AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1360330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1360330 MtrunA17_Chr1g0154031 88.384 396 27 6 1 381 1 392 0.0 639
Msa1360330 MtrunA17_Chr3g0080861 39.482 309 158 7 47 336 15 313 2.15e-56 194
Msa1360330 MtrunA17_Chr8g0354661 70.161 124 37 0 73 196 37 160 3.32e-56 194
Msa1360330 MtrunA17_Chr3g0099131 70.085 117 35 0 71 187 39 155 4.15e-55 191
Msa1360330 MtrunA17_Chr2g0322521 57.419 155 60 1 39 193 1 149 6.63e-52 179
Msa1360330 MtrunA17_Chr1g0192411 47.778 180 83 3 73 241 12 191 2.59e-48 170
Msa1360330 MtrunA17_Chr5g0395281 64.486 107 38 0 70 176 9 115 2.07e-44 157
Msa1360330 MtrunA17_Chr4g0039971 63.551 107 39 0 70 176 10 116 2.71e-44 157
Msa1360330 MtrunA17_Chr7g0274581 59.048 105 43 0 72 176 11 115 8.42e-44 152
Msa1360330 MtrunA17_Chr7g0261281 62.857 105 39 0 72 176 11 115 2.98e-43 153
Msa1360330 MtrunA17_Chr1g0187761 60.952 105 41 0 72 176 11 115 3.32e-43 152
Msa1360330 MtrunA17_Chr3g0115821 60.748 107 42 0 70 176 9 115 4.50e-43 154
Msa1360330 MtrunA17_Chr5g0410961 61.682 107 41 0 70 176 9 115 4.88e-43 154
Msa1360330 MtrunA17_Chr2g0281071 61.905 105 40 0 72 176 12 116 6.73e-43 154
Msa1360330 MtrunA17_Chr8g0349261 63.208 106 38 1 72 176 12 117 8.03e-43 152
Msa1360330 MtrunA17_Chr1g0167691 60.000 105 42 0 72 176 11 115 1.37e-41 147
Msa1360330 MtrunA17_Chr7g0228231 53.906 128 46 1 48 175 2 116 1.42e-41 146
Msa1360330 MtrunA17_Chr4g0048511 60.000 105 42 0 72 176 12 116 1.74e-41 150
Msa1360330 MtrunA17_Chr5g0440781 44.000 175 84 4 74 247 13 174 2.68e-41 145
Msa1360330 MtrunA17_Chr6g0450101 62.136 103 39 0 73 175 14 116 3.45e-41 145
Msa1360330 MtrunA17_Chr1g0209661 52.632 114 54 0 65 178 19 132 5.58e-41 148
Msa1360330 MtrunA17_Chr1g0203411 59.091 110 45 0 72 181 11 120 7.33e-41 147
Msa1360330 MtrunA17_Chr5g0440761 42.286 175 87 3 74 247 13 174 7.74e-41 146
Msa1360330 MtrunA17_Chr5g0441141 42.286 175 87 3 74 247 13 174 8.27e-41 146
Msa1360330 MtrunA17_Chr7g0275911 59.048 105 43 0 72 176 11 115 9.03e-41 145
Msa1360330 MtrunA17_Chr1g0193801 62.264 106 40 0 73 178 12 117 9.68e-41 149
Msa1360330 MtrunA17_Chr1g0168661 60.000 105 42 0 74 178 22 126 1.08e-40 145
Msa1360330 MtrunA17_Chr7g0270891 62.264 106 40 0 73 178 12 117 1.14e-40 148
Msa1360330 MtrunA17_Chr8g0346561 59.633 109 44 0 72 180 11 119 1.45e-40 146
Msa1360330 MtrunA17_Chr2g0323411 60.000 105 42 0 72 176 11 115 1.83e-40 147
Msa1360330 MtrunA17_Chr4g0022911 53.333 120 56 0 72 191 12 131 2.79e-40 145
Msa1360330 MtrunA17_Chr3g0099141 69.318 88 27 0 70 157 37 124 2.79e-40 140
Msa1360330 MtrunA17_Chr1g0167661 59.048 105 43 0 72 176 11 115 3.13e-40 144
Msa1360330 MtrunA17_Chr1g0186061 55.462 119 53 0 60 178 7 125 3.42e-40 144
Msa1360330 MtrunA17_Chr1g0193371 61.321 106 41 0 73 178 12 117 3.73e-40 147
Msa1360330 MtrunA17_Chr1g0194301 57.547 106 45 0 73 178 33 138 4.92e-40 144
Msa1360330 MtrunA17_Chr4g0022901 50.000 130 63 1 70 197 10 139 4.99e-40 144
Msa1360330 MtrunA17_Chr4g0022931 47.727 132 69 0 70 201 10 141 7.65e-40 144
Msa1360330 MtrunA17_Chr4g0032401 55.752 113 50 0 64 176 8 120 1.12e-39 145
Msa1360330 MtrunA17_Chr4g0058631 60.577 104 41 0 73 176 12 115 2.37e-39 145
Msa1360330 MtrunA17_Chr3g0117091 59.615 104 42 0 73 176 12 115 3.20e-39 144
Msa1360330 MtrunA17_Chr2g0323351 57.547 106 45 0 70 175 9 114 3.54e-39 141
Msa1360330 MtrunA17_Chr4g0042671 57.143 105 45 0 72 176 11 115 3.79e-39 145
Msa1360330 MtrunA17_Chr2g0330041 58.654 104 43 0 73 176 12 115 4.55e-39 145
Msa1360330 MtrunA17_Chr3g0121241 56.190 105 46 0 72 176 41 145 7.41e-39 142
Msa1360330 MtrunA17_Chr7g0217741 56.190 105 46 0 72 176 11 115 7.44e-39 142
Msa1360330 MtrunA17_Chr1g0194291 55.963 109 48 0 70 178 18 126 7.68e-39 140
Msa1360330 MtrunA17_Chr1g0211161 57.692 104 44 0 73 176 13 116 1.34e-38 139
Msa1360330 MtrunA17_Chr4g0068061 57.143 105 45 0 72 176 11 115 1.66e-38 142
Msa1360330 MtrunA17_Chr7g0254411 59.048 105 43 0 72 176 11 115 1.85e-38 142
Msa1360330 MtrunA17_Chr2g0311221 61.616 99 38 0 73 171 14 112 1.87e-38 141
Msa1360330 MtrunA17_Chr4g0022881 53.153 111 52 0 70 180 9 119 2.68e-38 138
Msa1360330 MtrunA17_Chr8g0334881 54.386 114 51 1 66 178 3 116 3.17e-38 140
Msa1360330 MtrunA17_Chr8g0342541 56.731 104 45 0 73 176 12 115 3.84e-38 141
Msa1360330 MtrunA17_Chr3g0088461 58.654 104 43 0 73 176 22 125 4.47e-38 140
Msa1360330 MtrunA17_Chr2g0328771 57.692 104 44 0 73 176 20 123 6.06e-38 140
Msa1360330 MtrunA17_Chr7g0217221 57.143 105 45 0 72 176 11 115 6.62e-38 138
Msa1360330 MtrunA17_Chr8g0342521 57.692 104 44 0 73 176 12 115 6.97e-38 140
Msa1360330 MtrunA17_Chr7g0271241 62.245 98 37 0 73 170 12 109 7.74e-38 141
Msa1360330 MtrunA17_Chr8g0385321 59.804 102 41 0 75 176 14 115 1.25e-37 139
Msa1360330 MtrunA17_Chr4g0060721 56.190 105 46 0 72 176 12 116 1.81e-37 139
Msa1360330 MtrunA17_Chr3g0110351 56.190 105 46 0 72 176 11 115 2.16e-37 138
Msa1360330 MtrunA17_Chr4g0057031 56.190 105 46 0 72 176 11 115 2.58e-37 137
Msa1360330 MtrunA17_Chr2g0309911 55.769 104 46 0 73 176 11 114 2.93e-37 138
Msa1360330 MtrunA17_Chr6g0453211 59.000 100 41 0 72 171 11 110 3.41e-37 138
Msa1360330 MtrunA17_Chr5g0434571 55.140 107 48 0 72 178 47 153 4.79e-37 138
Msa1360330 MtrunA17_Chr6g0453471 55.238 105 47 0 72 176 11 115 5.70e-37 138
Msa1360330 MtrunA17_Chr3g0092401 56.190 105 46 0 72 176 12 116 6.57e-37 137
Msa1360330 MtrunA17_Chr8g0387421 55.660 106 47 0 73 178 12 117 7.64e-37 137
Msa1360330 MtrunA17_Chr4g0013361 54.310 116 51 2 71 185 8 122 1.05e-36 136
Msa1360330 MtrunA17_Chr7g0228891 57.143 105 45 0 72 176 11 115 1.22e-36 135
Msa1360330 MtrunA17_Chr4g0037141 56.863 102 44 0 75 176 14 115 1.33e-36 135
Msa1360330 MtrunA17_Chr5g0441131 49.593 123 61 1 74 195 10 132 1.71e-36 132
Msa1360330 MtrunA17_Chr3g0131121 58.824 102 42 0 75 176 14 115 1.82e-36 135
Msa1360330 MtrunA17_Chr4g0070611 55.238 105 47 0 72 176 11 115 1.92e-36 135
Msa1360330 MtrunA17_Chr5g0417821 57.143 105 45 0 72 176 6 110 4.45e-36 134
Msa1360330 MtrunA17_Chr4g0070641 55.238 105 47 0 72 176 11 115 7.63e-36 130
Msa1360330 MtrunA17_Chr5g0397231 57.576 99 42 0 73 171 12 110 8.21e-36 134
Msa1360330 MtrunA17_Chr1g0180391 54.717 106 48 0 71 176 17 122 1.23e-35 131
Msa1360330 MtrunA17_Chr1g0194951 56.190 105 46 0 72 176 11 115 1.82e-35 134
Msa1360330 MtrunA17_Chr5g0435101 51.923 104 50 0 73 176 11 114 3.78e-35 129
Msa1360330 MtrunA17_Chr4g0022891 45.000 140 72 2 70 209 9 143 5.35e-35 130
Msa1360330 MtrunA17_Chr6g0452271 46.043 139 74 1 73 210 12 150 6.38e-35 132
Msa1360330 MtrunA17_Chr8g0342481 54.286 105 47 1 73 176 12 116 7.72e-35 133
Msa1360330 MtrunA17_Chr2g0327821 51.887 106 51 0 73 178 6 111 8.01e-35 129
Msa1360330 MtrunA17_Chr4g0030881 50.909 110 47 1 74 176 8 117 1.27e-33 126
Msa1360330 MtrunA17_Chr2g0293911 54.128 109 50 0 70 178 21 129 1.50e-33 128
Msa1360330 MtrunA17_Chr4g0068921 56.311 103 45 0 73 175 24 126 1.90e-33 124
Msa1360330 MtrunA17_Chr4g0044421 51.961 102 49 0 75 176 14 115 2.86e-33 124
Msa1360330 MtrunA17_Chr4g0055981 46.094 128 66 2 73 199 55 180 3.41e-33 124
Msa1360330 MtrunA17_Chr1g0203441 54.369 103 47 0 74 176 14 116 3.64e-33 125
Msa1360330 MtrunA17_Chr8g0343831 51.923 104 50 0 73 176 8 111 5.96e-33 124
Msa1360330 MtrunA17_Chr3g0103281 51.923 104 50 0 73 176 12 115 1.01e-32 126
Msa1360330 MtrunA17_Chr1g0151941 49.524 105 52 1 73 176 12 116 1.19e-32 124
Msa1360330 MtrunA17_Chr1g0152011 50.926 108 52 1 70 176 9 116 1.63e-32 125
Msa1360330 MtrunA17_Chr3g0135311 39.130 161 91 2 73 232 12 166 3.41e-32 125
Msa1360330 MtrunA17_Chr4g0028311 51.852 108 51 1 73 179 12 119 5.32e-32 124
Msa1360330 MtrunA17_Chr6g0470971 51.456 103 50 0 74 176 15 117 8.23e-32 122
Msa1360330 MtrunA17_Chr7g0269831 58.095 105 44 0 72 176 11 115 1.04e-31 124
Msa1360330 MtrunA17_Chr8g0360111 51.485 101 49 0 71 171 23 123 1.58e-31 121
Msa1360330 MtrunA17_Chr7g0247131 65.333 75 26 0 105 179 10 84 2.35e-31 120
Msa1360330 MtrunA17_Chr5g0400821 50.000 108 53 1 70 176 9 116 2.48e-31 122
Msa1360330 MtrunA17_Chr2g0327351 52.427 103 48 1 70 171 9 111 2.88e-31 122
Msa1360330 MtrunA17_Chr5g0434841 51.429 105 51 0 72 176 19 123 8.67e-31 120
Msa1360330 MtrunA17_Chr4g0054391 51.961 102 48 1 70 170 9 110 8.71e-31 120
Msa1360330 MtrunA17_Chr5g0434931 47.619 105 55 0 72 176 34 138 1.61e-30 119
Msa1360330 MtrunA17_Chr5g0434911 48.571 105 54 0 72 176 20 124 3.25e-30 118
Msa1360330 MtrunA17_Chr7g0220341 47.664 107 54 1 72 176 24 130 3.37e-30 117
Msa1360330 MtrunA17_Chr7g0264641 47.222 108 56 1 70 176 9 116 3.60e-30 117
Msa1360330 MtrunA17_Chr6g0487491 48.276 116 51 2 73 179 12 127 6.70e-30 116
Msa1360330 MtrunA17_Chr5g0434831 49.524 105 53 0 72 176 6 110 8.75e-30 114
Msa1360330 MtrunA17_Chr7g0240821 48.000 100 52 0 77 176 5 104 1.40e-29 115
Msa1360330 MtrunA17_Chr4g0072751 50.485 103 50 1 70 171 9 111 1.75e-29 117
Msa1360330 MtrunA17_Chr5g0401731 51.961 102 48 1 75 176 15 115 1.35e-27 112
Msa1360330 MtrunA17_Chr7g0228991 45.714 105 57 0 72 176 28 132 1.94e-27 110
Msa1360330 MtrunA17_Chr6g0454921 50.980 102 49 1 75 176 15 115 4.41e-27 107
Msa1360330 MtrunA17_Chr4g0053431 50.000 102 50 1 75 176 5 105 8.26e-27 108
Msa1360330 MtrunA17_Chr4g0008551 50.962 104 48 2 75 177 38 139 1.10e-26 110
Msa1360330 MtrunA17_Chr2g0323321 44.444 108 52 2 72 179 10 109 1.76e-26 102
Msa1360330 MtrunA17_Chr5g0395221 55.556 81 36 0 69 149 8 88 3.47e-26 101
Msa1360330 MtrunA17_Chr4g0042611 51.948 77 37 0 73 149 12 88 6.26e-26 100
Msa1360330 MtrunA17_Chr2g0294811 53.846 78 36 0 72 149 11 88 8.07e-26 101
Msa1360330 MtrunA17_Chr7g0238631 51.923 104 49 1 73 176 111 213 8.25e-26 109
Msa1360330 MtrunA17_Chr5g0429661 47.619 105 52 2 73 176 120 222 8.57e-26 107
Msa1360330 MtrunA17_Chr6g0453751 54.348 92 33 2 72 154 19 110 1.98e-25 100
Msa1360330 MtrunA17_Chr7g0228531 40.141 142 70 4 44 180 197 328 3.08e-25 107
Msa1360330 MtrunA17_Chr5g0425591 53.659 82 37 1 74 154 10 91 3.58e-25 98.6
Msa1360330 MtrunA17_Chr3g0139671 49.038 104 52 1 73 176 83 185 3.64e-25 108
Msa1360330 MtrunA17_Chr1g0157731 48.077 104 53 1 73 176 89 191 4.37e-25 108
Msa1360330 MtrunA17_Chr4g0058991 47.619 105 52 2 73 176 207 309 5.59e-25 106
Msa1360330 MtrunA17_Chr3g0133601 46.078 102 54 1 75 176 37 137 1.42e-24 101
Msa1360330 MtrunA17_Chr8g0342511 52.632 76 36 0 73 148 12 87 4.28e-24 95.9
Msa1360330 MtrunA17_Chr3g0117511 44.248 113 57 2 75 182 183 294 5.17e-24 103
Msa1360330 MtrunA17_Chr8g0342531 48.193 83 43 0 73 155 12 94 1.34e-23 96.7
Msa1360330 MtrunA17_Chr5g0437321 52.381 105 48 2 68 171 11 114 2.75e-23 99.0
Msa1360330 MtrunA17_Chr4g0042501 39.161 143 81 3 46 184 73 213 1.05e-22 99.8
Msa1360330 MtrunA17_Chr5g0417621 45.946 111 57 2 75 184 134 242 1.52e-22 99.4
Msa1360330 MtrunA17_Chr6g0480581 42.857 112 63 1 75 186 4 114 1.77e-22 95.9
Msa1360330 MtrunA17_Chr7g0228481 45.946 111 53 4 75 180 220 328 2.47e-22 98.6
Msa1360330 MtrunA17_Chr3g0125801 43.307 127 64 3 75 195 16 140 8.09e-22 95.1
Msa1360330 MtrunA17_Chr8g0342461 49.383 81 40 1 73 152 12 92 1.35e-21 90.5
Msa1360330 MtrunA17_Chr7g0228401 42.727 110 62 1 86 195 290 398 1.56e-21 96.7
Msa1360330 MtrunA17_Chr8g0342471 49.367 79 39 1 73 150 12 90 3.26e-21 89.4
Msa1360330 MtrunA17_Chr5g0397841 46.939 98 51 1 73 170 108 204 3.09e-20 92.8
Msa1360330 MtrunA17_Chr7g0254261 43.636 110 61 1 75 184 89 197 6.43e-20 90.5
Msa1360330 MtrunA17_Chr1g0193901 59.524 84 32 2 73 154 11 94 6.87e-20 84.7
Msa1360330 MtrunA17_Chr1g0193891 59.524 84 32 2 73 154 11 94 6.87e-20 84.7
Msa1360330 MtrunA17_Chr1g0193871 59.524 84 32 2 73 154 11 94 6.87e-20 84.7
Msa1360330 MtrunA17_Chr1g0193881 59.524 84 32 2 73 154 11 94 6.87e-20 84.7
Msa1360330 MtrunA17_Chr7g0238651 42.718 103 57 1 78 178 10 112 3.36e-19 88.6
Msa1360330 MtrunA17_Chr1g0177901 48.276 87 44 1 85 171 4 89 7.21e-19 84.7
Msa1360330 MtrunA17_Chr6g0460671 35.606 132 81 2 47 178 74 201 8.25e-19 87.4
Msa1360330 MtrunA17_Chr7g0229101 48.571 70 36 0 105 174 4 73 1.41e-18 84.0
Msa1360330 MtrunA17_Chr6g0460661 38.462 104 63 1 75 178 16 118 1.71e-18 82.4
Msa1360330 MtrunA17_Chr3g0093811 50.000 72 36 0 105 176 14 85 9.36e-18 82.8
Msa1360330 MtrunA17_Chr7g0229131 47.887 71 37 0 105 175 4 74 9.95e-18 80.5
Msa1360330 MtrunA17_Chr7g0233061 43.299 97 52 2 75 171 180 273 1.72e-17 83.6
Msa1360330 MtrunA17_Chr5g0434901 47.059 68 36 0 107 174 7 74 1.86e-17 78.2
Msa1360330 MtrunA17_Chr5g0416341 36.634 101 63 1 78 178 29 128 9.32e-17 82.0
Msa1360330 MtrunA17_Chr8g0362231 34.615 104 67 1 78 181 25 127 1.84e-15 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1360330 AT4G26930.1 71.318 129 37 0 61 189 7 135 8.27e-61 202
Msa1360330 AT3G11440.2 41.639 305 137 9 68 337 36 334 6.82e-59 200
Msa1360330 AT2G32460.1 65.672 134 45 1 61 193 5 138 2.59e-58 199
Msa1360330 AT3G11440.3 41.639 305 137 9 68 337 36 334 5.16e-58 199
Msa1360330 AT3G11440.4 41.639 305 137 9 68 337 36 334 5.16e-58 199
Msa1360330 AT3G11440.1 41.639 305 137 9 68 337 36 334 5.16e-58 199
Msa1360330 AT5G06100.1 40.367 327 161 10 39 337 1 321 1.28e-57 196
Msa1360330 AT2G32460.2 68.033 122 39 0 72 193 5 126 5.52e-57 195
Msa1360330 AT5G06100.5 40.367 327 161 10 39 337 1 321 7.66e-57 196
Msa1360330 AT5G06100.2 40.367 327 161 10 39 337 1 321 7.66e-57 196
Msa1360330 AT5G06100.3 40.367 327 161 10 39 337 1 321 7.66e-57 196
Msa1360330 AT5G06100.4 40.367 327 161 10 39 337 1 321 7.66e-57 196
Msa1360330 AT5G55020.1 71.074 121 33 1 70 188 21 141 1.51e-55 192
Msa1360330 AT2G26960.1 53.125 160 69 1 73 226 20 179 1.41e-53 184
Msa1360330 AT3G61250.1 63.810 105 38 0 72 176 11 115 1.09e-44 157
Msa1360330 AT4G21440.1 61.682 107 41 0 70 176 9 115 1.76e-43 155
Msa1360330 AT5G16770.4 60.748 107 42 0 70 176 9 115 5.93e-43 154
Msa1360330 AT5G16770.3 60.748 107 42 0 70 176 9 115 5.93e-43 154
Msa1360330 AT5G10280.1 60.748 107 42 0 70 176 9 115 7.58e-43 154
Msa1360330 AT5G16770.1 60.748 107 42 0 70 176 9 115 1.32e-42 153
Msa1360330 AT5G16770.2 60.748 107 42 0 70 176 9 115 1.32e-42 153
Msa1360330 AT3G01530.1 49.645 141 64 2 70 207 22 158 2.08e-42 149
Msa1360330 AT3G02940.2 59.813 107 43 0 70 176 9 115 2.83e-42 151
Msa1360330 AT3G02940.1 59.813 107 43 0 70 176 9 115 4.69e-42 151
Msa1360330 AT3G02940.3 59.813 107 43 0 70 176 9 115 4.69e-42 151
Msa1360330 AT2G31180.1 58.182 110 46 0 72 181 11 120 5.09e-42 149
Msa1360330 AT5G40350.1 61.165 103 40 0 73 175 17 119 1.07e-41 147
Msa1360330 AT3G27810.1 59.813 107 43 0 69 175 16 122 1.31e-41 147
Msa1360330 AT1G68320.1 57.547 106 45 0 73 178 19 124 6.10e-41 147
Msa1360330 AT3G24310.1 60.000 110 44 0 70 179 15 124 1.09e-40 146
Msa1360330 AT4G05100.1 58.879 107 44 0 70 176 10 116 1.25e-40 147
Msa1360330 AT1G79180.1 56.780 118 46 1 73 185 14 131 1.45e-40 146
Msa1360330 AT1G09540.1 60.577 104 41 0 73 176 12 115 1.74e-40 148
Msa1360330 AT4G28110.1 57.944 107 45 0 70 176 9 115 2.01e-40 145
Msa1360330 AT5G65230.1 57.009 107 46 0 70 176 9 115 2.07e-40 146
Msa1360330 AT3G13540.1 58.095 105 44 0 72 176 22 126 4.06e-40 144
Msa1360330 AT3G30210.1 57.798 109 46 0 72 180 26 134 5.03e-40 144
Msa1360330 AT3G23250.1 47.887 142 74 0 72 213 11 152 5.34e-40 145
Msa1360330 AT4G13480.1 60.952 105 41 0 74 178 7 111 9.01e-40 143
Msa1360330 AT1G06180.1 59.048 105 43 0 72 176 11 115 1.83e-39 142
Msa1360330 AT4G01680.3 61.321 106 41 0 73 178 12 117 1.85e-39 142
Msa1360330 AT5G54230.1 58.654 104 43 0 73 176 12 115 2.33e-39 144
Msa1360330 AT1G34670.1 57.009 107 46 0 70 176 9 115 2.80e-39 145
Msa1360330 AT5G60890.1 58.879 107 44 0 70 176 9 115 2.93e-39 143
Msa1360330 AT4G01680.1 61.321 106 41 0 73 178 12 117 3.91e-39 144
Msa1360330 AT1G57560.1 59.615 104 42 0 73 176 12 115 4.10e-39 143
Msa1360330 AT1G57560.2 59.615 104 42 0 73 176 12 115 4.27e-39 142
Msa1360330 AT5G26660.1 59.434 106 43 0 73 178 12 117 4.90e-39 144
Msa1360330 AT3G13890.2 58.654 104 43 0 73 176 12 115 5.23e-39 144
Msa1360330 AT1G08810.1 60.000 105 42 0 72 176 11 115 5.65e-39 142
Msa1360330 AT1G18570.1 59.813 107 43 0 70 176 10 116 8.99e-39 143
Msa1360330 AT3G01140.2 57.009 107 46 0 70 176 9 115 9.61e-39 143
Msa1360330 AT3G01140.1 57.009 107 46 0 70 176 52 158 2.01e-38 143
Msa1360330 AT5G15310.1 57.143 105 45 0 72 176 11 115 2.05e-38 142
Msa1360330 AT5G15310.2 57.143 105 45 0 72 176 11 115 2.26e-38 141
Msa1360330 AT5G15310.4 57.143 105 45 0 72 176 11 115 3.75e-38 139
Msa1360330 AT1G22640.1 57.692 104 44 0 73 176 12 115 3.93e-38 139
Msa1360330 AT3G12720.1 56.481 108 47 0 69 176 18 125 4.16e-38 140
Msa1360330 AT1G16490.1 50.400 125 62 0 73 197 14 138 5.57e-38 139
Msa1360330 AT1G66230.1 56.075 107 47 0 72 178 11 117 6.31e-38 139
Msa1360330 AT5G12870.1 58.654 104 43 0 73 176 18 121 7.87e-38 139
Msa1360330 AT4G38620.1 59.804 102 41 0 75 176 14 115 8.18e-38 139
Msa1360330 AT1G56160.1 56.731 104 45 0 73 176 14 117 9.41e-38 139
Msa1360330 AT4G17785.2 57.143 105 45 0 72 176 12 116 1.09e-37 140
Msa1360330 AT4G17785.1 57.143 105 45 0 72 176 12 116 1.13e-37 140
Msa1360330 AT1G25340.1 52.679 112 51 1 67 178 14 123 1.23e-37 138
Msa1360330 AT2G47460.1 49.231 130 64 1 72 199 11 140 1.76e-37 140
Msa1360330 AT3G28910.1 56.075 107 47 0 70 176 9 115 1.98e-37 139
Msa1360330 AT5G07700.1 56.190 105 46 0 72 176 11 115 2.24e-37 139
Msa1360330 AT5G07700.2 56.190 105 46 0 72 176 11 115 2.24e-37 139
Msa1360330 AT2G16720.1 57.692 104 44 0 73 176 12 115 2.28e-37 137
Msa1360330 AT5G62470.2 57.143 105 45 0 72 176 11 115 2.80e-37 139
Msa1360330 AT5G61420.2 56.190 105 46 0 72 176 11 115 2.85e-37 139
Msa1360330 AT2G47190.1 47.727 132 61 1 47 178 2 125 3.50e-37 137
Msa1360330 AT3G47600.1 57.143 105 45 0 72 176 11 115 3.54e-37 138
Msa1360330 AT5G14750.1 50.000 114 57 0 63 176 6 119 3.89e-37 134
Msa1360330 AT3G08500.1 53.097 113 53 0 64 176 21 133 5.27e-37 138
Msa1360330 AT5G07690.1 56.731 104 45 0 72 175 11 114 5.40e-37 138
Msa1360330 AT5G16600.1 55.140 107 48 0 72 178 11 117 8.49e-37 137
Msa1360330 AT1G74650.1 57.692 104 44 0 73 176 12 115 8.79e-37 137
Msa1360330 AT1G48000.1 53.774 106 49 0 73 178 32 137 9.72e-37 135
Msa1360330 AT1G35515.1 55.769 104 46 0 73 176 12 115 1.05e-36 134
Msa1360330 AT4G09460.1 57.843 102 43 0 75 176 14 115 1.07e-36 134
Msa1360330 AT4G22680.1 55.238 105 47 0 72 176 11 115 1.31e-36 135
Msa1360330 AT5G49330.1 57.143 105 45 0 72 176 11 115 1.39e-36 137
Msa1360330 AT5G40330.1 36.842 209 111 5 67 274 6 194 1.56e-36 134
Msa1360330 AT3G46130.1 51.282 117 56 1 70 185 6 122 1.81e-36 134
Msa1360330 AT1G74080.1 58.654 104 43 0 72 175 11 114 2.61e-36 136
Msa1360330 AT3G60460.1 52.212 113 53 1 67 178 5 117 2.95e-36 135
Msa1360330 AT1G63910.1 55.660 106 47 0 73 178 12 117 3.26e-36 137
Msa1360330 AT3G13890.1 53.982 113 43 1 73 176 12 124 4.13e-36 136
Msa1360330 AT5G59780.3 54.286 105 48 0 74 178 9 113 5.48e-36 132
Msa1360330 AT4G01680.2 55.085 118 41 1 73 178 12 129 6.67e-36 135
Msa1360330 AT4G34990.1 56.863 102 44 0 75 176 14 115 8.47e-36 133
Msa1360330 AT5G62470.1 57.143 105 44 1 72 176 11 114 8.87e-36 135
Msa1360330 AT3G62610.1 55.238 105 47 0 72 176 11 115 8.96e-36 135
Msa1360330 AT1G18710.1 48.855 131 65 2 72 200 11 141 3.09e-35 131
Msa1360330 AT1G74430.1 54.286 105 48 0 72 176 11 115 3.51e-35 131
Msa1360330 AT4G12350.1 54.808 104 47 0 73 176 12 115 4.12e-35 132
Msa1360330 AT3G06490.1 56.881 109 47 0 70 178 16 124 5.09e-35 132
Msa1360330 AT5G52600.1 45.902 122 66 0 67 188 6 127 5.13e-35 129
Msa1360330 AT5G14340.1 55.140 107 48 0 72 178 23 129 5.26e-35 131
Msa1360330 AT4G37780.1 53.774 106 48 1 72 176 11 116 5.29e-35 132
Msa1360330 AT3G27920.1 53.398 103 48 0 74 176 15 117 5.30e-35 130
Msa1360330 AT2G26950.1 48.760 121 62 0 73 193 16 136 6.65e-35 133
Msa1360330 AT3G12820.1 57.692 104 44 0 73 176 14 117 6.84e-35 130
Msa1360330 AT1G79180.2 44.371 151 46 2 73 185 14 164 3.93e-34 130
Msa1360330 AT5G35550.1 52.885 104 49 0 73 176 14 117 1.01e-33 127
Msa1360330 AT5G62320.1 51.754 114 48 1 70 176 10 123 1.85e-33 126
Msa1360330 AT5G49620.1 54.128 109 50 0 70 178 23 131 2.00e-33 127
Msa1360330 AT3G48920.1 53.922 102 47 0 74 175 19 120 2.22e-33 126
Msa1360330 AT1G25340.2 50.000 112 49 2 67 178 14 118 2.71e-33 126
Msa1360330 AT1G25340.3 50.000 112 49 2 67 178 14 118 4.96e-33 127
Msa1360330 AT5G57620.1 51.852 108 51 1 70 176 9 116 5.94e-33 127
Msa1360330 AT3G28470.1 52.941 102 48 0 70 171 9 110 2.05e-32 125
Msa1360330 AT5G56110.1 50.962 104 51 0 73 176 12 115 2.78e-32 125
Msa1360330 AT3G53200.1 52.336 107 51 0 73 179 9 115 8.58e-32 121
Msa1360330 AT3G49690.1 50.926 108 52 1 70 176 9 116 9.46e-32 123
Msa1360330 AT5G23000.1 52.381 105 49 1 73 176 12 116 1.63e-31 123
Msa1360330 AT1G66370.1 49.524 105 53 0 72 176 7 111 4.69e-31 119
Msa1360330 AT4G25560.1 51.456 103 50 0 74 176 11 113 8.85e-31 120
Msa1360330 AT5G65790.1 50.000 108 53 1 70 176 9 116 2.05e-30 121
Msa1360330 AT5G49620.2 47.967 123 50 1 70 178 23 145 6.10e-30 118
Msa1360330 AT2G36890.1 48.673 113 57 1 70 181 9 121 2.04e-29 116
Msa1360330 AT5G52260.1 44.882 127 70 0 63 189 2 128 2.52e-29 115
Msa1360330 AT5G26660.2 67.123 73 24 0 106 178 14 86 2.70e-29 117
Msa1360330 AT2G36890.2 48.673 113 57 1 70 181 50 162 2.92e-29 117
Msa1360330 AT1G56650.1 48.182 110 57 0 67 176 2 111 6.17e-29 114
Msa1360330 AT3G27810.2 68.571 70 22 0 106 175 4 73 8.89e-29 111
Msa1360330 AT5G40350.2 67.143 70 23 0 106 175 5 74 2.25e-28 110
Msa1360330 AT1G66380.1 47.273 110 58 0 67 176 2 111 9.50e-28 107
Msa1360330 AT4G18770.1 45.455 121 60 2 67 182 209 328 1.04e-27 114
Msa1360330 AT1G66390.1 47.273 110 58 0 67 176 2 111 1.56e-27 110
Msa1360330 AT3G09370.2 51.923 104 49 1 73 176 133 235 1.05e-26 112
Msa1360330 AT3G09370.1 51.923 104 49 1 73 176 128 230 1.27e-26 112
Msa1360330 AT5G02320.1 49.565 115 52 2 73 182 125 238 1.44e-26 112
Msa1360330 AT5G02320.2 49.565 115 52 2 73 182 125 238 1.44e-26 112
Msa1360330 AT5G02320.3 49.565 115 52 2 73 182 65 178 1.46e-26 112
Msa1360330 AT3G09370.3 51.923 104 49 1 73 176 141 243 1.61e-26 112
Msa1360330 AT5G58850.1 49.524 105 50 2 73 176 103 205 1.92e-26 110
Msa1360330 AT3G46130.3 54.118 85 38 1 102 185 6 90 4.02e-26 105
Msa1360330 AT3G50060.1 44.954 109 59 1 75 183 6 113 9.40e-26 106
Msa1360330 AT5G59780.2 54.762 84 36 1 95 178 11 92 1.69e-25 103
Msa1360330 AT3G46130.4 52.174 92 41 2 95 185 11 100 1.84e-25 104
Msa1360330 AT5G40360.1 37.423 163 86 3 73 220 156 317 2.15e-25 107
Msa1360330 AT5G11050.1 48.544 103 50 2 75 176 105 205 2.75e-25 107
Msa1360330 AT3G12820.2 66.176 68 23 0 109 176 2 69 5.13e-25 101
Msa1360330 AT2G23290.1 50.000 102 50 1 75 176 13 113 5.17e-25 104
Msa1360330 AT5G11510.3 47.115 104 54 1 73 176 79 181 7.08e-25 108
Msa1360330 AT5G11510.3 36.082 97 60 2 75 170 29 124 8.89e-11 64.7
Msa1360330 AT5G11510.1 47.115 104 54 1 73 176 79 181 7.08e-25 108
Msa1360330 AT5G11510.1 36.082 97 60 2 75 170 29 124 8.89e-11 64.7
Msa1360330 AT5G11510.4 47.115 104 54 1 73 176 79 181 7.08e-25 108
Msa1360330 AT5G11510.4 36.082 97 60 2 75 170 29 124 8.89e-11 64.7
Msa1360330 AT4G37260.1 49.020 102 51 1 75 176 13 113 7.15e-25 104
Msa1360330 AT5G11510.2 47.115 104 54 1 73 176 79 181 1.09e-24 107
Msa1360330 AT1G69560.2 41.304 138 74 3 46 178 90 225 1.12e-24 104
Msa1360330 AT5G11510.5 47.115 104 54 1 73 176 79 181 1.12e-24 107
Msa1360330 AT5G35550.2 60.563 71 28 0 106 176 50 120 1.23e-24 102
Msa1360330 AT3G55730.1 49.515 103 49 2 75 176 56 156 1.41e-24 105
Msa1360330 AT1G69560.1 42.424 132 69 3 52 178 80 209 1.59e-24 103
Msa1360330 AT3G09230.1 48.039 102 52 1 75 176 55 155 2.90e-24 104
Msa1360330 AT4G32730.5 47.115 104 54 1 73 176 85 187 3.38e-24 106
Msa1360330 AT4G32730.4 47.115 104 54 1 73 176 85 187 3.38e-24 106
Msa1360330 AT4G32730.3 47.115 104 54 1 73 176 85 187 3.38e-24 106
Msa1360330 AT4G32730.2 47.115 104 54 1 73 176 85 187 3.38e-24 106
Msa1360330 AT4G32730.1 47.115 104 54 1 73 176 85 187 3.72e-24 105
Msa1360330 AT1G17950.1 43.103 116 63 2 75 189 5 118 5.76e-24 100
Msa1360330 AT3G27785.1 44.860 107 58 1 70 176 184 289 1.53e-23 102
Msa1360330 AT5G67300.1 48.039 102 52 1 75 176 6 106 1.66e-23 100
Msa1360330 AT2G39880.1 41.600 125 70 2 53 176 28 150 2.60e-23 100
Msa1360330 AT3G53200.2 58.108 74 31 0 106 179 9 82 4.24e-23 97.1
Msa1360330 AT1G26780.1 46.018 113 58 2 73 184 96 206 4.87e-23 98.6
Msa1360330 AT1G26780.2 46.018 113 58 2 73 184 96 206 5.65e-23 100
Msa1360330 AT4G33450.1 43.519 108 60 1 74 181 18 124 6.04e-23 97.8
Msa1360330 AT5G14750.3 50.633 79 34 1 103 176 7 85 9.15e-23 95.1
Msa1360330 AT3G29020.1 40.870 115 67 1 75 189 65 178 2.52e-22 95.5
Msa1360330 AT3G29020.2 40.870 115 67 1 75 189 67 180 2.99e-22 97.1
Msa1360330 AT3G47600.2 56.338 71 31 0 106 176 39 109 3.37e-22 97.1
Msa1360330 AT5G17800.1 41.353 133 66 3 75 196 93 224 4.42e-22 96.7
Msa1360330 AT4G00540.2 38.824 170 82 5 73 226 101 264 2.10e-21 95.9
Msa1360330 AT4G00540.1 38.824 170 82 5 73 226 99 262 3.28e-21 95.9
Msa1360330 AT1G73410.1 46.667 105 53 2 75 178 6 108 5.97e-21 92.0
Msa1360330 AT1G73410.2 46.667 105 53 2 75 178 6 108 1.64e-20 89.7
Msa1360330 AT2G25230.1 42.735 117 58 5 73 183 24 137 7.79e-19 85.5
Msa1360330 AT2G37630.1 36.765 136 80 2 78 207 7 142 1.30e-17 84.3
Msa1360330 AT3G23250.2 42.553 94 54 0 120 213 2 95 1.46e-17 82.0
Msa1360330 AT1G66380.3 47.887 71 37 0 106 176 8 78 1.95e-17 78.2
Msa1360330 AT1G66380.2 49.275 69 35 0 67 135 2 70 4.46e-17 77.0
Msa1360330 AT1G22640.3 59.649 57 23 0 120 176 2 58 4.58e-17 79.7
Msa1360330 AT1G18960.1 40.000 105 54 3 75 176 10 108 2.01e-16 80.1
Msa1360330 AT2G02820.2 31.200 125 83 2 78 202 33 154 2.35e-16 81.3
Msa1360330 AT2G02820.1 31.200 125 83 2 78 202 33 154 2.46e-16 81.3
Msa1360330 AT2G02820.3 31.200 125 83 2 78 202 33 154 2.50e-16 80.1
Msa1360330 AT1G14350.2 34.653 101 65 1 78 178 28 127 4.17e-16 80.5
Msa1360330 AT1G14350.1 34.653 101 65 1 78 178 28 127 4.17e-16 80.5
Msa1360330 AT5G40430.1 30.435 184 111 6 73 246 52 228 2.40e-15 76.3
Msa1360330 AT5G14750.4 46.552 58 31 0 119 176 1 58 7.00e-14 68.9
Msa1360330 AT5G14750.2 46.552 58 31 0 119 176 1 58 7.00e-14 68.9
Msa1360330 AT5G39700.1 38.542 96 58 1 76 171 57 151 1.05e-13 69.7
Msa1360330 AT5G59780.1 56.250 48 21 0 131 178 1 48 3.42e-13 67.8
Msa1360330 AT3G46130.2 51.786 56 26 1 131 185 1 56 3.74e-13 68.2
Msa1360330 AT4G25560.2 56.522 46 20 0 131 176 2 47 3.11e-12 66.2
Msa1360330 AT1G71030.2 41.538 65 38 0 112 176 5 69 3.17e-12 65.5
Msa1360330 AT1G71030.1 41.538 65 38 0 112 176 19 83 4.22e-12 65.5
Msa1360330 AT1G14350.3 40.323 62 37 0 117 178 23 84 5.10e-11 64.7
Msa1360330 AT1G14350.4 40.323 62 37 0 117 178 23 84 5.10e-11 64.7

Find 105 sgRNAs with CRISPR-Local

Find 236 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATAAGATTGGAAATAAA+TGG 0.185312 tig0017059:+7792 Msa1360330:CDS
TGACTCCTTTCTAGAGAAAT+TGG 0.220809 tig0017059:-10150 None:intergenic
AGTCTTCATGAACCCATATA+TGG 0.244427 tig0017059:-10073 None:intergenic
AAACATGGTGGTAAAATATC+TGG 0.257423 tig0017059:-9790 None:intergenic
TGAAACGGATTGTAGCTATT+TGG 0.258205 tig0017059:-9991 None:intergenic
ATGATTCGACGTTCTTCTTC+AGG 0.268447 tig0017059:-7761 None:intergenic
ATCATGCTGGCTGGCTTCAT+TGG 0.300523 tig0017059:-9716 None:intergenic
CTCTCAGAAGAAAAGTAATC+TGG 0.306960 tig0017059:-10611 None:intergenic
ATAATGAGATAAAGAACTTT+TGG 0.307361 tig0017059:+9593 Msa1360330:CDS
CATTCAGATGATAAATCTTC+AGG 0.312305 tig0017059:-9661 None:intergenic
ACTGACTGAACAGGCTCAAC+TGG 0.349423 tig0017059:-10126 None:intergenic
ATTGAGTTGCATCATAAGAT+TGG 0.356703 tig0017059:+7782 Msa1360330:CDS
CGATCATCATCGCCGCTTGA+AGG 0.358046 tig0017059:-7488 None:intergenic
GATGATGGCGATCACAAAAT+AGG 0.362163 tig0017059:+7443 Msa1360330:CDS
TGTGCTAAGATTTGCTTCAT+TGG 0.364024 tig0017059:-10184 None:intergenic
CTTCTGAGAGAGATGATTTG+AGG 0.371667 tig0017059:+10624 Msa1360330:CDS
CTCTGCTTCATCATGCTGGC+TGG 0.372309 tig0017059:-9725 None:intergenic
TCAAATACTGCTGGGGCAGC+AGG 0.376035 tig0017059:-9907 None:intergenic
TAATCTTTAAATATCACTTC+AGG 0.379136 tig0017059:-9757 None:intergenic
AGCGCTTCAAGCGAAGATTA+TGG 0.386466 tig0017059:+7371 Msa1360330:CDS
TGGAAATAAATGGGCTCAAA+TGG 0.392012 tig0017059:+7802 Msa1360330:CDS
CAACTGGAGGATTGGAGTAT+TGG 0.399439 tig0017059:-10110 None:intergenic
CGTCTCCTTCGTCTTCTCCA+TGG 0.402216 tig0017059:+9956 Msa1360330:CDS
TGTTCTCTGCTTCATCATGC+TGG 0.404526 tig0017059:-9729 None:intergenic
GAACACAAGATGCAAGAAAC+GGG 0.408906 tig0017059:+9615 Msa1360330:CDS
CAGTTCCAATTTCTCTAGAA+AGG 0.428312 tig0017059:+10145 Msa1360330:CDS
GAGCAAGTCCGGTACACTTC+CGG 0.430508 tig0017059:-7667 None:intergenic
GTCTCCTTCGTCTTCTCCAT+GGG 0.431298 tig0017059:+9957 Msa1360330:CDS
ATCATGACCTGCCAAATAAG+AGG 0.433710 tig0017059:-10561 None:intergenic
TCAATCACAGGCGCAGCATC+TGG 0.436455 tig0017059:-10665 None:intergenic
GACTTCCAAGGGCGCTTTGA+GGG 0.437235 tig0017059:-9844 None:intergenic
TCATGAATATGATAGCACTA+TGG 0.438389 tig0017059:+10011 Msa1360330:CDS
AACAGGCTCAACTGGAGGAT+TGG 0.439138 tig0017059:-10118 None:intergenic
GATAAATCTTCAGGGTAGAT+TGG 0.439548 tig0017059:-9652 None:intergenic
TCATCCTCTGCCGTTGTCCA+TGG 0.443860 tig0017059:-7593 None:intergenic
GAAATTGGAACTGACTGAAC+AGG 0.448557 tig0017059:-10135 None:intergenic
TCATAAGATTGGAAATAAAT+GGG 0.455657 tig0017059:+7793 Msa1360330:CDS
AACTGATGATCAAATACTGC+TGG 0.456239 tig0017059:-9916 None:intergenic
ATTGCACCCTTTCTGAGATC+AGG 0.458941 tig0017059:-7734 None:intergenic
TTTCCCACAGCGAGCAAGTC+CGG 0.466320 tig0017059:-7678 None:intergenic
GGAGATACCACTGGAGGAGA+AGG 0.467461 tig0017059:+7545 Msa1360330:CDS
TGCGTCCCTCAAAGCGCCCT+TGG 0.468573 tig0017059:+9839 Msa1360330:CDS
AACGGCAGAGGATGAAATCT+TGG 0.471469 tig0017059:+7601 Msa1360330:CDS
ATGGGCTCAAATGGCTGCAC+TGG 0.486850 tig0017059:+7811 Msa1360330:CDS
GTCTTCATGAACCCATATAT+GGG 0.491841 tig0017059:-10072 None:intergenic
GGAACACAAGATGCAAGAAA+CGG 0.492766 tig0017059:+9614 Msa1360330:CDS
ATCTCATTATCTGTGCGTCC+AGG 0.493581 tig0017059:-9580 None:intergenic
GTGCTATCATATTCATGAAA+CGG 0.494601 tig0017059:-10006 None:intergenic
AGGGAAATTGGAACTCTGTC+CGG 0.506939 tig0017059:+7648 Msa1360330:CDS
ATAACTGTACAAATTCATAT+CGG 0.515660 tig0017059:-9866 None:intergenic
GGACTTCCAAGGGCGCTTTG+AGG 0.516823 tig0017059:-9845 None:intergenic
AACTCTGTCCGGAAGTGTAC+CGG 0.521040 tig0017059:+7659 Msa1360330:CDS
CAAATACTGCTGGGGCAGCA+GGG 0.528905 tig0017059:-9906 None:intergenic
TCTCAGAAGAAAAGTAATCT+GGG 0.531207 tig0017059:-10610 None:intergenic
GCGGCGATGATGATCGCAAA+AGG 0.531464 tig0017059:+7495 Msa1360330:CDS
ATTCAGATGATAAATCTTCA+GGG 0.545938 tig0017059:-9660 None:intergenic
GGATTGGAGTATTGGAGTGA+AGG 0.545981 tig0017059:-10102 None:intergenic
CTGTGATTGATGACTTCGCT+TGG 0.546041 tig0017059:+10678 Msa1360330:CDS
TGTTTCGATAAGCTTCTAGC+TGG 0.546372 tig0017059:+9808 Msa1360330:CDS
GGAGAAGGTGGTCTAAAGAA+AGG 0.546935 tig0017059:+7569 Msa1360330:CDS
AACATGGTGGTAAAATATCT+GGG 0.549896 tig0017059:-9789 None:intergenic
TCATGACCTGCCAAATAAGA+GGG 0.554267 tig0017059:-10560 None:intergenic
TTCTCCTCCTTCTCCTCCAG+TGG 0.555594 tig0017059:-7552 None:intergenic
CTGAGACCTGATCTCAGAAA+GGG 0.555668 tig0017059:+7728 Msa1360330:CDS
GGAAAAGCTGTCGTCTACGA+TGG 0.558748 tig0017059:+7696 Msa1360330:CDS
TCTGAGACCTGATCTCAGAA+AGG 0.562729 tig0017059:+7727 Msa1360330:CDS
GAGTCAGATGATCAGTATGA+TGG 0.563883 tig0017059:+10216 Msa1360330:CDS
AGCGCTTCAAGCGAAGATGA+TGG 0.565732 tig0017059:+7428 Msa1360330:CDS
AGGTCCATGGACAACGGCAG+AGG 0.565835 tig0017059:+7589 Msa1360330:CDS
AATTCATATCGGACTTCCAA+GGG 0.570384 tig0017059:-9855 None:intergenic
ACTGGAGGAGAAGGAGGAGA+AGG 0.570737 tig0017059:+7554 Msa1360330:CDS
GCTGATCAAGAAACTGATGA+AGG 0.572989 tig0017059:+7524 Msa1360330:CDS
GGAGGAGAAGGAGGAGAAGG+TGG 0.573619 tig0017059:+7557 Msa1360330:CDS
GATTGGAGTATTGGAGTGAA+GGG 0.574818 tig0017059:-10101 None:intergenic
TTTGGTTCAATATCCTCCCA+TGG 0.576367 tig0017059:-9973 None:intergenic
GATCATCATCGCCGCTTGAA+GGG 0.583102 tig0017059:-7487 None:intergenic
AAATACTGCTGGGGCAGCAG+GGG 0.586533 tig0017059:-9905 None:intergenic
GATACCACTGGAGGAGAAGG+AGG 0.586651 tig0017059:+7548 Msa1360330:CDS
AAATTCATATCGGACTTCCA+AGG 0.593050 tig0017059:-9856 None:intergenic
GAAAAGCTGTCGTCTACGAT+GGG 0.599406 tig0017059:+7697 Msa1360330:CDS
CAAGCGAAGTCATCAATCAC+AGG 0.599584 tig0017059:-10677 None:intergenic
AGCAAATCTTAGCACACGAT+GGG 0.601808 tig0017059:+10191 Msa1360330:CDS
GTACCGGACTTGCTCGCTGT+GGG 0.602772 tig0017059:+7675 Msa1360330:CDS
ACTGATGATCAAATACTGCT+GGG 0.604111 tig0017059:-9915 None:intergenic
GTGGTCTAAAGAAAGGTCCA+TGG 0.604974 tig0017059:+7576 Msa1360330:CDS
TTGGAGTATTGGAGTGAAGG+GGG 0.605674 tig0017059:-10099 None:intergenic
GACTGAACAGGCTCAACTGG+AGG 0.608681 tig0017059:-10123 None:intergenic
ACTGATGAAGGAGATACCAC+TGG 0.608872 tig0017059:+7536 Msa1360330:CDS
GAAGACGAAGGAGACGACAT+AGG 0.610440 tig0017059:-9949 None:intergenic
TGTACCGGACTTGCTCGCTG+TGG 0.619659 tig0017059:+7674 Msa1360330:CDS
TCCTTCGTCTTCTCCATGGG+AGG 0.622941 tig0017059:+9960 Msa1360330:CDS
ATATATGGGCTCAAAAGAAG+AGG 0.624061 tig0017059:-10058 None:intergenic
ATTGGAGTATTGGAGTGAAG+GGG 0.626881 tig0017059:-10100 None:intergenic
AAGCAAATCTTAGCACACGA+TGG 0.633585 tig0017059:+10190 Msa1360330:CDS
GCTAGAAGCTTATCGAAACA+TGG 0.638126 tig0017059:-9805 None:intergenic
GGATCTGATTAAATGCAGCA+TGG 0.663610 tig0017059:-10589 None:intergenic
AAAGAAAGGTCCATGGACAA+CGG 0.666614 tig0017059:+7583 Msa1360330:CDS
CATGACCTGCCAAATAAGAG+GGG 0.673721 tig0017059:-10559 None:intergenic
GTTATGAGTAGCCCTTCAAG+CGG 0.680364 tig0017059:+7476 Msa1360330:CDS
CTGATGATCAAATACTGCTG+GGG 0.682047 tig0017059:-9914 None:intergenic
TCCTCCCATGGAGAAGACGA+AGG 0.691634 tig0017059:-9961 None:intergenic
AACACAAGATGCAAGAAACG+GGG 0.712037 tig0017059:+9616 Msa1360330:CDS
AGAAGCTTATCGAAACATGG+TGG 0.728055 tig0017059:-9802 None:intergenic
GATGAAGGAGATACCACTGG+AGG 0.760470 tig0017059:+7539 Msa1360330:CDS
ATGGTGGTAAAATATCTGGG+CGG 0.781920 tig0017059:-9786 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGATAATTAAAGATATTAA+CGG - tig0017059:8224-8243 None:intergenic 10.0%
!!! TAAAATATTTTTGTTCAAAA+AGG + tig0017059:8758-8777 Msa1360330:intron 10.0%
!! AAAATATCTTATATGTATTT+GGG + tig0017059:9317-9336 Msa1360330:intron 10.0%
!! ATTATTATTATTATAGTCAA+AGG - tig0017059:10253-10272 None:intergenic 10.0%
!! TAGATTTGCAAATATAAAAA+AGG - tig0017059:7874-7893 None:intergenic 15.0%
!! TAATCAATTTGTAATTATGA+TGG - tig0017059:8036-8055 None:intergenic 15.0%
!! TATACATTAGTAAAAAACTA+TGG + tig0017059:8328-8347 Msa1360330:intron 15.0%
!! AGAGATAAAATTATACAATT+AGG + tig0017059:8658-8677 Msa1360330:intron 15.0%
!! GAAACAAAAAAATAAGTTAA+GGG + tig0017059:9202-9221 Msa1360330:intron 15.0%
!!! CAAATACATATAAGATATTT+TGG - tig0017059:9318-9337 None:intergenic 15.0%
!! CAAAATATCTTATATGTATT+TGG + tig0017059:9316-9335 Msa1360330:intron 15.0%
!! TGAAAAAATGTTTATTTACT+AGG - tig0017059:9359-9378 None:intergenic 15.0%
!! TAATTGTTTATATATAAGAC+CGG - tig0017059:10346-10365 None:intergenic 15.0%
!! TGATAGTTCATAATTATAAA+CGG - tig0017059:10497-10516 None:intergenic 15.0%
!! AATGAAATCTCTTAAATAAA+AGG - tig0017059:10523-10542 None:intergenic 15.0%
!! ATCATAAGATTGGAAATAAA+TGG + tig0017059:7792-7811 Msa1360330:CDS 20.0%
!! TCATAAGATTGGAAATAAAT+GGG + tig0017059:7793-7812 Msa1360330:CDS 20.0%
!!! TGCTATTATTATTTGACTTT+AGG + tig0017059:7937-7956 Msa1360330:intron 20.0%
!!! GCTATTATTATTTGACTTTA+GGG + tig0017059:7938-7957 Msa1360330:intron 20.0%
!! AAATTGATTAGTAGTATGAT+AGG + tig0017059:8046-8065 Msa1360330:intron 20.0%
!! AAATACAAATATTAGCATGT+AGG - tig0017059:8309-8328 None:intergenic 20.0%
!!! ATTGGACATGTATTTTAAAA+CGG + tig0017059:8387-8406 Msa1360330:intron 20.0%
!! ACACAACATAATAAAGAATA+AGG - tig0017059:8517-8536 None:intergenic 20.0%
!! TTTAGGCTTAATTAATGATT+TGG + tig0017059:8859-8878 Msa1360330:intron 20.0%
!! TTGTAACGTTAATAACTTAT+GGG - tig0017059:8917-8936 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG - tig0017059:8918-8937 None:intergenic 20.0%
!! AAGTTATTAACGTTACAATT+TGG + tig0017059:8919-8938 Msa1360330:intron 20.0%
!! GAAATCAAAAAGTAACTTAA+GGG - tig0017059:8946-8965 None:intergenic 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG - tig0017059:9140-9159 None:intergenic 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG - tig0017059:9140-9159 None:intergenic 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG + tig0017059:9140-9159 Msa1360330:intron 20.0%
!!! CTTATTTTTTTGTTTCGTTT+TGG - tig0017059:9198-9217 None:intergenic 20.0%
!! CGAAACAAAAAAATAAGTTA+AGG + tig0017059:9201-9220 Msa1360330:intron 20.0%
!!! AACTATTAAAAGTTTCGTTT+TGG - tig0017059:9229-9248 None:intergenic 20.0%
!!! AACGAAACTTTTAATAGTTA+AGG + tig0017059:9230-9249 Msa1360330:intron 20.0%
!!! ACGAAACTTTTAATAGTTAA+GGG + tig0017059:9231-9250 Msa1360330:intron 20.0%
!! TTCATATAAAATGTACTCTT+AGG + tig0017059:9375-9394 Msa1360330:intron 20.0%
!! ATTAAGAAGTGATATTGTAA+GGG - tig0017059:9488-9507 None:intergenic 20.0%
!! AATTAAGAAGTGATATTGTA+AGG - tig0017059:9489-9508 None:intergenic 20.0%
!! TATATGTTCATATTCTTTCT+AGG + tig0017059:9515-9534 Msa1360330:intron 20.0%
!!! ATAATGAGATAAAGAACTTT+TGG + tig0017059:9593-9612 Msa1360330:CDS 20.0%
!! TAATCTTTAAATATCACTTC+AGG - tig0017059:9760-9779 None:intergenic 20.0%
!! ATAACTGTACAAATTCATAT+CGG - tig0017059:9869-9888 None:intergenic 20.0%
!! TTATTATTATAGTCAAAGGA+CGG - tig0017059:10249-10268 None:intergenic 20.0%
! TGTTGTATTACTTGACTTTA+AGG + tig0017059:7998-8017 Msa1360330:intron 25.0%
! CAGAAATTGACATGTTTATA+AGG + tig0017059:8732-8751 Msa1360330:intron 25.0%
! GTAACCAACAAATAACTTAA+GGG - tig0017059:8886-8905 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG - tig0017059:8887-8906 None:intergenic 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG + tig0017059:8890-8909 Msa1360330:intron 25.0%
! CGAAATCAAAAAGTAACTTA+AGG - tig0017059:8947-8966 None:intergenic 25.0%
!!! GTTACTTTTTGATTTCGTTT+TGG + tig0017059:8950-8969 Msa1360330:intron 25.0%
! ACGAAACCAAAAATAGTTAA+GGG - tig0017059:8977-8996 None:intergenic 25.0%
! AACGAAACCAAAAATAGTTA+AGG - tig0017059:8978-8997 None:intergenic 25.0%
!!! TAGTCCCTTAACTTATTTTT+TGG + tig0017059:8999-9018 Msa1360330:intron 25.0%
! CGAAACCAAAAAATAAGTTA+AGG - tig0017059:9139-9158 None:intergenic 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG + tig0017059:9010-9029 Msa1360330:intron 25.0%
! CGAAACCAAAAAATAAGTTA+AGG - tig0017059:9139-9158 None:intergenic 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG + tig0017059:9010-9029 Msa1360330:intron 25.0%
! AACGAATGTATTAGAGTTAA+GGG + tig0017059:9109-9128 Msa1360330:intron 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG - tig0017059:9010-9029 None:intergenic 25.0%
! CGAAACCAAAAAATAAGTTA+AGG + tig0017059:9139-9158 Msa1360330:intron 25.0%
!!! GTTACTTTTTGGTTTCATTT+TGG - tig0017059:9258-9277 None:intergenic 25.0%
! TGAAACCAAAAAGTAACTTA+AGG + tig0017059:9261-9280 Msa1360330:intron 25.0%
! GAAACCAAAAAGTAACTTAA+GGG + tig0017059:9262-9281 Msa1360330:intron 25.0%
! ACGTTATTAACGTTACAATT+TGG - tig0017059:9289-9308 None:intergenic 25.0%
! ATTGTAACGTTAATAACGTA+TGG + tig0017059:9290-9309 Msa1360330:intron 25.0%
! TTGTAACGTTAATAACGTAT+GGG + tig0017059:9291-9310 Msa1360330:intron 25.0%
! TTAAGAAGTGATATTGTAAG+GGG - tig0017059:9487-9506 None:intergenic 25.0%
! ATTCAGATGATAAATCTTCA+GGG - tig0017059:9663-9682 None:intergenic 25.0%
! TCTTTGCTTATTTATGTATC+CGG + tig0017059:10445-10464 Msa1360330:intron 25.0%
GTAGCTCATGTTCAAAAATA+CGG + tig0017059:7623-7642 Msa1360330:CDS 30.0%
! ATTGAGTTGCATCATAAGAT+TGG + tig0017059:7782-7801 Msa1360330:CDS 30.0%
AATTATGATGGCACCAAAAA+AGG - tig0017059:8024-8043 None:intergenic 30.0%
!!! ACGGATGGAGTATTTTTTTT+TGG - tig0017059:8147-8166 None:intergenic 30.0%
!! CTTGGACATGTATTTTGAAA+CGG - tig0017059:8166-8185 None:intergenic 30.0%
ATAGTGCACATTGCAAAAAT+TGG + tig0017059:8369-8388 Msa1360330:intron 30.0%
!!! GACATGTATTTTAAAACGGA+GGG + tig0017059:8391-8410 Msa1360330:intron 30.0%
AAAGCATAACTTTCATCAAG+AGG - tig0017059:8597-8616 None:intergenic 30.0%
! ATTTGTCTGCTCTTTTGTTA+CGG + tig0017059:8803-8822 Msa1360330:intron 30.0%
! TTTGGTCCCTTAACTATTTT+TGG + tig0017059:8968-8987 Msa1360330:intron 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG + tig0017059:9030-9049 Msa1360330:intron 30.0%
ATACATTCGTTCTAACGTAA+AGG - tig0017059:9100-9119 None:intergenic 30.0%
GAACGAATGTATTAGAGTTA+AGG + tig0017059:9108-9127 Msa1360330:intron 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG - tig0017059:9030-9049 None:intergenic 30.0%
!!! CTTGTTTTTTGGTTTCGTTT+TGG - tig0017059:9167-9186 None:intergenic 30.0%
!!! TGGTCTCTTAACTTGTTTTT+TGG - tig0017059:9178-9197 None:intergenic 30.0%
AAGAAACAGGAATGAACATA+CGG - tig0017059:9548-9567 None:intergenic 30.0%
CATTCAGATGATAAATCTTC+AGG - tig0017059:9664-9683 None:intergenic 30.0%
AACATGGTGGTAAAATATCT+GGG - tig0017059:9792-9811 None:intergenic 30.0%
AAACATGGTGGTAAAATATC+TGG - tig0017059:9793-9812 None:intergenic 30.0%
GTGCTATCATATTCATGAAA+CGG - tig0017059:10009-10028 None:intergenic 30.0%
TCATGAATATGATAGCACTA+TGG + tig0017059:10011-10030 Msa1360330:CDS 30.0%
ATGTATCTAACGAGATACAT+CGG - tig0017059:10395-10414 None:intergenic 30.0%
!!! TTTAGTTTTCCCCTCTTATT+TGG + tig0017059:10550-10569 Msa1360330:intron 30.0%
TCTCAGAAGAAAAGTAATCT+GGG - tig0017059:10613-10632 None:intergenic 30.0%
! CTCTCAATATGTCAGTTTTG+TGG - tig0017059:7400-7419 None:intergenic 35.0%
TCATGTTCAAAAATACGGTG+AGG + tig0017059:7628-7647 Msa1360330:CDS 35.0%
CATGTTCAAAAATACGGTGA+GGG + tig0017059:7629-7648 Msa1360330:CDS 35.0%
AAAAATACGGTGAGGGAAAT+TGG + tig0017059:7636-7655 Msa1360330:CDS 35.0%
! TGGAAATAAATGGGCTCAAA+TGG + tig0017059:7802-7821 Msa1360330:CDS 35.0%
!!! CTTGACTTTAAGGCCTTTTT+TGG + tig0017059:8008-8027 Msa1360330:intron 35.0%
!!! GACATGTATTTTGAAACGGA+TGG - tig0017059:8162-8181 None:intergenic 35.0%
! CATATGTGAAGTTGTTGACT+TGG - tig0017059:8184-8203 None:intergenic 35.0%
TAACGGTCAAAATTGTGCAT+TGG - tig0017059:8207-8226 None:intergenic 35.0%
!!! GGACATGTATTTTAAAACGG+AGG + tig0017059:8390-8409 Msa1360330:intron 35.0%
TGGTCCCTTAAGTTATTTGT+TGG + tig0017059:8879-8898 Msa1360330:intron 35.0%
!!! TGGTCCCTTAAGTTACTTTT+TGG - tig0017059:8939-8958 None:intergenic 35.0%
GCAACTGAAAGAAAAGAAAC+AGG - tig0017059:9561-9580 None:intergenic 35.0%
! TTTCTTTTCTTTCAGTTGCC+TGG + tig0017059:9562-9581 Msa1360330:intron 35.0%
GATAAATCTTCAGGGTAGAT+TGG - tig0017059:9655-9674 None:intergenic 35.0%
AATTCATATCGGACTTCCAA+GGG - tig0017059:9858-9877 None:intergenic 35.0%
AAATTCATATCGGACTTCCA+AGG - tig0017059:9859-9878 None:intergenic 35.0%
ACTGATGATCAAATACTGCT+GGG - tig0017059:9918-9937 None:intergenic 35.0%
AACTGATGATCAAATACTGC+TGG - tig0017059:9919-9938 None:intergenic 35.0%
!! TGAAACGGATTGTAGCTATT+TGG - tig0017059:9994-10013 None:intergenic 35.0%
!!! AAAGAAGAGGTTTTTGGTGT+GGG - tig0017059:10048-10067 None:intergenic 35.0%
!!! AAAAGAAGAGGTTTTTGGTG+TGG - tig0017059:10049-10068 None:intergenic 35.0%
ATATATGGGCTCAAAAGAAG+AGG - tig0017059:10061-10080 None:intergenic 35.0%
! TCTTCTTTTGAGCCCATATA+TGG + tig0017059:10060-10079 Msa1360330:CDS 35.0%
! CTTCTTTTGAGCCCATATAT+GGG + tig0017059:10061-10080 Msa1360330:CDS 35.0%
GTCTTCATGAACCCATATAT+GGG - tig0017059:10075-10094 None:intergenic 35.0%
AGTCTTCATGAACCCATATA+TGG - tig0017059:10076-10095 None:intergenic 35.0%
! CAGTTCCAATTTCTCTAGAA+AGG + tig0017059:10145-10164 Msa1360330:CDS 35.0%
! TGACTCCTTTCTAGAGAAAT+TGG - tig0017059:10153-10172 None:intergenic 35.0%
! TGTGCTAAGATTTGCTTCAT+TGG - tig0017059:10187-10206 None:intergenic 35.0%
GGTTAGCAATATACTCTTTC+CGG + tig0017059:10324-10343 Msa1360330:intron 35.0%
TTGCTTATTTATGTATCCGG+AGG + tig0017059:10448-10467 Msa1360330:intron 35.0%
TGCTTATTTATGTATCCGGA+GGG + tig0017059:10449-10468 Msa1360330:intron 35.0%
CTCTCAGAAGAAAAGTAATC+TGG - tig0017059:10614-10633 None:intergenic 35.0%
! GATGATGGCGATCACAAAAT+AGG + tig0017059:7443-7462 Msa1360330:CDS 40.0%
GCTGATCAAGAAACTGATGA+AGG + tig0017059:7524-7543 Msa1360330:CDS 40.0%
AAAGAAAGGTCCATGGACAA+CGG + tig0017059:7583-7602 Msa1360330:CDS 40.0%
ATGATTCGACGTTCTTCTTC+AGG - tig0017059:7764-7783 None:intergenic 40.0%
ACCACCATCATGTGGATAAT+CGG - tig0017059:8547-8566 None:intergenic 40.0%
TAAAGGACCAAAGTGGTTGA+CGG - tig0017059:9083-9102 None:intergenic 40.0%
TCTAACGTAAAGGACCAAAG+TGG - tig0017059:9090-9109 None:intergenic 40.0%
GGAACACAAGATGCAAGAAA+CGG + tig0017059:9614-9633 Msa1360330:CDS 40.0%
GAACACAAGATGCAAGAAAC+GGG + tig0017059:9615-9634 Msa1360330:CDS 40.0%
AACACAAGATGCAAGAAACG+GGG + tig0017059:9616-9635 Msa1360330:CDS 40.0%
ATGGTGGTAAAATATCTGGG+CGG - tig0017059:9789-9808 None:intergenic 40.0%
AGAAGCTTATCGAAACATGG+TGG - tig0017059:9805-9824 None:intergenic 40.0%
GCTAGAAGCTTATCGAAACA+TGG - tig0017059:9808-9827 None:intergenic 40.0%
TGTTTCGATAAGCTTCTAGC+TGG + tig0017059:9808-9827 Msa1360330:CDS 40.0%
CTGATGATCAAATACTGCTG+GGG - tig0017059:9917-9936 None:intergenic 40.0%
! TTTGGTTCAATATCCTCCCA+TGG - tig0017059:9976-9995 None:intergenic 40.0%
!!! AAGAAGAGGTTTTTGGTGTG+GGG - tig0017059:10047-10066 None:intergenic 40.0%
! GGCTCAAAAGAAGAGGTTTT+TGG - tig0017059:10054-10073 None:intergenic 40.0%
!! ATTGGAGTATTGGAGTGAAG+GGG - tig0017059:10103-10122 None:intergenic 40.0%
!! GATTGGAGTATTGGAGTGAA+GGG - tig0017059:10104-10123 None:intergenic 40.0%
GAAATTGGAACTGACTGAAC+AGG - tig0017059:10138-10157 None:intergenic 40.0%
AAGCAAATCTTAGCACACGA+TGG + tig0017059:10190-10209 Msa1360330:CDS 40.0%
AGCAAATCTTAGCACACGAT+GGG + tig0017059:10191-10210 Msa1360330:CDS 40.0%
GAGTCAGATGATCAGTATGA+TGG + tig0017059:10216-10235 Msa1360330:CDS 40.0%
ATGAACATGTGCTCAACTGA+TGG + tig0017059:10276-10295 Msa1360330:intron 40.0%
TGAACATGTGCTCAACTGAT+GGG + tig0017059:10277-10296 Msa1360330:intron 40.0%
ATGACACTTAATACTCCCTC+CGG - tig0017059:10467-10486 None:intergenic 40.0%
TCATGACCTGCCAAATAAGA+GGG - tig0017059:10563-10582 None:intergenic 40.0%
ATCATGACCTGCCAAATAAG+AGG - tig0017059:10564-10583 None:intergenic 40.0%
GGATCTGATTAAATGCAGCA+TGG - tig0017059:10592-10611 None:intergenic 40.0%
! CTTCTGAGAGAGATGATTTG+AGG + tig0017059:10624-10643 Msa1360330:CDS 40.0%
AGCGCTTCAAGCGAAGATTA+TGG + tig0017059:7371-7390 Msa1360330:CDS 45.0%
GTTATGAGTAGCCCTTCAAG+CGG + tig0017059:7476-7495 Msa1360330:CDS 45.0%
ACTGATGAAGGAGATACCAC+TGG + tig0017059:7536-7555 Msa1360330:CDS 45.0%
GGAGAAGGTGGTCTAAAGAA+AGG + tig0017059:7569-7588 Msa1360330:CDS 45.0%
GTGGTCTAAAGAAAGGTCCA+TGG + tig0017059:7576-7595 Msa1360330:CDS 45.0%
AACGGCAGAGGATGAAATCT+TGG + tig0017059:7601-7620 Msa1360330:CDS 45.0%
AGGGAAATTGGAACTCTGTC+CGG + tig0017059:7648-7667 Msa1360330:CDS 45.0%
GAAAAGCTGTCGTCTACGAT+GGG + tig0017059:7697-7716 Msa1360330:CDS 45.0%
! TCTGAGACCTGATCTCAGAA+AGG + tig0017059:7727-7746 Msa1360330:CDS 45.0%
CTGAGACCTGATCTCAGAAA+GGG + tig0017059:7728-7747 Msa1360330:CDS 45.0%
!! ATTGCACCCTTTCTGAGATC+AGG - tig0017059:7737-7756 None:intergenic 45.0%
! GATGCCGATTATCCACATGA+TGG + tig0017059:8540-8559 Msa1360330:intron 45.0%
!! GATTATCCACATGATGGTGG+TGG + tig0017059:8546-8565 Msa1360330:intron 45.0%
! GCTCTTTTGTTACGGTCACA+AGG + tig0017059:8811-8830 Msa1360330:intron 45.0%
GTTGACGGAGGAAGAGTTAA+GGG - tig0017059:9068-9087 None:intergenic 45.0%
CTTGAGGGTAAGTAGTAGGT+TGG - tig0017059:9445-9464 None:intergenic 45.0%
CTACTACTTACCCTCAAGCA+GGG + tig0017059:9447-9466 Msa1360330:intron 45.0%
!! GTTTTGACAACCCTGCTTGA+GGG - tig0017059:9460-9479 None:intergenic 45.0%
!!! TGTTTTGACAACCCTGCTTG+AGG - tig0017059:9461-9480 None:intergenic 45.0%
ATCTCATTATCTGTGCGTCC+AGG - tig0017059:9583-9602 None:intergenic 45.0%
TGTTCTCTGCTTCATCATGC+TGG - tig0017059:9732-9751 None:intergenic 45.0%
!! TTGGAGTATTGGAGTGAAGG+GGG - tig0017059:10102-10121 None:intergenic 45.0%
!! GGATTGGAGTATTGGAGTGA+AGG - tig0017059:10105-10124 None:intergenic 45.0%
CAACTGGAGGATTGGAGTAT+TGG - tig0017059:10113-10132 None:intergenic 45.0%
CACTCAGCTGAAACTACTCA+GGG + tig0017059:10303-10322 Msa1360330:intron 45.0%
!! GTTTTCCCCTCTTATTTGGC+AGG + tig0017059:10554-10573 Msa1360330:intron 45.0%
CATGACCTGCCAAATAAGAG+GGG - tig0017059:10562-10581 None:intergenic 45.0%
CAAGCGAAGTCATCAATCAC+AGG - tig0017059:10680-10699 None:intergenic 45.0%
! CTGTGATTGATGACTTCGCT+TGG + tig0017059:10678-10697 Msa1360330:CDS 45.0%
!!! TTTTTATTCAATTTTATTTT+TGG + tig0017059:8621-8640 Msa1360330:intron 5.0%
!!! CAAATATTAATATATATTTT+AGG + tig0017059:8842-8861 Msa1360330:intron 5.0%
AGCGCTTCAAGCGAAGATGA+TGG + tig0017059:7428-7447 Msa1360330:CDS 50.0%
GATCATCATCGCCGCTTGAA+GGG - tig0017059:7490-7509 None:intergenic 50.0%
GATGAAGGAGATACCACTGG+AGG + tig0017059:7539-7558 Msa1360330:CDS 50.0%
! AACTCTGTCCGGAAGTGTAC+CGG + tig0017059:7659-7678 Msa1360330:CDS 50.0%
GGAAAAGCTGTCGTCTACGA+TGG + tig0017059:7696-7715 Msa1360330:CDS 50.0%
GCCGATTATCCACATGATGG+TGG + tig0017059:8543-8562 Msa1360330:intron 50.0%
TGAAGTCCACCACCATCATG+TGG - tig0017059:8555-8574 None:intergenic 50.0%
GGTTGACGGAGGAAGAGTTA+AGG - tig0017059:9069-9088 None:intergenic 50.0%
TCTTCCTCCGTCAACCACTT+TGG + tig0017059:9073-9092 Msa1360330:intron 50.0%
CCTGCTTGAGGGTAAGTAGT+AGG - tig0017059:9449-9468 None:intergenic 50.0%
CCTACTACTTACCCTCAAGC+AGG + tig0017059:9446-9465 Msa1360330:intron 50.0%
!! ATCATGCTGGCTGGCTTCAT+TGG - tig0017059:9719-9738 None:intergenic 50.0%
GAAGACGAAGGAGACGACAT+AGG - tig0017059:9952-9971 None:intergenic 50.0%
GTCTCCTTCGTCTTCTCCAT+GGG + tig0017059:9957-9976 Msa1360330:CDS 50.0%
AACAGGCTCAACTGGAGGAT+TGG - tig0017059:10121-10140 None:intergenic 50.0%
ACTGACTGAACAGGCTCAAC+TGG - tig0017059:10129-10148 None:intergenic 50.0%
CCTGAGTAGTTTCAGCTGAG+TGG - tig0017059:10305-10324 None:intergenic 50.0%
CCACTCAGCTGAAACTACTC+AGG + tig0017059:10302-10321 Msa1360330:intron 50.0%
CGATCATCATCGCCGCTTGA+AGG - tig0017059:7491-7510 None:intergenic 55.0%
GCGGCGATGATGATCGCAAA+AGG + tig0017059:7495-7514 Msa1360330:CDS 55.0%
GGAGATACCACTGGAGGAGA+AGG + tig0017059:7545-7564 Msa1360330:CDS 55.0%
GATACCACTGGAGGAGAAGG+AGG + tig0017059:7548-7567 Msa1360330:CDS 55.0%
TTCTCCTCCTTCTCCTCCAG+TGG - tig0017059:7555-7574 None:intergenic 55.0%
ACTGGAGGAGAAGGAGGAGA+AGG + tig0017059:7554-7573 Msa1360330:CDS 55.0%
TCATCCTCTGCCGTTGTCCA+TGG - tig0017059:7596-7615 None:intergenic 55.0%
GAGCAAGTCCGGTACACTTC+CGG - tig0017059:7670-7689 None:intergenic 55.0%
TTTCCCACAGCGAGCAAGTC+CGG - tig0017059:7681-7700 None:intergenic 55.0%
ATGGGCTCAAATGGCTGCAC+TGG + tig0017059:7811-7830 Msa1360330:CDS 55.0%
AGGACCAAAGTGGTTGACGG+AGG - tig0017059:9080-9099 None:intergenic 55.0%
CTCTGCTTCATCATGCTGGC+TGG - tig0017059:9728-9747 None:intergenic 55.0%
!! GACTTCCAAGGGCGCTTTGA+GGG - tig0017059:9847-9866 None:intergenic 55.0%
AAATACTGCTGGGGCAGCAG+GGG - tig0017059:9908-9927 None:intergenic 55.0%
CAAATACTGCTGGGGCAGCA+GGG - tig0017059:9909-9928 None:intergenic 55.0%
TCAAATACTGCTGGGGCAGC+AGG - tig0017059:9910-9929 None:intergenic 55.0%
CGTCTCCTTCGTCTTCTCCA+TGG + tig0017059:9956-9975 Msa1360330:CDS 55.0%
TCCTTCGTCTTCTCCATGGG+AGG + tig0017059:9960-9979 Msa1360330:CDS 55.0%
TCCTCCCATGGAGAAGACGA+AGG - tig0017059:9964-9983 None:intergenic 55.0%
GACTGAACAGGCTCAACTGG+AGG - tig0017059:10126-10145 None:intergenic 55.0%
TCAATCACAGGCGCAGCATC+TGG - tig0017059:10668-10687 None:intergenic 55.0%
GGAGGAGAAGGAGGAGAAGG+TGG + tig0017059:7557-7576 Msa1360330:CDS 60.0%
AGGTCCATGGACAACGGCAG+AGG + tig0017059:7589-7608 Msa1360330:CDS 60.0%
! TGTACCGGACTTGCTCGCTG+TGG + tig0017059:7674-7693 Msa1360330:CDS 60.0%
! GTACCGGACTTGCTCGCTGT+GGG + tig0017059:7675-7694 Msa1360330:CDS 60.0%
!! GGACTTCCAAGGGCGCTTTG+AGG - tig0017059:9848-9867 None:intergenic 60.0%
! TGCGTCCCTCAAAGCGCCCT+TGG + tig0017059:9839-9858 Msa1360330:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0017059 gene 7365 10718 7365 ID=Msa1360330;Name=Msa1360330
tig0017059 mRNA 7365 10718 7365 ID=Msa1360330-mRNA-1;Parent=Msa1360330;Name=Msa1360330-mRNA-1;_AED=0.06;_eAED=0.07;_QI=0|0|0|1|0.5|0.66|3|0|430
tig0017059 exon 7365 7832 7365 ID=Msa1360330-mRNA-1:exon:11874;Parent=Msa1360330-mRNA-1
tig0017059 exon 9577 10237 9577 ID=Msa1360330-mRNA-1:exon:11875;Parent=Msa1360330-mRNA-1
tig0017059 exon 10555 10718 10555 ID=Msa1360330-mRNA-1:exon:11876;Parent=Msa1360330-mRNA-1
tig0017059 CDS 7365 7832 7365 ID=Msa1360330-mRNA-1:cds;Parent=Msa1360330-mRNA-1
tig0017059 CDS 9577 10237 9577 ID=Msa1360330-mRNA-1:cds;Parent=Msa1360330-mRNA-1
tig0017059 CDS 10555 10718 10555 ID=Msa1360330-mRNA-1:cds;Parent=Msa1360330-mRNA-1
Gene Sequence

>Msa1360330

ATGAGTAGCGCTTCAAGCGAAGATTATGGCGACCACAAAACTGACATATTGAGAGTCATGAATAGCGCTTCAAGCGAAGATGATGGCGATCACAAAATAGGCATATTGAGTGTTATGAGTAGCCCTTCAAGCGGCGATGATGATCGCAAAAGGCTATCAGCTGATCAAGAAACTGATGAAGGAGATACCACTGGAGGAGAAGGAGGAGAAGGTGGTCTAAAGAAAGGTCCATGGACAACGGCAGAGGATGAAATCTTGGTAGCTCATGTTCAAAAATACGGTGAGGGAAATTGGAACTCTGTCCGGAAGTGTACCGGACTTGCTCGCTGTGGGAAAAGCTGTCGTCTACGATGGGCAAATCATCTGAGACCTGATCTCAGAAAGGGTGCAATTACTCCTGAAGAAGAACGTCGAATCATTGAGTTGCATCATAAGATTGGAAATAAATGGGCTCAAATGGCTGCACTGTTGCCTGGACGCACAGATAATGAGATAAAGAACTTTTGGAACACAAGATGCAAGAAACGGGGTCGAGCAAACTTACCAATCTACCCTGAAGATTTATCATCTGAATGTCTGCTGAATCAAGAAAATGCTGACATGTTGACCAATGAAGCCAGCCAGCATGATGAAGCAGAGAACAAAGTACCTGAAGTGATATTTAAAGATTACAAACTCCGCCCAGATATTTTACCACCATGTTTCGATAAGCTTCTAGCTGGCTTGTTATTGCGTCCCTCAAAGCGCCCTTGGAAGTCCGATATGAATTTGTACAGTTATAGCAATAATGCTGCTGCCCCTGCTGCCCCAGCAGTATTTGATCATCAGTTCAGAAAATATCCTATGTCGTCTCCTTCGTCTTCTCCATGGGAGGATATTGAACCAAATAGCTACAATCCGTTTCATGAATATGATAGCACTATGGTTGATATTCACCCCACACCAAAAACCTCTTCTTTTGAGCCCATATATGGGTTCATGAAGACTGAGCCCCCTTCACTCCAATACTCCAATCCTCCAGTTGAGCCTGTTCAGTCAGTTCCAATTTCTCTAGAAAGGAGTCATTTTCTTCAATCCAATGAAGCAAATCTTAGCACACGATGGGATGAGTCAGATGATCAGTATGATGTTTTCCCCTCTTATTTGGCAGGTCATGATATTAACCATGCTGCATTTAATCAGATCCCAGATTACTTTTCTTCTGAGAGAGATGATTTGAGGAGAAAAATATTTGCGCATCCAGATGCTGCGCCTGTGATTGATGACTTCGCTTGGTATTATAAAATAGAATAA
Protein sequence

>Msa1360330

MSSASSEDYGDHKTDILRVMNSASSEDDGDHKIGILSVMSSPSSGDDDRKRLSADQETDEGDTTGGEGGEGGLKKGPWTTAEDEILVAHVQKYGEGNWNSVRKCTGLARCGKSCRLRWANHLRPDLRKGAITPEEERRIIELHHKIGNKWAQMAALLPGRTDNEIKNFWNTRCKKRGRANLPIYPEDLSSECLLNQENADMLTNEASQHDEAENKVPEVIFKDYKLRPDILPPCFDKLLAGLLLRPSKRPWKSDMNLYSYSNNAAAPAAPAVFDHQFRKYPMSSPSSSPWEDIEPNSYNPFHEYDSTMVDIHPTPKTSSFEPIYGFMKTEPPSLQYSNPPVEPVQSVPISLERSHFLQSNEANLSTRWDESDDQYDVFPSYLAGHDINHAAFNQIPDYFSSERDDLRRKIFAHPDAAPVIDDFAWYYKIE*