AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1358920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1358920 MtrunA17_Chr5g0441141 70.661 242 50 7 12 251 13 235 9.57e-110 322
Msa1358920 MtrunA17_Chr5g0440761 71.610 236 50 6 12 247 13 231 5.83e-109 319
Msa1358920 MtrunA17_Chr5g0440781 80.110 181 28 2 12 192 13 185 4.47e-101 296
Msa1358920 MtrunA17_Chr5g0441131 64.706 187 46 3 2 188 4 170 1.43e-76 234
Msa1358920 MtrunA17_Chr4g0072451 60.759 158 16 3 1 158 1 112 4.88e-51 166
Msa1358920 MtrunA17_Chr5g0425591 82.979 94 12 1 2 95 4 93 7.22e-51 165
Msa1358920 MtrunA17_Chr1g0154031 43.787 169 91 3 11 177 76 242 1.63e-39 145
Msa1358920 MtrunA17_Chr1g0192411 44.500 200 95 8 2 191 4 197 2.08e-39 144
Msa1358920 MtrunA17_Chr3g0080861 41.104 163 93 3 11 171 37 198 3.13e-39 146
Msa1358920 MtrunA17_Chr4g0048511 49.630 135 61 3 6 134 8 141 1.31e-38 141
Msa1358920 MtrunA17_Chr2g0281071 53.333 120 54 2 4 122 6 124 1.56e-38 140
Msa1358920 MtrunA17_Chr3g0099131 49.624 133 66 1 11 143 41 172 5.20e-38 142
Msa1358920 MtrunA17_Chr2g0322521 51.613 124 59 1 5 128 23 145 9.64e-38 139
Msa1358920 MtrunA17_Chr2g0323411 55.263 114 49 2 10 122 11 123 1.25e-37 137
Msa1358920 MtrunA17_Chr8g0354661 38.000 200 106 6 11 195 37 233 3.47e-37 140
Msa1358920 MtrunA17_Chr5g0410961 52.632 114 52 2 10 122 11 123 7.58e-37 136
Msa1358920 MtrunA17_Chr3g0103281 50.427 117 56 2 11 126 12 127 1.61e-36 134
Msa1358920 MtrunA17_Chr1g0187761 44.203 138 76 1 10 147 11 147 2.45e-36 132
Msa1358920 MtrunA17_Chr1g0203411 49.550 111 55 1 10 120 11 120 4.58e-36 132
Msa1358920 MtrunA17_Chr3g0115821 50.435 115 55 2 10 123 11 124 1.11e-35 133
Msa1358920 MtrunA17_Chr1g0151941 39.326 178 92 4 11 187 12 174 1.53e-35 130
Msa1358920 MtrunA17_Chr5g0395281 47.244 127 65 2 1 126 2 127 1.90e-35 131
Msa1358920 MtrunA17_Chr7g0270891 43.624 149 77 3 11 153 12 159 2.06e-35 132
Msa1358920 MtrunA17_Chr1g0167691 51.786 112 50 2 9 120 10 117 2.14e-35 130
Msa1358920 MtrunA17_Chr4g0039971 49.206 126 61 3 10 134 12 135 3.04e-35 132
Msa1358920 MtrunA17_Chr4g0032401 43.590 156 80 4 6 154 12 166 3.67e-35 131
Msa1358920 MtrunA17_Chr1g0167661 50.000 116 55 2 9 122 10 124 4.42e-35 129
Msa1358920 MtrunA17_Chr4g0037141 51.351 111 52 2 13 122 14 123 6.58e-35 129
Msa1358920 MtrunA17_Chr5g0400821 38.679 212 108 8 11 203 12 220 7.82e-35 130
Msa1358920 MtrunA17_Chr2g0328771 51.724 116 54 2 11 125 20 134 9.01e-35 130
Msa1358920 MtrunA17_Chr3g0131121 50.833 120 56 3 13 131 14 131 1.15e-34 129
Msa1358920 MtrunA17_Chr7g0274581 40.559 143 73 2 10 152 11 141 1.37e-34 126
Msa1358920 MtrunA17_Chr1g0193371 50.442 113 54 2 11 122 12 123 1.86e-34 130
Msa1358920 MtrunA17_Chr4g0042671 45.714 140 72 3 10 148 11 147 2.00e-34 130
Msa1358920 MtrunA17_Chr8g0385321 53.153 111 50 2 13 122 14 123 3.56e-34 128
Msa1358920 MtrunA17_Chr1g0193901 70.103 97 28 1 1 96 1 97 3.79e-34 122
Msa1358920 MtrunA17_Chr1g0193891 70.103 97 28 1 1 96 1 97 3.79e-34 122
Msa1358920 MtrunA17_Chr1g0193871 70.103 97 28 1 1 96 1 97 3.79e-34 122
Msa1358920 MtrunA17_Chr1g0193881 70.103 97 28 1 1 96 1 97 3.79e-34 122
Msa1358920 MtrunA17_Chr1g0193801 47.368 133 64 3 11 138 12 143 4.47e-34 129
Msa1358920 MtrunA17_Chr4g0022931 40.523 153 79 3 4 156 6 146 6.41e-34 126
Msa1358920 MtrunA17_Chr7g0217741 48.305 118 59 2 10 126 11 127 8.37e-34 127
Msa1358920 MtrunA17_Chr8g0349261 48.739 119 58 3 6 122 8 125 9.47e-34 126
Msa1358920 MtrunA17_Chr4g0022881 47.899 119 61 1 10 128 11 128 1.40e-33 124
Msa1358920 MtrunA17_Chr2g0309911 45.528 123 65 2 1 122 1 122 1.90e-33 126
Msa1358920 MtrunA17_Chr6g0453751 62.105 95 28 1 7 93 16 110 1.99e-33 120
Msa1358920 MtrunA17_Chr6g0453471 45.113 133 70 3 10 141 11 141 2.26e-33 127
Msa1358920 MtrunA17_Chr1g0211161 45.385 130 69 2 4 132 6 134 2.98e-33 123
Msa1358920 MtrunA17_Chr5g0417821 50.847 118 56 2 10 126 6 122 3.75e-33 125
Msa1358920 MtrunA17_Chr3g0088461 53.271 107 48 2 11 116 22 127 8.43e-33 125
Msa1358920 MtrunA17_Chr5g0435101 45.133 113 60 2 11 122 11 122 1.33e-32 121
Msa1358920 MtrunA17_Chr3g0117091 47.541 122 62 2 11 131 12 132 1.36e-32 124
Msa1358920 MtrunA17_Chr4g0058631 47.863 117 59 2 11 126 12 127 1.45e-32 125
Msa1358920 MtrunA17_Chr4g0022901 42.029 138 76 2 4 141 6 139 1.95e-32 122
Msa1358920 MtrunA17_Chr7g0228891 49.153 118 58 2 10 126 11 127 3.30e-32 122
Msa1358920 MtrunA17_Chr7g0271241 54.545 99 44 1 11 109 12 109 3.37e-32 124
Msa1358920 MtrunA17_Chr3g0110351 49.580 119 58 2 10 127 11 128 3.39e-32 122
Msa1358920 MtrunA17_Chr8g0342521 47.826 115 58 2 9 122 10 123 4.80e-32 123
Msa1358920 MtrunA17_Chr1g0152011 54.286 105 46 2 11 114 12 115 6.16e-32 122
Msa1358920 MtrunA17_Chr4g0044421 46.847 111 57 2 13 122 14 123 6.38e-32 119
Msa1358920 MtrunA17_Chr4g0068061 48.571 105 53 1 10 114 11 114 6.99e-32 122
Msa1358920 MtrunA17_Chr5g0434571 50.000 118 57 2 10 126 47 163 9.23e-32 122
Msa1358920 MtrunA17_Chr2g0323351 48.571 105 53 1 10 114 11 114 1.21e-31 119
Msa1358920 MtrunA17_Chr3g0121241 45.614 114 60 2 10 122 41 153 1.40e-31 121
Msa1358920 MtrunA17_Chr2g0327351 55.446 101 43 2 11 110 12 111 1.88e-31 121
Msa1358920 MtrunA17_Chr8g0342541 48.113 106 54 1 9 114 10 114 2.09e-31 121
Msa1358920 MtrunA17_Chr4g0022911 40.845 142 80 2 4 145 6 143 2.43e-31 120
Msa1358920 MtrunA17_Chr4g0028311 53.333 105 47 2 11 114 12 115 2.67e-31 120
Msa1358920 MtrunA17_Chr8g0346561 46.789 109 57 1 10 118 11 118 3.61e-31 120
Msa1358920 MtrunA17_Chr3g0135311 51.429 105 49 2 11 114 12 115 3.74e-31 120
Msa1358920 MtrunA17_Chr7g0261281 47.619 105 54 1 10 114 11 114 4.15e-31 119
Msa1358920 MtrunA17_Chr7g0264641 51.429 105 49 2 11 114 12 115 4.61e-31 119
Msa1358920 MtrunA17_Chr4g0022891 48.515 101 51 1 10 110 11 110 6.22e-31 117
Msa1358920 MtrunA17_Chr6g0452271 46.154 117 61 2 11 126 12 127 7.00e-31 120
Msa1358920 MtrunA17_Chr1g0209661 45.370 108 58 1 11 118 27 133 1.17e-30 119
Msa1358920 MtrunA17_Chr4g0054391 54.000 100 44 2 11 109 12 110 1.20e-30 118
Msa1358920 MtrunA17_Chr7g0217221 47.273 110 56 2 9 117 10 118 1.29e-30 117
Msa1358920 MtrunA17_Chr1g0194951 48.515 101 51 1 10 110 11 110 1.38e-30 119
Msa1358920 MtrunA17_Chr2g0330041 46.087 115 60 2 9 122 10 123 1.45e-30 120
Msa1358920 MtrunA17_Chr1g0194301 47.222 108 56 1 11 118 33 139 1.47e-30 117
Msa1358920 MtrunA17_Chr4g0060721 46.789 109 56 2 10 117 12 119 1.51e-30 119
Msa1358920 MtrunA17_Chr7g0275911 46.296 108 56 2 10 116 11 117 1.52e-30 117
Msa1358920 MtrunA17_Chr4g0055981 45.192 104 56 1 7 110 51 153 1.62e-30 116
Msa1358920 MtrunA17_Chr5g0397231 49.020 102 51 1 9 110 10 110 2.31e-30 118
Msa1358920 MtrunA17_Chr8g0387421 47.222 108 56 1 11 118 12 118 2.35e-30 118
Msa1358920 MtrunA17_Chr6g0453211 47.059 102 53 1 9 110 10 110 2.69e-30 118
Msa1358920 MtrunA17_Chr7g0228231 46.903 113 57 2 2 114 7 116 3.85e-30 114
Msa1358920 MtrunA17_Chr8g0343831 49.020 102 51 1 9 110 6 106 4.58e-30 115
Msa1358920 MtrunA17_Chr4g0070641 46.535 101 53 1 10 110 11 110 7.51e-30 112
Msa1358920 MtrunA17_Chr3g0092401 46.667 105 55 1 10 114 12 115 1.08e-29 116
Msa1358920 MtrunA17_Chr4g0057031 47.826 115 58 2 10 123 11 124 1.09e-29 115
Msa1358920 MtrunA17_Chr1g0180391 50.000 104 51 1 11 114 19 121 1.13e-29 114
Msa1358920 MtrunA17_Chr5g0434931 44.144 111 61 1 4 114 28 137 1.49e-29 115
Msa1358920 MtrunA17_Chr7g0254411 47.706 109 55 2 10 117 11 118 1.72e-29 116
Msa1358920 MtrunA17_Chr4g0072751 52.475 101 46 2 11 110 12 111 1.76e-29 116
Msa1358920 MtrunA17_Chr6g0450101 48.077 104 53 1 11 114 14 116 2.10e-29 112
Msa1358920 MtrunA17_Chr1g0186061 49.515 103 51 1 12 114 21 122 2.50e-29 114
Msa1358920 MtrunA17_Chr4g0070611 46.078 102 54 1 9 110 10 110 3.53e-29 114
Msa1358920 MtrunA17_Chr4g0013361 46.377 138 64 5 11 144 10 141 6.78e-29 113
Msa1358920 MtrunA17_Chr1g0194291 44.037 109 60 1 3 111 13 120 7.14e-29 112
Msa1358920 MtrunA17_Chr8g0342481 47.619 105 53 2 11 114 12 115 8.76e-29 115
Msa1358920 MtrunA17_Chr1g0203441 49.515 103 51 1 12 114 14 115 9.88e-29 112
Msa1358920 MtrunA17_Chr6g0470971 46.847 111 56 2 12 120 15 124 1.09e-28 112
Msa1358920 MtrunA17_Chr6g0487491 45.536 112 53 2 11 114 12 123 1.18e-28 112
Msa1358920 MtrunA17_Chr2g0311221 51.000 100 48 1 11 110 14 112 1.87e-28 113
Msa1358920 MtrunA17_Chr7g0269831 52.475 101 47 1 10 110 11 110 2.85e-28 113
Msa1358920 MtrunA17_Chr7g0228991 30.137 219 137 3 4 217 22 229 3.45e-28 111
Msa1358920 MtrunA17_Chr5g0434911 45.283 106 57 1 9 114 19 123 4.50e-28 110
Msa1358920 MtrunA17_Chr8g0360111 44.340 106 58 1 5 110 19 123 4.84e-28 110
Msa1358920 MtrunA17_Chr8g0334881 48.148 108 54 2 11 117 10 116 9.49e-28 111
Msa1358920 MtrunA17_Chr1g0168661 44.643 112 58 2 12 123 22 129 1.02e-27 109
Msa1358920 MtrunA17_Chr5g0434831 43.636 110 61 1 5 114 1 109 1.09e-27 107
Msa1358920 MtrunA17_Chr4g0072441 51.667 120 14 1 246 365 1 76 1.57e-27 103
Msa1358920 MtrunA17_Chr5g0434841 44.545 110 60 1 5 114 14 122 1.87e-27 110
Msa1358920 MtrunA17_Chr7g0220341 45.370 108 56 2 5 110 19 125 2.97e-27 108
Msa1358920 MtrunA17_Chr4g0068921 43.220 118 66 1 1 118 14 130 1.46e-26 104
Msa1358920 MtrunA17_Chr7g0240821 35.570 149 78 2 16 164 6 136 3.58e-26 104
Msa1358920 MtrunA17_Chr7g0247131 54.321 81 35 2 43 122 10 89 4.45e-26 105
Msa1358920 MtrunA17_Chr2g0293911 47.115 104 54 1 11 114 24 126 5.17e-26 106
Msa1358920 MtrunA17_Chr3g0099141 55.422 83 36 1 11 93 40 121 6.29e-26 101
Msa1358920 MtrunA17_Chr4g0008551 48.624 109 49 4 13 120 38 140 3.66e-25 104
Msa1358920 MtrunA17_Chr3g0117511 46.491 114 57 3 13 124 183 294 3.91e-25 105
Msa1358920 MtrunA17_Chr5g0401731 49.057 106 49 3 13 118 15 115 1.21e-24 102
Msa1358920 MtrunA17_Chr3g0133601 47.664 107 51 3 13 119 37 138 1.92e-24 99.8
Msa1358920 MtrunA17_Chr2g0327821 41.964 112 61 2 11 119 6 116 2.46e-24 99.8
Msa1358920 MtrunA17_Chr5g0395221 48.235 85 44 0 1 85 2 86 5.66e-24 94.4
Msa1358920 MtrunA17_Chr2g0323321 51.282 78 38 0 8 85 8 85 6.49e-24 95.1
Msa1358920 MtrunA17_Chr6g0454921 49.485 97 47 2 13 109 15 109 8.70e-24 97.8
Msa1358920 MtrunA17_Chr4g0058991 43.590 117 60 4 11 124 207 320 1.58e-23 101
Msa1358920 MtrunA17_Chr6g0460661 38.843 121 72 2 13 133 16 134 2.26e-23 95.1
Msa1358920 MtrunA17_Chr4g0053431 49.057 106 49 3 13 118 5 105 4.16e-23 97.4
Msa1358920 MtrunA17_Chr4g0030881 40.909 110 57 2 12 114 8 116 6.76e-23 96.7
Msa1358920 MtrunA17_Chr5g0429661 41.593 113 64 2 6 118 115 225 1.40e-22 97.4
Msa1358920 MtrunA17_Chr5g0397841 45.631 103 54 2 7 109 104 204 3.12e-22 97.8
Msa1358920 MtrunA17_Chr6g0480581 40.000 105 61 2 13 117 4 106 3.41e-22 94.0
Msa1358920 MtrunA17_Chr4g0042611 49.333 75 38 0 11 85 12 86 5.61e-22 89.0
Msa1358920 MtrunA17_Chr5g0437321 44.954 109 58 2 2 110 8 114 6.50e-22 94.4
Msa1358920 MtrunA17_Chr2g0294811 46.053 76 41 0 10 85 11 86 4.33e-21 87.8
Msa1358920 MtrunA17_Chr3g0125801 40.517 116 64 3 2 114 5 118 1.11e-20 90.9
Msa1358920 MtrunA17_Chr3g0139671 41.121 107 61 2 8 114 80 184 1.51e-20 93.6
Msa1358920 MtrunA17_Chr3g0139671 35.052 97 62 1 13 109 33 128 9.42e-14 72.8
Msa1358920 MtrunA17_Chr1g0157731 41.121 107 61 2 8 114 86 190 1.61e-20 93.6
Msa1358920 MtrunA17_Chr1g0157731 35.052 97 62 1 13 109 39 134 1.02e-13 72.8
Msa1358920 MtrunA17_Chr8g0342511 45.122 82 45 0 4 85 5 86 1.71e-20 85.5
Msa1358920 MtrunA17_Chr7g0228401 48.913 92 45 2 24 115 290 379 5.50e-20 91.3
Msa1358920 MtrunA17_Chr8g0342531 46.341 82 44 0 4 85 5 86 7.76e-20 85.5
Msa1358920 MtrunA17_Chr7g0238631 39.344 122 67 3 8 124 108 227 1.00e-19 90.5
Msa1358920 MtrunA17_Chr7g0238631 32.990 97 64 1 13 109 61 156 9.02e-12 66.2
Msa1358920 MtrunA17_Chr7g0228531 39.623 106 61 3 13 118 220 322 1.61e-19 89.4
Msa1358920 MtrunA17_Chr5g0417621 35.664 143 81 5 13 146 134 274 3.48e-19 88.6
Msa1358920 MtrunA17_Chr4g0042501 40.367 109 60 3 9 114 101 207 4.26e-19 88.2
Msa1358920 MtrunA17_Chr7g0238651 41.121 107 60 2 13 117 7 112 6.36e-19 87.0
Msa1358920 MtrunA17_Chr6g0460671 37.097 124 76 2 13 136 99 220 2.31e-18 85.1
Msa1358920 MtrunA17_Chr7g0228481 38.889 108 63 3 11 118 218 322 3.38e-18 85.5
Msa1358920 MtrunA17_Chr8g0342461 44.578 83 45 1 4 85 5 87 3.63e-18 80.1
Msa1358920 MtrunA17_Chr7g0254261 40.000 110 64 2 1 110 77 184 6.89e-18 84.0
Msa1358920 MtrunA17_Chr8g0342471 44.578 83 45 1 4 85 5 87 8.35e-18 79.3
Msa1358920 MtrunA17_Chr7g0229131 45.833 72 38 1 43 114 4 74 2.88e-16 75.9
Msa1358920 MtrunA17_Chr7g0229101 46.479 71 37 1 43 113 4 73 4.77e-16 76.3
Msa1358920 MtrunA17_Chr7g0233061 39.450 109 56 4 13 118 180 281 6.28e-16 78.2
Msa1358920 MtrunA17_Chr1g0177901 46.667 75 39 1 47 121 27 100 1.93e-15 74.3
Msa1358920 MtrunA17_Chr5g0434901 44.928 69 37 1 45 113 7 74 2.42e-15 71.6
Msa1358920 MtrunA17_Chr6g0453771 36.686 169 78 7 182 327 1 163 5.44e-15 72.8
Msa1358920 MtrunA17_Chr3g0093811 38.947 95 53 3 36 126 4 97 4.89e-14 71.6
Msa1358920 MtrunA17_Chr5g0416341 34.579 107 67 3 16 121 29 133 2.96e-13 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1358920 AT2G26960.1 47.500 160 71 4 9 158 18 174 2.38e-43 155
Msa1358920 AT2G32460.2 50.000 120 59 1 9 128 4 122 2.65e-39 145
Msa1358920 AT2G32460.1 50.000 120 59 1 9 128 16 134 3.00e-39 145
Msa1358920 AT4G21440.1 55.263 114 49 2 10 122 11 123 2.35e-38 140
Msa1358920 AT5G55020.1 53.509 114 52 1 11 124 26 138 2.70e-38 144
Msa1358920 AT4G26930.1 48.760 121 61 1 11 131 19 138 1.08e-37 139
Msa1358920 AT5G10280.1 37.900 219 107 6 3 198 4 216 1.81e-37 138
Msa1358920 AT5G06100.1 50.000 120 59 1 10 129 31 149 2.94e-37 140
Msa1358920 AT5G56110.1 51.282 117 55 2 11 126 12 127 3.81e-37 136
Msa1358920 AT3G11440.2 49.587 121 60 1 11 131 41 160 5.06e-37 139
Msa1358920 AT5G06100.5 50.000 120 59 1 10 129 31 149 6.11e-37 140
Msa1358920 AT5G06100.2 50.000 120 59 1 10 129 31 149 6.11e-37 140
Msa1358920 AT5G06100.3 50.000 120 59 1 10 129 31 149 6.11e-37 140
Msa1358920 AT5G06100.4 50.000 120 59 1 10 129 31 149 6.11e-37 140
Msa1358920 AT1G57560.1 37.557 221 115 7 11 221 12 219 8.59e-37 135
Msa1358920 AT2G26950.1 50.420 119 58 1 9 127 14 131 1.00e-36 137
Msa1358920 AT3G11440.3 49.587 121 60 1 11 131 41 160 1.23e-36 139
Msa1358920 AT3G11440.4 49.587 121 60 1 11 131 41 160 1.23e-36 139
Msa1358920 AT3G11440.1 49.587 121 60 1 11 131 41 160 1.23e-36 139
Msa1358920 AT5G26660.1 50.000 124 60 2 11 133 12 134 1.37e-36 136
Msa1358920 AT3G61250.1 50.877 114 54 2 10 122 11 123 4.08e-36 133
Msa1358920 AT4G28110.1 53.509 114 51 2 10 122 11 123 4.98e-36 132
Msa1358920 AT4G17785.2 47.328 131 67 2 2 131 4 133 7.68e-36 134
Msa1358920 AT4G17785.1 47.328 131 67 2 2 131 4 133 8.52e-36 134
Msa1358920 AT4G05100.1 53.509 114 51 2 10 122 12 124 9.36e-36 133
Msa1358920 AT1G22640.1 50.847 118 56 2 11 127 12 128 9.91e-36 131
Msa1358920 AT4G01680.3 50.000 118 57 2 11 127 12 128 1.12e-35 130
Msa1358920 AT5G54230.1 52.212 113 52 2 11 122 12 123 1.14e-35 132
Msa1358920 AT5G16770.4 49.565 115 56 2 10 123 11 124 1.49e-35 132
Msa1358920 AT5G16770.3 49.565 115 56 2 10 123 11 124 1.49e-35 132
Msa1358920 AT4G38620.1 53.153 111 50 2 13 122 14 123 1.53e-35 131
Msa1358920 AT5G16770.1 49.565 115 56 2 10 123 11 124 3.02e-35 132
Msa1358920 AT5G16770.2 49.565 115 56 2 10 123 11 124 3.02e-35 132
Msa1358920 AT1G74080.1 38.776 196 110 6 9 197 10 202 3.91e-35 131
Msa1358920 AT4G01680.1 50.000 118 57 2 11 127 12 128 6.76e-35 131
Msa1358920 AT5G65230.1 49.593 123 60 2 10 131 11 132 8.00e-35 130
Msa1358920 AT1G57560.2 51.282 117 55 2 11 126 12 127 1.01e-34 129
Msa1358920 AT1G35515.1 49.558 113 55 2 11 122 12 123 1.39e-34 127
Msa1358920 AT4G34990.1 40.606 165 88 3 13 176 14 169 2.03e-34 128
Msa1358920 AT3G02940.2 48.696 115 57 2 10 123 11 124 3.21e-34 128
Msa1358920 AT1G18570.1 48.305 118 59 2 10 126 12 128 3.26e-34 129
Msa1358920 AT2G16720.1 50.442 113 54 2 11 122 12 123 5.11e-34 127
Msa1358920 AT5G15310.4 48.305 118 59 2 10 126 11 127 5.19e-34 126
Msa1358920 AT3G01140.2 48.305 118 59 2 10 126 11 127 5.85e-34 129
Msa1358920 AT4G09460.1 44.697 132 66 3 13 143 14 139 6.53e-34 125
Msa1358920 AT3G02940.1 48.696 115 57 2 10 123 11 124 6.57e-34 128
Msa1358920 AT3G02940.3 48.696 115 57 2 10 123 11 124 6.57e-34 128
Msa1358920 AT1G09540.1 52.212 113 52 2 11 122 12 123 6.92e-34 129
Msa1358920 AT3G01140.1 48.305 118 59 2 10 126 54 170 7.88e-34 129
Msa1358920 AT3G12720.1 50.442 113 54 2 11 122 22 133 9.00e-34 127
Msa1358920 AT5G15310.1 48.305 118 59 2 10 126 11 127 9.62e-34 127
Msa1358920 AT5G15310.2 48.305 118 59 2 10 126 11 127 9.72e-34 127
Msa1358920 AT5G12870.1 49.153 118 58 2 1 117 8 124 1.96e-33 125
Msa1358920 AT3G08500.1 52.336 107 49 2 11 116 30 135 2.82e-33 127
Msa1358920 AT1G34670.1 50.877 114 54 2 10 122 11 123 2.85e-33 127
Msa1358920 AT5G60890.1 47.059 119 61 2 9 126 10 127 6.90e-33 124
Msa1358920 AT1G18710.1 43.966 116 63 2 10 124 11 125 8.15e-33 124
Msa1358920 AT5G40350.1 35.366 164 104 2 11 173 17 179 1.05e-32 122
Msa1358920 AT3G23250.1 47.619 105 54 1 10 114 11 114 1.13e-32 124
Msa1358920 AT3G13540.1 44.444 117 63 2 7 122 19 134 1.23e-32 122
Msa1358920 AT1G74430.1 43.478 115 63 2 10 123 11 124 1.60e-32 123
Msa1358920 AT4G37780.1 47.541 122 61 3 10 129 11 131 1.87e-32 124
Msa1358920 AT1G56160.1 50.420 119 53 4 4 122 8 120 2.56e-32 123
Msa1358920 AT5G61420.2 47.059 119 61 2 9 126 10 127 2.58e-32 124
Msa1358920 AT5G07690.1 47.899 119 60 2 9 126 10 127 3.94e-32 123
Msa1358920 AT5G23000.1 54.286 105 46 2 11 114 12 115 8.23e-32 122
Msa1358920 AT1G16490.1 39.474 190 87 7 11 180 14 195 9.06e-32 121
Msa1358920 AT5G52600.1 43.382 136 66 3 11 136 12 146 9.41e-32 119
Msa1358920 AT1G06180.1 49.524 105 52 1 10 114 11 114 1.19e-31 120
Msa1358920 AT5G07700.1 47.059 119 61 2 9 126 10 127 1.25e-31 122
Msa1358920 AT5G07700.2 47.059 119 61 2 9 126 10 127 1.25e-31 122
Msa1358920 AT4G01680.2 45.385 130 57 3 11 127 12 140 1.45e-31 122
Msa1358920 AT5G14750.1 46.789 109 57 1 2 110 7 114 2.31e-31 118
Msa1358920 AT3G27920.1 48.598 107 54 1 8 114 11 116 3.70e-31 118
Msa1358920 AT3G13890.2 48.077 104 53 1 11 114 12 114 5.16e-31 121
Msa1358920 AT5G16600.1 48.305 118 59 2 10 126 11 127 5.26e-31 120
Msa1358920 AT3G49690.1 53.333 105 47 2 11 114 12 115 5.69e-31 120
Msa1358920 AT2G36890.1 48.696 115 57 2 11 124 12 125 6.64e-31 119
Msa1358920 AT2G31180.1 42.149 121 69 1 10 130 11 130 6.91e-31 118
Msa1358920 AT3G27810.1 36.095 169 91 3 11 163 20 187 7.93e-31 117
Msa1358920 AT1G66230.1 47.458 118 60 2 10 126 11 127 8.51e-31 119
Msa1358920 AT5G14340.1 45.763 118 62 2 10 126 23 139 9.07e-31 118
Msa1358920 AT2G36890.2 48.696 115 57 2 11 124 53 166 9.90e-31 120
Msa1358920 AT5G62320.1 50.413 121 51 3 10 122 12 131 1.22e-30 117
Msa1358920 AT3G12820.1 48.624 109 53 2 11 117 14 121 1.87e-30 116
Msa1358920 AT4G22680.1 42.949 156 85 4 10 164 11 163 1.90e-30 117
Msa1358920 AT5G65790.1 53.333 105 47 2 11 114 12 115 1.95e-30 120
Msa1358920 AT1G79180.1 41.259 143 80 3 11 150 14 155 1.95e-30 118
Msa1358920 AT1G08810.1 47.706 109 55 2 10 117 11 118 2.38e-30 117
Msa1358920 AT3G47600.1 47.706 109 55 2 10 117 11 118 3.17e-30 118
Msa1358920 AT1G63910.1 49.074 108 54 1 11 118 12 118 3.19e-30 119
Msa1358920 AT5G57620.1 52.727 110 49 3 11 118 12 120 3.81e-30 118
Msa1358920 AT2G47190.1 44.248 113 62 1 2 114 11 122 5.16e-30 116
Msa1358920 AT3G28910.1 47.706 109 55 2 10 117 11 118 5.38e-30 117
Msa1358920 AT5G62470.2 43.284 134 70 3 10 142 11 139 6.73e-30 118
Msa1358920 AT5G40330.1 46.465 99 52 1 12 110 13 110 9.09e-30 114
Msa1358920 AT3G01530.1 45.299 117 62 2 1 116 15 130 1.43e-29 113
Msa1358920 AT1G74650.1 46.154 104 55 1 11 114 12 114 1.88e-29 116
Msa1358920 AT1G48000.1 41.176 136 64 2 11 146 32 151 2.80e-29 114
Msa1358920 AT3G62610.1 47.664 107 54 2 10 115 11 116 3.07e-29 115
Msa1358920 AT5G49330.1 46.535 101 53 1 10 110 11 110 3.31e-29 115
Msa1358920 AT3G28470.1 50.000 100 49 1 11 110 12 110 3.33e-29 115
Msa1358920 AT2G47460.1 47.664 107 54 2 10 115 11 116 5.15e-29 115
Msa1358920 AT1G68320.1 44.444 108 59 1 11 118 19 125 6.43e-29 114
Msa1358920 AT5G35550.1 33.649 211 110 5 11 194 14 221 8.80e-29 112
Msa1358920 AT3G24310.1 48.113 106 54 1 9 114 16 120 9.50e-29 113
Msa1358920 AT5G62470.1 43.284 134 69 4 10 142 11 138 1.22e-28 114
Msa1358920 AT3G13890.1 44.248 113 53 2 11 114 12 123 3.54e-28 113
Msa1358920 AT3G60460.1 47.222 108 55 2 11 117 11 117 4.17e-28 112
Msa1358920 AT1G56650.1 39.855 138 73 2 7 135 4 140 4.52e-28 110
Msa1358920 AT3G30210.1 45.714 105 56 1 10 114 26 129 5.12e-28 111
Msa1358920 AT3G53200.1 49.038 104 52 1 11 114 9 111 6.08e-28 110
Msa1358920 AT1G25340.1 43.925 107 59 1 12 118 19 124 7.86e-28 110
Msa1358920 AT4G12350.1 33.032 221 122 7 11 208 12 229 3.62e-27 109
Msa1358920 AT1G66380.1 46.154 104 55 1 7 110 4 106 4.45e-27 104
Msa1358920 AT3G48920.1 45.455 110 59 1 5 114 12 120 6.52e-27 107
Msa1358920 AT4G13480.1 47.573 103 53 1 12 114 7 108 6.94e-27 107
Msa1358920 AT1G66370.1 45.098 102 55 1 9 110 6 106 7.63e-27 107
Msa1358920 AT1G66390.1 44.444 108 59 1 7 114 4 110 9.24e-26 104
Msa1358920 AT5G26660.2 50.549 91 43 2 44 133 14 103 9.73e-26 105
Msa1358920 AT3G06490.1 46.018 113 60 1 2 114 10 121 1.10e-25 105
Msa1358920 AT3G46130.1 42.149 121 66 2 5 122 3 122 1.14e-25 104
Msa1358920 AT5G59780.3 43.860 114 60 2 12 122 9 121 1.32e-25 103
Msa1358920 AT4G18770.1 45.528 123 63 3 11 131 215 335 1.49e-25 107
Msa1358920 AT1G79180.2 34.091 176 79 4 11 150 14 188 3.99e-25 104
Msa1358920 AT4G25560.1 45.946 111 57 2 12 120 11 120 6.23e-25 102
Msa1358920 AT5G52260.1 46.281 121 60 3 12 131 13 129 6.86e-25 102
Msa1358920 AT5G49620.1 46.154 104 55 1 11 114 26 128 3.34e-24 101
Msa1358920 AT3G50060.1 49.057 106 49 3 13 118 6 106 3.65e-24 101
Msa1358920 AT5G40360.1 44.762 105 56 2 11 115 156 258 4.26e-24 102
Msa1358920 AT1G25340.2 41.121 107 57 2 12 118 19 119 8.51e-24 99.8
Msa1358920 AT3G27785.1 42.593 108 60 2 11 118 187 292 1.12e-23 102
Msa1358920 AT1G25340.3 41.121 107 57 2 12 118 19 119 1.50e-23 99.8
Msa1358920 AT5G58850.1 44.248 113 61 2 2 114 94 204 3.50e-23 100
Msa1358920 AT4G37260.1 45.082 122 64 3 1 121 1 120 6.39e-23 98.2
Msa1358920 AT5G40350.2 34.586 133 85 2 42 173 3 134 7.35e-23 94.4
Msa1358920 AT5G67300.1 48.113 106 50 3 13 118 6 106 8.84e-23 97.4
Msa1358920 AT5G49620.2 41.880 117 55 1 11 114 26 142 1.17e-22 97.4
Msa1358920 AT2G39880.1 48.214 112 53 3 6 114 40 149 1.85e-22 97.8
Msa1358920 AT2G23290.1 47.170 106 51 3 13 118 13 113 2.72e-22 96.3
Msa1358920 AT4G33450.1 38.843 121 71 3 2 121 7 125 1.62e-21 92.8
Msa1358920 AT1G17950.1 41.379 116 59 4 13 121 5 118 2.00e-21 92.4
Msa1358920 AT3G55730.1 47.573 103 50 3 13 114 56 155 2.58e-21 94.7
Msa1358920 AT3G09230.1 45.098 102 54 2 13 114 55 154 2.61e-21 94.7
Msa1358920 AT5G11050.1 43.396 106 58 2 9 114 101 204 3.37e-21 94.7
Msa1358920 AT4G32730.5 43.925 107 58 2 8 114 82 186 3.53e-21 95.9
Msa1358920 AT4G32730.5 34.021 97 63 1 13 109 35 130 9.76e-13 70.1
Msa1358920 AT4G32730.4 43.925 107 58 2 8 114 82 186 3.53e-21 95.9
Msa1358920 AT4G32730.4 34.021 97 63 1 13 109 35 130 9.76e-13 70.1
Msa1358920 AT4G32730.3 43.925 107 58 2 8 114 82 186 3.53e-21 95.9
Msa1358920 AT4G32730.3 34.021 97 63 1 13 109 35 130 9.76e-13 70.1
Msa1358920 AT4G32730.2 43.925 107 58 2 8 114 82 186 3.53e-21 95.9
Msa1358920 AT4G32730.2 34.021 97 63 1 13 109 35 130 9.76e-13 70.1
Msa1358920 AT4G32730.1 43.925 107 58 2 8 114 82 186 3.57e-21 95.5
Msa1358920 AT4G32730.1 34.021 97 63 1 13 109 35 130 9.10e-13 70.1
Msa1358920 AT5G11510.3 42.056 107 60 2 8 114 76 180 4.31e-21 95.5
Msa1358920 AT5G11510.3 32.990 97 64 1 13 109 29 124 3.77e-12 68.2
Msa1358920 AT5G11510.1 42.056 107 60 2 8 114 76 180 4.31e-21 95.5
Msa1358920 AT5G11510.1 32.990 97 64 1 13 109 29 124 3.77e-12 68.2
Msa1358920 AT5G11510.4 42.056 107 60 2 8 114 76 180 4.31e-21 95.5
Msa1358920 AT5G11510.4 32.990 97 64 1 13 109 29 124 3.77e-12 68.2
Msa1358920 AT5G11510.2 42.056 107 60 2 8 114 76 180 5.19e-21 95.1
Msa1358920 AT5G11510.2 32.990 97 64 1 13 109 29 124 4.34e-12 68.2
Msa1358920 AT3G53200.2 56.338 71 30 1 44 114 9 78 5.19e-21 90.5
Msa1358920 AT5G11510.5 42.056 107 60 2 8 114 76 180 5.50e-21 95.1
Msa1358920 AT5G11510.5 32.990 97 64 1 13 109 29 124 4.77e-12 67.8
Msa1358920 AT3G27810.2 35.294 136 71 3 44 163 4 138 1.84e-20 88.2
Msa1358920 AT3G09370.2 36.879 141 81 3 8 142 130 268 3.26e-20 92.4
Msa1358920 AT3G09370.2 34.021 97 63 1 13 109 83 178 8.59e-13 69.7
Msa1358920 AT3G09370.1 36.879 141 81 3 8 142 125 263 3.33e-20 92.4
Msa1358920 AT3G09370.1 34.021 97 63 1 13 109 78 173 8.99e-13 69.7
Msa1358920 AT5G17800.1 40.000 120 66 3 9 124 89 206 4.15e-20 90.1
Msa1358920 AT3G09370.3 36.879 141 81 3 8 142 138 276 4.53e-20 92.0
Msa1358920 AT3G09370.3 34.021 97 63 1 13 109 91 186 1.17e-12 69.3
Msa1358920 AT2G25230.1 40.157 127 66 5 5 124 13 136 6.79e-20 87.8
Msa1358920 AT1G69560.1 38.596 114 65 3 2 112 96 207 9.03e-20 89.4
Msa1358920 AT1G69560.2 36.364 121 74 3 2 121 112 230 9.75e-20 89.7
Msa1358920 AT5G02320.1 40.909 110 62 3 8 116 122 229 2.29e-19 89.7
Msa1358920 AT5G02320.1 35.052 97 62 1 13 109 75 170 6.11e-13 70.5
Msa1358920 AT5G02320.2 40.909 110 62 3 8 116 122 229 2.29e-19 89.7
Msa1358920 AT5G02320.2 35.052 97 62 1 13 109 75 170 6.11e-13 70.5
Msa1358920 AT1G26780.1 41.000 100 57 2 11 110 96 193 2.32e-19 87.4
Msa1358920 AT5G35550.2 33.708 178 88 5 44 194 50 224 2.51e-19 87.0
Msa1358920 AT5G02320.3 40.187 107 62 2 8 114 62 166 2.93e-19 89.4
Msa1358920 AT5G02320.3 35.052 97 62 1 13 109 15 110 6.42e-13 70.1
Msa1358920 AT1G26780.2 41.121 107 58 3 11 114 96 200 3.43e-19 88.2
Msa1358920 AT3G12820.2 51.351 74 33 2 46 117 1 73 4.85e-19 84.3
Msa1358920 AT1G73410.2 40.541 111 62 3 13 122 6 113 5.41e-19 84.7
Msa1358920 AT1G73410.1 40.541 111 62 3 13 122 6 113 5.44e-19 85.5
Msa1358920 AT5G14750.3 47.826 69 35 1 46 114 17 84 5.80e-19 83.6
Msa1358920 AT1G66380.2 50.746 67 33 0 7 73 4 70 1.56e-18 80.9
Msa1358920 AT3G47600.2 49.333 75 36 2 44 117 39 112 6.76e-18 84.0
Msa1358920 AT3G46130.3 46.988 83 40 2 43 122 9 90 1.51e-17 81.3
Msa1358920 AT2G37630.1 42.056 107 59 2 13 117 4 109 1.98e-17 83.2
Msa1358920 AT5G59780.2 47.561 82 39 2 44 122 20 100 3.16e-17 80.1
Msa1358920 AT4G00540.2 40.000 120 63 5 11 127 101 214 3.33e-17 82.8
Msa1358920 AT3G46130.4 47.561 82 39 2 44 122 20 100 4.35e-17 80.1
Msa1358920 AT4G00540.1 40.000 120 63 5 11 127 99 212 5.11e-17 82.4
Msa1358920 AT3G29020.1 35.652 115 72 2 13 127 65 177 5.13e-17 79.7
Msa1358920 AT3G29020.2 38.182 110 65 3 13 121 67 174 5.58e-17 80.9
Msa1358920 AT5G40430.1 37.273 110 64 4 11 119 52 157 2.26e-16 78.6
Msa1358920 AT1G66380.3 47.887 71 36 1 44 114 8 77 9.37e-16 72.8
Msa1358920 AT1G22640.3 46.479 71 36 2 58 127 2 71 2.10e-14 71.6
Msa1358920 AT2G02820.2 33.645 107 68 3 16 121 33 137 3.21e-13 71.2
Msa1358920 AT2G02820.1 33.645 107 68 3 16 121 33 137 3.30e-13 70.9
Msa1358920 AT1G14350.2 33.645 107 68 3 16 121 28 132 6.14e-13 70.1
Msa1358920 AT1G14350.1 33.645 107 68 3 16 121 28 132 6.14e-13 70.1
Msa1358920 AT2G02820.3 33.645 107 68 3 16 121 33 137 8.82e-13 68.9
Msa1358920 AT5G39700.1 34.286 105 67 2 14 118 57 159 1.80e-12 65.9
Msa1358920 AT3G18100.1 38.144 97 58 2 12 108 545 639 1.93e-12 69.3
Msa1358920 AT3G18100.1 33.663 101 65 2 8 108 490 588 2.08e-11 65.9
Msa1358920 AT3G18100.3 38.144 97 58 2 12 108 497 591 2.18e-12 68.9
Msa1358920 AT3G18100.3 33.663 101 65 2 8 108 442 540 2.48e-11 65.9
Msa1358920 AT3G18100.4 38.144 97 58 2 12 108 384 478 2.37e-12 68.6
Msa1358920 AT3G18100.4 33.663 101 65 2 8 108 329 427 2.83e-11 65.5
Msa1358920 AT3G18100.2 38.144 97 58 2 12 108 332 426 2.82e-12 68.6
Msa1358920 AT3G18100.2 33.663 101 65 2 8 108 277 375 3.43e-11 65.1
Msa1358920 AT1G71030.2 36.250 80 49 2 50 128 5 83 3.94e-11 62.0
Msa1358920 AT1G71030.1 36.250 80 49 2 50 128 19 97 5.88e-11 61.6

Find 79 sgRNAs with CRISPR-Local

Find 220 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATACCTCGTTCCAATTTC+TGG 0.105695 tig0016544:-81373 None:intergenic
ATAAATTTGGTTGATGAAAA+AGG 0.165254 tig0016544:+82699 Msa1358920:CDS
TATATACCACAAGTGAAATT+TGG 0.178507 tig0016544:+82189 Msa1358920:CDS
ATACTACTTCAATGATTTAT+AGG 0.202569 tig0016544:+82319 Msa1358920:CDS
ACAAATTTGGTTGATGAAAA+AGG 0.207164 tig0016544:+82831 Msa1358920:CDS
GCATTCCTCTGAGATAAATT+TGG 0.210289 tig0016544:+82686 Msa1358920:CDS
ACATTGTCCTCCAAAGAAAT+TGG 0.248860 tig0016544:-82861 None:intergenic
AGGAAAGAAGCCAATTTCTT+TGG 0.257544 tig0016544:+82851 Msa1358920:CDS
AGCAAGCCATGGTGACTTTA+TGG 0.262915 tig0016544:+82755 Msa1358920:CDS
AGTGGAAGGTATGAACATTC+TGG 0.308537 tig0016544:-82504 None:intergenic
ACATTATTGTAGAGCATGTT+TGG 0.311255 tig0016544:-82273 None:intergenic
AAAATTCTTGATGTCATTAT+CGG 0.314551 tig0016544:-82034 None:intergenic
CTTGTGAATCCTTAACTTGT+TGG 0.323790 tig0016544:-82155 None:intergenic
TTTCAGTTCTTTAACATGTT+TGG 0.331177 tig0016544:+81507 Msa1358920:CDS
TTCAAATAGCCAACAAGTTA+AGG 0.336113 tig0016544:+82146 Msa1358920:CDS
TGTTATATAGACAAGAGAAT+TGG 0.344046 tig0016544:+82640 Msa1358920:CDS
GCATTCGTCTGAGACAAATT+TGG 0.360277 tig0016544:+82818 Msa1358920:CDS
TCATTCAGTTCCATCTTGTC+AGG 0.372533 tig0016544:-82105 None:intergenic
AGCAAACCTTGGTGACTTCA+TGG 0.377523 tig0016544:+82887 Msa1358920:CDS
ATGTCATTATCGGATCTTCC+AGG 0.377868 tig0016544:-82024 None:intergenic
AGGGAAGAAGTCAATTGCTT+TGG 0.381080 tig0016544:+82719 Msa1358920:CDS
CCATGGTGACTTTATGGATC+TGG 0.413335 tig0016544:+82761 Msa1358920:CDS
CATTATTGTAGAGCATGTTT+GGG 0.426415 tig0016544:-82272 None:intergenic
ATCAATTTCAGGGGTAGCAT+TGG 0.428509 tig0016544:+82435 Msa1358920:intron
GTTAAAGAACTGAAAGACTT+TGG 0.428943 tig0016544:-81499 None:intergenic
TCCTCAAATTCCACCACCTA+TGG 0.435136 tig0016544:+82557 Msa1358920:CDS
ACATGTTTGGTGAATTCAAA+TGG 0.437146 tig0016544:+81520 Msa1358920:CDS
ACTTTATGGATCTGGATCTT+CGG 0.437208 tig0016544:+82769 Msa1358920:CDS
AAAGGACCCTTCTTCACATC+TGG 0.443578 tig0016544:-81459 None:intergenic
CCTTCTTCACATCTGGTTGA+AGG 0.447401 tig0016544:-81452 None:intergenic
GTGGAAGGTATGAACATTCT+GGG 0.450013 tig0016544:-82503 None:intergenic
TGGAACTTCTTGTATACCTA+TGG 0.450618 tig0016544:+82455 Msa1358920:CDS
GTTATATAGACAAGAGAATT+GGG 0.451821 tig0016544:+82641 Msa1358920:CDS
CATCACAATGTCTTCATCAA+TGG 0.455355 tig0016544:+81269 None:intergenic
AAAGAAGCCAATTTCTTTGG+AGG 0.456698 tig0016544:+82854 Msa1358920:CDS
TCCATAGGTGGTGGAATTTG+AGG 0.460831 tig0016544:-82558 None:intergenic
TGCGTATAAAAGTGTCTCAT+TGG 0.466056 tig0016544:+82611 Msa1358920:CDS
GTCACCCTTCCCTGACAAGA+TGG 0.495250 tig0016544:+82095 Msa1358920:CDS
TGAAATGTTAAAAGCATATG+TGG 0.496688 tig0016544:+81338 Msa1358920:CDS
GTAAAAGTTGTCGTCTAAGA+TGG 0.497716 tig0016544:+81421 Msa1358920:CDS
CCTTCAACCAGATGTGAAGA+AGG 0.500980 tig0016544:+81452 Msa1358920:CDS
GAGACTCGATATAAGATGTC+AGG 0.509413 tig0016544:+82579 Msa1358920:CDS
TTCTTGTATACCTATGGCTA+TGG 0.515629 tig0016544:+82461 Msa1358920:CDS
AACGAGGTATCAAGAAATGC+GGG 0.517508 tig0016544:+81384 Msa1358920:CDS
CAGTTCCATCTTGTCAGGGA+AGG 0.522410 tig0016544:-82100 None:intergenic
CTTCCTTCACGTATGATGCT+TGG 0.537178 tig0016544:+82528 Msa1358920:CDS
AAACATGCTCTACAATAATG+TGG 0.540325 tig0016544:+82275 Msa1358920:CDS
TGAATTCAAATGGTCTAAGC+TGG 0.550324 tig0016544:+81530 Msa1358920:CDS
AGGAAAATGGTCAAAAGAAG+AGG 0.551314 tig0016544:+81314 Msa1358920:CDS
CATCAATGGATACTAACAAA+GGG 0.551570 tig0016544:+81283 Msa1358920:CDS
TATCGAGTCTCCATAGGTGG+TGG 0.555040 tig0016544:-82567 None:intergenic
ATCAACCAAATTTATCTCAG+AGG 0.568116 tig0016544:-82691 None:intergenic
AGTTCCATCTTGTCAGGGAA+GGG 0.568728 tig0016544:-82099 None:intergenic
AACGATGTTGCAGCAAGCCA+TGG 0.571591 tig0016544:+82744 Msa1358920:CDS
GGTTAGACAATAACGATGCT+AGG 0.577069 tig0016544:+82790 Msa1358920:CDS
AAAAGAAAACTTAAAAGGCG+TGG 0.582597 tig0016544:+82069 Msa1358920:CDS
AACATGCTCTACAATAATGT+GGG 0.582958 tig0016544:+82276 Msa1358920:CDS
GACAATGTTGAAGCAAACCT+TGG 0.585388 tig0016544:+82876 Msa1358920:CDS
AGATCTGATACCATAGCCAT+AGG 0.586469 tig0016544:-82471 None:intergenic
CATTCAGTTCCATCTTGTCA+GGG 0.589321 tig0016544:-82104 None:intergenic
TTGGTGACTTCATGGATCCG+TGG 0.591282 tig0016544:+82895 Msa1358920:CDS
ATGGTCTAAGCTGGCTCACG+AGG 0.595641 tig0016544:+81539 Msa1358920:CDS
TCATCAATGGATACTAACAA+AGG 0.597651 tig0016544:+81282 Msa1358920:CDS
ATCTTATATCGAGTCTCCAT+AGG 0.609623 tig0016544:-82573 None:intergenic
TATAGACAAGAGAATTGGGA+AGG 0.611752 tig0016544:+82645 Msa1358920:CDS
TGGAAGGTATGAACATTCTG+GGG 0.614328 tig0016544:-82502 None:intergenic
CTGAAGTCAATCAAAAGCCA+CGG 0.625068 tig0016544:-82912 None:intergenic
CTTCAACCAGATGTGAAGAA+GGG 0.643415 tig0016544:+81453 Msa1358920:CDS
GAACGAGGTATCAAGAAATG+CGG 0.646070 tig0016544:+81383 Msa1358920:CDS
TTATATCGAGTCTCCATAGG+TGG 0.647338 tig0016544:-82570 None:intergenic
TACGTGAAGGAAGTAGTGGA+AGG 0.655267 tig0016544:-82518 None:intergenic
ATCATACGTGAAGGAAGTAG+TGG 0.655466 tig0016544:-82522 None:intergenic
TCACCAAGCATCATACGTGA+AGG 0.660770 tig0016544:-82531 None:intergenic
CCAGATCCATAAAGTCACCA+TGG 0.674040 tig0016544:-82761 None:intergenic
AATGCGGGGCTTATACGTTG+CGG 0.702899 tig0016544:+81399 Msa1358920:CDS
ACGAGGTATCAAGAAATGCG+GGG 0.708909 tig0016544:+81385 Msa1358920:CDS
ACGGATCCATGAAGTCACCA+AGG 0.720046 tig0016544:-82893 None:intergenic
GGAAGGTATGAACATTCTGG+GGG 0.734313 tig0016544:-82501 None:intergenic
TGGAACCAGAAATTGGAACG+AGG 0.777296 tig0016544:+81368 Msa1358920:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAATTTGTATTTGTTCTT+GGG + tig0016544:81734-81753 Msa1358920:intron 15.0%
!! ATGTTAAAATTGTTTATATG+AGG + tig0016544:82390-82409 Msa1358920:intron 15.0%
!!! ATTAATTTGTATTTGTTCTT+GGG + tig0016544:81734-81753 Msa1358920:intron 15.0%
!! ATGTTAAAATTGTTTATATG+AGG + tig0016544:82390-82409 Msa1358920:intron 15.0%
!! TATCATCAAAATAATCAACA+AGG - tig0016544:81709-81728 None:intergenic 20.0%
!!! CATTAATTTGTATTTGTTCT+TGG + tig0016544:81733-81752 Msa1358920:intron 20.0%
!! AATCTAATAAATAACCAACA+AGG - tig0016544:81789-81808 None:intergenic 20.0%
!! AAAATTCTTGATGTCATTAT+CGG - tig0016544:82037-82056 None:intergenic 20.0%
!!! ATAATGACATCAAGAATTTT+TGG + tig0016544:82037-82056 Msa1358920:CDS 20.0%
!! CAAGAAAAAGAAAACTTAAA+AGG + tig0016544:82064-82083 Msa1358920:CDS 20.0%
!!! AATGATGAGTTGAATAAAAA+TGG + tig0016544:82123-82142 Msa1358920:CDS 20.0%
!! ATACTACTTCAATGATTTAT+AGG + tig0016544:82319-82338 Msa1358920:CDS 20.0%
!!! ATAAATTTGGTTGATGAAAA+AGG + tig0016544:82699-82718 Msa1358920:CDS 20.0%
!!! TAAATTTGGTTGATGAAAAA+GGG + tig0016544:82700-82719 Msa1358920:CDS 20.0%
!! TATCATCAAAATAATCAACA+AGG - tig0016544:81709-81728 None:intergenic 20.0%
!!! CATTAATTTGTATTTGTTCT+TGG + tig0016544:81733-81752 Msa1358920:intron 20.0%
!! AATCTAATAAATAACCAACA+AGG - tig0016544:81789-81808 None:intergenic 20.0%
!! AAAATTCTTGATGTCATTAT+CGG - tig0016544:82037-82056 None:intergenic 20.0%
!!! ATAATGACATCAAGAATTTT+TGG + tig0016544:82037-82056 Msa1358920:CDS 20.0%
!! CAAGAAAAAGAAAACTTAAA+AGG + tig0016544:82064-82083 Msa1358920:CDS 20.0%
!!! AATGATGAGTTGAATAAAAA+TGG + tig0016544:82123-82142 Msa1358920:CDS 20.0%
!! ATACTACTTCAATGATTTAT+AGG + tig0016544:82319-82338 Msa1358920:CDS 20.0%
!!! ATAAATTTGGTTGATGAAAA+AGG + tig0016544:82699-82718 Msa1358920:CDS 20.0%
!!! TAAATTTGGTTGATGAAAAA+GGG + tig0016544:82700-82719 Msa1358920:CDS 20.0%
!! TGAAATGTTAAAAGCATATG+TGG + tig0016544:81338-81357 Msa1358920:CDS 25.0%
!!! GTTTTTTCTTCTTCACTAAA+AGG - tig0016544:81480-81499 None:intergenic 25.0%
! TTTCAGTTCTTTAACATGTT+TGG + tig0016544:81507-81526 Msa1358920:CDS 25.0%
! ATCTCTACTAAACAACTTAT+AGG - tig0016544:81896-81915 None:intergenic 25.0%
! TATATACCACAAGTGAAATT+TGG + tig0016544:82189-82208 Msa1358920:CDS 25.0%
!! TATTTTCCAAATTTCACTTG+TGG - tig0016544:82198-82217 None:intergenic 25.0%
! AGTTACATTCATCAATTTCA+GGG + tig0016544:82425-82444 Msa1358920:intron 25.0%
! TGTTATATAGACAAGAGAAT+TGG + tig0016544:82640-82659 Msa1358920:CDS 25.0%
! GTTATATAGACAAGAGAATT+GGG + tig0016544:82641-82660 Msa1358920:CDS 25.0%
!!! ACAAATTTGGTTGATGAAAA+AGG + tig0016544:82831-82850 Msa1358920:CDS 25.0%
!! TGAAATGTTAAAAGCATATG+TGG + tig0016544:81338-81357 Msa1358920:CDS 25.0%
!!! GTTTTTTCTTCTTCACTAAA+AGG - tig0016544:81480-81499 None:intergenic 25.0%
! TTTCAGTTCTTTAACATGTT+TGG + tig0016544:81507-81526 Msa1358920:CDS 25.0%
! ATCTCTACTAAACAACTTAT+AGG - tig0016544:81896-81915 None:intergenic 25.0%
! TATATACCACAAGTGAAATT+TGG + tig0016544:82189-82208 Msa1358920:CDS 25.0%
!! TATTTTCCAAATTTCACTTG+TGG - tig0016544:82198-82217 None:intergenic 25.0%
! AGTTACATTCATCAATTTCA+GGG + tig0016544:82425-82444 Msa1358920:intron 25.0%
! TGTTATATAGACAAGAGAAT+TGG + tig0016544:82640-82659 Msa1358920:CDS 25.0%
! GTTATATAGACAAGAGAATT+GGG + tig0016544:82641-82660 Msa1358920:CDS 25.0%
!!! ACAAATTTGGTTGATGAAAA+AGG + tig0016544:82831-82850 Msa1358920:CDS 25.0%
TCATCAATGGATACTAACAA+AGG + tig0016544:81282-81301 Msa1358920:CDS 30.0%
CATCAATGGATACTAACAAA+GGG + tig0016544:81283-81302 Msa1358920:CDS 30.0%
ACTAACAAAGGGTTGAAAAA+AGG + tig0016544:81294-81313 Msa1358920:CDS 30.0%
AAGGGTTGAAAAAAGGAAAA+TGG + tig0016544:81301-81320 Msa1358920:CDS 30.0%
AAAGCATATGTGGAAAAACA+TGG + tig0016544:81348-81367 Msa1358920:CDS 30.0%
AAAAACATGGAACCAGAAAT+TGG + tig0016544:81361-81380 Msa1358920:CDS 30.0%
GTTAAAGAACTGAAAGACTT+TGG - tig0016544:81502-81521 None:intergenic 30.0%
! ACATGTTTGGTGAATTCAAA+TGG + tig0016544:81520-81539 Msa1358920:CDS 30.0%
AATGTGTGATCTAACGAATA+TGG - tig0016544:81637-81656 None:intergenic 30.0%
TACTAAACAACTTATAGGCA+TGG - tig0016544:81891-81910 None:intergenic 30.0%
TGATAAGTTGCATGTGAATA+AGG + tig0016544:81916-81935 Msa1358920:intron 30.0%
AAAAGAAAACTTAAAAGGCG+TGG + tig0016544:82069-82088 Msa1358920:CDS 30.0%
TTCAAATAGCCAACAAGTTA+AGG + tig0016544:82146-82165 Msa1358920:CDS 30.0%
CATTATTGTAGAGCATGTTT+GGG - tig0016544:82275-82294 None:intergenic 30.0%
ACATTATTGTAGAGCATGTT+TGG - tig0016544:82276-82295 None:intergenic 30.0%
AAACATGCTCTACAATAATG+TGG + tig0016544:82275-82294 Msa1358920:CDS 30.0%
AACATGCTCTACAATAATGT+GGG + tig0016544:82276-82295 Msa1358920:CDS 30.0%
GAATTGTATATGAAAGACAG+TGG - tig0016544:82363-82382 None:intergenic 30.0%
CAGTTACATTCATCAATTTC+AGG + tig0016544:82424-82443 Msa1358920:intron 30.0%
GTTACATTCATCAATTTCAG+GGG + tig0016544:82426-82445 Msa1358920:intron 30.0%
ATCAACCAAATTTATCTCAG+AGG - tig0016544:82694-82713 None:intergenic 30.0%
TCATCAATGGATACTAACAA+AGG + tig0016544:81282-81301 Msa1358920:CDS 30.0%
CATCAATGGATACTAACAAA+GGG + tig0016544:81283-81302 Msa1358920:CDS 30.0%
ACTAACAAAGGGTTGAAAAA+AGG + tig0016544:81294-81313 Msa1358920:CDS 30.0%
AAGGGTTGAAAAAAGGAAAA+TGG + tig0016544:81301-81320 Msa1358920:CDS 30.0%
AAAGCATATGTGGAAAAACA+TGG + tig0016544:81348-81367 Msa1358920:CDS 30.0%
AAAAACATGGAACCAGAAAT+TGG + tig0016544:81361-81380 Msa1358920:CDS 30.0%
GTTAAAGAACTGAAAGACTT+TGG - tig0016544:81502-81521 None:intergenic 30.0%
! ACATGTTTGGTGAATTCAAA+TGG + tig0016544:81520-81539 Msa1358920:CDS 30.0%
AATGTGTGATCTAACGAATA+TGG - tig0016544:81637-81656 None:intergenic 30.0%
TACTAAACAACTTATAGGCA+TGG - tig0016544:81891-81910 None:intergenic 30.0%
TGATAAGTTGCATGTGAATA+AGG + tig0016544:81916-81935 Msa1358920:intron 30.0%
AAAAGAAAACTTAAAAGGCG+TGG + tig0016544:82069-82088 Msa1358920:CDS 30.0%
TTCAAATAGCCAACAAGTTA+AGG + tig0016544:82146-82165 Msa1358920:CDS 30.0%
CATTATTGTAGAGCATGTTT+GGG - tig0016544:82275-82294 None:intergenic 30.0%
ACATTATTGTAGAGCATGTT+TGG - tig0016544:82276-82295 None:intergenic 30.0%
AAACATGCTCTACAATAATG+TGG + tig0016544:82275-82294 Msa1358920:CDS 30.0%
AACATGCTCTACAATAATGT+GGG + tig0016544:82276-82295 Msa1358920:CDS 30.0%
GAATTGTATATGAAAGACAG+TGG - tig0016544:82363-82382 None:intergenic 30.0%
CAGTTACATTCATCAATTTC+AGG + tig0016544:82424-82443 Msa1358920:intron 30.0%
GTTACATTCATCAATTTCAG+GGG + tig0016544:82426-82445 Msa1358920:intron 30.0%
ATCAACCAAATTTATCTCAG+AGG - tig0016544:82694-82713 None:intergenic 30.0%
AGGAAAATGGTCAAAAGAAG+AGG + tig0016544:81314-81333 Msa1358920:CDS 35.0%
GTAAAAGTTGTCGTCTAAGA+TGG + tig0016544:81421-81440 Msa1358920:CDS 35.0%
TGAATTCAAATGGTCTAAGC+TGG + tig0016544:81530-81549 Msa1358920:CDS 35.0%
TCAACAAGGTATAACACAAG+TGG - tig0016544:81695-81714 None:intergenic 35.0%
ATGGTAATTGATAAACTCCG+TGG - tig0016544:81872-81891 None:intergenic 35.0%
! TTTCTTTTGTGATAGTTGCC+TGG + tig0016544:82006-82025 Msa1358920:intron 35.0%
!! CTTGTGAATCCTTAACTTGT+TGG - tig0016544:82158-82177 None:intergenic 35.0%
TGGAACTTCTTGTATACCTA+TGG + tig0016544:82455-82474 Msa1358920:CDS 35.0%
TTCTTGTATACCTATGGCTA+TGG + tig0016544:82461-82480 Msa1358920:CDS 35.0%
ATCTTATATCGAGTCTCCAT+AGG - tig0016544:82576-82595 None:intergenic 35.0%
!! TGCGTATAAAAGTGTCTCAT+TGG + tig0016544:82611-82630 Msa1358920:CDS 35.0%
TATAGACAAGAGAATTGGGA+AGG + tig0016544:82645-82664 Msa1358920:CDS 35.0%
!! GCATTCCTCTGAGATAAATT+TGG + tig0016544:82686-82705 Msa1358920:CDS 35.0%
ACTTTATGGATCTGGATCTT+CGG + tig0016544:82769-82788 Msa1358920:CDS 35.0%
AGGAAAGAAGCCAATTTCTT+TGG + tig0016544:82851-82870 Msa1358920:CDS 35.0%
AAAGAAGCCAATTTCTTTGG+AGG + tig0016544:82854-82873 Msa1358920:CDS 35.0%
ACATTGTCCTCCAAAGAAAT+TGG - tig0016544:82864-82883 None:intergenic 35.0%
AGGAAAATGGTCAAAAGAAG+AGG + tig0016544:81314-81333 Msa1358920:CDS 35.0%
GTAAAAGTTGTCGTCTAAGA+TGG + tig0016544:81421-81440 Msa1358920:CDS 35.0%
TGAATTCAAATGGTCTAAGC+TGG + tig0016544:81530-81549 Msa1358920:CDS 35.0%
TCAACAAGGTATAACACAAG+TGG - tig0016544:81695-81714 None:intergenic 35.0%
ATGGTAATTGATAAACTCCG+TGG - tig0016544:81872-81891 None:intergenic 35.0%
! TTTCTTTTGTGATAGTTGCC+TGG + tig0016544:82006-82025 Msa1358920:intron 35.0%
!! CTTGTGAATCCTTAACTTGT+TGG - tig0016544:82158-82177 None:intergenic 35.0%
TGGAACTTCTTGTATACCTA+TGG + tig0016544:82455-82474 Msa1358920:CDS 35.0%
TTCTTGTATACCTATGGCTA+TGG + tig0016544:82461-82480 Msa1358920:CDS 35.0%
ATCTTATATCGAGTCTCCAT+AGG - tig0016544:82576-82595 None:intergenic 35.0%
!! TGCGTATAAAAGTGTCTCAT+TGG + tig0016544:82611-82630 Msa1358920:CDS 35.0%
TATAGACAAGAGAATTGGGA+AGG + tig0016544:82645-82664 Msa1358920:CDS 35.0%
!! GCATTCCTCTGAGATAAATT+TGG + tig0016544:82686-82705 Msa1358920:CDS 35.0%
ACTTTATGGATCTGGATCTT+CGG + tig0016544:82769-82788 Msa1358920:CDS 35.0%
AGGAAAGAAGCCAATTTCTT+TGG + tig0016544:82851-82870 Msa1358920:CDS 35.0%
AAAGAAGCCAATTTCTTTGG+AGG + tig0016544:82854-82873 Msa1358920:CDS 35.0%
ACATTGTCCTCCAAAGAAAT+TGG - tig0016544:82864-82883 None:intergenic 35.0%
TGATACCTCGTTCCAATTTC+TGG - tig0016544:81376-81395 None:intergenic 40.0%
! GAACGAGGTATCAAGAAATG+CGG + tig0016544:81383-81402 Msa1358920:CDS 40.0%
! AACGAGGTATCAAGAAATGC+GGG + tig0016544:81384-81403 Msa1358920:CDS 40.0%
CTTCAACCAGATGTGAAGAA+GGG + tig0016544:81453-81472 Msa1358920:CDS 40.0%
! GTGCTATGAATTTGAAGCCA+CGG + tig0016544:81852-81871 Msa1358920:intron 40.0%
AATAAGGTTGAGAGAGCTTC+TGG + tig0016544:81932-81951 Msa1358920:intron 40.0%
ATGTCATTATCGGATCTTCC+AGG - tig0016544:82027-82046 None:intergenic 40.0%
CATTCAGTTCCATCTTGTCA+GGG - tig0016544:82107-82126 None:intergenic 40.0%
TCATTCAGTTCCATCTTGTC+AGG - tig0016544:82108-82127 None:intergenic 40.0%
ATCAATTTCAGGGGTAGCAT+TGG + tig0016544:82435-82454 Msa1358920:intron 40.0%
AGATCTGATACCATAGCCAT+AGG - tig0016544:82474-82493 None:intergenic 40.0%
! TGGAAGGTATGAACATTCTG+GGG - tig0016544:82505-82524 None:intergenic 40.0%
! GTGGAAGGTATGAACATTCT+GGG - tig0016544:82506-82525 None:intergenic 40.0%
! AGTGGAAGGTATGAACATTC+TGG - tig0016544:82507-82526 None:intergenic 40.0%
ATCATACGTGAAGGAAGTAG+TGG - tig0016544:82525-82544 None:intergenic 40.0%
TTATATCGAGTCTCCATAGG+TGG - tig0016544:82573-82592 None:intergenic 40.0%
GAGACTCGATATAAGATGTC+AGG + tig0016544:82579-82598 Msa1358920:CDS 40.0%
AGGGAAGAAGTCAATTGCTT+TGG + tig0016544:82719-82738 Msa1358920:CDS 40.0%
GGTTAGACAATAACGATGCT+AGG + tig0016544:82790-82809 Msa1358920:CDS 40.0%
! GCATTCGTCTGAGACAAATT+TGG + tig0016544:82818-82837 Msa1358920:CDS 40.0%
GACAATGTTGAAGCAAACCT+TGG + tig0016544:82876-82895 Msa1358920:CDS 40.0%
CTGAAGTCAATCAAAAGCCA+CGG - tig0016544:82915-82934 None:intergenic 40.0%
TGATACCTCGTTCCAATTTC+TGG - tig0016544:81376-81395 None:intergenic 40.0%
! GAACGAGGTATCAAGAAATG+CGG + tig0016544:81383-81402 Msa1358920:CDS 40.0%
! AACGAGGTATCAAGAAATGC+GGG + tig0016544:81384-81403 Msa1358920:CDS 40.0%
CTTCAACCAGATGTGAAGAA+GGG + tig0016544:81453-81472 Msa1358920:CDS 40.0%
! GTGCTATGAATTTGAAGCCA+CGG + tig0016544:81852-81871 Msa1358920:intron 40.0%
AATAAGGTTGAGAGAGCTTC+TGG + tig0016544:81932-81951 Msa1358920:intron 40.0%
ATGTCATTATCGGATCTTCC+AGG - tig0016544:82027-82046 None:intergenic 40.0%
CATTCAGTTCCATCTTGTCA+GGG - tig0016544:82107-82126 None:intergenic 40.0%
TCATTCAGTTCCATCTTGTC+AGG - tig0016544:82108-82127 None:intergenic 40.0%
ATCAATTTCAGGGGTAGCAT+TGG + tig0016544:82435-82454 Msa1358920:intron 40.0%
AGATCTGATACCATAGCCAT+AGG - tig0016544:82474-82493 None:intergenic 40.0%
! TGGAAGGTATGAACATTCTG+GGG - tig0016544:82505-82524 None:intergenic 40.0%
! GTGGAAGGTATGAACATTCT+GGG - tig0016544:82506-82525 None:intergenic 40.0%
! AGTGGAAGGTATGAACATTC+TGG - tig0016544:82507-82526 None:intergenic 40.0%
ATCATACGTGAAGGAAGTAG+TGG - tig0016544:82525-82544 None:intergenic 40.0%
TTATATCGAGTCTCCATAGG+TGG - tig0016544:82573-82592 None:intergenic 40.0%
GAGACTCGATATAAGATGTC+AGG + tig0016544:82579-82598 Msa1358920:CDS 40.0%
AGGGAAGAAGTCAATTGCTT+TGG + tig0016544:82719-82738 Msa1358920:CDS 40.0%
GGTTAGACAATAACGATGCT+AGG + tig0016544:82790-82809 Msa1358920:CDS 40.0%
! GCATTCGTCTGAGACAAATT+TGG + tig0016544:82818-82837 Msa1358920:CDS 40.0%
GACAATGTTGAAGCAAACCT+TGG + tig0016544:82876-82895 Msa1358920:CDS 40.0%
CTGAAGTCAATCAAAAGCCA+CGG - tig0016544:82915-82934 None:intergenic 40.0%
TGGAACCAGAAATTGGAACG+AGG + tig0016544:81368-81387 Msa1358920:CDS 45.0%
! ACGAGGTATCAAGAAATGCG+GGG + tig0016544:81385-81404 Msa1358920:CDS 45.0%
CCTTCTTCACATCTGGTTGA+AGG - tig0016544:81455-81474 None:intergenic 45.0%
CCTTCAACCAGATGTGAAGA+AGG + tig0016544:81452-81471 Msa1358920:CDS 45.0%
AAAGGACCCTTCTTCACATC+TGG - tig0016544:81462-81481 None:intergenic 45.0%
CCAACAAGGTATAACAGACG+TGG - tig0016544:81775-81794 None:intergenic 45.0%
CCACGTCTGTTATACCTTGT+TGG + tig0016544:81772-81791 Msa1358920:intron 45.0%
AGTTCCATCTTGTCAGGGAA+GGG - tig0016544:82102-82121 None:intergenic 45.0%
! GGAAGGTATGAACATTCTGG+GGG - tig0016544:82504-82523 None:intergenic 45.0%
! TACGTGAAGGAAGTAGTGGA+AGG - tig0016544:82521-82540 None:intergenic 45.0%
CTTCCTTCACGTATGATGCT+TGG + tig0016544:82528-82547 Msa1358920:CDS 45.0%
TCACCAAGCATCATACGTGA+AGG - tig0016544:82534-82553 None:intergenic 45.0%
TCCTCAAATTCCACCACCTA+TGG + tig0016544:82557-82576 Msa1358920:CDS 45.0%
!! TCCATAGGTGGTGGAATTTG+AGG - tig0016544:82561-82580 None:intergenic 45.0%
AGCAAGCCATGGTGACTTTA+TGG + tig0016544:82755-82774 Msa1358920:CDS 45.0%
CCAGATCCATAAAGTCACCA+TGG - tig0016544:82764-82783 None:intergenic 45.0%
CCATGGTGACTTTATGGATC+TGG + tig0016544:82761-82780 Msa1358920:CDS 45.0%
! AGCAAACCTTGGTGACTTCA+TGG + tig0016544:82887-82906 Msa1358920:CDS 45.0%
TGGAACCAGAAATTGGAACG+AGG + tig0016544:81368-81387 Msa1358920:CDS 45.0%
! ACGAGGTATCAAGAAATGCG+GGG + tig0016544:81385-81404 Msa1358920:CDS 45.0%
CCTTCTTCACATCTGGTTGA+AGG - tig0016544:81455-81474 None:intergenic 45.0%
CCTTCAACCAGATGTGAAGA+AGG + tig0016544:81452-81471 Msa1358920:CDS 45.0%
AAAGGACCCTTCTTCACATC+TGG - tig0016544:81462-81481 None:intergenic 45.0%
CCAACAAGGTATAACAGACG+TGG - tig0016544:81775-81794 None:intergenic 45.0%
CCACGTCTGTTATACCTTGT+TGG + tig0016544:81772-81791 Msa1358920:intron 45.0%
AGTTCCATCTTGTCAGGGAA+GGG - tig0016544:82102-82121 None:intergenic 45.0%
! GGAAGGTATGAACATTCTGG+GGG - tig0016544:82504-82523 None:intergenic 45.0%
! TACGTGAAGGAAGTAGTGGA+AGG - tig0016544:82521-82540 None:intergenic 45.0%
CTTCCTTCACGTATGATGCT+TGG + tig0016544:82528-82547 Msa1358920:CDS 45.0%
TCACCAAGCATCATACGTGA+AGG - tig0016544:82534-82553 None:intergenic 45.0%
TCCTCAAATTCCACCACCTA+TGG + tig0016544:82557-82576 Msa1358920:CDS 45.0%
!! TCCATAGGTGGTGGAATTTG+AGG - tig0016544:82561-82580 None:intergenic 45.0%
AGCAAGCCATGGTGACTTTA+TGG + tig0016544:82755-82774 Msa1358920:CDS 45.0%
CCAGATCCATAAAGTCACCA+TGG - tig0016544:82764-82783 None:intergenic 45.0%
CCATGGTGACTTTATGGATC+TGG + tig0016544:82761-82780 Msa1358920:CDS 45.0%
! AGCAAACCTTGGTGACTTCA+TGG + tig0016544:82887-82906 Msa1358920:CDS 45.0%
AATGCGGGGCTTATACGTTG+CGG + tig0016544:81399-81418 Msa1358920:CDS 50.0%
CAGTTCCATCTTGTCAGGGA+AGG - tig0016544:82103-82122 None:intergenic 50.0%
! TATGAACATTCTGGGGGTGG+AGG - tig0016544:82498-82517 None:intergenic 50.0%
! AGGTATGAACATTCTGGGGG+TGG - tig0016544:82501-82520 None:intergenic 50.0%
TATCGAGTCTCCATAGGTGG+TGG - tig0016544:82570-82589 None:intergenic 50.0%
AACGATGTTGCAGCAAGCCA+TGG + tig0016544:82744-82763 Msa1358920:CDS 50.0%
ACGGATCCATGAAGTCACCA+AGG - tig0016544:82896-82915 None:intergenic 50.0%
! TTGGTGACTTCATGGATCCG+TGG + tig0016544:82895-82914 Msa1358920:CDS 50.0%
AATGCGGGGCTTATACGTTG+CGG + tig0016544:81399-81418 Msa1358920:CDS 50.0%
CAGTTCCATCTTGTCAGGGA+AGG - tig0016544:82103-82122 None:intergenic 50.0%
! TATGAACATTCTGGGGGTGG+AGG - tig0016544:82498-82517 None:intergenic 50.0%
! AGGTATGAACATTCTGGGGG+TGG - tig0016544:82501-82520 None:intergenic 50.0%
TATCGAGTCTCCATAGGTGG+TGG - tig0016544:82570-82589 None:intergenic 50.0%
AACGATGTTGCAGCAAGCCA+TGG + tig0016544:82744-82763 Msa1358920:CDS 50.0%
ACGGATCCATGAAGTCACCA+AGG - tig0016544:82896-82915 None:intergenic 50.0%
! TTGGTGACTTCATGGATCCG+TGG + tig0016544:82895-82914 Msa1358920:CDS 50.0%
! ATGGTCTAAGCTGGCTCACG+AGG + tig0016544:81539-81558 Msa1358920:CDS 55.0%
GTCACCCTTCCCTGACAAGA+TGG + tig0016544:82095-82114 Msa1358920:CDS 55.0%
! ATGGTCTAAGCTGGCTCACG+AGG + tig0016544:81539-81558 Msa1358920:CDS 55.0%
GTCACCCTTCCCTGACAAGA+TGG + tig0016544:82095-82114 Msa1358920:CDS 55.0%
Chromosome Type Strat End Strand Name
tig0016544 gene 81276 82938 81276 ID=Msa1358920;Name=Msa1358920
tig0016544 mRNA 81276 82938 81276 ID=Msa1358920-mRNA-1;Parent=Msa1358920;Name=Msa1358920-mRNA-1;_AED=0.06;_eAED=0.07;_QI=0|0|0|1|1|1|3|0|365
tig0016544 exon 81276 81560 81276 ID=Msa1358920-mRNA-1:exon:11096;Parent=Msa1358920-mRNA-1
tig0016544 exon 82021 82340 82021 ID=Msa1358920-mRNA-1:exon:11097;Parent=Msa1358920-mRNA-1
tig0016544 exon 82446 82938 82446 ID=Msa1358920-mRNA-1:exon:11098;Parent=Msa1358920-mRNA-1
tig0016544 CDS 81276 81560 81276 ID=Msa1358920-mRNA-1:cds;Parent=Msa1358920-mRNA-1
tig0016544 CDS 82021 82340 82021 ID=Msa1358920-mRNA-1:cds;Parent=Msa1358920-mRNA-1
tig0016544 CDS 82446 82938 82446 ID=Msa1358920-mRNA-1:cds;Parent=Msa1358920-mRNA-1
Gene Sequence

>Msa1358920

ATGTCTTCATCAATGGATACTAACAAAGGGTTGAAAAAAGGAAAATGGTCAAAAGAAGAGGATGAAATGTTAAAAGCATATGTGGAAAAACATGGAACCAGAAATTGGAACGAGGTATCAAGAAATGCGGGGCTTATACGTTGCGGTAAAAGTTGTCGTCTAAGATGGTATAATCACCTTCAACCAGATGTGAAGAAGGGTCCTTTTAGTGAAGAAGAAAAAACCAAAGTCTTTCAGTTCTTTAACATGTTTGGTGAATTCAAATGGTCTAAGCTGGCTCACGAGTTGCCTGGAAGATCCGATAATGACATCAAGAATTTTTGGAATGCAAGAAAAAGAAAACTTAAAAGGCGTGGCTTGTCACCCTTCCCTGACAAGATGGAACTGAATGATGAGTTGAATAAAAATGGTTCAAATAGCCAACAAGTTAAGGATTCACAAGATGATGAATTTTATATACCACAAGTGAAATTTGGAAAATATTCATCAATTTATGATAAGATAAGTGAAAACAACTTTGAAAAACTTTTAGATGTCCCAAACATGCTCTACAATAATGTGGGAAGTACTTCTACAAGCAATCATACTACTTCAATGATTTATAGGGGTAGCATTGGAACTTCTTGTATACCTATGGCTATGGTATCAGATCTGCCTCCACCCCCAGAATGTTCATACCTTCCACTACTTCCTTCACGTATGATGCTTGGTGAGTATCCTCAAATTCCACCACCTATGGAGACTCGATATAAGATGTCAGGATCAAGTTCTGCGTATAAAAGTGTCTCATTGGAGTCTATGTTATATAGACAAGAGAATTGGGAAGGCTTCGATGCTAGTCACGTGCATTCCTCTGAGATAAATTTGGTTGATGAAAAAGGGAAGAAGTCAATTGCTTTGGAGAACGATGTTGCAGCAAGCCATGGTGACTTTATGGATCTGGATCTTCGGTTAGACAATAACGATGCTAGGCATGTGCATTCGTCTGAGACAAATTTGGTTGATGAAAAAGGAAAGAAGCCAATTTCTTTGGAGGACAATGTTGAAGCAAACCTTGGTGACTTCATGGATCCGTGGCTTTTGATTGACTTCAGTTGA
Protein sequence

>Msa1358920

MSSSMDTNKGLKKGKWSKEEDEMLKAYVEKHGTRNWNEVSRNAGLIRCGKSCRLRWYNHLQPDVKKGPFSEEEKTKVFQFFNMFGEFKWSKLAHELPGRSDNDIKNFWNARKRKLKRRGLSPFPDKMELNDELNKNGSNSQQVKDSQDDEFYIPQVKFGKYSSIYDKISENNFEKLLDVPNMLYNNVGSTSTSNHTTSMIYRGSIGTSCIPMAMVSDLPPPPECSYLPLLPSRMMLGEYPQIPPPMETRYKMSGSSSAYKSVSLESMLYRQENWEGFDASHVHSSEINLVDEKGKKSIALENDVAASHGDFMDLDLRLDNNDARHVHSSETNLVDEKGKKPISLEDNVEANLGDFMDPWLLIDFS*