Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364750 | XP_039683937.1 | 86.131 | 411 | 9 | 1 | 74 | 436 | 375 | 785 | 0.0 | 730 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364750 | sp|Q9SWG3|FAR1_ARATH | 37.333 | 300 | 184 | 3 | 140 | 436 | 122 | 420 | 1.24e-66 | 230 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364750 | Q2HSZ7 | 86.683 | 398 | 5 | 1 | 87 | 436 | 318 | 715 | 0.0 | 712 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1364750 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364750 | MtrunA17_Chr2g0296781 | 79.624 | 319 | 65 | 0 | 118 | 436 | 42 | 360 | 0.0 | 562 |
| Msa1364750 | MtrunA17_Chr6g0477261 | 87.097 | 248 | 32 | 0 | 189 | 436 | 2 | 249 | 2.89e-162 | 472 |
| Msa1364750 | MtrunA17_Chr1g0196541 | 64.577 | 319 | 113 | 0 | 118 | 436 | 42 | 360 | 1.77e-153 | 452 |
| Msa1364750 | MtrunA17_Chr5g0441581 | 50.943 | 318 | 148 | 1 | 119 | 436 | 79 | 388 | 1.63e-112 | 345 |
| Msa1364750 | MtrunA17_Chr1g0202341 | 38.871 | 319 | 188 | 5 | 121 | 436 | 105 | 419 | 8.62e-75 | 247 |
| Msa1364750 | MtrunA17_Chr2g0291581 | 41.077 | 297 | 165 | 2 | 140 | 436 | 138 | 424 | 1.20e-73 | 244 |
| Msa1364750 | MtrunA17_Chr2g0291591 | 36.027 | 297 | 190 | 0 | 140 | 436 | 131 | 427 | 1.12e-71 | 236 |
| Msa1364750 | MtrunA17_Chr5g0448761 | 37.855 | 317 | 188 | 7 | 127 | 436 | 121 | 435 | 1.82e-68 | 232 |
| Msa1364750 | MtrunA17_Chr2g0329031 | 35.987 | 314 | 184 | 3 | 129 | 436 | 71 | 373 | 1.48e-66 | 226 |
| Msa1364750 | MtrunA17_Chr1g0207551 | 36.577 | 298 | 188 | 1 | 140 | 436 | 103 | 400 | 1.36e-65 | 224 |
| Msa1364750 | MtrunA17_Chr8g0363841 | 37.333 | 300 | 183 | 3 | 140 | 436 | 88 | 385 | 5.47e-62 | 212 |
| Msa1364750 | MtrunA17_Chr3g0080351 | 35.647 | 317 | 180 | 4 | 121 | 436 | 141 | 434 | 2.60e-59 | 207 |
| Msa1364750 | MtrunA17_Chr2g0324011 | 33.000 | 300 | 198 | 3 | 139 | 436 | 80 | 378 | 4.76e-55 | 192 |
| Msa1364750 | MtrunA17_Chr2g0287651 | 32.776 | 299 | 195 | 3 | 140 | 436 | 147 | 441 | 2.76e-52 | 188 |
| Msa1364750 | MtrunA17_Chr5g0440451 | 31.667 | 360 | 206 | 9 | 105 | 436 | 69 | 416 | 9.41e-51 | 184 |
| Msa1364750 | MtrunA17_Chr5g0448511 | 39.904 | 208 | 123 | 2 | 230 | 436 | 1 | 207 | 5.47e-50 | 177 |
| Msa1364750 | MtrunA17_Chr3g0118611 | 41.206 | 199 | 110 | 2 | 242 | 436 | 118 | 313 | 2.76e-48 | 176 |
| Msa1364750 | MtrunA17_Chr1g0203721 | 31.290 | 310 | 203 | 4 | 134 | 436 | 128 | 434 | 1.52e-46 | 172 |
| Msa1364750 | MtrunA17_Chr1g0203051 | 28.931 | 318 | 218 | 5 | 121 | 436 | 132 | 443 | 1.61e-46 | 169 |
| Msa1364750 | MtrunA17_Chr1g0198761 | 31.672 | 341 | 215 | 9 | 103 | 430 | 85 | 420 | 7.60e-45 | 166 |
| Msa1364750 | MtrunA17_Chr2g0287061 | 31.077 | 325 | 185 | 6 | 118 | 436 | 222 | 513 | 1.59e-44 | 166 |
| Msa1364750 | MtrunA17_Chr6g0458391 | 29.450 | 309 | 196 | 5 | 131 | 436 | 287 | 576 | 1.70e-43 | 162 |
| Msa1364750 | MtrunA17_Chr5g0431001 | 30.508 | 354 | 213 | 11 | 100 | 430 | 91 | 434 | 5.07e-43 | 158 |
| Msa1364750 | MtrunA17_Chr1g0164591 | 32.770 | 296 | 179 | 10 | 149 | 436 | 1 | 284 | 1.21e-42 | 153 |
| Msa1364750 | MtrunA17_Chr2g0276841 | 30.211 | 331 | 207 | 9 | 119 | 433 | 119 | 441 | 7.87e-41 | 154 |
| Msa1364750 | MtrunA17_Chr7g0258861 | 35.714 | 210 | 132 | 2 | 139 | 345 | 80 | 289 | 2.09e-40 | 146 |
| Msa1364750 | MtrunA17_Chr3g0082121 | 33.770 | 305 | 180 | 11 | 140 | 436 | 114 | 404 | 4.92e-39 | 149 |
| Msa1364750 | MtrunA17_Chr2g0294841 | 31.502 | 273 | 181 | 5 | 166 | 434 | 150 | 420 | 4.79e-38 | 146 |
| Msa1364750 | MtrunA17_Chr2g0290391 | 24.522 | 314 | 210 | 10 | 138 | 430 | 120 | 427 | 9.65e-25 | 107 |
| Msa1364750 | MtrunA17_Chr6g0451441 | 29.134 | 127 | 88 | 1 | 108 | 234 | 123 | 247 | 8.35e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364750 | AT4G15090.1 | 37.333 | 300 | 184 | 3 | 140 | 436 | 122 | 420 | 1.27e-67 | 230 |
| Msa1364750 | AT4G15090.5 | 37.333 | 300 | 184 | 3 | 140 | 436 | 122 | 420 | 1.27e-67 | 230 |
| Msa1364750 | AT4G15090.3 | 37.333 | 300 | 184 | 3 | 140 | 436 | 122 | 420 | 1.27e-67 | 230 |
| Msa1364750 | AT4G15090.2 | 37.333 | 300 | 184 | 3 | 140 | 436 | 122 | 420 | 1.27e-67 | 230 |
| Msa1364750 | AT4G15090.4 | 37.333 | 300 | 184 | 3 | 140 | 436 | 122 | 420 | 1.27e-67 | 230 |
| Msa1364750 | AT4G38180.1 | 35.873 | 315 | 193 | 4 | 127 | 436 | 134 | 444 | 3.10e-66 | 226 |
| Msa1364750 | AT1G76320.3 | 35.514 | 321 | 196 | 4 | 119 | 436 | 45 | 357 | 1.47e-59 | 206 |
| Msa1364750 | AT1G76320.2 | 35.514 | 321 | 196 | 4 | 119 | 436 | 45 | 357 | 2.93e-59 | 206 |
| Msa1364750 | AT1G76320.1 | 35.514 | 321 | 196 | 4 | 119 | 436 | 45 | 357 | 3.50e-59 | 206 |
| Msa1364750 | AT1G76320.4 | 35.514 | 321 | 196 | 4 | 119 | 436 | 45 | 357 | 3.50e-59 | 206 |
| Msa1364750 | AT1G52520.1 | 35.786 | 299 | 180 | 4 | 140 | 436 | 152 | 440 | 7.54e-59 | 205 |
| Msa1364750 | AT1G80010.1 | 34.211 | 304 | 189 | 5 | 140 | 434 | 162 | 463 | 2.06e-57 | 201 |
| Msa1364750 | AT3G22170.2 | 33.438 | 317 | 188 | 3 | 121 | 436 | 135 | 429 | 3.24e-57 | 202 |
| Msa1364750 | AT3G22170.1 | 33.438 | 317 | 188 | 3 | 121 | 436 | 135 | 429 | 3.24e-57 | 202 |
| Msa1364750 | AT2G27110.2 | 36.913 | 298 | 170 | 7 | 143 | 436 | 108 | 391 | 9.80e-55 | 195 |
| Msa1364750 | AT2G27110.1 | 36.913 | 298 | 170 | 7 | 143 | 436 | 108 | 391 | 9.80e-55 | 195 |
| Msa1364750 | AT2G27110.3 | 38.843 | 242 | 137 | 4 | 197 | 436 | 14 | 246 | 1.19e-51 | 185 |
| Msa1364750 | AT2G32250.5 | 42.857 | 189 | 107 | 1 | 249 | 436 | 176 | 364 | 1.33e-48 | 177 |
| Msa1364750 | AT2G32250.8 | 42.857 | 189 | 107 | 1 | 249 | 436 | 135 | 323 | 1.60e-48 | 177 |
| Msa1364750 | AT2G32250.7 | 42.857 | 189 | 107 | 1 | 249 | 436 | 135 | 323 | 1.67e-48 | 177 |
| Msa1364750 | AT2G32250.2 | 42.857 | 189 | 107 | 1 | 249 | 436 | 176 | 364 | 1.84e-48 | 177 |
| Msa1364750 | AT2G32250.4 | 42.857 | 189 | 107 | 1 | 249 | 436 | 176 | 364 | 1.84e-48 | 177 |
| Msa1364750 | AT2G32250.6 | 42.857 | 189 | 107 | 1 | 249 | 436 | 176 | 364 | 1.84e-48 | 177 |
| Msa1364750 | AT2G32250.1 | 42.857 | 189 | 107 | 1 | 249 | 436 | 176 | 364 | 1.84e-48 | 177 |
| Msa1364750 | AT2G32250.3 | 42.857 | 189 | 107 | 1 | 249 | 436 | 176 | 364 | 1.84e-48 | 177 |
| Msa1364750 | AT3G06250.2 | 30.938 | 320 | 189 | 6 | 118 | 436 | 229 | 517 | 3.70e-46 | 170 |
| Msa1364750 | AT3G06250.1 | 30.938 | 320 | 189 | 6 | 118 | 436 | 229 | 517 | 3.70e-46 | 170 |
| Msa1364750 | AT3G06250.3 | 30.938 | 320 | 189 | 6 | 118 | 436 | 229 | 517 | 3.70e-46 | 170 |
| Msa1364750 | AT5G18960.2 | 31.889 | 323 | 185 | 7 | 118 | 436 | 250 | 541 | 3.77e-45 | 167 |
| Msa1364750 | AT5G18960.1 | 31.889 | 323 | 185 | 7 | 118 | 436 | 250 | 541 | 3.77e-45 | 167 |
| Msa1364750 | AT4G19990.1 | 40.865 | 208 | 117 | 4 | 232 | 436 | 107 | 311 | 9.97e-45 | 166 |
| Msa1364750 | AT4G19990.5 | 40.865 | 208 | 117 | 4 | 232 | 436 | 164 | 368 | 1.39e-44 | 166 |
| Msa1364750 | AT4G19990.7 | 40.865 | 208 | 117 | 4 | 232 | 436 | 178 | 382 | 1.42e-44 | 166 |
| Msa1364750 | AT4G19990.3 | 40.865 | 208 | 117 | 4 | 232 | 436 | 164 | 368 | 1.44e-44 | 166 |
| Msa1364750 | AT4G19990.4 | 40.865 | 208 | 117 | 4 | 232 | 436 | 164 | 368 | 1.44e-44 | 166 |
| Msa1364750 | AT4G19990.6 | 40.865 | 208 | 117 | 4 | 232 | 436 | 164 | 368 | 2.13e-44 | 165 |
| Msa1364750 | AT4G19990.2 | 40.865 | 208 | 117 | 4 | 232 | 436 | 164 | 368 | 2.13e-44 | 165 |
| Msa1364750 | AT4G38170.1 | 37.255 | 204 | 116 | 4 | 238 | 436 | 13 | 209 | 1.46e-39 | 149 |
| Msa1364750 | AT1G10240.2 | 29.316 | 307 | 196 | 8 | 140 | 433 | 121 | 419 | 4.48e-36 | 141 |
| Msa1364750 | AT1G10240.1 | 29.316 | 307 | 196 | 8 | 140 | 433 | 121 | 419 | 4.48e-36 | 141 |
| Msa1364750 | AT5G28530.1 | 24.675 | 308 | 201 | 7 | 146 | 425 | 122 | 426 | 2.89e-27 | 115 |
| Msa1364750 | AT5G28530.3 | 24.675 | 308 | 201 | 7 | 146 | 425 | 122 | 426 | 3.09e-27 | 115 |
| Msa1364750 | AT5G28530.2 | 24.675 | 308 | 201 | 7 | 146 | 425 | 122 | 426 | 3.09e-27 | 115 |
| Msa1364750 | AT5G28530.4 | 30.435 | 115 | 73 | 3 | 315 | 425 | 252 | 363 | 3.69e-12 | 68.9 |
| Msa1364750 | AT5G28530.5 | 30.435 | 115 | 73 | 3 | 315 | 425 | 252 | 363 | 3.70e-12 | 68.9 |
Find 71 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATCTTGGTCAGTAATTA+TGG | 0.209922 | tig0018186:+71586 | None:intergenic |
| GTCGTTTGCGAAATGTATTC+TGG | 0.220344 | tig0018186:-71838 | Msa1364750:CDS |
| CACCATCGATGGCGAGCTTT+TGG | 0.238537 | tig0018186:+71533 | None:intergenic |
| TTCGAGCATATCTGATTTCA+TGG | 0.264868 | tig0018186:-71414 | Msa1364750:CDS |
| CCTTCTTCATTGCTCTATCT+TGG | 0.275947 | tig0018186:+71573 | None:intergenic |
| CCGTATCCTCATTCGACAAT+AGG | 0.297761 | tig0018186:+71669 | None:intergenic |
| TTTGTGGCATTTAATGAAAA+AGG | 0.306478 | tig0018186:-71510 | Msa1364750:CDS |
| AAAAGAAGAGAGGAGAAATA+TGG | 0.309534 | tig0018186:+73176 | None:intergenic |
| AAGCAGAAATTTCCGATCTA+TGG | 0.310416 | tig0018186:-72041 | Msa1364750:CDS |
| AGGGCTGCTTATGAGTATTT+TGG | 0.315150 | tig0018186:-71800 | Msa1364750:CDS |
| AGCCATACACTGTGCTCTTA+TGG | 0.342605 | tig0018186:+72234 | None:intergenic |
| GGATATGATAATCTTACATT+TGG | 0.343496 | tig0018186:-72004 | Msa1364750:CDS |
| TGTGCTCTTATGGTAGGATT+TGG | 0.353524 | tig0018186:+72244 | None:intergenic |
| CGTATCCTCATTCGACAATA+GGG | 0.366937 | tig0018186:+71670 | None:intergenic |
| AATATGTCTATGTCTTTAGA+TGG | 0.377645 | tig0018186:-72205 | Msa1364750:CDS |
| ATTTGGACCCTCATACAAAA+AGG | 0.378123 | tig0018186:-72099 | Msa1364750:CDS |
| GTGGAATTGAATGTTGAAAC+AGG | 0.386950 | tig0018186:+72683 | None:intergenic |
| TGGTCAGTAATTATGGCATT+TGG | 0.404502 | tig0018186:+71593 | None:intergenic |
| ATATTTATTTGTTAAATAAG+TGG | 0.416959 | tig0018186:+71757 | None:intergenic |
| TTATGTGATCAACCTCCTCT+TGG | 0.424715 | tig0018186:+72508 | None:intergenic |
| CATGATAATGAATGGTTGTA+AGG | 0.443131 | tig0018186:-71356 | None:intergenic |
| GTTGCTCTTGAGCATAATCA+TGG | 0.447972 | tig0018186:-72163 | Msa1364750:CDS |
| TGGTAGGATTTGGTTTCAAA+AGG | 0.448606 | tig0018186:+72254 | None:intergenic |
| CTCGCCATCGATGGTGTTTG+TGG | 0.452930 | tig0018186:-71526 | Msa1364750:CDS |
| TGATGATTGACTCCAACAAA+AGG | 0.455391 | tig0018186:+71719 | None:intergenic |
| GAAGCAAATATTGTTCAAGC+AGG | 0.462377 | tig0018186:-72462 | Msa1364750:intron |
| AAATTATTCTTACTTGCTTG+TGG | 0.469619 | tig0018186:+72664 | None:intergenic |
| ACTCCAACAAAAGGGGCAAA+AGG | 0.489968 | tig0018186:+71728 | None:intergenic |
| TACCATAAGAGCACAGTGTA+TGG | 0.490683 | tig0018186:-72236 | Msa1364750:CDS |
| TCTGGGTAGATGCGAGATGT+AGG | 0.494755 | tig0018186:-71820 | Msa1364750:CDS |
| TCGTTTGCGAAATGTATTCT+GGG | 0.501285 | tig0018186:-71837 | Msa1364750:CDS |
| TCTATGGTTGTTGAAGCAAA+TGG | 0.501556 | tig0018186:-72025 | Msa1364750:CDS |
| CCTATTGTCGAATGAGGATA+CGG | 0.509576 | tig0018186:-71669 | Msa1364750:CDS |
| GATGATTGACTCCAACAAAA+GGG | 0.511990 | tig0018186:+71720 | None:intergenic |
| CTGGGTAGATGCGAGATGTA+GGG | 0.525010 | tig0018186:-71819 | Msa1364750:CDS |
| AAAGCAAGACGGCTTCCACT+TGG | 0.525234 | tig0018186:-71953 | Msa1364750:CDS |
| CGCTGTTGTATTCACCGCCA+CGG | 0.531935 | tig0018186:-72778 | Msa1364750:CDS |
| AGCAATGAAGAAGGCAATTG+AGG | 0.534217 | tig0018186:-71564 | Msa1364750:CDS |
| AGACGGCTTCCACTTGGGAT+AGG | 0.537811 | tig0018186:-71947 | Msa1364750:CDS |
| AAGCAAGACGGCTTCCACTT+GGG | 0.540758 | tig0018186:-71952 | Msa1364750:CDS |
| GGTGAATACAACAGCGGCGA+TGG | 0.541955 | tig0018186:+72785 | None:intergenic |
| AGTAAAGTGATGTTTGAGGA+TGG | 0.543909 | tig0018186:+72714 | None:intergenic |
| TCAAAGTAAAGTGATGTTTG+AGG | 0.547191 | tig0018186:+72710 | None:intergenic |
| TTCCAAAAGCTCGCCATCGA+TGG | 0.547197 | tig0018186:-71535 | Msa1364750:CDS |
| CCAAGATAGAGCAATGAAGA+AGG | 0.549366 | tig0018186:-71573 | Msa1364750:CDS |
| CAGACAACAACGGCGACGAA+AGG | 0.551224 | tig0018186:+72813 | None:intergenic |
| TTGCTTCAACAACCATAGAT+CGG | 0.559940 | tig0018186:+72029 | None:intergenic |
| TTTCTTGGCTGTTCAAAACA+TGG | 0.566689 | tig0018186:-71640 | Msa1364750:CDS |
| TTCAAAATCGAAAAGAAGAG+AGG | 0.567717 | tig0018186:+73166 | None:intergenic |
| TACTTCTTCTGTCCAAGAGG+AGG | 0.573867 | tig0018186:-72520 | Msa1364750:CDS |
| TATCTGATTTCATGGAGAAG+TGG | 0.590848 | tig0018186:-71406 | Msa1364750:CDS |
| ATACACTGTGCTCTTATGGT+AGG | 0.596198 | tig0018186:+72238 | None:intergenic |
| TTGTGCCCTATTGTCGAATG+AGG | 0.600198 | tig0018186:-71675 | Msa1364750:CDS |
| TTAGATATTAATGATCAAGC+TGG | 0.603736 | tig0018186:-72073 | Msa1364750:CDS |
| CAACGGCGACGAAAGGACAA+AGG | 0.617082 | tig0018186:+72820 | None:intergenic |
| TTTGTTGGAGTCAATCATCA+CGG | 0.624437 | tig0018186:-71716 | Msa1364750:CDS |
| ATGATTGACTCCAACAAAAG+GGG | 0.626051 | tig0018186:+71721 | None:intergenic |
| ATGATAATGAATGGTTGTAA+GGG | 0.634144 | tig0018186:-71355 | None:intergenic |
| ACATGGTTAGAATGCATGCA+TGG | 0.634260 | tig0018186:-71623 | Msa1364750:CDS |
| TCAGCATCTCCTATCCCAAG+TGG | 0.637487 | tig0018186:+71938 | None:intergenic |
| AATGCCACAAACACCATCGA+TGG | 0.638359 | tig0018186:+71522 | None:intergenic |
| ACGAACTGCATGATAATGAA+TGG | 0.646085 | tig0018186:-71364 | Msa1364750:CDS |
| TAGTTGTGCGGCGAGAACCG+TGG | 0.647045 | tig0018186:+72761 | None:intergenic |
| ATCTACTTCTTCTGTCCAAG+AGG | 0.647824 | tig0018186:-72523 | Msa1364750:CDS |
| GGAATTGAATGTTGAAACAG+GGG | 0.654531 | tig0018186:+72685 | None:intergenic |
| TGGAATTGAATGTTGAAACA+GGG | 0.655246 | tig0018186:+72684 | None:intergenic |
| ATTACATTGACAAAGCAAGA+CGG | 0.657095 | tig0018186:-71964 | Msa1364750:CDS |
| GATATGCAGTTATAGTTGTG+CGG | 0.693838 | tig0018186:+72749 | None:intergenic |
| TTGTGCGGCGAGAACCGTGG+CGG | 0.697644 | tig0018186:+72764 | None:intergenic |
| GATGGTAGAGCAGACAACAA+CGG | 0.709353 | tig0018186:+72803 | None:intergenic |
| CGTGGCGGTGAATACAACAG+CGG | 0.778646 | tig0018186:+72779 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTATTTGTTAAATAAG+TGG | + | tig0018186:72795-72814 | None:intergenic | 10.0% |
| !!! | ATATTTATTTGTTAAATAAG+TGG | + | tig0018186:72795-72814 | None:intergenic | 10.0% |
| !! | CAAAATCATTAAGAATAAAA+AGG | + | tig0018186:71610-71629 | None:intergenic | 15.0% |
| !! | AAAAAAAAATACTTTACTCT+AGG | - | tig0018186:72233-72252 | Msa1364750:CDS | 15.0% |
| !!! | TAAAATATCTAGATTTTGTT+GGG | + | tig0018186:72418-72437 | None:intergenic | 15.0% |
| !! | CAAAATCATTAAGAATAAAA+AGG | + | tig0018186:71610-71629 | None:intergenic | 15.0% |
| !! | AAAAAAAAATACTTTACTCT+AGG | - | tig0018186:72233-72252 | Msa1364750:CDS | 15.0% |
| !!! | TAAAATATCTAGATTTTGTT+GGG | + | tig0018186:72418-72437 | None:intergenic | 15.0% |
| !! | GTTTCTTTGTTAAAATAATG+TGG | - | tig0018186:71449-71468 | Msa1364750:CDS | 20.0% |
| !! | TAATCAACTAAATTAACAAG+TGG | + | tig0018186:71960-71979 | None:intergenic | 20.0% |
| !! | AATCAATTCAAAAAATGCAA+AGG | - | tig0018186:72206-72225 | Msa1364750:CDS | 20.0% |
| !!! | CTAAAATATCTAGATTTTGT+TGG | + | tig0018186:72419-72438 | None:intergenic | 20.0% |
| !!! | TTTTAGATGCAATAAGAATT+TGG | - | tig0018186:72433-72452 | Msa1364750:intron | 20.0% |
| !!! | TAGTCAATTTTATTATGTGA+TGG | - | tig0018186:72673-72692 | Msa1364750:intron | 20.0% |
| !! | GTTTCTTTGTTAAAATAATG+TGG | - | tig0018186:71449-71468 | Msa1364750:CDS | 20.0% |
| !! | TAATCAACTAAATTAACAAG+TGG | + | tig0018186:71960-71979 | None:intergenic | 20.0% |
| !! | AATCAATTCAAAAAATGCAA+AGG | - | tig0018186:72206-72225 | Msa1364750:CDS | 20.0% |
| !!! | CTAAAATATCTAGATTTTGT+TGG | + | tig0018186:72419-72438 | None:intergenic | 20.0% |
| !!! | TTTTAGATGCAATAAGAATT+TGG | - | tig0018186:72433-72452 | Msa1364750:intron | 20.0% |
| !!! | TAGTCAATTTTATTATGTGA+TGG | - | tig0018186:72673-72692 | Msa1364750:intron | 20.0% |
| ! | AAATTATTCTTACTTGCTTG+TGG | + | tig0018186:71888-71907 | None:intergenic | 25.0% |
| ! | ACAAGCAAGTAAGAATAATT+TGG | - | tig0018186:71887-71906 | Msa1364750:CDS | 25.0% |
| !! | TGTAAAATTTTCTGCATTAG+TGG | - | tig0018186:71996-72015 | Msa1364750:CDS | 25.0% |
| ! | AATTCAAAAAATGCAAAGGA+TGG | - | tig0018186:72210-72229 | Msa1364750:CDS | 25.0% |
| ! | AATATGTCTATGTCTTTAGA+TGG | - | tig0018186:72344-72363 | Msa1364750:intron | 25.0% |
| ! | TTAGATATTAATGATCAAGC+TGG | - | tig0018186:72476-72495 | Msa1364750:CDS | 25.0% |
| ! | GGATATGATAATCTTACATT+TGG | - | tig0018186:72545-72564 | Msa1364750:CDS | 25.0% |
| !!! | ATTTTATTATGTGATGGATG+TGG | - | tig0018186:72679-72698 | Msa1364750:CDS | 25.0% |
| ! | TTTGTGGCATTTAATGAAAA+AGG | - | tig0018186:73039-73058 | Msa1364750:intron | 25.0% |
| ! | AAATTATTCTTACTTGCTTG+TGG | + | tig0018186:71888-71907 | None:intergenic | 25.0% |
| ! | ACAAGCAAGTAAGAATAATT+TGG | - | tig0018186:71887-71906 | Msa1364750:CDS | 25.0% |
| !! | TGTAAAATTTTCTGCATTAG+TGG | - | tig0018186:71996-72015 | Msa1364750:CDS | 25.0% |
| ! | AATTCAAAAAATGCAAAGGA+TGG | - | tig0018186:72210-72229 | Msa1364750:CDS | 25.0% |
| ! | AATATGTCTATGTCTTTAGA+TGG | - | tig0018186:72344-72363 | Msa1364750:intron | 25.0% |
| ! | TTAGATATTAATGATCAAGC+TGG | - | tig0018186:72476-72495 | Msa1364750:CDS | 25.0% |
| ! | GGATATGATAATCTTACATT+TGG | - | tig0018186:72545-72564 | Msa1364750:CDS | 25.0% |
| !!! | ATTTTATTATGTGATGGATG+TGG | - | tig0018186:72679-72698 | Msa1364750:CDS | 25.0% |
| ! | TTTGTGGCATTTAATGAAAA+AGG | - | tig0018186:73039-73058 | Msa1364750:intron | 25.0% |
| AAAAGAAGAGAGGAGAAATA+TGG | + | tig0018186:71376-71395 | None:intergenic | 30.0% | |
| TTCAAAATCGAAAAGAAGAG+AGG | + | tig0018186:71386-71405 | None:intergenic | 30.0% | |
| ! | TTCTTTTCGATTTTGAACTC+TGG | - | tig0018186:71389-71408 | Msa1364750:CDS | 30.0% |
| TCAAAGTAAAGTGATGTTTG+AGG | + | tig0018186:71842-71861 | None:intergenic | 30.0% | |
| TGGAATTGAATGTTGAAACA+GGG | + | tig0018186:71868-71887 | None:intergenic | 30.0% | |
| ! | ATTTTCTGCATTAGTGGAAA+CGG | - | tig0018186:72002-72021 | Msa1364750:CDS | 30.0% |
| ATTACATTGACAAAGCAAGA+CGG | - | tig0018186:72585-72604 | Msa1364750:intron | 30.0% | |
| TCTATCTTGGTCAGTAATTA+TGG | + | tig0018186:72966-72985 | None:intergenic | 30.0% | |
| GCATTTAATGAAAAAGGTTC+CGG | - | tig0018186:73045-73064 | Msa1364750:intron | 30.0% | |
| AAAAGAAGAGAGGAGAAATA+TGG | + | tig0018186:71376-71395 | None:intergenic | 30.0% | |
| TTCAAAATCGAAAAGAAGAG+AGG | + | tig0018186:71386-71405 | None:intergenic | 30.0% | |
| ! | TTCTTTTCGATTTTGAACTC+TGG | - | tig0018186:71389-71408 | Msa1364750:CDS | 30.0% |
| TCAAAGTAAAGTGATGTTTG+AGG | + | tig0018186:71842-71861 | None:intergenic | 30.0% | |
| TGGAATTGAATGTTGAAACA+GGG | + | tig0018186:71868-71887 | None:intergenic | 30.0% | |
| ! | ATTTTCTGCATTAGTGGAAA+CGG | - | tig0018186:72002-72021 | Msa1364750:CDS | 30.0% |
| ATTACATTGACAAAGCAAGA+CGG | - | tig0018186:72585-72604 | Msa1364750:intron | 30.0% | |
| TCTATCTTGGTCAGTAATTA+TGG | + | tig0018186:72966-72985 | None:intergenic | 30.0% | |
| GCATTTAATGAAAAAGGTTC+CGG | - | tig0018186:73045-73064 | Msa1364750:intron | 30.0% | |
| ! | ATTTTGAACTCTGGTTGAAG+AGG | - | tig0018186:71398-71417 | Msa1364750:CDS | 35.0% |
| ! | TTTTGAACTCTGGTTGAAGA+GGG | - | tig0018186:71399-71418 | Msa1364750:CDS | 35.0% |
| TGAGATCAATCAATAAGTGG+CGG | + | tig0018186:71693-71712 | None:intergenic | 35.0% | |
| TGGTGAGATCAATCAATAAG+TGG | + | tig0018186:71696-71715 | None:intergenic | 35.0% | |
| ACAAAGGTCTGTAGAATTGA+TGG | + | tig0018186:71716-71735 | None:intergenic | 35.0% | |
| GATATGCAGTTATAGTTGTG+CGG | + | tig0018186:71803-71822 | None:intergenic | 35.0% | |
| AGTAAAGTGATGTTTGAGGA+TGG | + | tig0018186:71838-71857 | None:intergenic | 35.0% | |
| GGAATTGAATGTTGAAACAG+GGG | + | tig0018186:71867-71886 | None:intergenic | 35.0% | |
| GTGGAATTGAATGTTGAAAC+AGG | + | tig0018186:71869-71888 | None:intergenic | 35.0% | |
| ! | TTTTCTGCATTAGTGGAAAC+GGG | - | tig0018186:72003-72022 | Msa1364750:CDS | 35.0% |
| GAAGCAAATATTGTTCAAGC+AGG | - | tig0018186:72087-72106 | Msa1364750:CDS | 35.0% | |
| AAATATTGTTCAAGCAGGTG+AGG | - | tig0018186:72092-72111 | Msa1364750:CDS | 35.0% | |
| AGCACAGCTCTTGTAATATT+TGG | + | tig0018186:72160-72179 | None:intergenic | 35.0% | |
| ! | TGGTAGGATTTGGTTTCAAA+AGG | + | tig0018186:72298-72317 | None:intergenic | 35.0% |
| ATTTGGACCCTCATACAAAA+AGG | - | tig0018186:72450-72469 | Msa1364750:intron | 35.0% | |
| ! | CTAACCTCCTTTTTGTATGA+GGG | + | tig0018186:72460-72479 | None:intergenic | 35.0% |
| ! | TCTAACCTCCTTTTTGTATG+AGG | + | tig0018186:72461-72480 | None:intergenic | 35.0% |
| AAGCAGAAATTTCCGATCTA+TGG | - | tig0018186:72508-72527 | Msa1364750:CDS | 35.0% | |
| TTGCTTCAACAACCATAGAT+CGG | + | tig0018186:72523-72542 | None:intergenic | 35.0% | |
| TCTATGGTTGTTGAAGCAAA+TGG | - | tig0018186:72524-72543 | Msa1364750:CDS | 35.0% | |
| TCGTTTGCGAAATGTATTCT+GGG | - | tig0018186:72712-72731 | Msa1364750:CDS | 35.0% | |
| ! | ATGATTGACTCCAACAAAAG+GGG | + | tig0018186:72831-72850 | None:intergenic | 35.0% |
| ! | GATGATTGACTCCAACAAAA+GGG | + | tig0018186:72832-72851 | None:intergenic | 35.0% |
| ! | TGATGATTGACTCCAACAAA+AGG | + | tig0018186:72833-72852 | None:intergenic | 35.0% |
| TTTGTTGGAGTCAATCATCA+CGG | - | tig0018186:72833-72852 | Msa1364750:intron | 35.0% | |
| !! | TGTTTTGAACAGCCAAGAAA+AGG | + | tig0018186:72909-72928 | None:intergenic | 35.0% |
| TTTCTTGGCTGTTCAAAACA+TGG | - | tig0018186:72909-72928 | Msa1364750:intron | 35.0% | |
| TGGTCAGTAATTATGGCATT+TGG | + | tig0018186:72959-72978 | None:intergenic | 35.0% | |
| AAAAAGGTTCCGGAAAAGTT+GGG | - | tig0018186:73055-73074 | Msa1364750:intron | 35.0% | |
| TTCGAGCATATCTGATTTCA+TGG | - | tig0018186:73135-73154 | Msa1364750:intron | 35.0% | |
| TATCTGATTTCATGGAGAAG+TGG | - | tig0018186:73143-73162 | Msa1364750:intron | 35.0% | |
| ! | ACGAACTGCATGATAATGAA+TGG | - | tig0018186:73185-73204 | Msa1364750:CDS | 35.0% |
| ! | ATTTTGAACTCTGGTTGAAG+AGG | - | tig0018186:71398-71417 | Msa1364750:CDS | 35.0% |
| ! | TTTTGAACTCTGGTTGAAGA+GGG | - | tig0018186:71399-71418 | Msa1364750:CDS | 35.0% |
| TGAGATCAATCAATAAGTGG+CGG | + | tig0018186:71693-71712 | None:intergenic | 35.0% | |
| TGGTGAGATCAATCAATAAG+TGG | + | tig0018186:71696-71715 | None:intergenic | 35.0% | |
| ACAAAGGTCTGTAGAATTGA+TGG | + | tig0018186:71716-71735 | None:intergenic | 35.0% | |
| GATATGCAGTTATAGTTGTG+CGG | + | tig0018186:71803-71822 | None:intergenic | 35.0% | |
| AGTAAAGTGATGTTTGAGGA+TGG | + | tig0018186:71838-71857 | None:intergenic | 35.0% | |
| GGAATTGAATGTTGAAACAG+GGG | + | tig0018186:71867-71886 | None:intergenic | 35.0% | |
| GTGGAATTGAATGTTGAAAC+AGG | + | tig0018186:71869-71888 | None:intergenic | 35.0% | |
| ! | TTTTCTGCATTAGTGGAAAC+GGG | - | tig0018186:72003-72022 | Msa1364750:CDS | 35.0% |
| GAAGCAAATATTGTTCAAGC+AGG | - | tig0018186:72087-72106 | Msa1364750:CDS | 35.0% | |
| AAATATTGTTCAAGCAGGTG+AGG | - | tig0018186:72092-72111 | Msa1364750:CDS | 35.0% | |
| AGCACAGCTCTTGTAATATT+TGG | + | tig0018186:72160-72179 | None:intergenic | 35.0% | |
| ! | TGGTAGGATTTGGTTTCAAA+AGG | + | tig0018186:72298-72317 | None:intergenic | 35.0% |
| ATTTGGACCCTCATACAAAA+AGG | - | tig0018186:72450-72469 | Msa1364750:intron | 35.0% | |
| ! | CTAACCTCCTTTTTGTATGA+GGG | + | tig0018186:72460-72479 | None:intergenic | 35.0% |
| ! | TCTAACCTCCTTTTTGTATG+AGG | + | tig0018186:72461-72480 | None:intergenic | 35.0% |
| AAGCAGAAATTTCCGATCTA+TGG | - | tig0018186:72508-72527 | Msa1364750:CDS | 35.0% | |
| TTGCTTCAACAACCATAGAT+CGG | + | tig0018186:72523-72542 | None:intergenic | 35.0% | |
| TCTATGGTTGTTGAAGCAAA+TGG | - | tig0018186:72524-72543 | Msa1364750:CDS | 35.0% | |
| TCGTTTGCGAAATGTATTCT+GGG | - | tig0018186:72712-72731 | Msa1364750:CDS | 35.0% | |
| ! | ATGATTGACTCCAACAAAAG+GGG | + | tig0018186:72831-72850 | None:intergenic | 35.0% |
| ! | GATGATTGACTCCAACAAAA+GGG | + | tig0018186:72832-72851 | None:intergenic | 35.0% |
| ! | TGATGATTGACTCCAACAAA+AGG | + | tig0018186:72833-72852 | None:intergenic | 35.0% |
| TTTGTTGGAGTCAATCATCA+CGG | - | tig0018186:72833-72852 | Msa1364750:intron | 35.0% | |
| !! | TGTTTTGAACAGCCAAGAAA+AGG | + | tig0018186:72909-72928 | None:intergenic | 35.0% |
| TTTCTTGGCTGTTCAAAACA+TGG | - | tig0018186:72909-72928 | Msa1364750:intron | 35.0% | |
| TGGTCAGTAATTATGGCATT+TGG | + | tig0018186:72959-72978 | None:intergenic | 35.0% | |
| AAAAAGGTTCCGGAAAAGTT+GGG | - | tig0018186:73055-73074 | Msa1364750:intron | 35.0% | |
| TTCGAGCATATCTGATTTCA+TGG | - | tig0018186:73135-73154 | Msa1364750:intron | 35.0% | |
| TATCTGATTTCATGGAGAAG+TGG | - | tig0018186:73143-73162 | Msa1364750:intron | 35.0% | |
| ! | ACGAACTGCATGATAATGAA+TGG | - | tig0018186:73185-73204 | Msa1364750:CDS | 35.0% |
| TCTGTATAATCGTGCTCACA+AGG | + | tig0018186:71482-71501 | None:intergenic | 40.0% | |
| ATCTACTTCTTCTGTCCAAG+AGG | - | tig0018186:72026-72045 | Msa1364750:CDS | 40.0% | |
| TTATGTGATCAACCTCCTCT+TGG | + | tig0018186:72044-72063 | None:intergenic | 40.0% | |
| CTAAATGTCATCCCAATCCT+AGG | + | tig0018186:72120-72139 | None:intergenic | 40.0% | |
| AAGAGCTGTGCTAGATGTAT+GGG | - | tig0018186:72168-72187 | Msa1364750:CDS | 40.0% | |
| ! | TGTGCTAGATGTATGGGTTT+TGG | - | tig0018186:72174-72193 | Msa1364750:CDS | 40.0% |
| TGTGCTCTTATGGTAGGATT+TGG | + | tig0018186:72308-72327 | None:intergenic | 40.0% | |
| ATACACTGTGCTCTTATGGT+AGG | + | tig0018186:72314-72333 | None:intergenic | 40.0% | |
| ! | TACCATAAGAGCACAGTGTA+TGG | - | tig0018186:72313-72332 | Msa1364750:intron | 40.0% |
| GTTGCTCTTGAGCATAATCA+TGG | - | tig0018186:72386-72405 | Msa1364750:intron | 40.0% | |
| GTCGTTTGCGAAATGTATTC+TGG | - | tig0018186:72711-72730 | Msa1364750:CDS | 40.0% | |
| ! | AGGGCTGCTTATGAGTATTT+TGG | - | tig0018186:72749-72768 | Msa1364750:CDS | 40.0% |
| !!! | CACGGTCAATCAGTTTTGTT+AGG | - | tig0018186:72851-72870 | Msa1364750:intron | 40.0% |
| CGTATCCTCATTCGACAATA+GGG | + | tig0018186:72882-72901 | None:intergenic | 40.0% | |
| CCTATTGTCGAATGAGGATA+CGG | - | tig0018186:72880-72899 | Msa1364750:intron | 40.0% | |
| ! | AGGATACGGAAACCTTTTCT+TGG | - | tig0018186:72894-72913 | Msa1364750:intron | 40.0% |
| ACATGGTTAGAATGCATGCA+TGG | - | tig0018186:72926-72945 | Msa1364750:intron | 40.0% | |
| CCTTCTTCATTGCTCTATCT+TGG | + | tig0018186:72979-72998 | None:intergenic | 40.0% | |
| CCAAGATAGAGCAATGAAGA+AGG | - | tig0018186:72976-72995 | Msa1364750:intron | 40.0% | |
| AGCAATGAAGAAGGCAATTG+AGG | - | tig0018186:72985-73004 | Msa1364750:intron | 40.0% | |
| GAAAAAGGTTCCGGAAAAGT+TGG | - | tig0018186:73054-73073 | Msa1364750:intron | 40.0% | |
| ! | GAATGACTACCCAACTTTTC+CGG | + | tig0018186:73067-73086 | None:intergenic | 40.0% |
| TCTGTATAATCGTGCTCACA+AGG | + | tig0018186:71482-71501 | None:intergenic | 40.0% | |
| ATCTACTTCTTCTGTCCAAG+AGG | - | tig0018186:72026-72045 | Msa1364750:CDS | 40.0% | |
| TTATGTGATCAACCTCCTCT+TGG | + | tig0018186:72044-72063 | None:intergenic | 40.0% | |
| CTAAATGTCATCCCAATCCT+AGG | + | tig0018186:72120-72139 | None:intergenic | 40.0% | |
| AAGAGCTGTGCTAGATGTAT+GGG | - | tig0018186:72168-72187 | Msa1364750:CDS | 40.0% | |
| ! | TGTGCTAGATGTATGGGTTT+TGG | - | tig0018186:72174-72193 | Msa1364750:CDS | 40.0% |
| TGTGCTCTTATGGTAGGATT+TGG | + | tig0018186:72308-72327 | None:intergenic | 40.0% | |
| ATACACTGTGCTCTTATGGT+AGG | + | tig0018186:72314-72333 | None:intergenic | 40.0% | |
| ! | TACCATAAGAGCACAGTGTA+TGG | - | tig0018186:72313-72332 | Msa1364750:intron | 40.0% |
| GTTGCTCTTGAGCATAATCA+TGG | - | tig0018186:72386-72405 | Msa1364750:intron | 40.0% | |
| GTCGTTTGCGAAATGTATTC+TGG | - | tig0018186:72711-72730 | Msa1364750:CDS | 40.0% | |
| ! | AGGGCTGCTTATGAGTATTT+TGG | - | tig0018186:72749-72768 | Msa1364750:CDS | 40.0% |
| !!! | CACGGTCAATCAGTTTTGTT+AGG | - | tig0018186:72851-72870 | Msa1364750:intron | 40.0% |
| CGTATCCTCATTCGACAATA+GGG | + | tig0018186:72882-72901 | None:intergenic | 40.0% | |
| CCTATTGTCGAATGAGGATA+CGG | - | tig0018186:72880-72899 | Msa1364750:intron | 40.0% | |
| ! | AGGATACGGAAACCTTTTCT+TGG | - | tig0018186:72894-72913 | Msa1364750:intron | 40.0% |
| ACATGGTTAGAATGCATGCA+TGG | - | tig0018186:72926-72945 | Msa1364750:intron | 40.0% | |
| CCTTCTTCATTGCTCTATCT+TGG | + | tig0018186:72979-72998 | None:intergenic | 40.0% | |
| CCAAGATAGAGCAATGAAGA+AGG | - | tig0018186:72976-72995 | Msa1364750:intron | 40.0% | |
| AGCAATGAAGAAGGCAATTG+AGG | - | tig0018186:72985-73004 | Msa1364750:intron | 40.0% | |
| GAAAAAGGTTCCGGAAAAGT+TGG | - | tig0018186:73054-73073 | Msa1364750:intron | 40.0% | |
| ! | GAATGACTACCCAACTTTTC+CGG | + | tig0018186:73067-73086 | None:intergenic | 40.0% |
| AGTGGCGGTTAAACTGCATT+TGG | + | tig0018186:71678-71697 | None:intergenic | 45.0% | |
| GATGGTAGAGCAGACAACAA+CGG | + | tig0018186:71749-71768 | None:intergenic | 45.0% | |
| TACTTCTTCTGTCCAAGAGG+AGG | - | tig0018186:72029-72048 | Msa1364750:CDS | 45.0% | |
| CAAGAGCTGTGCTAGATGTA+TGG | - | tig0018186:72167-72186 | Msa1364750:CDS | 45.0% | |
| AGCCATACACTGTGCTCTTA+TGG | + | tig0018186:72318-72337 | None:intergenic | 45.0% | |
| TGGACCCTCATACAAAAAGG+AGG | - | tig0018186:72453-72472 | Msa1364750:intron | 45.0% | |
| ! | ATGCCTTTTGCCCCTTTTGT+TGG | - | tig0018186:72818-72837 | Msa1364750:CDS | 45.0% |
| ACTCCAACAAAAGGGGCAAA+AGG | + | tig0018186:72824-72843 | None:intergenic | 45.0% | |
| TTGTGCCCTATTGTCGAATG+AGG | - | tig0018186:72874-72893 | Msa1364750:intron | 45.0% | |
| CCGTATCCTCATTCGACAAT+AGG | + | tig0018186:72883-72902 | None:intergenic | 45.0% | |
| AATGCCACAAACACCATCGA+TGG | + | tig0018186:73030-73049 | None:intergenic | 45.0% | |
| AGTGGCGGTTAAACTGCATT+TGG | + | tig0018186:71678-71697 | None:intergenic | 45.0% | |
| GATGGTAGAGCAGACAACAA+CGG | + | tig0018186:71749-71768 | None:intergenic | 45.0% | |
| TACTTCTTCTGTCCAAGAGG+AGG | - | tig0018186:72029-72048 | Msa1364750:CDS | 45.0% | |
| CAAGAGCTGTGCTAGATGTA+TGG | - | tig0018186:72167-72186 | Msa1364750:CDS | 45.0% | |
| AGCCATACACTGTGCTCTTA+TGG | + | tig0018186:72318-72337 | None:intergenic | 45.0% | |
| TGGACCCTCATACAAAAAGG+AGG | - | tig0018186:72453-72472 | Msa1364750:intron | 45.0% | |
| ! | ATGCCTTTTGCCCCTTTTGT+TGG | - | tig0018186:72818-72837 | Msa1364750:CDS | 45.0% |
| ACTCCAACAAAAGGGGCAAA+AGG | + | tig0018186:72824-72843 | None:intergenic | 45.0% | |
| TTGTGCCCTATTGTCGAATG+AGG | - | tig0018186:72874-72893 | Msa1364750:intron | 45.0% | |
| CCGTATCCTCATTCGACAAT+AGG | + | tig0018186:72883-72902 | None:intergenic | 45.0% | |
| AATGCCACAAACACCATCGA+TGG | + | tig0018186:73030-73049 | None:intergenic | 45.0% | |
| GCATTTGGCGCTGTAAACGT+GGG | + | tig0018186:71663-71682 | None:intergenic | 50.0% | |
| TGCATTTGGCGCTGTAAACG+TGG | + | tig0018186:71664-71683 | None:intergenic | 50.0% | |
| TTCAAGCAGGTGAGGAACCT+AGG | - | tig0018186:72100-72119 | Msa1364750:CDS | 50.0% | |
| CAGGTGAGGAACCTAGGATT+GGG | - | tig0018186:72106-72125 | Msa1364750:CDS | 50.0% | |
| AAAGCAAGACGGCTTCCACT+TGG | - | tig0018186:72596-72615 | Msa1364750:intron | 50.0% | |
| AAGCAAGACGGCTTCCACTT+GGG | - | tig0018186:72597-72616 | Msa1364750:intron | 50.0% | |
| TCAGCATCTCCTATCCCAAG+TGG | + | tig0018186:72614-72633 | None:intergenic | 50.0% | |
| TCTGGGTAGATGCGAGATGT+AGG | - | tig0018186:72729-72748 | Msa1364750:CDS | 50.0% | |
| CTGGGTAGATGCGAGATGTA+GGG | - | tig0018186:72730-72749 | Msa1364750:CDS | 50.0% | |
| TTCCAAAAGCTCGCCATCGA+TGG | - | tig0018186:73014-73033 | Msa1364750:intron | 50.0% | |
| GCATTTGGCGCTGTAAACGT+GGG | + | tig0018186:71663-71682 | None:intergenic | 50.0% | |
| TGCATTTGGCGCTGTAAACG+TGG | + | tig0018186:71664-71683 | None:intergenic | 50.0% | |
| TTCAAGCAGGTGAGGAACCT+AGG | - | tig0018186:72100-72119 | Msa1364750:CDS | 50.0% | |
| CAGGTGAGGAACCTAGGATT+GGG | - | tig0018186:72106-72125 | Msa1364750:CDS | 50.0% | |
| AAAGCAAGACGGCTTCCACT+TGG | - | tig0018186:72596-72615 | Msa1364750:intron | 50.0% | |
| AAGCAAGACGGCTTCCACTT+GGG | - | tig0018186:72597-72616 | Msa1364750:intron | 50.0% | |
| TCAGCATCTCCTATCCCAAG+TGG | + | tig0018186:72614-72633 | None:intergenic | 50.0% | |
| TCTGGGTAGATGCGAGATGT+AGG | - | tig0018186:72729-72748 | Msa1364750:CDS | 50.0% | |
| CTGGGTAGATGCGAGATGTA+GGG | - | tig0018186:72730-72749 | Msa1364750:CDS | 50.0% | |
| TTCCAAAAGCTCGCCATCGA+TGG | - | tig0018186:73014-73033 | Msa1364750:intron | 50.0% | |
| CAACGGCGACGAAAGGACAA+AGG | + | tig0018186:71732-71751 | None:intergenic | 55.0% | |
| CAGACAACAACGGCGACGAA+AGG | + | tig0018186:71739-71758 | None:intergenic | 55.0% | |
| GGTGAATACAACAGCGGCGA+TGG | + | tig0018186:71767-71786 | None:intergenic | 55.0% | |
| CGTGGCGGTGAATACAACAG+CGG | + | tig0018186:71773-71792 | None:intergenic | 55.0% | |
| CGCTGTTGTATTCACCGCCA+CGG | - | tig0018186:71771-71790 | Msa1364750:CDS | 55.0% | |
| GCAGGTGAGGAACCTAGGAT+TGG | - | tig0018186:72105-72124 | Msa1364750:CDS | 55.0% | |
| AGACGGCTTCCACTTGGGAT+AGG | - | tig0018186:72602-72621 | Msa1364750:intron | 55.0% | |
| ! | CACCATCGATGGCGAGCTTT+TGG | + | tig0018186:73019-73038 | None:intergenic | 55.0% |
| CTCGCCATCGATGGTGTTTG+TGG | - | tig0018186:73023-73042 | Msa1364750:intron | 55.0% | |
| CAACGGCGACGAAAGGACAA+AGG | + | tig0018186:71732-71751 | None:intergenic | 55.0% | |
| CAGACAACAACGGCGACGAA+AGG | + | tig0018186:71739-71758 | None:intergenic | 55.0% | |
| GGTGAATACAACAGCGGCGA+TGG | + | tig0018186:71767-71786 | None:intergenic | 55.0% | |
| CGTGGCGGTGAATACAACAG+CGG | + | tig0018186:71773-71792 | None:intergenic | 55.0% | |
| CGCTGTTGTATTCACCGCCA+CGG | - | tig0018186:71771-71790 | Msa1364750:CDS | 55.0% | |
| GCAGGTGAGGAACCTAGGAT+TGG | - | tig0018186:72105-72124 | Msa1364750:CDS | 55.0% | |
| AGACGGCTTCCACTTGGGAT+AGG | - | tig0018186:72602-72621 | Msa1364750:intron | 55.0% | |
| ! | CACCATCGATGGCGAGCTTT+TGG | + | tig0018186:73019-73038 | None:intergenic | 55.0% |
| CTCGCCATCGATGGTGTTTG+TGG | - | tig0018186:73023-73042 | Msa1364750:intron | 55.0% | |
| TAGTTGTGCGGCGAGAACCG+TGG | + | tig0018186:71791-71810 | None:intergenic | 60.0% | |
| TAGTTGTGCGGCGAGAACCG+TGG | + | tig0018186:71791-71810 | None:intergenic | 60.0% | |
| TTGTGCGGCGAGAACCGTGG+CGG | + | tig0018186:71788-71807 | None:intergenic | 65.0% | |
| TTGTGCGGCGAGAACCGTGG+CGG | + | tig0018186:71788-71807 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018186 | gene | 71358 | 73213 | 71358 | ID=Msa1364750;Name=Msa1364750 |
| tig0018186 | mRNA | 71358 | 73213 | 71358 | ID=Msa1364750-mRNA-1;Parent=Msa1364750;Name=Msa1364750-mRNA-1;_AED=0.46;_eAED=0.46;_QI=0|0|0|0.5|1|1|4|0|436 |
| tig0018186 | exon | 73151 | 73213 | 73151 | ID=Msa1364750-mRNA-1:exon:14179;Parent=Msa1364750-mRNA-1 |
| tig0018186 | exon | 72677 | 72843 | 72677 | ID=Msa1364750-mRNA-1:exon:14178;Parent=Msa1364750-mRNA-1 |
| tig0018186 | exon | 72463 | 72584 | 72463 | ID=Msa1364750-mRNA-1:exon:14177;Parent=Msa1364750-mRNA-1 |
| tig0018186 | exon | 71358 | 72316 | 71358 | ID=Msa1364750-mRNA-1:exon:14176;Parent=Msa1364750-mRNA-1 |
| tig0018186 | CDS | 73151 | 73213 | 73151 | ID=Msa1364750-mRNA-1:cds;Parent=Msa1364750-mRNA-1 |
| tig0018186 | CDS | 72677 | 72843 | 72677 | ID=Msa1364750-mRNA-1:cds;Parent=Msa1364750-mRNA-1 |
| tig0018186 | CDS | 72463 | 72584 | 72463 | ID=Msa1364750-mRNA-1:cds;Parent=Msa1364750-mRNA-1 |
| tig0018186 | CDS | 71358 | 72316 | 71358 | ID=Msa1364750-mRNA-1:cds;Parent=Msa1364750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
