Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1360000 | XP_003609137.1 | 98.065 | 155 | 1 | 1 | 1 | 155 | 1 | 153 | 2.10e-107 | 313 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1360000 | sp|P49592|NC2B_ARATH | 82.051 | 156 | 24 | 2 | 1 | 154 | 1 | 154 | 3.41e-90 | 262 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1360000 | G7JT12 | 98.065 | 155 | 1 | 1 | 1 | 155 | 1 | 153 | 1.00e-107 | 313 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1360000 | TF | NF-YB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1360000 | MtrunA17_Chr4g0062271 | 98.065 | 155 | 1 | 1 | 1 | 155 | 1 | 153 | 1.93e-111 | 313 |
| Msa1360000 | MtrunA17_Chr2g0307551 | 83.871 | 155 | 23 | 1 | 1 | 155 | 1 | 153 | 1.46e-95 | 273 |
| Msa1360000 | MtrunA17_Chr1g0185911 | 40.230 | 87 | 48 | 2 | 12 | 96 | 30 | 114 | 1.07e-15 | 70.5 |
| Msa1360000 | MtrunA17_Chr3g0102351 | 36.250 | 80 | 49 | 1 | 12 | 91 | 28 | 105 | 4.04e-14 | 66.6 |
| Msa1360000 | MtrunA17_Chr7g0263601 | 36.585 | 82 | 50 | 1 | 12 | 93 | 27 | 106 | 4.57e-14 | 65.9 |
| Msa1360000 | MtrunA17_Chr5g0446491 | 35.366 | 82 | 51 | 1 | 12 | 93 | 24 | 103 | 5.77e-14 | 65.9 |
| Msa1360000 | MtrunA17_Chr4g0076381 | 37.037 | 81 | 49 | 1 | 11 | 91 | 58 | 136 | 6.02e-14 | 67.0 |
| Msa1360000 | MtrunA17_Chr1g0165041 | 28.125 | 96 | 67 | 1 | 6 | 101 | 1 | 94 | 2.30e-13 | 64.3 |
| Msa1360000 | MtrunA17_Chr2g0296321 | 30.357 | 112 | 70 | 2 | 8 | 113 | 63 | 172 | 5.75e-13 | 64.3 |
| Msa1360000 | MtrunA17_Chr2g0290491 | 31.765 | 85 | 56 | 1 | 7 | 91 | 13 | 95 | 1.49e-12 | 62.0 |
| Msa1360000 | MtrunA17_Chr4g0067091 | 33.333 | 81 | 52 | 1 | 11 | 91 | 22 | 100 | 2.07e-12 | 62.4 |
| Msa1360000 | MtrunA17_Chr8g0384451 | 28.889 | 90 | 62 | 1 | 12 | 101 | 41 | 128 | 2.86e-12 | 62.0 |
| Msa1360000 | MtrunA17_Chr8g0382931 | 31.395 | 86 | 57 | 1 | 5 | 90 | 22 | 105 | 5.80e-12 | 60.8 |
| Msa1360000 | MtrunA17_Chr1g0195851 | 31.250 | 80 | 53 | 1 | 12 | 91 | 37 | 114 | 1.35e-11 | 59.7 |
| Msa1360000 | MtrunA17_Chr4g0076321 | 34.211 | 76 | 48 | 1 | 16 | 91 | 24 | 97 | 2.91e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1360000 | AT5G23090.5 | 82.051 | 156 | 24 | 2 | 1 | 154 | 1 | 154 | 3.46e-91 | 262 |
| Msa1360000 | AT5G23090.2 | 82.051 | 156 | 24 | 2 | 1 | 154 | 1 | 154 | 3.46e-91 | 262 |
| Msa1360000 | AT5G23090.1 | 82.051 | 156 | 24 | 2 | 1 | 154 | 1 | 154 | 3.46e-91 | 262 |
| Msa1360000 | AT5G23090.4 | 81.410 | 156 | 24 | 3 | 1 | 154 | 1 | 153 | 1.28e-88 | 255 |
| Msa1360000 | AT5G08190.1 | 86.713 | 143 | 17 | 1 | 1 | 143 | 1 | 141 | 1.63e-81 | 238 |
| Msa1360000 | AT5G08190.2 | 86.014 | 143 | 17 | 2 | 1 | 143 | 1 | 140 | 6.53e-79 | 231 |
| Msa1360000 | AT5G23090.3 | 74.359 | 156 | 23 | 3 | 1 | 154 | 1 | 141 | 1.61e-78 | 229 |
| Msa1360000 | AT2G38880.7 | 30.476 | 105 | 71 | 1 | 12 | 116 | 22 | 124 | 4.61e-15 | 68.2 |
| Msa1360000 | AT2G38880.3 | 31.776 | 107 | 69 | 2 | 12 | 116 | 22 | 126 | 1.36e-14 | 67.0 |
| Msa1360000 | AT2G38880.11 | 33.684 | 95 | 59 | 2 | 12 | 104 | 22 | 114 | 1.40e-14 | 67.4 |
| Msa1360000 | AT2G38880.8 | 33.684 | 95 | 59 | 2 | 12 | 104 | 22 | 114 | 1.40e-14 | 67.4 |
| Msa1360000 | AT2G38880.2 | 31.776 | 107 | 69 | 2 | 12 | 116 | 22 | 126 | 1.58e-14 | 66.6 |
| Msa1360000 | AT2G38880.1 | 31.776 | 107 | 69 | 2 | 12 | 116 | 22 | 126 | 1.58e-14 | 66.6 |
| Msa1360000 | AT2G38880.5 | 31.776 | 107 | 69 | 2 | 12 | 116 | 22 | 126 | 1.58e-14 | 66.6 |
| Msa1360000 | AT4G14540.1 | 30.392 | 102 | 69 | 1 | 12 | 113 | 22 | 121 | 1.63e-14 | 67.4 |
| Msa1360000 | AT3G53340.5 | 34.314 | 102 | 64 | 2 | 12 | 113 | 30 | 128 | 4.09e-14 | 66.6 |
| Msa1360000 | AT3G53340.1 | 34.314 | 102 | 64 | 2 | 12 | 113 | 30 | 128 | 4.09e-14 | 66.6 |
| Msa1360000 | AT5G47640.1 | 30.088 | 113 | 76 | 2 | 12 | 124 | 28 | 137 | 5.29e-14 | 66.6 |
| Msa1360000 | AT2G37060.2 | 35.366 | 82 | 51 | 1 | 12 | 93 | 31 | 110 | 5.47e-14 | 66.2 |
| Msa1360000 | AT2G37060.3 | 35.366 | 82 | 51 | 1 | 12 | 93 | 31 | 110 | 5.47e-14 | 66.2 |
| Msa1360000 | AT2G37060.1 | 35.366 | 82 | 51 | 1 | 12 | 93 | 31 | 110 | 5.47e-14 | 66.2 |
| Msa1360000 | AT2G38880.4 | 34.483 | 87 | 53 | 2 | 12 | 96 | 22 | 106 | 6.35e-14 | 64.3 |
| Msa1360000 | AT5G47670.2 | 37.037 | 81 | 49 | 1 | 11 | 91 | 29 | 107 | 8.30e-14 | 66.2 |
| Msa1360000 | AT5G47670.1 | 36.145 | 83 | 51 | 1 | 11 | 93 | 58 | 138 | 1.16e-13 | 66.2 |
| Msa1360000 | AT5G47670.3 | 36.145 | 83 | 51 | 1 | 11 | 93 | 58 | 138 | 1.16e-13 | 66.2 |
| Msa1360000 | AT3G53340.4 | 36.250 | 80 | 49 | 1 | 12 | 91 | 30 | 107 | 5.23e-13 | 62.4 |
| Msa1360000 | AT2G38880.9 | 30.612 | 98 | 66 | 1 | 12 | 109 | 22 | 117 | 1.18e-12 | 62.0 |
| Msa1360000 | AT2G38880.10 | 30.612 | 98 | 66 | 1 | 12 | 109 | 22 | 117 | 1.18e-12 | 62.0 |
| Msa1360000 | AT2G38880.6 | 30.612 | 98 | 66 | 1 | 12 | 109 | 22 | 117 | 1.18e-12 | 62.0 |
| Msa1360000 | AT3G53340.3 | 32.222 | 90 | 59 | 1 | 12 | 101 | 30 | 117 | 1.31e-12 | 62.0 |
| Msa1360000 | AT3G53340.2 | 32.222 | 90 | 59 | 1 | 12 | 101 | 30 | 117 | 1.31e-12 | 62.0 |
| Msa1360000 | AT1G21970.1 | 31.325 | 83 | 55 | 1 | 11 | 93 | 59 | 139 | 2.11e-12 | 63.2 |
| Msa1360000 | AT2G13570.1 | 31.646 | 79 | 52 | 1 | 12 | 90 | 37 | 113 | 3.32e-11 | 59.3 |
| Msa1360000 | AT1G09030.1 | 29.268 | 82 | 56 | 1 | 12 | 93 | 4 | 83 | 4.89e-11 | 57.8 |
Find 76 sgRNAs with CRISPR-Local
Find 540 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCTAGCTAATCTAATTT+TGG | 0.141370 | tig0016871:+30506 | None:intergenic |
| TGGTCACCATCTGGCTGTTT+TGG | 0.240495 | tig0016871:+30526 | None:intergenic |
| TGGTTTATTCACTTACTTAC+AGG | 0.252513 | tig0016871:+34142 | None:intergenic |
| ATACTTTAAAAGCTGGTAAA+TGG | 0.274950 | tig0016871:-30645 | Msa1360000:CDS |
| TGGGTTGATATATAAATTTA+TGG | 0.301770 | tig0016871:+34105 | None:intergenic |
| CGCTCGCTCGCAACAAGAAT+TGG | 0.318059 | tig0016871:-34178 | Msa1360000:five_prime_UTR |
| AGGACCGACCTCTGCTATAT+TGG | 0.324322 | tig0016871:-30485 | Msa1360000:three_prime_UTR |
| TTTCCCCAGGTGCTTGGATT+TGG | 0.324476 | tig0016871:-31487 | Msa1360000:intron |
| AAAATTATTCACTAGTTTGC+TGG | 0.340513 | tig0016871:-30401 | Msa1360000:three_prime_UTR |
| AGTAAGTGGAAAACGCGTTT+TGG | 0.343204 | tig0016871:-34229 | None:intergenic |
| GGTGAAGACATGGTTGGGTT+GGG | 0.381862 | tig0016871:+34086 | None:intergenic |
| CAGCAAGATACTTTAAAAGC+TGG | 0.415421 | tig0016871:-30652 | Msa1360000:CDS |
| TGCGCCTGAGCACGTATTGA+AGG | 0.421286 | tig0016871:-32258 | Msa1360000:CDS |
| AGCACTCGATCAATAGATCT+TGG | 0.421579 | tig0016871:+33032 | None:intergenic |
| CTCTCTGCTACATACTTCAT+TGG | 0.429101 | tig0016871:+32295 | None:intergenic |
| TAAATTTATGGAGAAGAGAA+TGG | 0.429357 | tig0016871:+34117 | None:intergenic |
| CAATTCTTCTTCAGTTCAAT+CGG | 0.432071 | tig0016871:-34022 | Msa1360000:intron |
| GAGCGAGCGAGCATACGCTT+AGG | 0.440934 | tig0016871:+34192 | None:intergenic |
| TATGTAGCAGAGAGGACAAA+AGG | 0.468267 | tig0016871:-32286 | Msa1360000:CDS |
| TTATGGAGAAGAGAATGGTT+TGG | 0.473705 | tig0016871:+34122 | None:intergenic |
| GGGTGAAGACATGGTTGGGT+TGG | 0.476941 | tig0016871:+34085 | None:intergenic |
| GAAGCACGGACAGGAGTAAG+AGG | 0.478497 | tig0016871:+30445 | None:intergenic |
| GCACGTATTGAAGGCTCTAC+AGG | 0.479345 | tig0016871:-32249 | Msa1360000:intron |
| ATGAATGTAACAGAAATAAA+CGG | 0.481772 | tig0016871:+30208 | None:intergenic |
| CGATTTGCCAACGATATCCA+TGG | 0.490386 | tig0016871:+33899 | None:intergenic |
| GGTGAAGGAGGAGGCGCAGA+GGG | 0.490980 | tig0016871:+34065 | None:intergenic |
| GAGGCCCGCGCTAGGATGAA+TGG | 0.491671 | tig0016871:-30562 | Msa1360000:CDS |
| CAGAGGGTGAAGACATGGTT+GGG | 0.495823 | tig0016871:+34081 | None:intergenic |
| CCCGCGCTAGGATGAATGGT+GGG | 0.499784 | tig0016871:-30558 | Msa1360000:CDS |
| CAAAATTAGATTAGCTAGGA+AGG | 0.514662 | tig0016871:-30505 | Msa1360000:exon |
| GCACTCGATCAATAGATCTT+GGG | 0.526789 | tig0016871:+33033 | None:intergenic |
| AGGTTAAATTATGGATCCCA+TGG | 0.527047 | tig0016871:-33916 | Msa1360000:exon |
| CCCACCATTCATCCTAGCGC+GGG | 0.529331 | tig0016871:+30558 | None:intergenic |
| AGAGCCTTCAATACGTGCTC+AGG | 0.530619 | tig0016871:+32254 | None:intergenic |
| AGCTCACAGGAAGCACGGAC+AGG | 0.544447 | tig0016871:+30436 | None:intergenic |
| GACGAAGACGGTGAAGGAGG+AGG | 0.547112 | tig0016871:+34056 | None:intergenic |
| CGTGAAGACGAAGACGGTGA+AGG | 0.559050 | tig0016871:+34050 | None:intergenic |
| TTATTCACTTACTTACAGGA+TGG | 0.560446 | tig0016871:+34146 | None:intergenic |
| CTATTGATCGAGTGCTGTGT+AGG | 0.564923 | tig0016871:-33025 | Msa1360000:intron |
| CCCCACCATTCATCCTAGCG+CGG | 0.565574 | tig0016871:+30557 | None:intergenic |
| GCAGAGGGTGAAGACATGGT+TGG | 0.576788 | tig0016871:+34080 | None:intergenic |
| AAAGCTGGTAAATGGAGCAA+TGG | 0.581041 | tig0016871:-30637 | Msa1360000:CDS |
| TAGTGTGTAGAAGATCCAAA+AGG | 0.583993 | tig0016871:+30280 | None:intergenic |
| AGCATACGAACAACACAAGC+TGG | 0.587192 | tig0016871:-31440 | Msa1360000:CDS |
| AGGCGCAGAGGGTGAAGACA+TGG | 0.589515 | tig0016871:+34076 | None:intergenic |
| CGGTGAAGGAGGAGGCGCAG+AGG | 0.590540 | tig0016871:+34064 | None:intergenic |
| GTTTATAAATCTCATCTCAT+CGG | 0.592523 | tig0016871:-32321 | Msa1360000:CDS |
| ATGGATCCCATGGATATCGT+TGG | 0.592534 | tig0016871:-33906 | Msa1360000:CDS |
| GCTATATTGGAGCACATAGG+AGG | 0.600323 | tig0016871:-30472 | Msa1360000:three_prime_UTR |
| AATTGAGCTCACAGGAAGCA+CGG | 0.602703 | tig0016871:+30431 | None:intergenic |
| TGACCAAAATTAGATTAGCT+AGG | 0.603970 | tig0016871:-30509 | Msa1360000:exon |
| ATGTGATTCTAAACAGAAGA+GGG | 0.604038 | tig0016871:+30319 | None:intergenic |
| GGATATCGTTGGCAAATCGA+AGG | 0.607995 | tig0016871:-33895 | Msa1360000:CDS |
| GATTTGCCAACGATATCCAT+GGG | 0.608748 | tig0016871:+33900 | None:intergenic |
| TTGTACACAATTGAGCTCAC+AGG | 0.609129 | tig0016871:+30423 | None:intergenic |
| CACTAGTTTGCTGGCCAATG+TGG | 0.611666 | tig0016871:-30392 | Msa1360000:three_prime_UTR |
| AATTCATCGATAAAATACAA+TGG | 0.623929 | tig0016871:+30360 | None:intergenic |
| GAAGACGAAGACGGTGAAGG+AGG | 0.625107 | tig0016871:+34053 | None:intergenic |
| AATGGAGAGCACATCCACAT+TGG | 0.629798 | tig0016871:+30378 | None:intergenic |
| AAGCATTAGCAGAACAACAA+AGG | 0.632993 | tig0016871:-30594 | Msa1360000:CDS |
| TGCTCCAATATAGCAGAGGT+CGG | 0.635764 | tig0016871:+30481 | None:intergenic |
| GCCCGCGCTAGGATGAATGG+TGG | 0.635837 | tig0016871:-30559 | Msa1360000:CDS |
| ACAACACAAGCTGGAGACCA+TGG | 0.639569 | tig0016871:-31431 | Msa1360000:intron |
| CATGTGATTCTAAACAGAAG+AGG | 0.642354 | tig0016871:+30318 | None:intergenic |
| CAATATCAGAAATATTAATG+TGG | 0.647267 | tig0016871:-30185 | Msa1360000:three_prime_UTR |
| GAAGATGCTTCGCTTCCCAA+AGG | 0.654221 | tig0016871:-33873 | Msa1360000:intron |
| AACAGAAATAAACGGAACGA+TGG | 0.659340 | tig0016871:+30216 | None:intergenic |
| ATTGCTCCAAAACAGCCAGA+TGG | 0.666319 | tig0016871:-30532 | Msa1360000:CDS |
| CCGCGCTAGGATGAATGGTG+GGG | 0.672298 | tig0016871:-30557 | Msa1360000:CDS |
| GAGATGCGTGAAGACGAAGA+CGG | 0.673292 | tig0016871:+34044 | None:intergenic |
| TATGTGCTCCAATATAGCAG+AGG | 0.684635 | tig0016871:+30477 | None:intergenic |
| ACAACAAAGGATGTTTGCAG+AGG | 0.686768 | tig0016871:-30581 | Msa1360000:CDS |
| TCTGCTATATTGGAGCACAT+AGG | 0.687889 | tig0016871:-30475 | Msa1360000:three_prime_UTR |
| CTTGGGTGTCTCTCGCCACG+CGG | 0.690389 | tig0016871:+33050 | None:intergenic |
| CAATGAAGTATGTAGCAGAG+AGG | 0.698906 | tig0016871:-32294 | Msa1360000:CDS |
| CAATGGAGCTGAGATGACTG+AGG | 0.705174 | tig0016871:-30620 | Msa1360000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTATTATTTTTTTT+AGG | - | tig0016871:30438-30457 | Msa1360000:three_prime_UTR | 0.0% |
| !!! | AATTTTTTATTATTTTTTTT+AGG | - | tig0016871:30438-30457 | Msa1360000:three_prime_UTR | 0.0% |
| !!! | ATTTTTTTTAGGTTAAATTA+TGG | - | tig0016871:30449-30468 | Msa1360000:three_prime_UTR | 10.0% |
| !!! | ATTACTAATATTTGTTTTAT+CGG | - | tig0016871:30539-30558 | Msa1360000:CDS | 10.0% |
| !! | TTTATAATGATAATTAATAG+TGG | - | tig0016871:31156-31175 | Msa1360000:intron | 10.0% |
| !!! | ATGTTTTTTTATTTTTTTTG+AGG | - | tig0016871:31619-31638 | Msa1360000:intron | 10.0% |
| !!! | TGTTTTTTTATTTTTTTTGA+GGG | - | tig0016871:31620-31639 | Msa1360000:intron | 10.0% |
| !!! | ATTTATTTCAATTCTAAAAT+CGG | - | tig0016871:32761-32780 | Msa1360000:intron | 10.0% |
| !!! | ATTTTTTTTAGGTTAAATTA+TGG | - | tig0016871:30449-30468 | Msa1360000:three_prime_UTR | 10.0% |
| !!! | ATTACTAATATTTGTTTTAT+CGG | - | tig0016871:30539-30558 | Msa1360000:CDS | 10.0% |
| !! | TTTATAATGATAATTAATAG+TGG | - | tig0016871:31156-31175 | Msa1360000:intron | 10.0% |
| !!! | ATGTTTTTTTATTTTTTTTG+AGG | - | tig0016871:31619-31638 | Msa1360000:intron | 10.0% |
| !!! | TGTTTTTTTATTTTTTTTGA+GGG | - | tig0016871:31620-31639 | Msa1360000:intron | 10.0% |
| !!! | ATTTATTTCAATTCTAAAAT+CGG | - | tig0016871:32761-32780 | Msa1360000:intron | 10.0% |
| !! | ATTAATAAATAGAGAAAAGA+AGG | + | tig0016871:30421-30440 | None:intergenic | 15.0% |
| !! | AACAATGACAAAAATAATTA+AGG | - | tig0016871:31282-31301 | Msa1360000:intron | 15.0% |
| !!! | TGAGTTTATTATTTTATTTC+AGG | - | tig0016871:31426-31445 | Msa1360000:intron | 15.0% |
| !!! | GAGTTTATTATTTTATTTCA+GGG | - | tig0016871:31427-31446 | Msa1360000:intron | 15.0% |
| !!! | AACATTTTAATTATAATCCA+TGG | + | tig0016871:31577-31596 | None:intergenic | 15.0% |
| !!! | GTTTTTTTATTTTTTTTGAG+GGG | - | tig0016871:31621-31640 | Msa1360000:intron | 15.0% |
| !! | GCAAATTTATATAATCTTAT+GGG | + | tig0016871:31838-31857 | None:intergenic | 15.0% |
| !! | CTAAGATTATCAAAAATAAA+TGG | + | tig0016871:31984-32003 | None:intergenic | 15.0% |
| !! | ATTAAATTTGACTATTCAAA+TGG | - | tig0016871:32210-32229 | Msa1360000:intron | 15.0% |
| !! | TTAAATTTGACTATTCAAAT+GGG | - | tig0016871:32211-32230 | Msa1360000:intron | 15.0% |
| !! | AATAGATCTTTAATCAATAA+AGG | + | tig0016871:32482-32501 | None:intergenic | 15.0% |
| !! | CTTAACTAAAAAAAAACTAT+GGG | + | tig0016871:32607-32626 | None:intergenic | 15.0% |
| !!! | TAAATTTGTTTTGAATGAAA+TGG | + | tig0016871:32746-32765 | None:intergenic | 15.0% |
| !!! | TTTTACACTATTTTTTGTTT+TGG | + | tig0016871:33073-33092 | None:intergenic | 15.0% |
| !! | TTTAAAAACACAAACTAAAA+TGG | + | tig0016871:33140-33159 | None:intergenic | 15.0% |
| !!! | TTTAGTTTGTGTTTTTAAAT+CGG | - | tig0016871:33141-33160 | Msa1360000:intron | 15.0% |
| !!! | TAATTATTTTATTTGCCTTT+TGG | - | tig0016871:34079-34098 | Msa1360000:five_prime_UTR | 15.0% |
| !! | ATTAATAAATAGAGAAAAGA+AGG | + | tig0016871:30421-30440 | None:intergenic | 15.0% |
| !! | AACAATGACAAAAATAATTA+AGG | - | tig0016871:31282-31301 | Msa1360000:intron | 15.0% |
| !!! | TGAGTTTATTATTTTATTTC+AGG | - | tig0016871:31426-31445 | Msa1360000:intron | 15.0% |
| !!! | GAGTTTATTATTTTATTTCA+GGG | - | tig0016871:31427-31446 | Msa1360000:intron | 15.0% |
| !!! | AACATTTTAATTATAATCCA+TGG | + | tig0016871:31577-31596 | None:intergenic | 15.0% |
| !!! | GTTTTTTTATTTTTTTTGAG+GGG | - | tig0016871:31621-31640 | Msa1360000:intron | 15.0% |
| !! | GCAAATTTATATAATCTTAT+GGG | + | tig0016871:31838-31857 | None:intergenic | 15.0% |
| !! | CTAAGATTATCAAAAATAAA+TGG | + | tig0016871:31984-32003 | None:intergenic | 15.0% |
| !! | ATTAAATTTGACTATTCAAA+TGG | - | tig0016871:32210-32229 | Msa1360000:intron | 15.0% |
| !! | TTAAATTTGACTATTCAAAT+GGG | - | tig0016871:32211-32230 | Msa1360000:intron | 15.0% |
| !! | AATAGATCTTTAATCAATAA+AGG | + | tig0016871:32482-32501 | None:intergenic | 15.0% |
| !! | CTTAACTAAAAAAAAACTAT+GGG | + | tig0016871:32607-32626 | None:intergenic | 15.0% |
| !!! | TAAATTTGTTTTGAATGAAA+TGG | + | tig0016871:32746-32765 | None:intergenic | 15.0% |
| !!! | TTTTACACTATTTTTTGTTT+TGG | + | tig0016871:33073-33092 | None:intergenic | 15.0% |
| !! | TTTAAAAACACAAACTAAAA+TGG | + | tig0016871:33140-33159 | None:intergenic | 15.0% |
| !!! | TTTAGTTTGTGTTTTTAAAT+CGG | - | tig0016871:33141-33160 | Msa1360000:intron | 15.0% |
| !!! | TAATTATTTTATTTGCCTTT+TGG | - | tig0016871:34079-34098 | Msa1360000:five_prime_UTR | 15.0% |
| !!! | TGGGTTGATATATAAATTTA+TGG | + | tig0016871:30272-30291 | None:intergenic | 20.0% |
| !! | TTTAAATATGCAATGTCTTT+AGG | - | tig0016871:30657-30676 | Msa1360000:intron | 20.0% |
| !! | TTAGGATATAATTGGAAAAT+TGG | - | tig0016871:30675-30694 | Msa1360000:intron | 20.0% |
| !! | CCTGTTCAAAAAAAAAAAAA+CGG | + | tig0016871:30779-30798 | None:intergenic | 20.0% |
| !! | ACAAATATTATATACTCTGA+TGG | + | tig0016871:30875-30894 | None:intergenic | 20.0% |
| !! | AAACAGAAAAACATTAAACT+GGG | + | tig0016871:31013-31032 | None:intergenic | 20.0% |
| !!! | CAATGGACAATTTTTTAAAT+GGG | - | tig0016871:31122-31141 | Msa1360000:intron | 20.0% |
| !!! | CTCTATTTTATTTGTTTCTA+GGG | - | tig0016871:31215-31234 | Msa1360000:intron | 20.0% |
| !!! | TGAGTTTCTTCTTTTATTTT+AGG | - | tig0016871:31470-31489 | Msa1360000:CDS | 20.0% |
| !! | AATAATAACCAAATATCACT+AGG | + | tig0016871:31667-31686 | None:intergenic | 20.0% |
| !! | TTAATTTAGATTCAAATCTG+AGG | - | tig0016871:31734-31753 | Msa1360000:intron | 20.0% |
| !! | TACTATATGACTGTATATTA+TGG | + | tig0016871:31802-31821 | None:intergenic | 20.0% |
| !! | GGCAAATTTATATAATCTTA+TGG | + | tig0016871:31839-31858 | None:intergenic | 20.0% |
| !! | AGACAGACATAAAATAAAAA+TGG | + | tig0016871:31920-31939 | None:intergenic | 20.0% |
| !!! | TGTCTGTCTAAATTTTTTTT+AGG | - | tig0016871:31931-31950 | Msa1360000:intron | 20.0% |
| !!! | AAATTTTTTTTAGGCTGTTT+AGG | - | tig0016871:31940-31959 | Msa1360000:intron | 20.0% |
| !! | AAAGTGAAATGAAATAAATG+TGG | + | tig0016871:32389-32408 | None:intergenic | 20.0% |
| !!! | GTATTGAGTAGTTAAATTTT+AGG | + | tig0016871:32446-32465 | None:intergenic | 20.0% |
| !! | CCTTAACTAAAAAAAAACTA+TGG | + | tig0016871:32608-32627 | None:intergenic | 20.0% |
| !!! | CCATAGTTTTTTTTTAGTTA+AGG | - | tig0016871:32605-32624 | Msa1360000:intron | 20.0% |
| !! | ATTCATAATCAAAATTACCA+TGG | + | tig0016871:32963-32982 | None:intergenic | 20.0% |
| !!! | CAAGTATTCATACATTTTAA+AGG | + | tig0016871:33047-33066 | None:intergenic | 20.0% |
| !!! | TTAGTTTGTGTTTTTAAATC+GGG | - | tig0016871:33142-33161 | Msa1360000:intron | 20.0% |
| !! | ATAACTACTAAGAAATATGT+AGG | + | tig0016871:33390-33409 | None:intergenic | 20.0% |
| !! | AAAAGTAAAATCATATGCAA+TGG | + | tig0016871:33659-33678 | None:intergenic | 20.0% |
| !! | AATTCATCGATAAAATACAA+TGG | + | tig0016871:34017-34036 | None:intergenic | 20.0% |
| !! | ATGAATGTAACAGAAATAAA+CGG | + | tig0016871:34169-34188 | None:intergenic | 20.0% |
| !! | CAATATCAGAAATATTAATG+TGG | - | tig0016871:34189-34208 | Msa1360000:five_prime_UTR | 20.0% |
| !!! | TGGGTTGATATATAAATTTA+TGG | + | tig0016871:30272-30291 | None:intergenic | 20.0% |
| !! | TTTAAATATGCAATGTCTTT+AGG | - | tig0016871:30657-30676 | Msa1360000:intron | 20.0% |
| !! | TTAGGATATAATTGGAAAAT+TGG | - | tig0016871:30675-30694 | Msa1360000:intron | 20.0% |
| !! | CCTGTTCAAAAAAAAAAAAA+CGG | + | tig0016871:30779-30798 | None:intergenic | 20.0% |
| !! | ACAAATATTATATACTCTGA+TGG | + | tig0016871:30875-30894 | None:intergenic | 20.0% |
| !! | AAACAGAAAAACATTAAACT+GGG | + | tig0016871:31013-31032 | None:intergenic | 20.0% |
| !!! | CAATGGACAATTTTTTAAAT+GGG | - | tig0016871:31122-31141 | Msa1360000:intron | 20.0% |
| !!! | CTCTATTTTATTTGTTTCTA+GGG | - | tig0016871:31215-31234 | Msa1360000:intron | 20.0% |
| !!! | TGAGTTTCTTCTTTTATTTT+AGG | - | tig0016871:31470-31489 | Msa1360000:CDS | 20.0% |
| !! | AATAATAACCAAATATCACT+AGG | + | tig0016871:31667-31686 | None:intergenic | 20.0% |
| !! | TTAATTTAGATTCAAATCTG+AGG | - | tig0016871:31734-31753 | Msa1360000:intron | 20.0% |
| !! | TACTATATGACTGTATATTA+TGG | + | tig0016871:31802-31821 | None:intergenic | 20.0% |
| !! | GGCAAATTTATATAATCTTA+TGG | + | tig0016871:31839-31858 | None:intergenic | 20.0% |
| !! | AGACAGACATAAAATAAAAA+TGG | + | tig0016871:31920-31939 | None:intergenic | 20.0% |
| !!! | TGTCTGTCTAAATTTTTTTT+AGG | - | tig0016871:31931-31950 | Msa1360000:intron | 20.0% |
| !!! | AAATTTTTTTTAGGCTGTTT+AGG | - | tig0016871:31940-31959 | Msa1360000:intron | 20.0% |
| !! | AAAGTGAAATGAAATAAATG+TGG | + | tig0016871:32389-32408 | None:intergenic | 20.0% |
| !!! | GTATTGAGTAGTTAAATTTT+AGG | + | tig0016871:32446-32465 | None:intergenic | 20.0% |
| !! | CCTTAACTAAAAAAAAACTA+TGG | + | tig0016871:32608-32627 | None:intergenic | 20.0% |
| !!! | CCATAGTTTTTTTTTAGTTA+AGG | - | tig0016871:32605-32624 | Msa1360000:intron | 20.0% |
| !! | ATTCATAATCAAAATTACCA+TGG | + | tig0016871:32963-32982 | None:intergenic | 20.0% |
| !!! | CAAGTATTCATACATTTTAA+AGG | + | tig0016871:33047-33066 | None:intergenic | 20.0% |
| !!! | TTAGTTTGTGTTTTTAAATC+GGG | - | tig0016871:33142-33161 | Msa1360000:intron | 20.0% |
| !! | ATAACTACTAAGAAATATGT+AGG | + | tig0016871:33390-33409 | None:intergenic | 20.0% |
| !! | AAAAGTAAAATCATATGCAA+TGG | + | tig0016871:33659-33678 | None:intergenic | 20.0% |
| !! | AATTCATCGATAAAATACAA+TGG | + | tig0016871:34017-34036 | None:intergenic | 20.0% |
| !! | ATGAATGTAACAGAAATAAA+CGG | + | tig0016871:34169-34188 | None:intergenic | 20.0% |
| !! | CAATATCAGAAATATTAATG+TGG | - | tig0016871:34189-34208 | Msa1360000:five_prime_UTR | 20.0% |
| ! | TAAATTTATGGAGAAGAGAA+TGG | + | tig0016871:30260-30279 | None:intergenic | 25.0% |
| ! | AAATTGGATGAGGATATAAT+TGG | - | tig0016871:30630-30649 | Msa1360000:CDS | 25.0% |
| !!! | CAATGTCTTTAGGATATAAT+TGG | - | tig0016871:30667-30686 | Msa1360000:intron | 25.0% |
| ! | AACTCATATTCAGAATCTTA+GGG | + | tig0016871:30721-30740 | None:intergenic | 25.0% |
| ! | AAACTCATATTCAGAATCTT+AGG | + | tig0016871:30722-30741 | None:intergenic | 25.0% |
| !!! | CCGTTTTTTTTTTTTTGAAC+AGG | - | tig0016871:30776-30795 | Msa1360000:intron | 25.0% |
| !! | CAAAGAGTGCAATTTAAAAA+CGG | + | tig0016871:30811-30830 | None:intergenic | 25.0% |
| ! | CAAACAGAAAAACATTAAAC+TGG | + | tig0016871:31014-31033 | None:intergenic | 25.0% |
| !! | TTAATGTTTTTCTGTTTGCA+AGG | - | tig0016871:31016-31035 | Msa1360000:intron | 25.0% |
| !! | TACTACTGTTTTGTGAAAAT+TGG | - | tig0016871:31067-31086 | Msa1360000:intron | 25.0% |
| ! | TTTATATAACAGTTGTCGAA+AGG | - | tig0016871:31096-31115 | Msa1360000:intron | 25.0% |
| ! | CCATTTAAAAAATTGTCCAT+TGG | + | tig0016871:31124-31143 | None:intergenic | 25.0% |
| !!! | CCAATGGACAATTTTTTAAA+TGG | - | tig0016871:31121-31140 | Msa1360000:intron | 25.0% |
| !! | ATATGATTTTCCTCAAGTTT+TGG | - | tig0016871:31180-31199 | Msa1360000:intron | 25.0% |
| !!! | GCTCTATTTTATTTGTTTCT+AGG | - | tig0016871:31214-31233 | Msa1360000:intron | 25.0% |
| !!! | TTTTTTGAGGGGAATTAAAA+TGG | - | tig0016871:31632-31651 | Msa1360000:intron | 25.0% |
| ! | CTGTATATTATGGTGATTTA+TGG | + | tig0016871:31792-31811 | None:intergenic | 25.0% |
| ! | ATACAGTCATATAGTATCTT+TGG | - | tig0016871:31806-31825 | Msa1360000:intron | 25.0% |
| ! | TAATCGATCTAAAAACAAGA+CGG | + | tig0016871:31860-31879 | None:intergenic | 25.0% |
| !! | GTTACTGAATAAGATTTTGT+TGG | - | tig0016871:32013-32032 | Msa1360000:intron | 25.0% |
| ! | GTTTATAAATCTCATCTCAT+CGG | - | tig0016871:32053-32072 | Msa1360000:intron | 25.0% |
| !!! | AGTAGTTAAATTTTAGGTGT+TGG | + | tig0016871:32440-32459 | None:intergenic | 25.0% |
| ! | GATCTTTAATCAATAAAGGA+TGG | + | tig0016871:32478-32497 | None:intergenic | 25.0% |
| ! | CAGAGATAAATATGTATGTA+AGG | + | tig0016871:32700-32719 | None:intergenic | 25.0% |
| ! | TCAATAAACGAAATCATATC+AGG | + | tig0016871:32858-32877 | None:intergenic | 25.0% |
| ! | TCAAGTATTCAGCATAAATA+CGG | + | tig0016871:32989-33008 | None:intergenic | 25.0% |
| !!! | CTCTACACTAACTTTTATTT+GGG | + | tig0016871:33101-33120 | None:intergenic | 25.0% |
| !! | ACTCTACACTAACTTTTATT+TGG | + | tig0016871:33102-33121 | None:intergenic | 25.0% |
| !!! | TAGTTTGTGTTTTTAAATCG+GGG | - | tig0016871:33143-33162 | Msa1360000:intron | 25.0% |
| ! | TATGTAGTGTTTATTGATCT+TGG | - | tig0016871:33617-33636 | Msa1360000:intron | 25.0% |
| !! | ATACTTTAAAAGCTGGTAAA+TGG | - | tig0016871:33729-33748 | Msa1360000:intron | 25.0% |
| !! | AAAATTATTCACTAGTTTGC+TGG | - | tig0016871:33973-33992 | Msa1360000:intron | 25.0% |
| ! | TAAATTTATGGAGAAGAGAA+TGG | + | tig0016871:30260-30279 | None:intergenic | 25.0% |
| ! | AAATTGGATGAGGATATAAT+TGG | - | tig0016871:30630-30649 | Msa1360000:CDS | 25.0% |
| !!! | CAATGTCTTTAGGATATAAT+TGG | - | tig0016871:30667-30686 | Msa1360000:intron | 25.0% |
| ! | AACTCATATTCAGAATCTTA+GGG | + | tig0016871:30721-30740 | None:intergenic | 25.0% |
| ! | AAACTCATATTCAGAATCTT+AGG | + | tig0016871:30722-30741 | None:intergenic | 25.0% |
| !!! | CCGTTTTTTTTTTTTTGAAC+AGG | - | tig0016871:30776-30795 | Msa1360000:intron | 25.0% |
| !! | CAAAGAGTGCAATTTAAAAA+CGG | + | tig0016871:30811-30830 | None:intergenic | 25.0% |
| ! | CAAACAGAAAAACATTAAAC+TGG | + | tig0016871:31014-31033 | None:intergenic | 25.0% |
| !! | TTAATGTTTTTCTGTTTGCA+AGG | - | tig0016871:31016-31035 | Msa1360000:intron | 25.0% |
| !! | TACTACTGTTTTGTGAAAAT+TGG | - | tig0016871:31067-31086 | Msa1360000:intron | 25.0% |
| ! | TTTATATAACAGTTGTCGAA+AGG | - | tig0016871:31096-31115 | Msa1360000:intron | 25.0% |
| ! | CCATTTAAAAAATTGTCCAT+TGG | + | tig0016871:31124-31143 | None:intergenic | 25.0% |
| !!! | CCAATGGACAATTTTTTAAA+TGG | - | tig0016871:31121-31140 | Msa1360000:intron | 25.0% |
| !! | ATATGATTTTCCTCAAGTTT+TGG | - | tig0016871:31180-31199 | Msa1360000:intron | 25.0% |
| !!! | GCTCTATTTTATTTGTTTCT+AGG | - | tig0016871:31214-31233 | Msa1360000:intron | 25.0% |
| !!! | TTTTTTGAGGGGAATTAAAA+TGG | - | tig0016871:31632-31651 | Msa1360000:intron | 25.0% |
| ! | CTGTATATTATGGTGATTTA+TGG | + | tig0016871:31792-31811 | None:intergenic | 25.0% |
| ! | ATACAGTCATATAGTATCTT+TGG | - | tig0016871:31806-31825 | Msa1360000:intron | 25.0% |
| ! | TAATCGATCTAAAAACAAGA+CGG | + | tig0016871:31860-31879 | None:intergenic | 25.0% |
| !! | GTTACTGAATAAGATTTTGT+TGG | - | tig0016871:32013-32032 | Msa1360000:intron | 25.0% |
| ! | GTTTATAAATCTCATCTCAT+CGG | - | tig0016871:32053-32072 | Msa1360000:intron | 25.0% |
| !!! | AGTAGTTAAATTTTAGGTGT+TGG | + | tig0016871:32440-32459 | None:intergenic | 25.0% |
| ! | GATCTTTAATCAATAAAGGA+TGG | + | tig0016871:32478-32497 | None:intergenic | 25.0% |
| ! | CAGAGATAAATATGTATGTA+AGG | + | tig0016871:32700-32719 | None:intergenic | 25.0% |
| ! | TCAATAAACGAAATCATATC+AGG | + | tig0016871:32858-32877 | None:intergenic | 25.0% |
| ! | TCAAGTATTCAGCATAAATA+CGG | + | tig0016871:32989-33008 | None:intergenic | 25.0% |
| !!! | CTCTACACTAACTTTTATTT+GGG | + | tig0016871:33101-33120 | None:intergenic | 25.0% |
| !! | ACTCTACACTAACTTTTATT+TGG | + | tig0016871:33102-33121 | None:intergenic | 25.0% |
| !!! | TAGTTTGTGTTTTTAAATCG+GGG | - | tig0016871:33143-33162 | Msa1360000:intron | 25.0% |
| ! | TATGTAGTGTTTATTGATCT+TGG | - | tig0016871:33617-33636 | Msa1360000:intron | 25.0% |
| !! | ATACTTTAAAAGCTGGTAAA+TGG | - | tig0016871:33729-33748 | Msa1360000:intron | 25.0% |
| !! | AAAATTATTCACTAGTTTGC+TGG | - | tig0016871:33973-33992 | Msa1360000:intron | 25.0% |
| TTATTCACTTACTTACAGGA+TGG | + | tig0016871:30231-30250 | None:intergenic | 30.0% | |
| TGGTTTATTCACTTACTTAC+AGG | + | tig0016871:30235-30254 | None:intergenic | 30.0% | |
| CAATTCTTCTTCAGTTCAAT+CGG | - | tig0016871:30352-30371 | Msa1360000:three_prime_UTR | 30.0% | |
| AAATTGCAGATCTGAAAAGA+AGG | + | tig0016871:30395-30414 | None:intergenic | 30.0% | |
| AATTGGAATCAATTCGTTGT+CGG | - | tig0016871:30600-30619 | Msa1360000:CDS | 30.0% | |
| ! | TAGATGTTTTACTTAGCTTC+AGG | - | tig0016871:30906-30925 | Msa1360000:intron | 30.0% |
| ! | AACAAATAAAATAGAGCGCT+TGG | + | tig0016871:31211-31230 | None:intergenic | 30.0% |
| !!! | TTTTATTTGTTTCTAGGGCA+TGG | - | tig0016871:31220-31239 | Msa1360000:intron | 30.0% |
| !!! | ATGTCGACAAATTTTTTCCA+TGG | - | tig0016871:31557-31576 | Msa1360000:intron | 30.0% |
| ! | ACGATCAGTATATCTTTTCA+GGG | - | tig0016871:31711-31730 | Msa1360000:intron | 30.0% |
| TCATATGGTATGTTATGGTT+GGG | + | tig0016871:31768-31787 | None:intergenic | 30.0% | |
| ATCATATGGTATGTTATGGT+TGG | + | tig0016871:31769-31788 | None:intergenic | 30.0% | |
| ATGGATCATATGGTATGTTA+TGG | + | tig0016871:31773-31792 | None:intergenic | 30.0% | |
| ATGGTGATTTATGGATCATA+TGG | + | tig0016871:31783-31802 | None:intergenic | 30.0% | |
| TGTTTAGGCTTACTAGATTA+CGG | - | tig0016871:31955-31974 | Msa1360000:intron | 30.0% | |
| AATAACAGATAAGAACCAGA+TGG | + | tig0016871:32187-32206 | None:intergenic | 30.0% | |
| CATTGTATCATTAAGAACCT+TGG | + | tig0016871:32267-32286 | None:intergenic | 30.0% | |
| ATGTAAACAAGCTATGCTTT+AGG | - | tig0016871:32284-32303 | Msa1360000:CDS | 30.0% | |
| !!! | ATTTTAGGTGTTGGAATGTT+TGG | + | tig0016871:32431-32450 | None:intergenic | 30.0% |
| ATTAATTACAACCAGTTTGC+AGG | + | tig0016871:32654-32673 | None:intergenic | 30.0% | |
| GATAAATATGTATGTAAGGC+AGG | + | tig0016871:32696-32715 | None:intergenic | 30.0% | |
| AAGTATTCAGCATAAATACG+GGG | + | tig0016871:32987-33006 | None:intergenic | 30.0% | |
| CAAGTATTCAGCATAAATAC+GGG | + | tig0016871:32988-33007 | None:intergenic | 30.0% | |
| !! | CACACCGTAAAGATTTTAAT+GGG | - | tig0016871:33306-33325 | Msa1360000:intron | 30.0% |
| !! | ACACCGTAAAGATTTTAATG+GGG | - | tig0016871:33307-33326 | Msa1360000:intron | 30.0% |
| ACACCCCATTAAAATCTTTA+CGG | + | tig0016871:33313-33332 | None:intergenic | 30.0% | |
| !! | AGATTTTAATGGGGTGTTTT+CGG | - | tig0016871:33316-33335 | Msa1360000:intron | 30.0% |
| !! | TTAATTTTAACAGACAGCAG+AGG | + | tig0016871:33362-33381 | None:intergenic | 30.0% |
| AGAACACCAAGCTATTTATT+GGG | + | tig0016871:33456-33475 | None:intergenic | 30.0% | |
| AACTCAAATAAATCCCAGAT+GGG | + | tig0016871:33521-33540 | None:intergenic | 30.0% | |
| AGTAAAATCATATGCAATGG+TGG | + | tig0016871:33656-33675 | None:intergenic | 30.0% | |
| ! | TGACCAAAATTAGATTAGCT+AGG | - | tig0016871:33865-33884 | Msa1360000:intron | 30.0% |
| ! | CTTCCTAGCTAATCTAATTT+TGG | + | tig0016871:33871-33890 | None:intergenic | 30.0% |
| ! | CAAAATTAGATTAGCTAGGA+AGG | - | tig0016871:33869-33888 | Msa1360000:intron | 30.0% |
| ATGTGATTCTAAACAGAAGA+GGG | + | tig0016871:34058-34077 | None:intergenic | 30.0% | |
| TTATTCACTTACTTACAGGA+TGG | + | tig0016871:30231-30250 | None:intergenic | 30.0% | |
| TGGTTTATTCACTTACTTAC+AGG | + | tig0016871:30235-30254 | None:intergenic | 30.0% | |
| CAATTCTTCTTCAGTTCAAT+CGG | - | tig0016871:30352-30371 | Msa1360000:three_prime_UTR | 30.0% | |
| AAATTGCAGATCTGAAAAGA+AGG | + | tig0016871:30395-30414 | None:intergenic | 30.0% | |
| AATTGGAATCAATTCGTTGT+CGG | - | tig0016871:30600-30619 | Msa1360000:CDS | 30.0% | |
| ! | TAGATGTTTTACTTAGCTTC+AGG | - | tig0016871:30906-30925 | Msa1360000:intron | 30.0% |
| ! | AACAAATAAAATAGAGCGCT+TGG | + | tig0016871:31211-31230 | None:intergenic | 30.0% |
| !!! | TTTTATTTGTTTCTAGGGCA+TGG | - | tig0016871:31220-31239 | Msa1360000:intron | 30.0% |
| !!! | ATGTCGACAAATTTTTTCCA+TGG | - | tig0016871:31557-31576 | Msa1360000:intron | 30.0% |
| ! | ACGATCAGTATATCTTTTCA+GGG | - | tig0016871:31711-31730 | Msa1360000:intron | 30.0% |
| TCATATGGTATGTTATGGTT+GGG | + | tig0016871:31768-31787 | None:intergenic | 30.0% | |
| ATCATATGGTATGTTATGGT+TGG | + | tig0016871:31769-31788 | None:intergenic | 30.0% | |
| ATGGATCATATGGTATGTTA+TGG | + | tig0016871:31773-31792 | None:intergenic | 30.0% | |
| ATGGTGATTTATGGATCATA+TGG | + | tig0016871:31783-31802 | None:intergenic | 30.0% | |
| TGTTTAGGCTTACTAGATTA+CGG | - | tig0016871:31955-31974 | Msa1360000:intron | 30.0% | |
| AATAACAGATAAGAACCAGA+TGG | + | tig0016871:32187-32206 | None:intergenic | 30.0% | |
| CATTGTATCATTAAGAACCT+TGG | + | tig0016871:32267-32286 | None:intergenic | 30.0% | |
| ATGTAAACAAGCTATGCTTT+AGG | - | tig0016871:32284-32303 | Msa1360000:CDS | 30.0% | |
| !!! | ATTTTAGGTGTTGGAATGTT+TGG | + | tig0016871:32431-32450 | None:intergenic | 30.0% |
| ATTAATTACAACCAGTTTGC+AGG | + | tig0016871:32654-32673 | None:intergenic | 30.0% | |
| GATAAATATGTATGTAAGGC+AGG | + | tig0016871:32696-32715 | None:intergenic | 30.0% | |
| AAGTATTCAGCATAAATACG+GGG | + | tig0016871:32987-33006 | None:intergenic | 30.0% | |
| CAAGTATTCAGCATAAATAC+GGG | + | tig0016871:32988-33007 | None:intergenic | 30.0% | |
| !! | CACACCGTAAAGATTTTAAT+GGG | - | tig0016871:33306-33325 | Msa1360000:intron | 30.0% |
| !! | ACACCGTAAAGATTTTAATG+GGG | - | tig0016871:33307-33326 | Msa1360000:intron | 30.0% |
| ACACCCCATTAAAATCTTTA+CGG | + | tig0016871:33313-33332 | None:intergenic | 30.0% | |
| !! | AGATTTTAATGGGGTGTTTT+CGG | - | tig0016871:33316-33335 | Msa1360000:intron | 30.0% |
| !! | TTAATTTTAACAGACAGCAG+AGG | + | tig0016871:33362-33381 | None:intergenic | 30.0% |
| AGAACACCAAGCTATTTATT+GGG | + | tig0016871:33456-33475 | None:intergenic | 30.0% | |
| AACTCAAATAAATCCCAGAT+GGG | + | tig0016871:33521-33540 | None:intergenic | 30.0% | |
| AGTAAAATCATATGCAATGG+TGG | + | tig0016871:33656-33675 | None:intergenic | 30.0% | |
| ! | TGACCAAAATTAGATTAGCT+AGG | - | tig0016871:33865-33884 | Msa1360000:intron | 30.0% |
| ! | CTTCCTAGCTAATCTAATTT+TGG | + | tig0016871:33871-33890 | None:intergenic | 30.0% |
| ! | CAAAATTAGATTAGCTAGGA+AGG | - | tig0016871:33869-33888 | Msa1360000:intron | 30.0% |
| ATGTGATTCTAAACAGAAGA+GGG | + | tig0016871:34058-34077 | None:intergenic | 30.0% | |
| TTATGGAGAAGAGAATGGTT+TGG | + | tig0016871:30255-30274 | None:intergenic | 35.0% | |
| AGGTTAAATTATGGATCCCA+TGG | - | tig0016871:30458-30477 | Msa1360000:three_prime_UTR | 35.0% | |
| ! | ATAGTTTGTATCGTGTTGCT+TGG | - | tig0016871:30575-30594 | Msa1360000:CDS | 35.0% |
| !! | TATCGTGTTGCTTGGAAAAT+TGG | - | tig0016871:30583-30602 | Msa1360000:CDS | 35.0% |
| TAATTGGAAAATTGGAGCCT+TGG | - | tig0016871:30683-30702 | Msa1360000:intron | 35.0% | |
| AGTTAACTAAGACATGTTGG+CGG | + | tig0016871:30974-30993 | None:intergenic | 35.0% | |
| TGCAGTTAACTAAGACATGT+TGG | + | tig0016871:30977-30996 | None:intergenic | 35.0% | |
| ACATGTCTTAGTTAACTGCA+TGG | - | tig0016871:30977-30996 | Msa1360000:intron | 35.0% | |
| !! | TGATTTTCCTCAAGTTTTGG+TGG | - | tig0016871:31183-31202 | Msa1360000:intron | 35.0% |
| CTATCATGTTTCAAGCAACT+AGG | + | tig0016871:31525-31544 | None:intergenic | 35.0% | |
| ! | CACGATCAGTATATCTTTTC+AGG | - | tig0016871:31710-31729 | Msa1360000:intron | 35.0% |
| !!! | TGTTTTTAGATCGATTACGC+CGG | - | tig0016871:31863-31882 | Msa1360000:intron | 35.0% |
| TATCGCCAAAGATACTACTA+TGG | + | tig0016871:31889-31908 | None:intergenic | 35.0% | |
| !!! | GGTTTCAATTTTGACTACGA+AGG | + | tig0016871:32368-32387 | None:intergenic | 35.0% |
| ! | ATTTTATGGTCTGGGAAACA+GGG | + | tig0016871:32528-32547 | None:intergenic | 35.0% |
| GCAGGAAAAGTTGAATAACA+GGG | + | tig0016871:32636-32655 | None:intergenic | 35.0% | |
| TGCAGGAAAAGTTGAATAAC+AGG | + | tig0016871:32637-32656 | None:intergenic | 35.0% | |
| ! | ATTCAACTTTTCCTGCAAAC+TGG | - | tig0016871:32640-32659 | Msa1360000:intron | 35.0% |
| ! | TTGATTTTCACATTTTCCCC+AGG | - | tig0016871:32874-32893 | Msa1360000:intron | 35.0% |
| ! | GCACACCGTAAAGATTTTAA+TGG | - | tig0016871:33305-33324 | Msa1360000:intron | 35.0% |
| AAACTCCCCAATAAATAGCT+TGG | - | tig0016871:33447-33466 | Msa1360000:intron | 35.0% | |
| GAACACCAAGCTATTTATTG+GGG | + | tig0016871:33455-33474 | None:intergenic | 35.0% | |
| CAGAACACCAAGCTATTTAT+TGG | + | tig0016871:33457-33476 | None:intergenic | 35.0% | |
| TTCTGTAGTTATGAGGAATG+AGG | - | tig0016871:33472-33491 | Msa1360000:intron | 35.0% | |
| GAACTCAAATAAATCCCAGA+TGG | + | tig0016871:33522-33541 | None:intergenic | 35.0% | |
| ! | CAGCAAGATACTTTAAAAGC+TGG | - | tig0016871:33722-33741 | Msa1360000:intron | 35.0% |
| AAGCATTAGCAGAACAACAA+AGG | - | tig0016871:33780-33799 | Msa1360000:intron | 35.0% | |
| !! | ATCTAATTTTGGTCACCATC+TGG | + | tig0016871:33860-33879 | None:intergenic | 35.0% |
| CATGTGATTCTAAACAGAAG+AGG | + | tig0016871:34059-34078 | None:intergenic | 35.0% | |
| TAGTGTGTAGAAGATCCAAA+AGG | + | tig0016871:34097-34116 | None:intergenic | 35.0% | |
| AACAGAAATAAACGGAACGA+TGG | + | tig0016871:34161-34180 | None:intergenic | 35.0% | |
| TTATGGAGAAGAGAATGGTT+TGG | + | tig0016871:30255-30274 | None:intergenic | 35.0% | |
| AGGTTAAATTATGGATCCCA+TGG | - | tig0016871:30458-30477 | Msa1360000:three_prime_UTR | 35.0% | |
| ! | ATAGTTTGTATCGTGTTGCT+TGG | - | tig0016871:30575-30594 | Msa1360000:CDS | 35.0% |
| !! | TATCGTGTTGCTTGGAAAAT+TGG | - | tig0016871:30583-30602 | Msa1360000:CDS | 35.0% |
| TAATTGGAAAATTGGAGCCT+TGG | - | tig0016871:30683-30702 | Msa1360000:intron | 35.0% | |
| AGTTAACTAAGACATGTTGG+CGG | + | tig0016871:30974-30993 | None:intergenic | 35.0% | |
| TGCAGTTAACTAAGACATGT+TGG | + | tig0016871:30977-30996 | None:intergenic | 35.0% | |
| ACATGTCTTAGTTAACTGCA+TGG | - | tig0016871:30977-30996 | Msa1360000:intron | 35.0% | |
| !! | TGATTTTCCTCAAGTTTTGG+TGG | - | tig0016871:31183-31202 | Msa1360000:intron | 35.0% |
| CTATCATGTTTCAAGCAACT+AGG | + | tig0016871:31525-31544 | None:intergenic | 35.0% | |
| ! | CACGATCAGTATATCTTTTC+AGG | - | tig0016871:31710-31729 | Msa1360000:intron | 35.0% |
| !!! | TGTTTTTAGATCGATTACGC+CGG | - | tig0016871:31863-31882 | Msa1360000:intron | 35.0% |
| TATCGCCAAAGATACTACTA+TGG | + | tig0016871:31889-31908 | None:intergenic | 35.0% | |
| !!! | GGTTTCAATTTTGACTACGA+AGG | + | tig0016871:32368-32387 | None:intergenic | 35.0% |
| ! | ATTTTATGGTCTGGGAAACA+GGG | + | tig0016871:32528-32547 | None:intergenic | 35.0% |
| GCAGGAAAAGTTGAATAACA+GGG | + | tig0016871:32636-32655 | None:intergenic | 35.0% | |
| TGCAGGAAAAGTTGAATAAC+AGG | + | tig0016871:32637-32656 | None:intergenic | 35.0% | |
| ! | ATTCAACTTTTCCTGCAAAC+TGG | - | tig0016871:32640-32659 | Msa1360000:intron | 35.0% |
| ! | TTGATTTTCACATTTTCCCC+AGG | - | tig0016871:32874-32893 | Msa1360000:intron | 35.0% |
| ! | GCACACCGTAAAGATTTTAA+TGG | - | tig0016871:33305-33324 | Msa1360000:intron | 35.0% |
| AAACTCCCCAATAAATAGCT+TGG | - | tig0016871:33447-33466 | Msa1360000:intron | 35.0% | |
| GAACACCAAGCTATTTATTG+GGG | + | tig0016871:33455-33474 | None:intergenic | 35.0% | |
| CAGAACACCAAGCTATTTAT+TGG | + | tig0016871:33457-33476 | None:intergenic | 35.0% | |
| TTCTGTAGTTATGAGGAATG+AGG | - | tig0016871:33472-33491 | Msa1360000:intron | 35.0% | |
| GAACTCAAATAAATCCCAGA+TGG | + | tig0016871:33522-33541 | None:intergenic | 35.0% | |
| ! | CAGCAAGATACTTTAAAAGC+TGG | - | tig0016871:33722-33741 | Msa1360000:intron | 35.0% |
| AAGCATTAGCAGAACAACAA+AGG | - | tig0016871:33780-33799 | Msa1360000:intron | 35.0% | |
| !! | ATCTAATTTTGGTCACCATC+TGG | + | tig0016871:33860-33879 | None:intergenic | 35.0% |
| CATGTGATTCTAAACAGAAG+AGG | + | tig0016871:34059-34078 | None:intergenic | 35.0% | |
| TAGTGTGTAGAAGATCCAAA+AGG | + | tig0016871:34097-34116 | None:intergenic | 35.0% | |
| AACAGAAATAAACGGAACGA+TGG | + | tig0016871:34161-34180 | None:intergenic | 35.0% | |
| GCAGATCTGAAAAGAAGGAA+GGG | + | tig0016871:30390-30409 | None:intergenic | 40.0% | |
| TGCAGATCTGAAAAGAAGGA+AGG | + | tig0016871:30391-30410 | None:intergenic | 40.0% | |
| GATTTGCCAACGATATCCAT+GGG | + | tig0016871:30477-30496 | None:intergenic | 40.0% | |
| GATGGATAGCTTAAGTCGTT+AGG | + | tig0016871:30857-30876 | None:intergenic | 40.0% | |
| GCACTCGATCAATAGATCTT+GGG | + | tig0016871:31344-31363 | None:intergenic | 40.0% | |
| AGCACTCGATCAATAGATCT+TGG | + | tig0016871:31345-31364 | None:intergenic | 40.0% | |
| GGGAATTAAAATGGTTGCTG+TGG | - | tig0016871:31641-31660 | Msa1360000:intron | 40.0% | |
| CTCTCTGCTACATACTTCAT+TGG | + | tig0016871:32082-32101 | None:intergenic | 40.0% | |
| CAATGAAGTATGTAGCAGAG+AGG | - | tig0016871:32080-32099 | Msa1360000:intron | 40.0% | |
| TATGTAGCAGAGAGGACAAA+AGG | - | tig0016871:32088-32107 | Msa1360000:intron | 40.0% | |
| TCAAATGGGACCATACATCT+TGG | - | tig0016871:32225-32244 | Msa1360000:intron | 40.0% | |
| CAAATGGGACCATACATCTT+GGG | - | tig0016871:32226-32245 | Msa1360000:intron | 40.0% | |
| ATAACAGTGCCCAAGATGTA+TGG | + | tig0016871:32238-32257 | None:intergenic | 40.0% | |
| ! | ATCTTGGGCACTGTTATGTT+TGG | - | tig0016871:32241-32260 | Msa1360000:intron | 40.0% |
| ACCGTAACTGATGTGAAAGA+AGG | - | tig0016871:32334-32353 | Msa1360000:intron | 40.0% | |
| GCCTTCTTTCACATCAGTTA+CGG | + | tig0016871:32338-32357 | None:intergenic | 40.0% | |
| ! | CATTTTATGGTCTGGGAAAC+AGG | + | tig0016871:32529-32548 | None:intergenic | 40.0% |
| ! | GTGCACACATTTTATGGTCT+GGG | + | tig0016871:32536-32555 | None:intergenic | 40.0% |
| ! | AGTGCACACATTTTATGGTC+TGG | + | tig0016871:32537-32556 | None:intergenic | 40.0% |
| ! | TCGTGAGTGCACACATTTTA+TGG | + | tig0016871:32542-32561 | None:intergenic | 40.0% |
| GAATCATCAATAAGCTCTGC+AGG | + | tig0016871:33199-33218 | None:intergenic | 40.0% | |
| CTATACGACACCAATTCCTA+AGG | + | tig0016871:33281-33300 | None:intergenic | 40.0% | |
| !! | CTTGGTGTTCTGTAGTTATG+AGG | - | tig0016871:33465-33484 | Msa1360000:intron | 40.0% |
| TTGCACAAAGATAACCCATC+TGG | - | tig0016871:33504-33523 | Msa1360000:intron | 40.0% | |
| TGCACAAAGATAACCCATCT+GGG | - | tig0016871:33505-33524 | Msa1360000:intron | 40.0% | |
| ! | ATTTGAGTTCACGAGTGTTC+TGG | - | tig0016871:33532-33551 | Msa1360000:intron | 40.0% |
| GAACTCTCATTGACATTGTG+TGG | - | tig0016871:33567-33586 | Msa1360000:intron | 40.0% | |
| TGTGGCTATTGAGAGACAAT+AGG | - | tig0016871:33585-33604 | Msa1360000:intron | 40.0% | |
| GTGGCTATTGAGAGACAATA+GGG | - | tig0016871:33586-33605 | Msa1360000:intron | 40.0% | |
| AAAGCTGGTAAATGGAGCAA+TGG | - | tig0016871:33737-33756 | Msa1360000:intron | 40.0% | |
| ACAACAAAGGATGTTTGCAG+AGG | - | tig0016871:33793-33812 | Msa1360000:intron | 40.0% | |
| TATGTGCTCCAATATAGCAG+AGG | + | tig0016871:33900-33919 | None:intergenic | 40.0% | |
| TCTGCTATATTGGAGCACAT+AGG | - | tig0016871:33899-33918 | Msa1360000:CDS | 40.0% | |
| TTGTACACAATTGAGCTCAC+AGG | + | tig0016871:33954-33973 | None:intergenic | 40.0% | |
| GCAGATCTGAAAAGAAGGAA+GGG | + | tig0016871:30390-30409 | None:intergenic | 40.0% | |
| TGCAGATCTGAAAAGAAGGA+AGG | + | tig0016871:30391-30410 | None:intergenic | 40.0% | |
| GATTTGCCAACGATATCCAT+GGG | + | tig0016871:30477-30496 | None:intergenic | 40.0% | |
| GATGGATAGCTTAAGTCGTT+AGG | + | tig0016871:30857-30876 | None:intergenic | 40.0% | |
| GCACTCGATCAATAGATCTT+GGG | + | tig0016871:31344-31363 | None:intergenic | 40.0% | |
| AGCACTCGATCAATAGATCT+TGG | + | tig0016871:31345-31364 | None:intergenic | 40.0% | |
| GGGAATTAAAATGGTTGCTG+TGG | - | tig0016871:31641-31660 | Msa1360000:intron | 40.0% | |
| CTCTCTGCTACATACTTCAT+TGG | + | tig0016871:32082-32101 | None:intergenic | 40.0% | |
| CAATGAAGTATGTAGCAGAG+AGG | - | tig0016871:32080-32099 | Msa1360000:intron | 40.0% | |
| TATGTAGCAGAGAGGACAAA+AGG | - | tig0016871:32088-32107 | Msa1360000:intron | 40.0% | |
| TCAAATGGGACCATACATCT+TGG | - | tig0016871:32225-32244 | Msa1360000:intron | 40.0% | |
| CAAATGGGACCATACATCTT+GGG | - | tig0016871:32226-32245 | Msa1360000:intron | 40.0% | |
| ATAACAGTGCCCAAGATGTA+TGG | + | tig0016871:32238-32257 | None:intergenic | 40.0% | |
| ! | ATCTTGGGCACTGTTATGTT+TGG | - | tig0016871:32241-32260 | Msa1360000:intron | 40.0% |
| ACCGTAACTGATGTGAAAGA+AGG | - | tig0016871:32334-32353 | Msa1360000:intron | 40.0% | |
| GCCTTCTTTCACATCAGTTA+CGG | + | tig0016871:32338-32357 | None:intergenic | 40.0% | |
| ! | CATTTTATGGTCTGGGAAAC+AGG | + | tig0016871:32529-32548 | None:intergenic | 40.0% |
| ! | GTGCACACATTTTATGGTCT+GGG | + | tig0016871:32536-32555 | None:intergenic | 40.0% |
| ! | AGTGCACACATTTTATGGTC+TGG | + | tig0016871:32537-32556 | None:intergenic | 40.0% |
| ! | TCGTGAGTGCACACATTTTA+TGG | + | tig0016871:32542-32561 | None:intergenic | 40.0% |
| GAATCATCAATAAGCTCTGC+AGG | + | tig0016871:33199-33218 | None:intergenic | 40.0% | |
| CTATACGACACCAATTCCTA+AGG | + | tig0016871:33281-33300 | None:intergenic | 40.0% | |
| !! | CTTGGTGTTCTGTAGTTATG+AGG | - | tig0016871:33465-33484 | Msa1360000:intron | 40.0% |
| TTGCACAAAGATAACCCATC+TGG | - | tig0016871:33504-33523 | Msa1360000:intron | 40.0% | |
| TGCACAAAGATAACCCATCT+GGG | - | tig0016871:33505-33524 | Msa1360000:intron | 40.0% | |
| ! | ATTTGAGTTCACGAGTGTTC+TGG | - | tig0016871:33532-33551 | Msa1360000:intron | 40.0% |
| GAACTCTCATTGACATTGTG+TGG | - | tig0016871:33567-33586 | Msa1360000:intron | 40.0% | |
| TGTGGCTATTGAGAGACAAT+AGG | - | tig0016871:33585-33604 | Msa1360000:intron | 40.0% | |
| GTGGCTATTGAGAGACAATA+GGG | - | tig0016871:33586-33605 | Msa1360000:intron | 40.0% | |
| AAAGCTGGTAAATGGAGCAA+TGG | - | tig0016871:33737-33756 | Msa1360000:intron | 40.0% | |
| ACAACAAAGGATGTTTGCAG+AGG | - | tig0016871:33793-33812 | Msa1360000:intron | 40.0% | |
| TATGTGCTCCAATATAGCAG+AGG | + | tig0016871:33900-33919 | None:intergenic | 40.0% | |
| TCTGCTATATTGGAGCACAT+AGG | - | tig0016871:33899-33918 | Msa1360000:CDS | 40.0% | |
| TTGTACACAATTGAGCTCAC+AGG | + | tig0016871:33954-33973 | None:intergenic | 40.0% | |
| ATGGATCCCATGGATATCGT+TGG | - | tig0016871:30468-30487 | Msa1360000:three_prime_UTR | 45.0% | |
| CGATTTGCCAACGATATCCA+TGG | + | tig0016871:30478-30497 | None:intergenic | 45.0% | |
| GGATATCGTTGGCAAATCGA+AGG | - | tig0016871:30479-30498 | Msa1360000:three_prime_UTR | 45.0% | |
| CGTTGTCGGCGTTGTTAAAT+TGG | - | tig0016871:30614-30633 | Msa1360000:CDS | 45.0% | |
| CGGCGTTGTTAAATTGGATG+AGG | - | tig0016871:30620-30639 | Msa1360000:CDS | 45.0% | |
| ! | AGACATGTTGGCGGATGTTT+AGG | + | tig0016871:30965-30984 | None:intergenic | 45.0% |
| CAGTTGTCGAAAGGAACCAA+TGG | - | tig0016871:31105-31124 | Msa1360000:intron | 45.0% | |
| ! | CTATTGATCGAGTGCTGTGT+AGG | - | tig0016871:31349-31368 | Msa1360000:intron | 45.0% |
| TGCTGTGGCCTAGTGATATT+TGG | - | tig0016871:31656-31675 | Msa1360000:intron | 45.0% | |
| GCCAAAGATACTACTATGGC+CGG | + | tig0016871:31885-31904 | None:intergenic | 45.0% | |
| AGCATACGAACAACACAAGC+TGG | - | tig0016871:32934-32953 | Msa1360000:intron | 45.0% | |
| ATGATAAACAGACCGCGTTG+AGG | - | tig0016871:33169-33188 | Msa1360000:intron | 45.0% | |
| TGATAAACAGACCGCGTTGA+GGG | - | tig0016871:33170-33189 | Msa1360000:intron | 45.0% | |
| !!! | GGGAAAAGTGACGGATTTTG+AGG | + | tig0016871:33235-33254 | None:intergenic | 45.0% |
| !!! | ATCTGGCTGTTTTGGAGCAA+TGG | + | tig0016871:33843-33862 | None:intergenic | 45.0% |
| ATTGCTCCAAAACAGCCAGA+TGG | - | tig0016871:33842-33861 | Msa1360000:intron | 45.0% | |
| TGCTCCAATATAGCAGAGGT+CGG | + | tig0016871:33896-33915 | None:intergenic | 45.0% | |
| GCTATATTGGAGCACATAGG+AGG | - | tig0016871:33902-33921 | Msa1360000:CDS | 45.0% | |
| AATTGAGCTCACAGGAAGCA+CGG | + | tig0016871:33946-33965 | None:intergenic | 45.0% | |
| ! | AATGGAGAGCACATCCACAT+TGG | + | tig0016871:33999-34018 | None:intergenic | 45.0% |
| ATGGATCCCATGGATATCGT+TGG | - | tig0016871:30468-30487 | Msa1360000:three_prime_UTR | 45.0% | |
| CGATTTGCCAACGATATCCA+TGG | + | tig0016871:30478-30497 | None:intergenic | 45.0% | |
| GGATATCGTTGGCAAATCGA+AGG | - | tig0016871:30479-30498 | Msa1360000:three_prime_UTR | 45.0% | |
| CGTTGTCGGCGTTGTTAAAT+TGG | - | tig0016871:30614-30633 | Msa1360000:CDS | 45.0% | |
| CGGCGTTGTTAAATTGGATG+AGG | - | tig0016871:30620-30639 | Msa1360000:CDS | 45.0% | |
| ! | AGACATGTTGGCGGATGTTT+AGG | + | tig0016871:30965-30984 | None:intergenic | 45.0% |
| CAGTTGTCGAAAGGAACCAA+TGG | - | tig0016871:31105-31124 | Msa1360000:intron | 45.0% | |
| ! | CTATTGATCGAGTGCTGTGT+AGG | - | tig0016871:31349-31368 | Msa1360000:intron | 45.0% |
| TGCTGTGGCCTAGTGATATT+TGG | - | tig0016871:31656-31675 | Msa1360000:intron | 45.0% | |
| GCCAAAGATACTACTATGGC+CGG | + | tig0016871:31885-31904 | None:intergenic | 45.0% | |
| AGCATACGAACAACACAAGC+TGG | - | tig0016871:32934-32953 | Msa1360000:intron | 45.0% | |
| ATGATAAACAGACCGCGTTG+AGG | - | tig0016871:33169-33188 | Msa1360000:intron | 45.0% | |
| TGATAAACAGACCGCGTTGA+GGG | - | tig0016871:33170-33189 | Msa1360000:intron | 45.0% | |
| !!! | GGGAAAAGTGACGGATTTTG+AGG | + | tig0016871:33235-33254 | None:intergenic | 45.0% |
| !!! | ATCTGGCTGTTTTGGAGCAA+TGG | + | tig0016871:33843-33862 | None:intergenic | 45.0% |
| ATTGCTCCAAAACAGCCAGA+TGG | - | tig0016871:33842-33861 | Msa1360000:intron | 45.0% | |
| TGCTCCAATATAGCAGAGGT+CGG | + | tig0016871:33896-33915 | None:intergenic | 45.0% | |
| GCTATATTGGAGCACATAGG+AGG | - | tig0016871:33902-33921 | Msa1360000:CDS | 45.0% | |
| AATTGAGCTCACAGGAAGCA+CGG | + | tig0016871:33946-33965 | None:intergenic | 45.0% | |
| ! | AATGGAGAGCACATCCACAT+TGG | + | tig0016871:33999-34018 | None:intergenic | 45.0% |
| GGTGAAGACATGGTTGGGTT+GGG | + | tig0016871:30291-30310 | None:intergenic | 50.0% | |
| CAGAGGGTGAAGACATGGTT+GGG | + | tig0016871:30296-30315 | None:intergenic | 50.0% | |
| GAGATGCGTGAAGACGAAGA+CGG | + | tig0016871:30333-30352 | None:intergenic | 50.0% | |
| GAAGATGCTTCGCTTCCCAA+AGG | - | tig0016871:30501-30520 | Msa1360000:exon | 50.0% | |
| ! | CGAGAGAGAAGCGTACCTTT+GGG | + | tig0016871:30519-30538 | None:intergenic | 50.0% |
| ! | TCGAGAGAGAAGCGTACCTT+TGG | + | tig0016871:30520-30539 | None:intergenic | 50.0% |
| TTCAGAATCTTAGGGCAGCC+TGG | + | tig0016871:30713-30732 | None:intergenic | 50.0% | |
| !! | CTTGGTGCCACCAAAACTTG+AGG | + | tig0016871:31193-31212 | None:intergenic | 50.0% |
| GCCGGCCATAGTAGTATCTT+TGG | - | tig0016871:31881-31900 | Msa1360000:intron | 50.0% | |
| AGAGCCTTCAATACGTGCTC+AGG | + | tig0016871:32123-32142 | None:intergenic | 50.0% | |
| GCACGTATTGAAGGCTCTAC+AGG | - | tig0016871:32125-32144 | Msa1360000:intron | 50.0% | |
| CAGATGGCTGTGCAGAACTT+TGG | + | tig0016871:32171-32190 | None:intergenic | 50.0% | |
| CAAAGTTCTGCACAGCCATC+TGG | - | tig0016871:32169-32188 | Msa1360000:intron | 50.0% | |
| GGCACTGTTATGTTTGGCCA+AGG | - | tig0016871:32247-32266 | Msa1360000:intron | 50.0% | |
| CAGGACGAGGTAATATCTCG+TGG | + | tig0016871:32566-32585 | None:intergenic | 50.0% | |
| TGCTATTGTGCTTCAGGACG+AGG | + | tig0016871:32579-32598 | None:intergenic | 50.0% | |
| TCCTGAAGCACAATAGCAGC+TGG | - | tig0016871:32581-32600 | Msa1360000:intron | 50.0% | |
| ! | TCACATTTTCCCCAGGTGCT+TGG | - | tig0016871:32881-32900 | Msa1360000:intron | 50.0% |
| TTTCCCCAGGTGCTTGGATT+TGG | - | tig0016871:32887-32906 | Msa1360000:intron | 50.0% | |
| ACAACACAAGCTGGAGACCA+TGG | - | tig0016871:32943-32962 | Msa1360000:intron | 50.0% | |
| GATAAACAGACCGCGTTGAG+GGG | - | tig0016871:33171-33190 | Msa1360000:intron | 50.0% | |
| CTAAGGTCTCCACGTCGTTT+GGG | + | tig0016871:33264-33283 | None:intergenic | 50.0% | |
| GACGTGGAGACCTTAGGAAT+TGG | - | tig0016871:33268-33287 | Msa1360000:intron | 50.0% | |
| !! | TTAATGGGGTGTTTTCGGCG+TGG | - | tig0016871:33321-33340 | Msa1360000:intron | 50.0% |
| CAATGGAGCTGAGATGACTG+AGG | - | tig0016871:33754-33773 | Msa1360000:intron | 50.0% | |
| ! | TGGTCACCATCTGGCTGTTT+TGG | + | tig0016871:33851-33870 | None:intergenic | 50.0% |
| AGGACCGACCTCTGCTATAT+TGG | - | tig0016871:33889-33908 | Msa1360000:CDS | 50.0% | |
| !! | CACTAGTTTGCTGGCCAATG+TGG | - | tig0016871:33982-34001 | Msa1360000:intron | 50.0% |
| GGTGAAGACATGGTTGGGTT+GGG | + | tig0016871:30291-30310 | None:intergenic | 50.0% | |
| CAGAGGGTGAAGACATGGTT+GGG | + | tig0016871:30296-30315 | None:intergenic | 50.0% | |
| GAGATGCGTGAAGACGAAGA+CGG | + | tig0016871:30333-30352 | None:intergenic | 50.0% | |
| GAAGATGCTTCGCTTCCCAA+AGG | - | tig0016871:30501-30520 | Msa1360000:exon | 50.0% | |
| ! | CGAGAGAGAAGCGTACCTTT+GGG | + | tig0016871:30519-30538 | None:intergenic | 50.0% |
| ! | TCGAGAGAGAAGCGTACCTT+TGG | + | tig0016871:30520-30539 | None:intergenic | 50.0% |
| TTCAGAATCTTAGGGCAGCC+TGG | + | tig0016871:30713-30732 | None:intergenic | 50.0% | |
| !! | CTTGGTGCCACCAAAACTTG+AGG | + | tig0016871:31193-31212 | None:intergenic | 50.0% |
| GCCGGCCATAGTAGTATCTT+TGG | - | tig0016871:31881-31900 | Msa1360000:intron | 50.0% | |
| AGAGCCTTCAATACGTGCTC+AGG | + | tig0016871:32123-32142 | None:intergenic | 50.0% | |
| GCACGTATTGAAGGCTCTAC+AGG | - | tig0016871:32125-32144 | Msa1360000:intron | 50.0% | |
| CAGATGGCTGTGCAGAACTT+TGG | + | tig0016871:32171-32190 | None:intergenic | 50.0% | |
| CAAAGTTCTGCACAGCCATC+TGG | - | tig0016871:32169-32188 | Msa1360000:intron | 50.0% | |
| GGCACTGTTATGTTTGGCCA+AGG | - | tig0016871:32247-32266 | Msa1360000:intron | 50.0% | |
| CAGGACGAGGTAATATCTCG+TGG | + | tig0016871:32566-32585 | None:intergenic | 50.0% | |
| TGCTATTGTGCTTCAGGACG+AGG | + | tig0016871:32579-32598 | None:intergenic | 50.0% | |
| TCCTGAAGCACAATAGCAGC+TGG | - | tig0016871:32581-32600 | Msa1360000:intron | 50.0% | |
| ! | TCACATTTTCCCCAGGTGCT+TGG | - | tig0016871:32881-32900 | Msa1360000:intron | 50.0% |
| TTTCCCCAGGTGCTTGGATT+TGG | - | tig0016871:32887-32906 | Msa1360000:intron | 50.0% | |
| ACAACACAAGCTGGAGACCA+TGG | - | tig0016871:32943-32962 | Msa1360000:intron | 50.0% | |
| GATAAACAGACCGCGTTGAG+GGG | - | tig0016871:33171-33190 | Msa1360000:intron | 50.0% | |
| CTAAGGTCTCCACGTCGTTT+GGG | + | tig0016871:33264-33283 | None:intergenic | 50.0% | |
| GACGTGGAGACCTTAGGAAT+TGG | - | tig0016871:33268-33287 | Msa1360000:intron | 50.0% | |
| !! | TTAATGGGGTGTTTTCGGCG+TGG | - | tig0016871:33321-33340 | Msa1360000:intron | 50.0% |
| CAATGGAGCTGAGATGACTG+AGG | - | tig0016871:33754-33773 | Msa1360000:intron | 50.0% | |
| ! | TGGTCACCATCTGGCTGTTT+TGG | + | tig0016871:33851-33870 | None:intergenic | 50.0% |
| AGGACCGACCTCTGCTATAT+TGG | - | tig0016871:33889-33908 | Msa1360000:CDS | 50.0% | |
| !! | CACTAGTTTGCTGGCCAATG+TGG | - | tig0016871:33982-34001 | Msa1360000:intron | 50.0% |
| AGCGAGCGAGCATACGCTTA+GGG | + | tig0016871:30184-30203 | None:intergenic | 55.0% | |
| CGCTCGCTCGCAACAAGAAT+TGG | - | tig0016871:30196-30215 | Msa1360000:three_prime_UTR | 55.0% | |
| GGGTGAAGACATGGTTGGGT+TGG | + | tig0016871:30292-30311 | None:intergenic | 55.0% | |
| GCAGAGGGTGAAGACATGGT+TGG | + | tig0016871:30297-30316 | None:intergenic | 55.0% | |
| GAAGACGAAGACGGTGAAGG+AGG | + | tig0016871:30324-30343 | None:intergenic | 55.0% | |
| CGTGAAGACGAAGACGGTGA+AGG | + | tig0016871:30327-30346 | None:intergenic | 55.0% | |
| ! | AATTGGAGCCTTGGTGCACC+AGG | - | tig0016871:30692-30711 | Msa1360000:intron | 55.0% |
| TGCGCCTGAGCACGTATTGA+AGG | - | tig0016871:32116-32135 | Msa1360000:intron | 55.0% | |
| GCCAGCTGCTATTGTGCTTC+AGG | + | tig0016871:32585-32604 | None:intergenic | 55.0% | |
| TCGCCAAATCCAAGCACCTG+GGG | + | tig0016871:32893-32912 | None:intergenic | 55.0% | |
| CTCGCCAAATCCAAGCACCT+GGG | + | tig0016871:32894-32913 | None:intergenic | 55.0% | |
| ACTCGCCAAATCCAAGCACC+TGG | + | tig0016871:32895-32914 | None:intergenic | 55.0% | |
| GGGTTAGGCGGGAAAAGTGA+CGG | + | tig0016871:33244-33263 | None:intergenic | 55.0% | |
| ! | TCCACGTCGTTTGGGTTAGG+CGG | + | tig0016871:33256-33275 | None:intergenic | 55.0% |
| ! | GTCTCCACGTCGTTTGGGTT+AGG | + | tig0016871:33259-33278 | None:intergenic | 55.0% |
| CCTAAGGTCTCCACGTCGTT+TGG | + | tig0016871:33265-33284 | None:intergenic | 55.0% | |
| CCAAACGACGTGGAGACCTT+AGG | - | tig0016871:33262-33281 | Msa1360000:intron | 55.0% | |
| GAAGCACGGACAGGAGTAAG+AGG | + | tig0016871:33932-33951 | None:intergenic | 55.0% | |
| AGCGAGCGAGCATACGCTTA+GGG | + | tig0016871:30184-30203 | None:intergenic | 55.0% | |
| CGCTCGCTCGCAACAAGAAT+TGG | - | tig0016871:30196-30215 | Msa1360000:three_prime_UTR | 55.0% | |
| GGGTGAAGACATGGTTGGGT+TGG | + | tig0016871:30292-30311 | None:intergenic | 55.0% | |
| GCAGAGGGTGAAGACATGGT+TGG | + | tig0016871:30297-30316 | None:intergenic | 55.0% | |
| GAAGACGAAGACGGTGAAGG+AGG | + | tig0016871:30324-30343 | None:intergenic | 55.0% | |
| CGTGAAGACGAAGACGGTGA+AGG | + | tig0016871:30327-30346 | None:intergenic | 55.0% | |
| ! | AATTGGAGCCTTGGTGCACC+AGG | - | tig0016871:30692-30711 | Msa1360000:intron | 55.0% |
| TGCGCCTGAGCACGTATTGA+AGG | - | tig0016871:32116-32135 | Msa1360000:intron | 55.0% | |
| GCCAGCTGCTATTGTGCTTC+AGG | + | tig0016871:32585-32604 | None:intergenic | 55.0% | |
| TCGCCAAATCCAAGCACCTG+GGG | + | tig0016871:32893-32912 | None:intergenic | 55.0% | |
| CTCGCCAAATCCAAGCACCT+GGG | + | tig0016871:32894-32913 | None:intergenic | 55.0% | |
| ACTCGCCAAATCCAAGCACC+TGG | + | tig0016871:32895-32914 | None:intergenic | 55.0% | |
| GGGTTAGGCGGGAAAAGTGA+CGG | + | tig0016871:33244-33263 | None:intergenic | 55.0% | |
| ! | TCCACGTCGTTTGGGTTAGG+CGG | + | tig0016871:33256-33275 | None:intergenic | 55.0% |
| ! | GTCTCCACGTCGTTTGGGTT+AGG | + | tig0016871:33259-33278 | None:intergenic | 55.0% |
| CCTAAGGTCTCCACGTCGTT+TGG | + | tig0016871:33265-33284 | None:intergenic | 55.0% | |
| CCAAACGACGTGGAGACCTT+AGG | - | tig0016871:33262-33281 | Msa1360000:intron | 55.0% | |
| GAAGCACGGACAGGAGTAAG+AGG | + | tig0016871:33932-33951 | None:intergenic | 55.0% | |
| GAGCGAGCGAGCATACGCTT+AGG | + | tig0016871:30185-30204 | None:intergenic | 60.0% | |
| AGGCGCAGAGGGTGAAGACA+TGG | + | tig0016871:30301-30320 | None:intergenic | 60.0% | |
| GACGAAGACGGTGAAGGAGG+AGG | + | tig0016871:30321-30340 | None:intergenic | 60.0% | |
| GTTACCGCAAGATGTCCGCG+TGG | - | tig0016871:31309-31328 | Msa1360000:intron | 60.0% | |
| ! | CCACGTCGTTTGGGTTAGGC+GGG | + | tig0016871:33255-33274 | None:intergenic | 60.0% |
| CCCACCATTCATCCTAGCGC+GGG | + | tig0016871:33819-33838 | None:intergenic | 60.0% | |
| CCCGCGCTAGGATGAATGGT+GGG | - | tig0016871:33816-33835 | Msa1360000:intron | 60.0% | |
| CCCCACCATTCATCCTAGCG+CGG | + | tig0016871:33820-33839 | None:intergenic | 60.0% | |
| CCGCGCTAGGATGAATGGTG+GGG | - | tig0016871:33817-33836 | Msa1360000:intron | 60.0% | |
| ! | AGCTCACAGGAAGCACGGAC+AGG | + | tig0016871:33941-33960 | None:intergenic | 60.0% |
| GAGCGAGCGAGCATACGCTT+AGG | + | tig0016871:30185-30204 | None:intergenic | 60.0% | |
| AGGCGCAGAGGGTGAAGACA+TGG | + | tig0016871:30301-30320 | None:intergenic | 60.0% | |
| GACGAAGACGGTGAAGGAGG+AGG | + | tig0016871:30321-30340 | None:intergenic | 60.0% | |
| GTTACCGCAAGATGTCCGCG+TGG | - | tig0016871:31309-31328 | Msa1360000:intron | 60.0% | |
| ! | CCACGTCGTTTGGGTTAGGC+GGG | + | tig0016871:33255-33274 | None:intergenic | 60.0% |
| CCCACCATTCATCCTAGCGC+GGG | + | tig0016871:33819-33838 | None:intergenic | 60.0% | |
| CCCGCGCTAGGATGAATGGT+GGG | - | tig0016871:33816-33835 | Msa1360000:intron | 60.0% | |
| CCCCACCATTCATCCTAGCG+CGG | + | tig0016871:33820-33839 | None:intergenic | 60.0% | |
| CCGCGCTAGGATGAATGGTG+GGG | - | tig0016871:33817-33836 | Msa1360000:intron | 60.0% | |
| ! | AGCTCACAGGAAGCACGGAC+AGG | + | tig0016871:33941-33960 | None:intergenic | 60.0% |
| ! | GGTGAAGGAGGAGGCGCAGA+GGG | + | tig0016871:30312-30331 | None:intergenic | 65.0% |
| TAGGGCAGCCTGGTGCACCA+AGG | + | tig0016871:30703-30722 | None:intergenic | 65.0% | |
| CTCGCCACGCGGACATCTTG+CGG | + | tig0016871:31316-31335 | None:intergenic | 65.0% | |
| CTTGGGTGTCTCTCGCCACG+CGG | + | tig0016871:31327-31346 | None:intergenic | 65.0% | |
| TCTGCAGGAGCCCCTCAACG+CGG | + | tig0016871:33184-33203 | None:intergenic | 65.0% | |
| CCCGCCTAACCCAAACGACG+TGG | - | tig0016871:33252-33271 | Msa1360000:intron | 65.0% | |
| TGTTTGCAGAGGCCCGCGCT+AGG | - | tig0016871:33804-33823 | Msa1360000:intron | 65.0% | |
| GAGGCCCGCGCTAGGATGAA+TGG | - | tig0016871:33812-33831 | Msa1360000:intron | 65.0% | |
| GCCCGCGCTAGGATGAATGG+TGG | - | tig0016871:33815-33834 | Msa1360000:intron | 65.0% | |
| ! | GGTGAAGGAGGAGGCGCAGA+GGG | + | tig0016871:30312-30331 | None:intergenic | 65.0% |
| TAGGGCAGCCTGGTGCACCA+AGG | + | tig0016871:30703-30722 | None:intergenic | 65.0% | |
| CTCGCCACGCGGACATCTTG+CGG | + | tig0016871:31316-31335 | None:intergenic | 65.0% | |
| CTTGGGTGTCTCTCGCCACG+CGG | + | tig0016871:31327-31346 | None:intergenic | 65.0% | |
| TCTGCAGGAGCCCCTCAACG+CGG | + | tig0016871:33184-33203 | None:intergenic | 65.0% | |
| CCCGCCTAACCCAAACGACG+TGG | - | tig0016871:33252-33271 | Msa1360000:intron | 65.0% | |
| TGTTTGCAGAGGCCCGCGCT+AGG | - | tig0016871:33804-33823 | Msa1360000:intron | 65.0% | |
| GAGGCCCGCGCTAGGATGAA+TGG | - | tig0016871:33812-33831 | Msa1360000:intron | 65.0% | |
| GCCCGCGCTAGGATGAATGG+TGG | - | tig0016871:33815-33834 | Msa1360000:intron | 65.0% | |
| ! | CGGTGAAGGAGGAGGCGCAG+AGG | + | tig0016871:30313-30332 | None:intergenic | 70.0% |
| ! | CGGTGAAGGAGGAGGCGCAG+AGG | + | tig0016871:30313-30332 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0016871 | gene | 30150 | 34246 | 30150 | ID=Msa1360000;Name=Msa1360000 |
| tig0016871 | mRNA | 30150 | 34246 | 30150 | ID=Msa1360000-mRNA-1;Parent=Msa1360000;Name=Msa1360000-mRNA-1;_AED=0.17;_eAED=0.17;_QI=232|0.66|0.85|1|0.66|0.85|7|369|155 |
| tig0016871 | exon | 30150 | 30671 | 30150 | ID=Msa1360000-mRNA-1:exon:11692;Parent=Msa1360000-mRNA-1 |
| tig0016871 | exon | 31432 | 31500 | 31432 | ID=Msa1360000-mRNA-1:exon:11691;Parent=Msa1360000-mRNA-1 |
| tig0016871 | exon | 32250 | 32344 | 32250 | ID=Msa1360000-mRNA-1:exon:11690;Parent=Msa1360000-mRNA-1 |
| tig0016871 | exon | 32883 | 32888 | 32883 | ID=Msa1360000-mRNA-1:exon:11689;Parent=Msa1360000-mRNA-1 |
| tig0016871 | exon | 33026 | 33115 | 33026 | ID=Msa1360000-mRNA-1:exon:11688;Parent=Msa1360000-mRNA-1 |
| tig0016871 | exon | 33874 | 33936 | 33874 | ID=Msa1360000-mRNA-1:exon:11687;Parent=Msa1360000-mRNA-1 |
| tig0016871 | exon | 34023 | 34246 | 34023 | ID=Msa1360000-mRNA-1:exon:11686;Parent=Msa1360000-mRNA-1 |
| tig0016871 | five_prime_UTR | 34023 | 34246 | 34023 | ID=Msa1360000-mRNA-1:five_prime_utr;Parent=Msa1360000-mRNA-1 |
| tig0016871 | five_prime_UTR | 33929 | 33936 | 33929 | ID=Msa1360000-mRNA-1:five_prime_utr;Parent=Msa1360000-mRNA-1 |
| tig0016871 | CDS | 33874 | 33928 | 33874 | ID=Msa1360000-mRNA-1:cds;Parent=Msa1360000-mRNA-1 |
| tig0016871 | CDS | 33026 | 33115 | 33026 | ID=Msa1360000-mRNA-1:cds;Parent=Msa1360000-mRNA-1 |
| tig0016871 | CDS | 32883 | 32888 | 32883 | ID=Msa1360000-mRNA-1:cds;Parent=Msa1360000-mRNA-1 |
| tig0016871 | CDS | 32250 | 32344 | 32250 | ID=Msa1360000-mRNA-1:cds;Parent=Msa1360000-mRNA-1 |
| tig0016871 | CDS | 31432 | 31500 | 31432 | ID=Msa1360000-mRNA-1:cds;Parent=Msa1360000-mRNA-1 |
| tig0016871 | CDS | 30519 | 30671 | 30519 | ID=Msa1360000-mRNA-1:cds;Parent=Msa1360000-mRNA-1 |
| tig0016871 | three_prime_UTR | 30150 | 30518 | 30150 | ID=Msa1360000-mRNA-1:three_prime_utr;Parent=Msa1360000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
