Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1363030 | AES92175.2 | 75.397 | 126 | 27 | 1 | 1 | 122 | 1 | 126 | 1.71e-55 | 179 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1363030 | sp|Q8H395|TI10B_ORYSJ | 37.423 | 163 | 65 | 6 | 1 | 130 | 71 | 229 | 2.26e-19 | 83.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1363030 | G7JS77 | 75.397 | 126 | 27 | 1 | 1 | 122 | 1 | 126 | 8.17e-56 | 179 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1363030 | TF | Tify |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1363030 | MtrunA17_Chr4g0070271 | 69.466 | 131 | 38 | 2 | 1 | 130 | 67 | 196 | 8.36e-54 | 167 |
| Msa1363030 | MtrunA17_Chr4g0070241 | 92.188 | 64 | 5 | 0 | 1 | 64 | 1 | 64 | 4.94e-37 | 121 |
| Msa1363030 | MtrunA17_Chr2g0301131 | 37.912 | 182 | 53 | 7 | 1 | 130 | 72 | 245 | 1.83e-26 | 99.4 |
| Msa1363030 | MtrunA17_Chr5g0399851 | 35.659 | 129 | 60 | 3 | 25 | 130 | 11 | 139 | 1.12e-18 | 76.6 |
| Msa1363030 | MtrunA17_Chr5g0399881 | 38.562 | 153 | 65 | 6 | 7 | 130 | 5 | 157 | 1.71e-18 | 76.6 |
| Msa1363030 | MtrunA17_Chr5g0399861 | 35.526 | 152 | 70 | 4 | 7 | 130 | 5 | 156 | 1.09e-16 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1363030 | AT1G19180.2 | 33.974 | 156 | 69 | 3 | 2 | 123 | 17 | 172 | 2.09e-16 | 72.0 |
| Msa1363030 | AT1G19180.1 | 33.974 | 156 | 69 | 3 | 2 | 123 | 83 | 238 | 4.92e-16 | 72.0 |
| Msa1363030 | AT1G19180.3 | 33.974 | 156 | 69 | 3 | 2 | 123 | 83 | 238 | 4.92e-16 | 72.0 |
| Msa1363030 | AT1G74950.1 | 36.923 | 130 | 47 | 4 | 30 | 124 | 112 | 241 | 3.02e-14 | 67.4 |
Find 24 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTCACTTCTTCGATTCA+TGG | 0.237608 | tig0018025:+69722 | Msa1363030:CDS |
| AATGTCAACTGTGCAGTTTC+CGG | 0.323565 | tig0018025:-69428 | None:intergenic |
| TTTAGCACCTAAAACAAGTA+TGG | 0.324800 | tig0018025:-70592 | None:intergenic |
| TCGGAATCGCTTCTTTGATA+TGG | 0.333476 | tig0018025:-70538 | None:intergenic |
| CAACCACCTCCTACACTAAC+TGG | 0.374106 | tig0018025:+69566 | Msa1363030:CDS |
| TTATTTCTTTAAAGAAGATA+TGG | 0.376656 | tig0018025:+69686 | Msa1363030:intron |
| TAATGGAGAAGTTATTGTAT+TGG | 0.400656 | tig0018025:+69457 | Msa1363030:CDS |
| GCTTCTTTGATATGGTGATT+TGG | 0.408539 | tig0018025:-70530 | None:intergenic |
| TAACTCAATGGTTAACAAAC+CGG | 0.425259 | tig0018025:+69409 | Msa1363030:CDS |
| GGTGGTTGAAGACTCATATC+AGG | 0.439597 | tig0018025:-69551 | None:intergenic |
| AGCTCCTCAACTTTGTCAGC+AGG | 0.455494 | tig0018025:-69488 | None:intergenic |
| TTACAGAACTAATAACTCAA+TGG | 0.476118 | tig0018025:+69397 | Msa1363030:intron |
| TTCTTCGATTCATGGAGAAA+AGG | 0.478429 | tig0018025:+69730 | Msa1363030:CDS |
| CAATTACCAGTTAGTGTAGG+AGG | 0.522487 | tig0018025:-69572 | None:intergenic |
| CTGTGGATTCTTTGTCTCCA+AGG | 0.531713 | tig0018025:+69253 | Msa1363030:CDS |
| TCATGGAGAAAAGGAAAGCC+AGG | 0.536399 | tig0018025:+69739 | Msa1363030:CDS |
| CATTTGCAAGCACTCAAACT+CGG | 0.560353 | tig0018025:+69516 | Msa1363030:CDS |
| AAGTATGGAGTGGATTCAGT+AGG | 0.584677 | tig0018025:-70577 | None:intergenic |
| CACCTAAAACAAGTATGGAG+TGG | 0.594681 | tig0018025:-70587 | None:intergenic |
| CTCATATCAGGAATAACTGA+AGG | 0.598557 | tig0018025:-69539 | None:intergenic |
| GTTTGTGGGAAATAAGTCCA+TGG | 0.603000 | tig0018025:-69208 | None:intergenic |
| TTACCAGTTAGTGTAGGAGG+TGG | 0.608915 | tig0018025:-69569 | None:intergenic |
| GAGCAATTACCAGTTAGTGT+AGG | 0.610011 | tig0018025:-69575 | None:intergenic |
| CTTGGAGACAAAGAATCCAC+AGG | 0.648213 | tig0018025:-69252 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATATTTTGAAACAAATAA+AGG | + | tig0018025:69610-69629 | Msa1363030:intron | 10.0% |
| !!! | TAATATTTTGAAACAAATAA+AGG | + | tig0018025:69610-69629 | Msa1363030:intron | 10.0% |
| !!! | AAGGAAATATTTTTTGTATT+AGG | + | tig0018025:69629-69648 | Msa1363030:intron | 15.0% |
| !!! | AGGAAATATTTTTTGTATTA+GGG | + | tig0018025:69630-69649 | Msa1363030:intron | 15.0% |
| !! | AAGAAATAAAATTTATGATC+AGG | - | tig0018025:69675-69694 | None:intergenic | 15.0% |
| !!! | TTATTTCTTTAAAGAAGATA+TGG | + | tig0018025:69686-69705 | Msa1363030:intron | 15.0% |
| !!! | TAAATTCAAGTTTTTATTCA+AGG | + | tig0018025:69780-69799 | Msa1363030:intron | 15.0% |
| !!! | TCAATCAACTAATATTTTTT+TGG | + | tig0018025:69917-69936 | Msa1363030:intron | 15.0% |
| !!! | CAATCAACTAATATTTTTTT+GGG | + | tig0018025:69918-69937 | Msa1363030:intron | 15.0% |
| !!! | ATTATGAATATTTTGATTAC+CGG | - | tig0018025:70035-70054 | None:intergenic | 15.0% |
| !!! | AAGGAAATATTTTTTGTATT+AGG | + | tig0018025:69629-69648 | Msa1363030:intron | 15.0% |
| !!! | AGGAAATATTTTTTGTATTA+GGG | + | tig0018025:69630-69649 | Msa1363030:intron | 15.0% |
| !! | AAGAAATAAAATTTATGATC+AGG | - | tig0018025:69675-69694 | None:intergenic | 15.0% |
| !!! | TTATTTCTTTAAAGAAGATA+TGG | + | tig0018025:69686-69705 | Msa1363030:intron | 15.0% |
| !!! | TAAATTCAAGTTTTTATTCA+AGG | + | tig0018025:69780-69799 | Msa1363030:intron | 15.0% |
| !!! | TCAATCAACTAATATTTTTT+TGG | + | tig0018025:69917-69936 | Msa1363030:intron | 15.0% |
| !!! | CAATCAACTAATATTTTTTT+GGG | + | tig0018025:69918-69937 | Msa1363030:intron | 15.0% |
| !!! | ATTATGAATATTTTGATTAC+CGG | - | tig0018025:70035-70054 | None:intergenic | 15.0% |
| !! | TAACAGTAACACTATATATT+AGG | - | tig0018025:70480-70499 | None:intergenic | 20.0% |
| !! | TAACAGTAACACTATATATT+AGG | - | tig0018025:70480-70499 | None:intergenic | 20.0% |
| ! | TTACAGAACTAATAACTCAA+TGG | + | tig0018025:69397-69416 | Msa1363030:intron | 25.0% |
| !!! | CAGTTGACATTGTTTTATAA+TGG | + | tig0018025:69440-69459 | Msa1363030:CDS | 25.0% |
| ! | TAATGGAGAAGTTATTGTAT+TGG | + | tig0018025:69457-69476 | Msa1363030:CDS | 25.0% |
| !!! | TTGAATTTAATTTGTCTGAG+AGG | - | tig0018025:69769-69788 | None:intergenic | 25.0% |
| ! | TTGTTTCAACATTTCAATCA+AGG | - | tig0018025:69895-69914 | None:intergenic | 25.0% |
| !!! | GTAAAATGTGATTTTTGAGA+TGG | - | tig0018025:70268-70287 | None:intergenic | 25.0% |
| ! | GTAACACTATATATTAGGTT+AGG | - | tig0018025:70475-70494 | None:intergenic | 25.0% |
| ! | TTACAGAACTAATAACTCAA+TGG | + | tig0018025:69397-69416 | Msa1363030:intron | 25.0% |
| !!! | CAGTTGACATTGTTTTATAA+TGG | + | tig0018025:69440-69459 | Msa1363030:CDS | 25.0% |
| ! | TAATGGAGAAGTTATTGTAT+TGG | + | tig0018025:69457-69476 | Msa1363030:CDS | 25.0% |
| !!! | TTGAATTTAATTTGTCTGAG+AGG | - | tig0018025:69769-69788 | None:intergenic | 25.0% |
| ! | TTGTTTCAACATTTCAATCA+AGG | - | tig0018025:69895-69914 | None:intergenic | 25.0% |
| !!! | GTAAAATGTGATTTTTGAGA+TGG | - | tig0018025:70268-70287 | None:intergenic | 25.0% |
| ! | GTAACACTATATATTAGGTT+AGG | - | tig0018025:70475-70494 | None:intergenic | 25.0% |
| TAACTCAATGGTTAACAAAC+CGG | + | tig0018025:69409-69428 | Msa1363030:CDS | 30.0% | |
| GTTGTCGTAACTTTGTAATT+TGG | + | tig0018025:70162-70181 | Msa1363030:intron | 30.0% | |
| !! | AGTAGTTGATGATATGCATA+AGG | - | tig0018025:70235-70254 | None:intergenic | 30.0% |
| !! | TCAATTTCTAGTAACACAAG+TGG | - | tig0018025:70337-70356 | None:intergenic | 30.0% |
| TAACTCAATGGTTAACAAAC+CGG | + | tig0018025:69409-69428 | Msa1363030:CDS | 30.0% | |
| GTTGTCGTAACTTTGTAATT+TGG | + | tig0018025:70162-70181 | Msa1363030:intron | 30.0% | |
| !! | AGTAGTTGATGATATGCATA+AGG | - | tig0018025:70235-70254 | None:intergenic | 30.0% |
| !! | TCAATTTCTAGTAACACAAG+TGG | - | tig0018025:70337-70356 | None:intergenic | 30.0% |
| !!! | TTTTTTGGTGTCACGTTTGT+GGG | - | tig0018025:69225-69244 | None:intergenic | 35.0% |
| ! | AGAAGCACAAAAACATACCT+TGG | - | tig0018025:69273-69292 | None:intergenic | 35.0% |
| !!! | TTTTTTGCACACAAGCAATG+GGG | - | tig0018025:69334-69353 | None:intergenic | 35.0% |
| !!! | CTTTTTTGCACACAAGCAAT+GGG | - | tig0018025:69335-69354 | None:intergenic | 35.0% |
| !!! | ACTTTTTTGCACACAAGCAA+TGG | - | tig0018025:69336-69355 | None:intergenic | 35.0% |
| CTCATATCAGGAATAACTGA+AGG | - | tig0018025:69542-69561 | None:intergenic | 35.0% | |
| TTCTTCGATTCATGGAGAAA+AGG | + | tig0018025:69730-69749 | Msa1363030:CDS | 35.0% | |
| !!! | CAACTTTCGTGTTGTTTTCA+CGG | - | tig0018025:70146-70165 | None:intergenic | 35.0% |
| TAGAATTGGATGGAATCAGT+TGG | - | tig0018025:70294-70313 | None:intergenic | 35.0% | |
| ! | AACTGATTCCATCCAATTCT+AGG | + | tig0018025:70293-70312 | Msa1363030:intron | 35.0% |
| ACTGCAAAGTAAGTAACAAG+AGG | - | tig0018025:70429-70448 | None:intergenic | 35.0% | |
| ATTTCCTGAGTGATGTTGTT+TGG | + | tig0018025:70449-70468 | Msa1363030:intron | 35.0% | |
| GCTTCTTTGATATGGTGATT+TGG | - | tig0018025:70533-70552 | None:intergenic | 35.0% | |
| !!! | GTGGATTCAGTAGGTTTTTT+TGG | - | tig0018025:70571-70590 | None:intergenic | 35.0% |
| !!! | TTTTTTGGTGTCACGTTTGT+GGG | - | tig0018025:69225-69244 | None:intergenic | 35.0% |
| ! | AGAAGCACAAAAACATACCT+TGG | - | tig0018025:69273-69292 | None:intergenic | 35.0% |
| !!! | TTTTTTGCACACAAGCAATG+GGG | - | tig0018025:69334-69353 | None:intergenic | 35.0% |
| !!! | CTTTTTTGCACACAAGCAAT+GGG | - | tig0018025:69335-69354 | None:intergenic | 35.0% |
| !!! | ACTTTTTTGCACACAAGCAA+TGG | - | tig0018025:69336-69355 | None:intergenic | 35.0% |
| CTCATATCAGGAATAACTGA+AGG | - | tig0018025:69542-69561 | None:intergenic | 35.0% | |
| TTCTTCGATTCATGGAGAAA+AGG | + | tig0018025:69730-69749 | Msa1363030:CDS | 35.0% | |
| !!! | CAACTTTCGTGTTGTTTTCA+CGG | - | tig0018025:70146-70165 | None:intergenic | 35.0% |
| TAGAATTGGATGGAATCAGT+TGG | - | tig0018025:70294-70313 | None:intergenic | 35.0% | |
| ! | AACTGATTCCATCCAATTCT+AGG | + | tig0018025:70293-70312 | Msa1363030:intron | 35.0% |
| ACTGCAAAGTAAGTAACAAG+AGG | - | tig0018025:70429-70448 | None:intergenic | 35.0% | |
| ATTTCCTGAGTGATGTTGTT+TGG | + | tig0018025:70449-70468 | Msa1363030:intron | 35.0% | |
| GCTTCTTTGATATGGTGATT+TGG | - | tig0018025:70533-70552 | None:intergenic | 35.0% | |
| !!! | GTGGATTCAGTAGGTTTTTT+TGG | - | tig0018025:70571-70590 | None:intergenic | 35.0% |
| !!! | GTTTTTTGGTGTCACGTTTG+TGG | - | tig0018025:69226-69245 | None:intergenic | 40.0% |
| ACCAAAAAACGTTACACCTG+TGG | + | tig0018025:69236-69255 | Msa1363030:CDS | 40.0% | |
| !!! | TCCACAGGTGTAACGTTTTT+TGG | - | tig0018025:69240-69259 | None:intergenic | 40.0% |
| GCAATGGGGCAAAACAAAAA+TGG | - | tig0018025:69320-69339 | None:intergenic | 40.0% | |
| AATGTCAACTGTGCAGTTTC+CGG | - | tig0018025:69431-69450 | None:intergenic | 40.0% | |
| ! | TTTTCCTGCTGACAAAGTTG+AGG | + | tig0018025:69484-69503 | Msa1363030:CDS | 40.0% |
| CATTTGCAAGCACTCAAACT+CGG | + | tig0018025:69516-69535 | Msa1363030:CDS | 40.0% | |
| CAATTACCAGTTAGTGTAGG+AGG | - | tig0018025:69575-69594 | None:intergenic | 40.0% | |
| GAGCAATTACCAGTTAGTGT+AGG | - | tig0018025:69578-69597 | None:intergenic | 40.0% | |
| AGCTTCACTTCTTCGATTCA+TGG | + | tig0018025:69722-69741 | Msa1363030:CDS | 40.0% | |
| ATAGACAGAGACATGGAGAA+GGG | - | tig0018025:69872-69891 | None:intergenic | 40.0% | |
| ATCAAGGATAGACAGAGACA+TGG | - | tig0018025:69879-69898 | None:intergenic | 40.0% | |
| CAAGCAAAATCAAGGACTTC+CGG | + | tig0018025:70013-70032 | Msa1363030:intron | 40.0% | |
| CACTATTTATGTTCCTCTCG+TGG | - | tig0018025:70081-70100 | None:intergenic | 40.0% | |
| TTGTGCTCATGCTCTTACAA+GGG | - | tig0018025:70107-70126 | None:intergenic | 40.0% | |
| !!! | TTCGTGTTGTTTTCACGGTA+CGG | - | tig0018025:70141-70160 | None:intergenic | 40.0% |
| TCTAGTAACACAAGTGGCTT+TGG | - | tig0018025:70331-70350 | None:intergenic | 40.0% | |
| CTCTAGTCCATTGTGCAAAT+TGG | + | tig0018025:70399-70418 | Msa1363030:intron | 40.0% | |
| AGGCAAACCAATTTGCACAA+TGG | - | tig0018025:70409-70428 | None:intergenic | 40.0% | |
| TCGGAATCGCTTCTTTGATA+TGG | - | tig0018025:70541-70560 | None:intergenic | 40.0% | |
| !!! | AGGTTTTTTTGGAGCAGAGT+CGG | - | tig0018025:70560-70579 | None:intergenic | 40.0% |
| ! | AAGTATGGAGTGGATTCAGT+AGG | - | tig0018025:70580-70599 | None:intergenic | 40.0% |
| !!! | GTTTTTTGGTGTCACGTTTG+TGG | - | tig0018025:69226-69245 | None:intergenic | 40.0% |
| ACCAAAAAACGTTACACCTG+TGG | + | tig0018025:69236-69255 | Msa1363030:CDS | 40.0% | |
| !!! | TCCACAGGTGTAACGTTTTT+TGG | - | tig0018025:69240-69259 | None:intergenic | 40.0% |
| GCAATGGGGCAAAACAAAAA+TGG | - | tig0018025:69320-69339 | None:intergenic | 40.0% | |
| AATGTCAACTGTGCAGTTTC+CGG | - | tig0018025:69431-69450 | None:intergenic | 40.0% | |
| ! | TTTTCCTGCTGACAAAGTTG+AGG | + | tig0018025:69484-69503 | Msa1363030:CDS | 40.0% |
| CATTTGCAAGCACTCAAACT+CGG | + | tig0018025:69516-69535 | Msa1363030:CDS | 40.0% | |
| CAATTACCAGTTAGTGTAGG+AGG | - | tig0018025:69575-69594 | None:intergenic | 40.0% | |
| GAGCAATTACCAGTTAGTGT+AGG | - | tig0018025:69578-69597 | None:intergenic | 40.0% | |
| AGCTTCACTTCTTCGATTCA+TGG | + | tig0018025:69722-69741 | Msa1363030:CDS | 40.0% | |
| ATAGACAGAGACATGGAGAA+GGG | - | tig0018025:69872-69891 | None:intergenic | 40.0% | |
| ATCAAGGATAGACAGAGACA+TGG | - | tig0018025:69879-69898 | None:intergenic | 40.0% | |
| CAAGCAAAATCAAGGACTTC+CGG | + | tig0018025:70013-70032 | Msa1363030:intron | 40.0% | |
| CACTATTTATGTTCCTCTCG+TGG | - | tig0018025:70081-70100 | None:intergenic | 40.0% | |
| TTGTGCTCATGCTCTTACAA+GGG | - | tig0018025:70107-70126 | None:intergenic | 40.0% | |
| !!! | TTCGTGTTGTTTTCACGGTA+CGG | - | tig0018025:70141-70160 | None:intergenic | 40.0% |
| TCTAGTAACACAAGTGGCTT+TGG | - | tig0018025:70331-70350 | None:intergenic | 40.0% | |
| CTCTAGTCCATTGTGCAAAT+TGG | + | tig0018025:70399-70418 | Msa1363030:intron | 40.0% | |
| AGGCAAACCAATTTGCACAA+TGG | - | tig0018025:70409-70428 | None:intergenic | 40.0% | |
| TCGGAATCGCTTCTTTGATA+TGG | - | tig0018025:70541-70560 | None:intergenic | 40.0% | |
| !!! | AGGTTTTTTTGGAGCAGAGT+CGG | - | tig0018025:70560-70579 | None:intergenic | 40.0% |
| ! | AAGTATGGAGTGGATTCAGT+AGG | - | tig0018025:70580-70599 | None:intergenic | 40.0% |
| CTTGGAGACAAAGAATCCAC+AGG | - | tig0018025:69255-69274 | None:intergenic | 45.0% | |
| CTGTGGATTCTTTGTCTCCA+AGG | + | tig0018025:69253-69272 | Msa1363030:CDS | 45.0% | |
| GGTGGTTGAAGACTCATATC+AGG | - | tig0018025:69554-69573 | None:intergenic | 45.0% | |
| TTACCAGTTAGTGTAGGAGG+TGG | - | tig0018025:69572-69591 | None:intergenic | 45.0% | |
| TCATGGAGAAAAGGAAAGCC+AGG | + | tig0018025:69739-69758 | Msa1363030:CDS | 45.0% | |
| ! | ATTTGTCTGAGAGGCATACC+TGG | - | tig0018025:69760-69779 | None:intergenic | 45.0% |
| GATAGACAGAGACATGGAGA+AGG | - | tig0018025:69873-69892 | None:intergenic | 45.0% | |
| ! | CTTGATTTTGCTTGCGTCGA+AGG | - | tig0018025:70007-70026 | None:intergenic | 45.0% |
| CTTCGACGCAAGCAAAATCA+AGG | + | tig0018025:70005-70024 | Msa1363030:intron | 45.0% | |
| TCATAGTCAAGAACCACGAG+AGG | + | tig0018025:70065-70084 | Msa1363030:intron | 45.0% | |
| GTTGTGCTCATGCTCTTACA+AGG | - | tig0018025:70108-70127 | None:intergenic | 45.0% | |
| TCAGCAAGCCTAGAATTGGA+TGG | - | tig0018025:70304-70323 | None:intergenic | 45.0% | |
| CTCTTCAGCAAGCCTAGAAT+TGG | - | tig0018025:70308-70327 | None:intergenic | 45.0% | |
| TAGGCCAAACAACATCACTC+AGG | - | tig0018025:70456-70475 | None:intergenic | 45.0% | |
| CTTGGAGACAAAGAATCCAC+AGG | - | tig0018025:69255-69274 | None:intergenic | 45.0% | |
| CTGTGGATTCTTTGTCTCCA+AGG | + | tig0018025:69253-69272 | Msa1363030:CDS | 45.0% | |
| GGTGGTTGAAGACTCATATC+AGG | - | tig0018025:69554-69573 | None:intergenic | 45.0% | |
| TTACCAGTTAGTGTAGGAGG+TGG | - | tig0018025:69572-69591 | None:intergenic | 45.0% | |
| TCATGGAGAAAAGGAAAGCC+AGG | + | tig0018025:69739-69758 | Msa1363030:CDS | 45.0% | |
| ! | ATTTGTCTGAGAGGCATACC+TGG | - | tig0018025:69760-69779 | None:intergenic | 45.0% |
| GATAGACAGAGACATGGAGA+AGG | - | tig0018025:69873-69892 | None:intergenic | 45.0% | |
| ! | CTTGATTTTGCTTGCGTCGA+AGG | - | tig0018025:70007-70026 | None:intergenic | 45.0% |
| CTTCGACGCAAGCAAAATCA+AGG | + | tig0018025:70005-70024 | Msa1363030:intron | 45.0% | |
| TCATAGTCAAGAACCACGAG+AGG | + | tig0018025:70065-70084 | Msa1363030:intron | 45.0% | |
| GTTGTGCTCATGCTCTTACA+AGG | - | tig0018025:70108-70127 | None:intergenic | 45.0% | |
| TCAGCAAGCCTAGAATTGGA+TGG | - | tig0018025:70304-70323 | None:intergenic | 45.0% | |
| CTCTTCAGCAAGCCTAGAAT+TGG | - | tig0018025:70308-70327 | None:intergenic | 45.0% | |
| TAGGCCAAACAACATCACTC+AGG | - | tig0018025:70456-70475 | None:intergenic | 45.0% | |
| AGCTCCTCAACTTTGTCAGC+AGG | - | tig0018025:69491-69510 | None:intergenic | 50.0% | |
| CAACCACCTCCTACACTAAC+TGG | + | tig0018025:69566-69585 | Msa1363030:CDS | 50.0% | |
| AGCTCCTCAACTTTGTCAGC+AGG | - | tig0018025:69491-69510 | None:intergenic | 50.0% | |
| CAACCACCTCCTACACTAAC+TGG | + | tig0018025:69566-69585 | Msa1363030:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018025 | gene | 69210 | 70606 | 69210 | ID=Msa1363030;Name=Msa1363030 |
| tig0018025 | mRNA | 69210 | 70606 | 69210 | ID=Msa1363030-mRNA-1;Parent=Msa1363030;Name=Msa1363030-mRNA-1;_AED=0.33;_eAED=0.34;_QI=0|0|0|0.75|1|1|4|0|131 |
| tig0018025 | exon | 69210 | 69274 | 69210 | ID=Msa1363030-mRNA-1:exon:13342;Parent=Msa1363030-mRNA-1 |
| tig0018025 | exon | 69403 | 69587 | 69403 | ID=Msa1363030-mRNA-1:exon:13343;Parent=Msa1363030-mRNA-1 |
| tig0018025 | exon | 69700 | 69760 | 69700 | ID=Msa1363030-mRNA-1:exon:13344;Parent=Msa1363030-mRNA-1 |
| tig0018025 | exon | 70522 | 70606 | 70522 | ID=Msa1363030-mRNA-1:exon:13345;Parent=Msa1363030-mRNA-1 |
| tig0018025 | CDS | 69210 | 69274 | 69210 | ID=Msa1363030-mRNA-1:cds;Parent=Msa1363030-mRNA-1 |
| tig0018025 | CDS | 69403 | 69587 | 69403 | ID=Msa1363030-mRNA-1:cds;Parent=Msa1363030-mRNA-1 |
| tig0018025 | CDS | 69700 | 69760 | 69700 | ID=Msa1363030-mRNA-1:cds;Parent=Msa1363030-mRNA-1 |
| tig0018025 | CDS | 70522 | 70606 | 70522 | ID=Msa1363030-mRNA-1:cds;Parent=Msa1363030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
