110 5.71e-21 91.7
Msa1358370 MtrunA17_Chr5g0416341 45.161 93 51 0 260 352 29 121 6.24e-21 95.5
Msa1358370 MtrunA17_Chr2g0327351 38.983 118 70 2 254 369 11 128 7.01e-21 93.2
Msa1358370 MtrunA17_Chr3g0110351 34.545 165 101 4 260 421 17 177 7.16e-21 93.2
Msa1358370 MtrunA17_Chr3g0135311 36.424 151 91 4 254 399 11 161 7.70e-21 93.6
Msa1358370 MtrunA17_Chr5g0434931 40.000 100 59 1 257 355 37 136 1.38e-20 91.7
Msa1358370 MtrunA17_Chr8g0343831 42.424 99 56 1 255 352 8 106 1.39e-20 91.3
Msa1358370 MtrunA17_Chr3g0103281 42.000 100 57 1 254 352 11 110 1.63e-20 92.4
Msa1358370 MtrunA17_Chr3g0121241 41.489 94 54 1 260 352 47 140 2.51e-20 91.3
Msa1358370 MtrunA17_Chr1g0152011 38.333 120 71 3 254 370 11 130 2.62e-20 92.0
Msa1358370 MtrunA17_Chr7g0247131 50.667 75 35 1 280 352 2 76 2.94e-20 90.5
Msa1358370 MtrunA17_Chr3g0104491 51.250 80 35 1 307 382 17 96 2.98e-20 90.9
Msa1358370 MtrunA17_Chr4g0028311 42.991 107 58 3 260 363 17 123 3.96e-20 91.3
Msa1358370 MtrunA17_Chr7g0228991 40.206 97 57 1 257 352 31 127 4.03e-20 90.1
Msa1358370 MtrunA17_Chr1g0192411 37.956 137 75 2 257 392 14 141 6.38e-20 91.7
Msa1358370 MtrunA17_Chr1g0209661 40.541 111 61 2 260 365 32 142 6.63e-20 90.5
Msa1358370 MtrunA17_Chr7g0228891 43.617 94 52 1 260 352 17 110 7.33e-20 89.4
Msa1358370 MtrunA17_Chr1g0203441 43.299 97 54 1 257 352 15 111 8.63e-20 89.4
Msa1358370 MtrunA17_Chr5g0400821 41.964 112 62 3 254 362 11 122 8.85e-20 90.1
Msa1358370 MtrunA17_Chr5g0434911 40.000 100 59 1 257 355 23 122 1.22e-19 89.0
Msa1358370 MtrunA17_Chr1g0180391 42.000 100 57 1 254 352 18 117 1.45e-19 87.8
Msa1358370 MtrunA17_Chr7g0220341 40.777 103 58 1 253 352 23 125 1.55e-19 88.6
Msa1358370 MtrunA17_Chr4g0013361 32.500 160 99 4 260 410 15 174 1.62e-19 89.0
Msa1358370 MtrunA17_Chr7g0228231 42.553 94 53 1 260 352 19 112 1.71e-19 87.0
Msa1358370 MtrunA17_Chr6g0470971 40.187 107 63 1 257 362 16 122 1.96e-19 88.6
Msa1358370 MtrunA17_Chr5g0434841 41.000 100 58 1 257 355 22 121 2.23e-19 89.0
Msa1358370 MtrunA17_Chr8g0334881 43.000 100 55 2 260 357 15 114 2.35e-19 89.0
Msa1358370 MtrunA17_Chr6g0453471 42.553 94 53 1 260 352 17 110 2.60e-19 89.4
Msa1358370 MtrunA17_Chr4g0054391 41.000 100 57 2 254 351 11 110 2.66e-19 88.2
Msa1358370 MtrunA17_Chr4g0068061 41.000 100 58 1 257 355 14 113 2.73e-19 89.0
Msa1358370 MtrunA17_Chr5g0434831 40.206 97 57 1 260 355 12 108 3.98e-19 85.5
Msa1358370 MtrunA17_Chr1g0168661 37.705 122 69 3 260 375 26 146 4.33e-19 87.0
Msa1358370 MtrunA17_Chr6g0450101 37.273 110 67 2 260 367 19 128 5.68e-19 85.5
Msa1358370 MtrunA17_Chr7g0217221 43.617 94 52 1 260 352 17 110 5.77e-19 86.7
Msa1358370 MtrunA17_Chr4g0030881 39.640 111 59 1 260 362 12 122 6.38e-19 86.7
Msa1358370 MtrunA17_Chr1g0186061 41.489 94 54 1 260 352 25 118 6.86e-19 86.3
Msa1358370 MtrunA17_Chr7g0264641 41.584 101 57 2 254 352 11 111 7.81e-19 86.7
Msa1358370 MtrunA17_Chr2g0322521 50.000 94 46 1 260 352 34 127 8.94e-19 88.2
Msa1358370 MtrunA17_Chr2g0327821 39.316 117 67 2 260 375 11 124 1.25e-18 85.1
Msa1358370 MtrunA17_Chr5g0421201 52.941 85 34 2 309 392 12 91 1.55e-18 83.6
Msa1358370 MtrunA17_Chr4g0060721 40.777 103 55 3 260 358 18 118 2.77e-18 85.9
Msa1358370 MtrunA17_Chr5g0434901 48.485 66 34 0 290 355 9 74 2.98e-18 80.5
Msa1358370 MtrunA17_Chr4g0072751 42.574 101 56 2 254 352 11 111 3.98e-18 85.9
Msa1358370 MtrunA17_Chr7g0254411 42.574 101 56 2 260 358 17 117 5.78e-18 85.1
Msa1358370 MtrunA17_Chr6g0453211 40.426 94 55 1 260 352 17 110 1.31e-17 83.6
Msa1358370 MtrunA17_Chr8g0360111 40.206 97 57 1 257 352 27 123 1.40e-17 82.4
Msa1358370 MtrunA17_Chr1g0194301 30.612 196 121 6 260 445 38 228 1.41e-17 82.8
Msa1358370 MtrunA17_Chr3g0092401 41.237 97 56 1 260 355 18 114 1.48e-17 83.6
Msa1358370 MtrunA17_Chr1g0194951 43.617 94 52 1 260 352 17 110 2.51e-17 83.6
Msa1358370 MtrunA17_Chr3g0099141 36.937 111 69 1 227 336 12 122 3.69e-17 78.2
Msa1358370 MtrunA17_Chr1g0194291 39.048 105 63 1 249 352 15 119 6.32e-17 80.9
Msa1358370 MtrunA17_Chr3g0104501 55.357 56 25 0 253 308 129 184 3.34e-16 77.0
Msa1358370 MtrunA17_Chr2g0323321 39.474 76 45 1 260 334 16 91 4.26e-16 74.3
Msa1358370 MtrunA17_Chr2g0293911 35.772 123 71 2 231 352 7 122 4.34e-16 79.3
Msa1358370 MtrunA17_Chr7g0269831 44.531 128 60 4 257 381 14 133 6.92e-16 79.0
Msa1358370 MtrunA17_Chr7g0229101 46.970 66 35 0 290 355 8 73 1.16e-15 75.9
Msa1358370 MtrunA17_Chr3g0093811 42.500 80 42 2 277 352 1 80 2.23e-15 76.3
Msa1358370 MtrunA17_Chr7g0238651 31.138 167 97 4 260 415 10 169 3.12e-15 77.0
Msa1358370 MtrunA17_Chr6g0487491 36.893 103 55 3 260 352 17 119 4.39e-15 75.5
Msa1358370 MtrunA17_Chr5g0425591 45.238 84 44 2 254 335 8 91 4.73e-15 70.9
Msa1358370 MtrunA17_Chr4g0068921 40.404 99 58 1 260 357 29 127 5.95e-15 73.6
Msa1358370 MtrunA17_Chr5g0395221 43.056 72 40 1 260 330 17 88 3.83e-14 67.8
Msa1358370 MtrunA17_Chr7g0229131 43.939 66 37 0 290 355 8 73 6.78e-14 69.7
Msa1358370 MtrunA17_Chr4g0042611 40.278 72 42 1 260 330 17 88 1.05e-13 66.6
Msa1358370 MtrunA17_Chr8g0342511 36.111 72 45 1 259 329 16 87 3.69e-13 65.5
Msa1358370 MtrunA17_Chr8g0342531 34.177 79 51 1 259 336 16 94 4.41e-13 67.4
Msa1358370 MtrunA17_Chr7g0274481 36.957 92 57 1 259 350 9 99 7.30e-13 71.2
Msa1358370 MtrunA17_Chr8g0342471 35.897 78 48 2 256 331 13 90 1.16e-12 65.5
Msa1358370 MtrunA17_Chr6g0483051 35.165 91 58 1 260 350 72 161 1.28e-12 70.1
Msa1358370 MtrunA17_Chr6g0483051 39.362 94 56 1 257 350 120 212 1.86e-12 69.7
Msa1358370 MtrunA17_Chr8g0342461 36.000 75 46 2 259 331 16 90 2.56e-12 64.3
Msa1358370 MtrunA17_Chr5g0397691 35.417 96 59 1 255 350 5 97 1.91e-11 66.2
Msa1358370 MtrunA17_Chr6g0453751 38.372 86 43 3 260 335 25 110 8.78e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1358370 AT4G18770.1 64.754 122 42 1 260 381 220 340 7.36e-48 171
Msa1358370 AT3G27785.1 48.649 185 85 4 208 386 141 321 9.17e-47 168
Msa1358370 AT5G40360.1 55.385 130 55 2 260 387 161 289 4.44e-42 153
Msa1358370 AT5G58850.1 44.848 165 75 2 254 402 102 266 1.73e-40 151
Msa1358370 AT5G11050.1 47.826 161 72 2 205 365 65 213 1.88e-40 150
Msa1358370 AT2G25230.1 52.033 123 58 1 260 382 29 150 5.42e-36 133
Msa1358370 AT3G09370.1 61.702 94 36 0 260 353 133 226 3.03e-35 137
Msa1358370 AT3G09370.2 61.702 94 36 0 260 353 138 231 3.62e-35 137
Msa1358370 AT3G09370.3 61.702 94 36 0 260 353 146 239 5.99e-35 137
Msa1358370 AT5G11510.3 55.446 101 44 1 260 359 84 184 2.00e-34 137
Msa1358370 AT5G11510.1 55.446 101 44 1 260 359 84 184 2.00e-34 137
Msa1358370 AT5G11510.4 55.446 101 44 1 260 359 84 184 2.00e-34 137
Msa1358370 AT5G11510.2 55.446 101 44 1 260 359 84 184 2.11e-34 137
Msa1358370 AT5G11510.5 55.446 101 44 1 260 359 84 184 2.20e-34 137
Msa1358370 AT5G02320.1 60.638 94 37 0 260 353 130 223 5.17e-34 135
Msa1358370 AT5G02320.2 60.638 94 37 0 260 353 130 223 5.17e-34 135
Msa1358370 AT5G02320.3 60.638 94 37 0 260 353 70 163 6.17e-34 134
Msa1358370 AT5G40430.1 45.865 133 68 3 251 382 48 177 2.07e-32 124
Msa1358370 AT4G32730.5 53.465 101 46 1 260 359 90 190 3.38e-32 131
Msa1358370 AT4G32730.4 53.465 101 46 1 260 359 90 190 3.38e-32 131
Msa1358370 AT4G32730.3 53.465 101 46 1 260 359 90 190 3.38e-32 131
Msa1358370 AT4G32730.2 53.465 101 46 1 260 359 90 190 3.38e-32 131
Msa1358370 AT4G32730.1 53.465 101 46 1 260 359 90 190 4.67e-32 130
Msa1358370 AT4G00540.2 53.333 105 45 2 257 357 103 207 2.23e-27 114
Msa1358370 AT4G00540.2 35.644 101 56 3 260 351 49 149 2.54e-11 65.9
Msa1358370 AT4G00540.1 44.521 146 64 4 216 357 73 205 4.54e-27 113
Msa1358370 AT4G00540.1 35.644 101 56 3 260 351 47 147 3.99e-11 65.5
Msa1358370 AT3G55730.1 53.125 96 45 0 260 355 59 154 1.56e-26 111
Msa1358370 AT1G57560.2 33.333 183 94 4 257 435 14 172 2.95e-26 108
Msa1358370 AT4G38620.1 48.544 103 52 1 254 355 11 113 9.93e-26 106
Msa1358370 AT4G33450.1 53.933 89 41 0 260 348 22 110 1.40e-25 105
Msa1358370 AT3G28470.1 46.000 100 53 1 254 352 11 110 2.22e-25 106
Msa1358370 AT3G09230.1 50.000 96 48 0 260 355 58 153 2.57e-25 107
Msa1358370 AT4G21440.1 50.515 97 47 1 260 355 17 113 2.67e-25 107
Msa1358370 AT1G22640.1 49.515 103 50 2 257 357 14 116 4.47e-25 104
Msa1358370 AT5G12870.1 46.729 107 55 2 257 361 20 126 8.41e-25 104
Msa1358370 AT3G11440.2 50.000 94 46 1 260 352 46 139 9.19e-25 107
Msa1358370 AT5G67300.1 50.000 94 47 0 260 353 9 102 1.08e-24 104
Msa1358370 AT4G01680.1 39.062 128 66 3 257 381 14 132 1.19e-24 105
Msa1358370 AT3G50060.1 48.936 94 48 0 260 353 9 102 1.24e-24 104
Msa1358370 AT4G01680.3 39.062 128 66 3 257 381 14 132 1.29e-24 102
Msa1358370 AT4G09460.1 46.226 106 55 2 254 357 11 116 1.41e-24 102
Msa1358370 AT1G57560.1 45.918 98 52 1 257 353 14 111 1.61e-24 103
Msa1358370 AT4G37260.1 51.064 94 46 0 260 353 16 109 2.40e-24 103
Msa1358370 AT3G11440.3 50.000 94 46 1 260 352 46 139 2.53e-24 106
Msa1358370 AT3G11440.4 50.000 94 46 1 260 352 46 139 2.53e-24 106
Msa1358370 AT3G11440.1 50.000 94 46 1 260 352 46 139 2.53e-24 106
Msa1358370 AT5G14750.1 46.392 97 51 1 257 352 18 114 3.03e-24 100
Msa1358370 AT4G28110.1 47.423 97 50 1 260 355 17 113 5.06e-24 102
Msa1358370 AT1G09540.1 45.918 98 52 1 257 353 14 111 5.29e-24 103
Msa1358370 AT4G34990.1 44.915 118 57 3 254 363 11 128 5.49e-24 101
Msa1358370 AT3G13890.2 42.000 100 57 1 257 355 14 113 5.53e-24 103
Msa1358370 AT1G69560.1 46.939 98 52 0 254 351 104 201 7.11e-24 102
Msa1358370 AT5G26660.1 44.000 100 55 1 257 355 14 113 7.32e-24 102
Msa1358370 AT1G69560.2 46.939 98 52 0 254 351 120 217 7.32e-24 102
Msa1358370 AT1G17950.1 45.361 97 53 0 255 351 3 99 7.54e-24 100
Msa1358370 AT2G23290.1 48.077 104 54 0 250 353 6 109 7.89e-24 102
Msa1358370 AT4G01680.2 36.429 140 65 3 257 381 14 144 1.04e-23 102
Msa1358370 AT3G13890.1 39.450 109 56 1 257 355 14 122 1.16e-23 102
Msa1358370 AT5G40330.1 42.718 103 58 1 251 352 8 110 1.29e-23 99.4
Msa1358370 AT3G12720.1 43.750 96 53 1 259 353 26 121 1.30e-23 101
Msa1358370 AT1G26780.1 45.045 111 60 1 260 369 101 211 1.49e-23 100
Msa1358370 AT3G29020.2 47.423 97 51 0 255 351 65 161 1.61e-23 101
Msa1358370 AT3G08500.1 46.000 100 53 1 257 355 32 131 1.65e-23 101
Msa1358370 AT2G26960.1 42.241 116 66 1 256 370 21 136 1.66e-23 103
Msa1358370 AT5G10280.1 47.872 94 48 1 260 352 17 110 1.68e-23 101
Msa1358370 AT4G26930.1 46.809 94 49 1 260 352 24 117 1.69e-23 102
Msa1358370 AT3G29020.1 47.423 97 51 0 255 351 63 159 1.77e-23 99.4
Msa1358370 AT1G26780.2 45.045 111 60 1 260 369 101 211 2.16e-23 101
Msa1358370 AT4G05100.1 47.423 97 50 1 260 355 18 114 2.35e-23 100
Msa1358370 AT5G17800.1 46.392 97 52 0 255 351 91 187 2.57e-23 100
Msa1358370 AT1G63910.1 47.423 97 50 1 257 352 14 110 3.47e-23 101
Msa1358370 AT5G16770.4 36.601 153 72 4 260 407 17 149 3.68e-23 100
Msa1358370 AT5G16770.3 36.601 153 72 4 260 407 17 149 3.68e-23 100
Msa1358370 AT5G16770.1 36.601 153 72 4 260 407 17 149 4.10e-23 100
Msa1358370 AT5G16770.2 36.601 153 72 4 260 407 17 149 4.10e-23 100
Msa1358370 AT2G16720.1 47.000 100 51 2 260 357 17 116 4.16e-23 99.0
Msa1358370 AT5G52600.1 44.144 111 58 2 259 368 16 123 4.66e-23 97.1
Msa1358370 AT5G06100.1 47.872 94 48 1 260 352 37 130 4.89e-23 102
Msa1358370 AT5G55020.1 45.455 99 53 1 260 357 31 129 5.84e-23 102
Msa1358370 AT3G61250.1 46.809 94 49 1 260 352 17 110 7.17e-23 99.0
Msa1358370 AT1G16490.1 44.860 107 57 2 260 364 19 125 9.12e-23 98.2
Msa1358370 AT5G06100.5 47.872 94 48 1 260 352 37 130 1.04e-22 101
Msa1358370 AT5G06100.2 47.872 94 48 1 260 352 37 130 1.04e-22 101
Msa1358370 AT5G06100.3 47.872 94 48 1 260 352 37 130 1.04e-22 101
Msa1358370 AT5G06100.4 47.872 94 48 1 260 352 37 130 1.04e-22 101
Msa1358370 AT2G39880.1 45.833 96 52 0 260 355 53 148 2.48e-22 99.0
Msa1358370 AT3G23250.1 33.898 177 106 6 260 430 17 188 2.61e-22 97.1
Msa1358370 AT1G35515.1 42.718 103 57 2 257 357 14 116 2.73e-22 95.5
Msa1358370 AT1G56160.1 45.745 94 50 1 260 352 19 112 2.78e-22 97.4
Msa1358370 AT5G65230.1 44.118 102 56 1 252 352 9 110 2.86e-22 97.4
Msa1358370 AT2G32460.1 46.392 97 51 1 260 355 23 119 2.89e-22 100
Msa1358370 AT4G12350.1 44.681 94 51 1 260 352 17 110 2.90e-22 97.1
Msa1358370 AT2G32460.2 46.392 97 51 1 260 355 11 107 3.18e-22 99.8
Msa1358370 AT3G02940.2 45.361 97 52 1 260 355 17 113 3.37e-22 97.4
Msa1358370 AT1G79180.1 47.368 95 47 2 260 352 19 112 3.99e-22 97.1
Msa1358370 AT3G27920.1 44.330 97 53 1 257 352 16 112 4.08e-22 95.1
Msa1358370 AT3G02940.1 45.361 97 52 1 260 355 17 113 4.61e-22 97.1
Msa1358370 AT3G02940.3 45.361 97 52 1 260 355 17 113 4.61e-22 97.1
Msa1358370 AT4G22680.1 44.118 102 56 1 252 352 9 110 6.42e-22 95.5
Msa1358370 AT3G01530.1 32.683 205 120 7 232 418 1 205 6.51e-22 94.0
Msa1358370 AT1G34670.1 44.681 94 51 1 260 352 17 110 6.97e-22 97.4
Msa1358370 AT5G60890.1 45.631 103 55 1 251 352 8 110 1.30e-21 95.5
Msa1358370 AT4G17785.2 42.268 97 55 1 260 355 18 114 1.38e-21 96.3
Msa1358370 AT1G73410.1 43.636 110 61 1 255 363 4 113 1.40e-21 94.0
Msa1358370 AT1G74430.1 45.263 95 51 1 260 353 17 111 1.48e-21 94.7
Msa1358370 AT4G17785.1 42.000 100 57 1 257 355 15 114 1.49e-21 96.3
Msa1358370 AT5G54230.1 45.745 94 50 1 260 352 17 110 1.77e-21 95.5
Msa1358370 AT1G73410.2 43.636 110 61 1 255 363 4 113 1.93e-21 92.8
Msa1358370 AT3G13540.1 42.268 97 55 1 260 355 28 124 1.98e-21 94.0
Msa1358370 AT5G57620.1 40.833 120 67 3 254 369 11 130 2.59e-21 95.1
Msa1358370 AT1G66230.1 45.263 95 49 2 260 352 17 110 6.28e-21 93.2
Msa1358370 AT5G07690.1 44.118 102 56 1 257 357 14 115 7.29e-21 94.0
Msa1358370 AT1G14350.2 34.000 150 92 3 260 402 28 177 8.73e-21 95.1
Msa1358370 AT1G14350.1 34.000 150 92 3 260 402 28 177 8.73e-21 95.1
Msa1358370 AT5G56110.1 43.000 100 56 1 254 352 11 110 1.14e-20 93.2
Msa1358370 AT5G35550.1 41.880 117 63 3 240 355 3 115 1.64e-20 91.3
Msa1358370 AT1G06180.1 42.553 94 53 1 260 352 17 110 1.72e-20 90.9
Msa1358370 AT2G02820.2 33.679 193 103 6 260 431 33 221 1.94e-20 94.4
Msa1358370 AT3G48920.1 44.898 98 51 2 257 352 20 116 2.64e-20 90.9
Msa1358370 AT1G18570.1 42.308 104 59 1 250 352 8 111 2.84e-20 92.4
Msa1358370 AT3G53200.1 37.681 138 78 4 260 390 14 150 3.16e-20 90.1
Msa1358370 AT2G02820.1 34.211 190 106 7 260 431 33 221 3.43e-20 93.6
Msa1358370 AT5G07700.1 44.330 97 53 1 257 352 14 110 3.62e-20 92.0
Msa1358370 AT5G07700.2 44.330 97 53 1 257 352 14 110 3.62e-20 92.0
Msa1358370 AT5G23000.1 44.898 98 52 2 260 355 17 114 4.75e-20 91.7
Msa1358370 AT5G61420.2 44.330 97 53 1 257 352 14 110 4.84e-20 92.0
Msa1358370 AT2G31180.1 42.553 94 53 1 260 352 17 110 5.22e-20 89.7
Msa1358370 AT5G15310.4 42.553 94 53 1 260 352 17 110 5.65e-20 89.7
Msa1358370 AT4G37780.1 43.158 95 52 2 260 352 17 111 5.66e-20 90.9
Msa1358370 AT2G02820.3 41.284 109 61 2 260 365 33 141 5.87e-20 91.3
Msa1358370 AT1G74080.1 43.299 97 54 1 257 352 14 110 6.27e-20 91.3
Msa1358370 AT2G26950.1 33.835 133 79 2 243 370 4 132 6.62e-20 91.7
Msa1358370 AT1G66370.1 44.211 95 50 2 260 352 13 106 8.30e-20 89.0
Msa1358370 AT5G15310.1 42.553 94 53 1 260 352 17 110 8.43e-20 90.9
Msa1358370 AT5G15310.2 42.553 94 53 1 260 352 17 110 9.28e-20 90.5
Msa1358370 AT3G01140.2 42.553 94 53 1 260 352 17 110 1.21e-19 90.5
Msa1358370 AT5G26660.2 44.318 88 38 1 268 355 6 82 1.35e-19 90.1
Msa1358370 AT3G01140.1 42.553 94 53 1 260 352 60 153 1.71e-19 90.5
Msa1358370 AT3G62610.1 44.330 97 53 1 257 352 14 110 1.90e-19 90.1
Msa1358370 AT2G47190.1 42.000 100 57 1 254 352 19 118 1.95e-19 88.6
Msa1358370 AT5G16600.1 45.263 95 49 2 260 352 17 110 2.69e-19 89.4
Msa1358370 AT5G39700.1 43.011 93 53 0 260 352 59 151 3.03e-19 85.9
Msa1358370 AT5G65790.1 43.119 109 58 3 254 358 11 119 3.71e-19 89.4
Msa1358370 AT5G62470.1 41.935 93 54 0 260 352 17 109 4.25e-19 89.0
Msa1358370 AT5G14750.3 50.794 63 31 0 290 352 18 80 5.50e-19 84.7
Msa1358370 AT4G25560.1 43.299 97 54 1 257 352 12 108 5.67e-19 87.4
Msa1358370 AT3G24310.1 41.489 94 54 1 260 352 23 116 6.81e-19 87.0
Msa1358370 AT5G62320.1 41.739 115 58 3 252 357 10 124 7.56e-19 86.3
Msa1358370 AT5G59780.3 43.299 97 54 1 260 355 13 109 1.00e-18 85.9
Msa1358370 AT3G46130.1 44.330 97 53 1 260 355 14 110 1.23e-18 85.9
Msa1358370 AT3G27810.1 39.216 102 61 1 252 352 17 118 1.56e-18 85.1
Msa1358370 AT3G47600.1 29.474 190 105 4 252 415 9 195 1.82e-18 87.0
Msa1358370 AT3G12820.1 42.553 94 53 1 260 352 19 112 1.94e-18 85.1
Msa1358370 AT3G30210.1 37.963 108 65 2 260 365 32 139 2.05e-18 85.9
Msa1358370 AT3G49690.1 42.574 101 56 2 254 352 11 111 2.06e-18 86.3
Msa1358370 AT4G13480.1 41.489 94 54 1 260 352 11 104 2.33e-18 85.1
Msa1358370 AT5G35550.2 54.545 66 30 0 290 355 53 118 2.68e-18 85.1
Msa1358370 AT1G79180.2 36.496 137 52 4 260 361 19 155 2.68e-18 86.3
Msa1358370 AT2G47460.1 36.585 123 75 2 260 379 17 139 2.75e-18 87.0
Msa1358370 AT5G49330.1 41.489 94 54 1 260 352 17 110 3.96e-18 85.9
Msa1358370 AT1G68320.1 38.739 111 63 2 260 365 24 134 4.43e-18 85.1
Msa1358370 AT3G60460.1 41.000 100 57 2 260 357 16 115 5.12e-18 85.1
Msa1358370 AT5G40350.1 40.426 94 55 1 260 352 22 115 6.10e-18 82.8
Msa1358370 AT1G08810.1 40.541 111 64 2 260 368 17 127 6.44e-18 84.3
Msa1358370 AT2G36890.1 40.708 113 64 3 254 363 11 123 8.52e-18 84.3
Msa1358370 AT5G62470.2 41.489 94 54 1 260 352 17 110 1.22e-17 84.7
Msa1358370 AT1G48000.1 40.426 94 55 1 260 352 37 130 1.22e-17 82.8
Msa1358370 AT3G28910.1 41.584 101 57 2 260 358 17 117 1.63e-17 84.0
Msa1358370 AT1G66380.1 45.918 98 50 2 257 352 10 106 1.67e-17 79.7
Msa1358370 AT2G36890.2 40.708 113 64 3 254 363 52 164 1.73e-17 84.0
Msa1358370 AT5G14340.1 39.362 94 56 1 260 352 29 122 1.79e-17 82.8
Msa1358370 AT1G74650.1 40.196 102 60 1 252 352 9 110 2.59e-17 83.6
Msa1358370 AT1G18710.1 37.895 95 58 1 260 353 17 111 4.47e-17 81.6
Msa1358370 AT1G25340.1 41.489 94 54 1 260 352 23 116 6.36e-17 81.6
Msa1358370 AT3G53200.2 40.566 106 58 2 290 390 12 117 7.64e-17 79.7
Msa1358370 AT5G52260.1 37.719 114 70 1 257 369 14 127 8.55e-17 80.9
Msa1358370 AT3G18100.1 40.625 96 57 0 255 350 544 639 1.82e-16 82.8
Msa1358370 AT3G18100.1 40.385 104 58 3 250 350 486 588 1.84e-15 79.7
Msa1358370 AT3G18100.1 38.739 111 59 4 260 368 445 548 9.99e-13 71.2
Msa1358370 AT3G18100.3 40.625 96 57 0 255 350 496 591 2.66e-16 82.4
Msa1358370 AT3G18100.3 40.385 104 58 3 250 350 438 540 3.03e-15 79.0
Msa1358370 AT3G18100.3 38.739 111 59 4 260 368 397 500 1.40e-12 70.5
Msa1358370 AT1G25340.2 40.860 93 51 1 260 352 23 111 2.82e-16 79.3
Msa1358370 AT3G18100.4 40.625 96 57 0 255 350 383 478 2.99e-16 82.0
Msa1358370 AT3G18100.4 40.385 104 58 3 250 350 325 427 3.19e-15 79.0
Msa1358370 AT3G18100.4 38.739 111 59 4 260 368 284 387 1.86e-12 70.1
Msa1358370 AT3G18100.2 40.625 96 57 0 255 350 331 426 4.24e-16 81.6
Msa1358370 AT3G18100.2 40.385 104 58 3 250 350 273 375 4.70e-15 78.2
Msa1358370 AT3G18100.2 38.739 111 59 4 260 368 232 335 2.62e-12 69.7
Msa1358370 AT1G25340.3 40.860 93 51 1 260 352 23 111 6.23e-16 79.0
Msa1358370 AT3G12820.2 50.794 63 31 0 290 352 2 64 9.64e-16 75.9
Msa1358370 AT1G56650.1 44.898 98 51 2 257 352 10 106 1.04e-15 77.4
Msa1358370 AT3G27810.2 46.032 63 34 0 290 352 7 69 1.26e-15 75.5
Msa1358370 AT1G22640.3 58.621 58 23 1 301 357 2 59 1.91e-15 75.5
Msa1358370 AT5G49620.1 37.500 104 64 1 250 352 21 124 4.29e-15 76.6
Msa1358370 AT1G66390.1 44.898 98 51 2 257 352 10 106 4.64e-15 75.5
Msa1358370 AT5G40350.2 46.032 63 34 0 290 352 8 70 4.66e-15 73.6
Msa1358370 AT3G06490.1 38.000 100 61 1 252 350 16 115 2.16e-14 74.7
Msa1358370 AT3G47600.2 30.464 151 77 3 290 415 42 189 2.37e-14 74.3
Msa1358370 AT2G37630.1 34.783 138 85 3 260 393 7 143 2.73e-14 74.7
Msa1358370 AT5G59780.2 45.455 66 36 0 290 355 23 88 3.60e-14 72.0
Msa1358370 AT3G46130.3 45.455 66 36 0 290 355 13 78 7.04e-14 71.2
Msa1358370 AT3G46130.4 45.455 66 36 0 290 355 23 88 7.75e-14 71.6
Msa1358370 AT1G71030.2 43.939 66 36 1 293 357 5 70 7.99e-14 70.1
Msa1358370 AT1G71030.1 43.939 66 36 1 293 357 19 84 9.69e-14 70.5
Msa1358370 AT1G14350.3 34.821 112 66 3 298 402 23 134 2.02e-13 72.4
Msa1358370 AT1G14350.4 34.821 112 66 3 298 402 23 134 2.02e-13 72.4
Msa1358370 AT5G14750.4 48.077 52 27 0 301 352 2 53 3.84e-13 67.0
Msa1358370 AT5G14750.2 48.077 52 27 0 301 352 2 53 3.84e-13 67.0
Msa1358370 AT1G66380.3 52.381 63 30 0 290 352 11 73 4.77e-13 65.9
Msa1358370 AT3G23250.2 41.333 75 41 2 301 372 2 76 1.19e-12 67.8
Msa1358370 AT1G09770.1 36.957 92 57 1 259 350 9 99 1.29e-12 70.9
Msa1358370 AT5G49620.2 33.051 118 64 2 250 352 21 138 6.39e-12 67.0

Find 111 sgRNAs with CRISPR-Local

Find 172 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATACTGGCAAAGAAATT+TGG 0.124711 tig0016240:-4417 Msa1358370:CDS
TAATACTGACAAAGGAATTT+TGG 0.134982 tig0016240:-4302 Msa1358370:CDS
GGGTATGGCACAATGAATTA+TGG 0.245222 tig0016240:-2147 Msa1358370:CDS
TTGTTTGGTGTAAAGGTTAC+TGG 0.246591 tig0016240:+4469 None:intergenic
AAATTCCTTTGTCAGTATTA+AGG 0.278091 tig0016240:+4305 None:intergenic
AAATTTCTTTGCCAGTATTA+AGG 0.278768 tig0016240:+4419 None:intergenic
CATGGCTAACCAAGACTTTA+GGG 0.299977 tig0016240:-4602 Msa1358370:CDS
TAATACTGGCAAAGAAATTT+GGG 0.309003 tig0016240:-4416 Msa1358370:CDS
CCCACCAATGCAAGAAATAT+TGG 0.311244 tig0016240:+4159 None:intergenic
GTGTAAAGGTTACTGGAATT+TGG 0.313633 tig0016240:+4476 None:intergenic
ACATGGCTAACCAAGACTTT+AGG 0.330248 tig0016240:-4603 Msa1358370:CDS
CAACAAAATCTCTTTCAATA+TGG 0.332090 tig0016240:-4271 Msa1358370:CDS
CGCAATCTGCACTATGTTCA+TGG 0.332854 tig0016240:+2332 None:intergenic
CCATCTTCAACCGGACATTA+AGG 0.338665 tig0016240:-3680 Msa1358370:intron
ATGTTCCTCTCAAACTATTT+CGG 0.338788 tig0016240:+2418 None:intergenic
TTTGTTATTGTTTGGTGTAA+AGG 0.341775 tig0016240:+4462 None:intergenic
CTCAAACTATTTCGGCGGTT+TGG 0.351317 tig0016240:+2426 None:intergenic
AAAATCGCTCTGGGATCTAT+TGG 0.362990 tig0016240:+4507 None:intergenic
CACCCCTGTATGAAGGGGTT+GGG 0.365445 tig0016240:+4536 None:intergenic
ATCAAAGCTCACAAGATGAT+TGG 0.378576 tig0016240:-2552 Msa1358370:CDS
ATGCATGAACACCTTAATAC+TGG 0.383219 tig0016240:-4430 Msa1358370:CDS
TTGTAGGAATCTTGTCCAAT+TGG 0.401670 tig0016240:-3791 Msa1358370:intron
GGAGTTCCAGCGGTTCTTGA+TGG 0.404645 tig0016240:+2479 None:intergenic
GAGTCCTTCATCATTGTGTT+GGG 0.424668 tig0016240:+4123 None:intergenic
TGATCCCAACCCCTTCATAC+AGG 0.428255 tig0016240:-4540 Msa1358370:CDS
GGTTGCAAGAGAACCATTGC+GGG 0.430044 tig0016240:+4709 None:intergenic
CAAGCCAATATTTCTTGCAT+TGG 0.432718 tig0016240:-4163 Msa1358370:CDS
GAGATTGCTAAGTTTATGAA+TGG 0.435455 tig0016240:-3739 Msa1358370:CDS
TGGTGAAACTTCACAATCTC+AGG 0.440048 tig0016240:-4251 Msa1358370:CDS
GAAATATTGGCTTGAAGCCT+AGG 0.446132 tig0016240:+4172 None:intergenic
TGAGTCCTTCATCATTGTGT+TGG 0.460851 tig0016240:+4122 None:intergenic
GCACCCCTGTATGAAGGGGT+TGG 0.463326 tig0016240:+4535 None:intergenic
TAGGAATCTTGTCCAATTGG+TGG 0.464780 tig0016240:-3788 Msa1358370:CDS
GGTATGGCACAATGAATTAT+GGG 0.469170 tig0016240:-2146 Msa1358370:CDS
GCCAATATTTCTTGCATTGG+TGG 0.470072 tig0016240:-4160 Msa1358370:CDS
CCTTAATGTCCGGTTGAAGA+TGG 0.472965 tig0016240:+3680 None:intergenic
CCAATATTTCTTGCATTGGT+GGG 0.474835 tig0016240:-4159 Msa1358370:CDS
GGCACAATGAATTATGGGTT+CGG 0.475894 tig0016240:-2141 Msa1358370:CDS
TCAAAGCTCACAAGATGATT+GGG 0.477028 tig0016240:-2551 Msa1358370:CDS
AGCATTCAGACTGCGCTTAG+TGG 0.477709 tig0016240:+2458 None:intergenic
GTGTTTGCACCCCTGTATGA+AGG 0.489842 tig0016240:+4529 None:intergenic
GACTATTGATATTCAACAAA+GGG 0.490288 tig0016240:-4062 Msa1358370:CDS
GAAATTGCAAGTAGATTGCC+TGG 0.497474 tig0016240:-2516 Msa1358370:CDS
ACCCATCTTTGTTAGTGCCT+AGG 0.499541 tig0016240:-4189 Msa1358370:CDS
ACTAGGACCAGGGTTGGTAT+TGG 0.499880 tig0016240:+2287 None:intergenic
GGGAGTTCAATACAAGCAAA+AGG 0.501730 tig0016240:-4042 Msa1358370:CDS
AATTATGGGTTCGGATCGTA+TGG 0.505058 tig0016240:-2132 Msa1358370:CDS
AGCCTAGGCACTAACAAAGA+TGG 0.508071 tig0016240:+4187 None:intergenic
TCATCATAAACTACTGATGT+TGG 0.510801 tig0016240:+4214 None:intergenic
AAGTTTATGAATGGAAGAAT+CGG 0.512043 tig0016240:-3730 Msa1358370:CDS
ATGGTACAACCATCTTCAAC+CGG 0.516159 tig0016240:-3689 Msa1358370:CDS
TCAATACAAGCAAAAGGCTA+TGG 0.519597 tig0016240:-4036 Msa1358370:CDS
ATGATGCTCAACGGTGATGA+AGG 0.524326 tig0016240:-2180 Msa1358370:CDS
CTATGCGGAGAATGTTCAAA+AGG 0.526742 tig0016240:-2367 Msa1358370:CDS
GAAGAATCGGAAAACAGTGC+AGG 0.532629 tig0016240:-3717 Msa1358370:CDS
ACTACTGATGTTGGTAGAGA+AGG 0.534133 tig0016240:+4223 None:intergenic
TGTTTGCACCCCTGTATGAA+GGG 0.539400 tig0016240:+4530 None:intergenic
GATCCCAACCCCTTCATACA+GGG 0.545377 tig0016240:-4539 Msa1358370:CDS
GAAGGAATGACCAGTGGGTA+TGG 0.546294 tig0016240:-2162 Msa1358370:CDS
GCCTAGGCACTAACAAAGAT+GGG 0.548332 tig0016240:+4188 None:intergenic
AATACCCAACACAATGATGA+AGG 0.550572 tig0016240:-4127 Msa1358370:CDS
AGAACTCCATCAAGAACCGC+TGG 0.553376 tig0016240:-2485 Msa1358370:CDS
CAATGAACATCCTCTGAACA+TGG 0.553570 tig0016240:-4620 Msa1358370:CDS
CAGTAGAAACCCTAAAGTCT+TGG 0.559115 tig0016240:+4593 None:intergenic
AACGTTACCAATACCAACCC+TGG 0.560467 tig0016240:-2294 Msa1358370:CDS
ATTCATTGTGCCATACCCAC+TGG 0.563453 tig0016240:+2152 None:intergenic
GCTGCTCCTGTGGAAGAAGA+TGG 0.564317 tig0016240:-2216 Msa1358370:CDS
ACAAGATGATTGGGAACAAG+TGG 0.567686 tig0016240:-2542 Msa1358370:CDS
TAGCCACCATCTTCTTCCAC+AGG 0.568426 tig0016240:+2210 None:intergenic
AAAATTTGGGCTCAATAACT+GGG 0.569139 tig0016240:-3764 Msa1358370:CDS
GAAAACAGTGCAGGGAGAGA+TGG 0.569754 tig0016240:-3708 Msa1358370:CDS
CAACAAAATCTCTTTCAACA+TGG 0.572197 tig0016240:-4385 Msa1358370:CDS
TATGGACTTCAGATGAGGAT+AGG 0.575612 tig0016240:-4018 Msa1358370:intron
ATGGAGTTCTCAGTGCGCCC+AGG 0.578882 tig0016240:+2498 None:intergenic
TGAAGGTTTCGCTGCTCCTG+TGG 0.580714 tig0016240:-2226 Msa1358370:CDS
TGTGATTGTAGAAGGATACA+TGG 0.582147 tig0016240:-2599 Msa1358370:intron
TGCGCTTAGTGGAGTTCCAG+CGG 0.585896 tig0016240:+2469 None:intergenic
TGGGTTCGGATCGTATGGAA+TGG 0.589906 tig0016240:-2127 Msa1358370:CDS
AACTACTGATGTTGATAGAG+AGG 0.592028 tig0016240:+4336 None:intergenic
AACCCTGGTCCTAGTCATGT+TGG 0.596471 tig0016240:-2279 Msa1358370:CDS
AACATGACTAGGACCAGGGT+TGG 0.597563 tig0016240:+2281 None:intergenic
ACTTCATAACCAACATGACT+AGG 0.602220 tig0016240:+2270 None:intergenic
GAACGCCTTAATACTGACAA+AGG 0.605609 tig0016240:-4310 Msa1358370:CDS
AGACTATTGATATTCAACAA+AGG 0.610503 tig0016240:-4063 Msa1358370:CDS
TAACCAACATGACTAGGACC+AGG 0.610691 tig0016240:+2276 None:intergenic
AACCGCCGAAATAGTTTGAG+AGG 0.614124 tig0016240:-2423 Msa1358370:CDS
TCTTGGTTAGCCATGTTCAG+AGG 0.617854 tig0016240:+4610 None:intergenic
TTCCTCTCAAACTATTTCGG+CGG 0.620812 tig0016240:+2421 None:intergenic
ACTACTGATGTTGATAGAGA+GGG 0.621646 tig0016240:+4337 None:intergenic
AACCAACATGACTAGGACCA+GGG 0.623604 tig0016240:+2277 None:intergenic
GAAAATTCGTTGATATACGA+AGG 0.624664 tig0016240:+4565 None:intergenic
GGTTATGAAGTTGCAAACAA+TGG 0.625006 tig0016240:-2258 Msa1358370:CDS
AAAATCAGAGATCCCCGCAA+TGG 0.625636 tig0016240:-4722 Msa1358370:CDS
GCAGTCTGAATGCTACAAGT+AGG 0.628497 tig0016240:-2449 Msa1358370:CDS
AAGAATCGGAAAACAGTGCA+GGG 0.631304 tig0016240:-3716 Msa1358370:CDS
AAATTGCAAGTAGATTGCCT+GGG 0.636725 tig0016240:-2515 Msa1358370:CDS
GTAGGTGAAATAGTAGAACT+TGG 0.636823 tig0016240:+4688 None:intergenic
TGGTTGCAAGAGAACCATTG+CGG 0.637065 tig0016240:+4708 None:intergenic
CAAGATGATTGGGAACAAGT+GGG 0.643131 tig0016240:-2541 Msa1358370:CDS
GAAGGATACATGGAGCGAAG+AGG 0.648775 tig0016240:-2589 Msa1358370:CDS
GTTTGCACCCCTGTATGAAG+GGG 0.650629 tig0016240:+4531 None:intergenic
AAGGCTATGGACTTCAGATG+AGG 0.659211 tig0016240:-4023 Msa1358370:CDS
ATCCCAACCCCTTCATACAG+GGG 0.667776 tig0016240:-4538 Msa1358370:CDS
TTCTATAGATTATCTCCATG+AGG 0.671451 tig0016240:+2084 None:intergenic
GTGATGAAGGAATGACCAGT+GGG 0.678371 tig0016240:-2167 Msa1358370:CDS
CTGGTGTAATGTGATGGTGT+AGG 0.684642 tig0016240:+4670 None:intergenic
GTTGCAAGAGAACCATTGCG+GGG 0.691957 tig0016240:+4710 None:intergenic
GCTCCTGTGGAAGAAGATGG+TGG 0.696486 tig0016240:-2213 Msa1358370:CDS
GGTGATGAAGGAATGACCAG+TGG 0.697218 tig0016240:-2168 Msa1358370:CDS
TATGCAGCAATGATGCTCAA+CGG 0.720991 tig0016240:-2189 Msa1358370:CDS
CATTAGCGAAATCACCTATG+CGG 0.726829 tig0016240:-2382 Msa1358370:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTAAGAAAAGTAAAATA+TGG + tig0016240:3730-3749 None:intergenic 10.0%
!! AATTAACTAAAATAAGAAAT+TGG + tig0016240:3864-3883 None:intergenic 10.0%
!!! AATTCATTTTTGTTATTGTT+TGG + tig0016240:2428-2447 None:intergenic 15.0%
!! GTTTAATTATCACATTATAT+TGG - tig0016240:3467-3486 Msa1358370:intron 15.0%
!!! CTATTTTTCTGAATAAATAT+TGG - tig0016240:3534-3553 Msa1358370:intron 15.0%
!! AAATTTATAAACAATGTTCT+AGG - tig0016240:3560-3579 Msa1358370:intron 15.0%
!!! GAAATTTTTTCTGAAAAACT+AGG + tig0016240:2101-2120 None:intergenic 20.0%
!!! ATATTGAAAGAGATTTTGTT+GGG + tig0016240:2609-2628 None:intergenic 20.0%
!! AACTAAAACCATGAAAATAT+TGG + tig0016240:2925-2944 None:intergenic 20.0%
!!! ATATTTTCATGGTTTTAGTT+TGG - tig0016240:2925-2944 Msa1358370:intron 20.0%
!!! ATTAGTTCAAGTTATGTTTA+AGG - tig0016240:2964-2983 Msa1358370:intron 20.0%
!!! TTAGTTCAAGTTATGTTTAA+GGG - tig0016240:2965-2984 Msa1358370:intron 20.0%
!!! TGATAATTAATTGCTTTGAA+TGG + tig0016240:3362-3381 None:intergenic 20.0%
!! ACATAATATTGAGATAAGTT+TGG - tig0016240:3818-3837 Msa1358370:intron 20.0%
!! ACTAAAATAAGAAATTGGTA+AGG + tig0016240:3859-3878 None:intergenic 20.0%
!!! ATTCATTACCATTTTTGAAA+TGG - tig0016240:4197-4216 Msa1358370:CDS 20.0%
!!! TTCATTACCATTTTTGAAAT+GGG - tig0016240:4198-4217 Msa1358370:CDS 20.0%
! GAAAAAATTTCTTATCTCTC+AGG - tig0016240:2110-2129 Msa1358370:CDS 25.0%
!! GATTTTTCTTGAGGAATTTT+AGG + tig0016240:2143-2162 None:intergenic 25.0%
!!! TTTGTTATTGTTTGGTGTAA+AGG + tig0016240:2420-2439 None:intergenic 25.0%
! AAATTTCTTTGCCAGTATTA+AGG + tig0016240:2463-2482 None:intergenic 25.0%
! TTAATACTGGCAAAGAAATT+TGG - tig0016240:2462-2481 Msa1358370:CDS 25.0%
! TAATACTGGCAAAGAAATTT+GGG - tig0016240:2463-2482 Msa1358370:CDS 25.0%
!! ATGTTGAAAGAGATTTTGTT+GGG + tig0016240:2495-2514 None:intergenic 25.0%
! AAATTCCTTTGTCAGTATTA+AGG + tig0016240:2577-2596 None:intergenic 25.0%
!! TAATACTGACAAAGGAATTT+TGG - tig0016240:2577-2596 Msa1358370:CDS 25.0%
!! CATATTGAAAGAGATTTTGT+TGG + tig0016240:2610-2629 None:intergenic 25.0%
! CAACAAAATCTCTTTCAATA+TGG - tig0016240:2608-2627 Msa1358370:intron 25.0%
! AGACTATTGATATTCAACAA+AGG - tig0016240:2816-2835 Msa1358370:intron 25.0%
! GACTATTGATATTCAACAAA+GGG - tig0016240:2817-2836 Msa1358370:intron 25.0%
! AAGTTTATGAATGGAAGAAT+CGG - tig0016240:3149-3168 Msa1358370:intron 25.0%
!!! TGTCGTTTGCATTTTTAAAA+TGG + tig0016240:3669-3688 None:intergenic 25.0%
!! GAATAAAGCATTCATACATA+TGG + tig0016240:3765-3784 None:intergenic 25.0%
! TTTGAACAAATAGATACTTC+AGG - tig0016240:3883-3902 Msa1358370:intron 25.0%
! ATTAAAACAACCTACATGAA+AGG + tig0016240:3934-3953 None:intergenic 25.0%
! TTGTTTGGTAAGAATTAGTT+TGG + tig0016240:4025-4044 None:intergenic 25.0%
!!! ATAAAAGAGCATAGTTTGTT+TGG + tig0016240:4040-4059 None:intergenic 25.0%
!! CAAAAATGGTAATGAATGAA+TGG + tig0016240:4194-4213 None:intergenic 25.0%
!!! TCATTACCATTTTTGAAATG+GGG - tig0016240:4199-4218 Msa1358370:CDS 25.0%
AAAAAACTGGTGTAATGTGA+TGG + tig0016240:2218-2237 None:intergenic 30.0%
GAAAATTCGTTGATATACGA+AGG + tig0016240:2317-2336 None:intergenic 30.0%
! CATGTTGAAAGAGATTTTGT+TGG + tig0016240:2496-2515 None:intergenic 30.0%
CAACAAAATCTCTTTCAACA+TGG - tig0016240:2494-2513 Msa1358370:CDS 30.0%
TCATCATAAACTACTGATGT+TGG + tig0016240:2668-2687 None:intergenic 30.0%
! TCTGCTATCCAATATTTTCA+TGG - tig0016240:2914-2933 Msa1358370:intron 30.0%
TCCAATTGGTGGAAAAATTT+GGG - tig0016240:3102-3121 Msa1358370:intron 30.0%
AAAAATTTGGGCTCAATAAC+TGG - tig0016240:3114-3133 Msa1358370:intron 30.0%
AAAATTTGGGCTCAATAACT+GGG - tig0016240:3115-3134 Msa1358370:intron 30.0%
GAGATTGCTAAGTTTATGAA+TGG - tig0016240:3140-3159 Msa1358370:intron 30.0%
GTAAGGGATAAAAGCTAAAA+AGG + tig0016240:3251-3270 None:intergenic 30.0%
CATTCTAAGTGTATGTGTAA+GGG + tig0016240:3267-3286 None:intergenic 30.0%
GTACATATAGATGCATCAAA+TGG - tig0016240:3311-3330 Msa1358370:intron 30.0%
!!! CGTTTGCATTTTTAAAATGG+TGG + tig0016240:3666-3685 None:intergenic 30.0%
! TTACACTTTTCCTTTCATGT+AGG - tig0016240:3921-3940 Msa1358370:intron 30.0%
CACAACAAACAATATATGTG+TGG + tig0016240:4264-4283 None:intergenic 30.0%
!! TTGTTTGTTGTGATTGTAGA+AGG - tig0016240:4272-4291 Msa1358370:CDS 30.0%
ATGTTCCTCTCAAACTATTT+CGG + tig0016240:4464-4483 None:intergenic 30.0%
GTAGGTGAAATAGTAGAACT+TGG + tig0016240:2194-2213 None:intergenic 35.0%
GCTTTGATTGTGCAAAAAAC+TGG + tig0016240:2231-2250 None:intergenic 35.0%
GTGTAAAGGTTACTGGAATT+TGG + tig0016240:2406-2425 None:intergenic 35.0%
!! TTGTTTGGTGTAAAGGTTAC+TGG + tig0016240:2413-2432 None:intergenic 35.0%
ATGCATGAACACCTTAATAC+TGG - tig0016240:2449-2468 Msa1358370:CDS 35.0%
! ACTACTGATGTTGATAGAGA+GGG + tig0016240:2545-2564 None:intergenic 35.0%
! AACTACTGATGTTGATAGAG+AGG + tig0016240:2546-2565 None:intergenic 35.0%
CAAGCCAATATTTCTTGCAT+TGG - tig0016240:2716-2735 Msa1358370:intron 35.0%
! CCAATATTTCTTGCATTGGT+GGG - tig0016240:2720-2739 Msa1358370:intron 35.0%
AATACCCAACACAATGATGA+AGG - tig0016240:2752-2771 Msa1358370:intron 35.0%
TCAATACAAGCAAAAGGCTA+TGG - tig0016240:2843-2862 Msa1358370:intron 35.0%
TTGTAGGAATCTTGTCCAAT+TGG - tig0016240:3088-3107 Msa1358370:intron 35.0%
GTCCAATTGGTGGAAAAATT+TGG - tig0016240:3101-3120 Msa1358370:intron 35.0%
!! AAAAAAGGCACCTTAATGTC+CGG + tig0016240:3212-3231 None:intergenic 35.0%
GCATTCTAAGTGTATGTGTA+AGG + tig0016240:3268-3287 None:intergenic 35.0%
GAAGATCCCCATTTCAAAAA+TGG + tig0016240:4208-4227 None:intergenic 35.0%
TGTGATTGTAGAAGGATACA+TGG - tig0016240:4280-4299 Msa1358370:CDS 35.0%
ATCAAAGCTCACAAGATGAT+TGG - tig0016240:4327-4346 Msa1358370:CDS 35.0%
TCAAAGCTCACAAGATGATT+GGG - tig0016240:4328-4347 Msa1358370:CDS 35.0%
AAATTGCAAGTAGATTGCCT+GGG - tig0016240:4364-4383 Msa1358370:CDS 35.0%
ACTTCATAACCAACATGACT+AGG + tig0016240:4612-4631 None:intergenic 35.0%
GGTTATGAAGTTGCAAACAA+TGG - tig0016240:4621-4640 Msa1358370:CDS 35.0%
!!! AACAATGGTTTTAGCTCTGA+AGG - tig0016240:4636-4655 Msa1358370:CDS 35.0%
GGTATGGCACAATGAATTAT+GGG - tig0016240:4733-4752 Msa1358370:CDS 35.0%
! TTTCCTGAGTTTTTACCTCA+TGG - tig0016240:4780-4799 Msa1358370:CDS 35.0%
! GGGATCTCTGATTTTTCTTG+AGG + tig0016240:2152-2171 None:intergenic 40.0%
CAATGAACATCCTCTGAACA+TGG - tig0016240:2259-2278 Msa1358370:CDS 40.0%
ACATGGCTAACCAAGACTTT+AGG - tig0016240:2276-2295 Msa1358370:CDS 40.0%
CATGGCTAACCAAGACTTTA+GGG - tig0016240:2277-2296 Msa1358370:CDS 40.0%
CAGTAGAAACCCTAAAGTCT+TGG + tig0016240:2289-2308 None:intergenic 40.0%
!! AAAATCGCTCTGGGATCTAT+TGG + tig0016240:2375-2394 None:intergenic 40.0%
GTCGTTCAAAAAATCGCTCT+GGG + tig0016240:2384-2403 None:intergenic 40.0%
GAACGCCTTAATACTGACAA+AGG - tig0016240:2569-2588 Msa1358370:CDS 40.0%
TGGTGAAACTTCACAATCTC+AGG - tig0016240:2628-2647 Msa1358370:intron 40.0%
! ACTACTGATGTTGGTAGAGA+AGG + tig0016240:2659-2678 None:intergenic 40.0%
!! GAAATATTGGCTTGAAGCCT+AGG + tig0016240:2710-2729 None:intergenic 40.0%
GCCAATATTTCTTGCATTGG+TGG - tig0016240:2719-2738 Msa1358370:intron 40.0%
CCCACCAATGCAAGAAATAT+TGG + tig0016240:2723-2742 None:intergenic 40.0%
GAGTCCTTCATCATTGTGTT+GGG + tig0016240:2759-2778 None:intergenic 40.0%
TGAGTCCTTCATCATTGTGT+TGG + tig0016240:2760-2779 None:intergenic 40.0%
!! TTTTGACGCTTTTGGCTGTT+GGG + tig0016240:2785-2804 None:intergenic 40.0%
!! TTTTTGACGCTTTTGGCTGT+TGG + tig0016240:2786-2805 None:intergenic 40.0%
!! ACAGCCAAAAGCGTCAAAAA+AGG - tig0016240:2786-2805 Msa1358370:intron 40.0%
!! CAGCCAAAAGCGTCAAAAAA+GGG - tig0016240:2787-2806 Msa1358370:intron 40.0%
GGGAGTTCAATACAAGCAAA+AGG - tig0016240:2837-2856 Msa1358370:intron 40.0%
TATGGACTTCAGATGAGGAT+AGG - tig0016240:2861-2880 Msa1358370:intron 40.0%
TAGGAATCTTGTCCAATTGG+TGG - tig0016240:3091-3110 Msa1358370:intron 40.0%
! GCCCAAATTTTTCCACCAAT+TGG + tig0016240:3106-3125 None:intergenic 40.0%
AAGAATCGGAAAACAGTGCA+GGG - tig0016240:3163-3182 Msa1358370:intron 40.0%
ATGGTACAACCATCTTCAAC+CGG - tig0016240:3190-3209 Msa1358370:intron 40.0%
ACAAGATGATTGGGAACAAG+TGG - tig0016240:4337-4356 Msa1358370:CDS 40.0%
CAAGATGATTGGGAACAAGT+GGG - tig0016240:4338-4357 Msa1358370:CDS 40.0%
GAAATTGCAAGTAGATTGCC+TGG - tig0016240:4363-4382 Msa1358370:CDS 40.0%
TTCCTCTCAAACTATTTCGG+CGG + tig0016240:4461-4480 None:intergenic 40.0%
CATTAGCGAAATCACCTATG+CGG - tig0016240:4497-4516 Msa1358370:CDS 40.0%
! CTTTTGAACATTCTCCGCAT+AGG + tig0016240:4514-4533 None:intergenic 40.0%
CTATGCGGAGAATGTTCAAA+AGG - tig0016240:4512-4531 Msa1358370:CDS 40.0%
TATGCAGCAATGATGCTCAA+CGG - tig0016240:4690-4709 Msa1358370:CDS 40.0%
GGGTATGGCACAATGAATTA+TGG - tig0016240:4732-4751 Msa1358370:CDS 40.0%
GGCACAATGAATTATGGGTT+CGG - tig0016240:4738-4757 Msa1358370:CDS 40.0%
AATTATGGGTTCGGATCGTA+TGG - tig0016240:4747-4766 Msa1358370:CDS 40.0%
TCTCCATGAGGTAAAAACTC+AGG + tig0016240:4786-4805 None:intergenic 40.0%
AAAATCAGAGATCCCCGCAA+TGG - tig0016240:2157-2176 Msa1358370:CDS 45.0%
TGGTTGCAAGAGAACCATTG+CGG + tig0016240:2174-2193 None:intergenic 45.0%
! CTGGTGTAATGTGATGGTGT+AGG + tig0016240:2212-2231 None:intergenic 45.0%
! TCTTGGTTAGCCATGTTCAG+AGG + tig0016240:2272-2291 None:intergenic 45.0%
TGTTTGCACCCCTGTATGAA+GGG + tig0016240:2352-2371 None:intergenic 45.0%
GGTCGTTCAAAAAATCGCTC+TGG + tig0016240:2385-2404 None:intergenic 45.0%
ACCCATCTTTGTTAGTGCCT+AGG - tig0016240:2690-2709 Msa1358370:intron 45.0%
GCCTAGGCACTAACAAAGAT+GGG + tig0016240:2694-2713 None:intergenic 45.0%
AGCCTAGGCACTAACAAAGA+TGG + tig0016240:2695-2714 None:intergenic 45.0%
!! TTTGACGCTTTTGGCTGTTG+GGG + tig0016240:2784-2803 None:intergenic 45.0%
!!! CAGCCCTTTTTTGACGCTTT+TGG + tig0016240:2793-2812 None:intergenic 45.0%
AAGGCTATGGACTTCAGATG+AGG - tig0016240:2856-2875 Msa1358370:intron 45.0%
GAAGAATCGGAAAACAGTGC+AGG - tig0016240:3162-3181 Msa1358370:intron 45.0%
CCTTAATGTCCGGTTGAAGA+TGG + tig0016240:3202-3221 None:intergenic 45.0%
CCATCTTCAACCGGACATTA+AGG - tig0016240:3199-3218 Msa1358370:intron 45.0%
GCAGTCTGAATGCTACAAGT+AGG - tig0016240:4430-4449 Msa1358370:CDS 45.0%
CTCAAACTATTTCGGCGGTT+TGG + tig0016240:4456-4475 None:intergenic 45.0%
AACCGCCGAAATAGTTTGAG+AGG - tig0016240:4456-4475 Msa1358370:CDS 45.0%
CGCAATCTGCACTATGTTCA+TGG + tig0016240:4550-4569 None:intergenic 45.0%
AACGTTACCAATACCAACCC+TGG - tig0016240:4585-4604 Msa1358370:CDS 45.0%
AACCAACATGACTAGGACCA+GGG + tig0016240:4605-4624 None:intergenic 45.0%
TAACCAACATGACTAGGACC+AGG + tig0016240:4606-4625 None:intergenic 45.0%
ATGATGCTCAACGGTGATGA+AGG - tig0016240:4699-4718 Msa1358370:CDS 45.0%
GTGATGAAGGAATGACCAGT+GGG - tig0016240:4712-4731 Msa1358370:CDS 45.0%
ATTCATTGTGCCATACCCAC+TGG + tig0016240:4730-4749 None:intergenic 45.0%
!!! TAAAATTTTATATTTTTTGT+AGG - tig0016240:3072-3091 Msa1358370:intron 5.0%
!!! TTTTTTTTTTCTTTTAAAAA+AGG + tig0016240:3227-3246 None:intergenic 5.0%
GTTGCAAGAGAACCATTGCG+GGG + tig0016240:2172-2191 None:intergenic 50.0%
GGTTGCAAGAGAACCATTGC+GGG + tig0016240:2173-2192 None:intergenic 50.0%
TGATCCCAACCCCTTCATAC+AGG - tig0016240:2339-2358 Msa1358370:CDS 50.0%
GATCCCAACCCCTTCATACA+GGG - tig0016240:2340-2359 Msa1358370:CDS 50.0%
ATCCCAACCCCTTCATACAG+GGG - tig0016240:2341-2360 Msa1358370:CDS 50.0%
GTTTGCACCCCTGTATGAAG+GGG + tig0016240:2351-2370 None:intergenic 50.0%
GTGTTTGCACCCCTGTATGA+AGG + tig0016240:2353-2372 None:intergenic 50.0%
GAAAACAGTGCAGGGAGAGA+TGG - tig0016240:3171-3190 Msa1358370:intron 50.0%
GAAGGATACATGGAGCGAAG+AGG - tig0016240:4290-4309 Msa1358370:CDS 50.0%
AGAACTCCATCAAGAACCGC+TGG - tig0016240:4394-4413 Msa1358370:CDS 50.0%
AGCATTCAGACTGCGCTTAG+TGG + tig0016240:4424-4443 None:intergenic 50.0%
!! ACTAGGACCAGGGTTGGTAT+TGG + tig0016240:4595-4614 None:intergenic 50.0%
AACATGACTAGGACCAGGGT+TGG + tig0016240:4601-4620 None:intergenic 50.0%
AACCCTGGTCCTAGTCATGT+TGG - tig0016240:4600-4619 Msa1358370:CDS 50.0%
TAGCCACCATCTTCTTCCAC+AGG + tig0016240:4672-4691 None:intergenic 50.0%
GGTGATGAAGGAATGACCAG+TGG - tig0016240:4711-4730 Msa1358370:CDS 50.0%
GAAGGAATGACCAGTGGGTA+TGG - tig0016240:4717-4736 Msa1358370:CDS 50.0%
TGGGTTCGGATCGTATGGAA+TGG - tig0016240:4752-4771 Msa1358370:CDS 50.0%
CACCCCTGTATGAAGGGGTT+GGG + tig0016240:2346-2365 None:intergenic 55.0%
GGAGTTCCAGCGGTTCTTGA+TGG + tig0016240:4403-4422 None:intergenic 55.0%
TGCGCTTAGTGGAGTTCCAG+CGG + tig0016240:4413-4432 None:intergenic 55.0%
TGAAGGTTTCGCTGCTCCTG+TGG - tig0016240:4653-4672 Msa1358370:CDS 55.0%
GCTGCTCCTGTGGAAGAAGA+TGG - tig0016240:4663-4682 Msa1358370:CDS 55.0%
GCTCCTGTGGAAGAAGATGG+TGG - tig0016240:4666-4685 Msa1358370:CDS 55.0%
GCACCCCTGTATGAAGGGGT+TGG + tig0016240:2347-2366 None:intergenic 60.0%
ATGGAGTTCTCAGTGCGCCC+AGG + tig0016240:4384-4403 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0016240 gene 2086 4815 2086 ID=Msa1358370;Name=Msa1358370
tig0016240 mRNA 2086 4815 2086 ID=Msa1358370-mRNA-1;Parent=Msa1358370;Name=Msa1358370-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|3|0|482
tig0016240 exon 4019 4815 4019 ID=Msa1358370-mRNA-1:exon:10856;Parent=Msa1358370-mRNA-1
tig0016240 exon 3681 3807 3681 ID=Msa1358370-mRNA-1:exon:10855;Parent=Msa1358370-mRNA-1
tig0016240 exon 2086 2610 2086 ID=Msa1358370-mRNA-1:exon:10854;Parent=Msa1358370-mRNA-1
tig0016240 CDS 4019 4815 4019 ID=Msa1358370-mRNA-1:cds;Parent=Msa1358370-mRNA-1
tig0016240 CDS 3681 3807 3681 ID=Msa1358370-mRNA-1:cds;Parent=Msa1358370-mRNA-1
tig0016240 CDS 2086 2610 2086 ID=Msa1358370-mRNA-1:cds;Parent=Msa1358370-mRNA-1
Gene Sequence

>Msa1358370

ATGGAATTAGATCCTAGTTTTTCAGAAAAAATTTCTTATCTCTCAGGAGATTTTCCTAAAATTCCTCAAGAAAAATCAGAGATCCCCGCAATGGTTCTCTTGCAACCAAGTTCTACTATTTCACCTACACCATCACATTACACCAGTTTTTTGCACAATCAAAGCAGTCAATTCAATGAACATCCTCTGAACATGGCTAACCAAGACTTTAGGGTTTCTACTGTAGTTCCTTCGTATATCAACGAATTTTCTATGATCCCAACCCCTTCATACAGGGGTGCAAACACCAATAGATCCCAGAGCGATTTTTTGAACGACCAAATTCCAGTAACCTTTACACCAAACAATAACAAAAATGAATTTATGCATGAACACCTTAATACTGGCAAAGAAATTTGGGATTTTTCCCAACAAAATCTCTTTCAACATGGTCAAACTTCACAATCTCATTTCAGTCCCTCTCTATCAACATCAGTAGTTTATGAACGCCTTAATACTGACAAAGGAATTTTGGATTTCTCCCAACAAAATCTCTTTCAATATGGTGAAACTTCACAATCTCAGGTCAGTCCTTCTCTACCAACATCAGTAGTTTATGATGAAAACCCATCTTTGTTAGTGCCTAGGCTTCAAGCCAATATTTCTTGCATTGGTGGGTTTGAAAACAATACCCAACACAATGATGAAGGACTCATCCCCAACAGCCAAAAGCGTCAAAAAAGGGCTGATAAGACTATTGATATTCAACAAAGGGAGTTCAATACAAGCAAAAGGCTATGGACTTCAGATGAGGATAGGAATCTTGTCCAATTGGTGGAAAAATTTGGGCTCAATAACTGGGTAGAGATTGCTAAGTTTATGAATGGAAGAATCGGAAAACAGTGCAGGGAGAGATGGTACAACCATCTTCAACCGGACATTAAGAAGGATACATGGAGCGAAGAGGAAGACATATTATTGATCAAAGCTCACAAGATGATTGGGAACAAGTGGGCTGAAATTGCAAGTAGATTGCCTGGGCGCACTGAGAACTCCATCAAGAACCGCTGGAACTCCACTAAGCGCAGTCTGAATGCTACAAGTAGGCCAAACCGCCGAAATAGTTTGAGAGGAACATTACTTCATAATTACATTAGCGAAATCACCTATGCGGAGAATGTTCAAAAGGAGCTGACTAATTCCATGAACATAGTGCAGATTGCGAATCAGACAAATTTCAACGTTACCAATACCAACCCTGGTCCTAGTCATGTTGGTTATGAAGTTGCAAACAATGGTTTTAGCTCTGAAGGTTTCGCTGCTCCTGTGGAAGAAGATGGTGGCTATGCAGCAATGATGCTCAACGGTGATGAAGGAATGACCAGTGGGTATGGCACAATGAATTATGGGTTCGGATCGTATGGAATGGAGTTTTTTCCTGAGTTTTTACCTCATGGAGATAATCTATAG
Protein sequence

>Msa1358370

MELDPSFSEKISYLSGDFPKIPQEKSEIPAMVLLQPSSTISPTPSHYTSFLHNQSSQFNEHPLNMANQDFRVSTVVPSYINEFSMIPTPSYRGANTNRSQSDFLNDQIPVTFTPNNNKNEFMHEHLNTGKEIWDFSQQNLFQHGQTSQSHFSPSLSTSVVYERLNTDKGILDFSQQNLFQYGETSQSQVSPSLPTSVVYDENPSLLVPRLQANISCIGGFENNTQHNDEGLIPNSQKRQKRADKTIDIQQREFNTSKRLWTSDEDRNLVQLVEKFGLNNWVEIAKFMNGRIGKQCRERWYNHLQPDIKKDTWSEEEDILLIKAHKMIGNKWAEIASRLPGRTENSIKNRWNSTKRSLNATSRPNRRNSLRGTLLHNYISEITYAENVQKELTNSMNIVQIANQTNFNVTNTNPGPSHVGYEVANNGFSSEGFAAPVEEDGGYAAMMLNGDEGMTSGYGTMNYGFGSYGMEFFPEFLPHGDNL*