AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1366740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1366740 MtrunA17_Chr4g0057031 98.897 272 3 0 1 272 1 272 0.0 556
Msa1366740 MtrunA17_Chr5g0434571 58.108 222 77 3 1 207 37 257 3.31e-85 258
Msa1366740 MtrunA17_Chr3g0110351 63.084 214 70 3 1 206 1 213 2.67e-84 254
Msa1366740 MtrunA17_Chr7g0228891 72.263 137 38 0 1 137 1 137 6.29e-72 222
Msa1366740 MtrunA17_Chr6g0453471 64.667 150 52 1 1 149 1 150 5.33e-67 212
Msa1366740 MtrunA17_Chr7g0217741 68.702 131 41 0 1 131 1 131 5.47e-67 210
Msa1366740 MtrunA17_Chr4g0042671 66.216 148 48 1 1 148 1 146 3.32e-66 211
Msa1366740 MtrunA17_Chr3g0115821 69.531 128 39 0 1 128 1 128 7.38e-66 209
Msa1366740 MtrunA17_Chr8g0349261 73.282 131 33 2 1 129 1 131 1.72e-65 206
Msa1366740 MtrunA17_Chr4g0039971 69.531 128 39 0 1 128 2 129 4.37e-65 207
Msa1366740 MtrunA17_Chr4g0037141 62.329 146 55 0 1 146 1 146 1.90e-64 203
Msa1366740 MtrunA17_Chr5g0410961 69.531 128 39 0 1 128 1 128 6.45e-64 204
Msa1366740 MtrunA17_Chr2g0281071 68.992 129 39 1 1 128 1 129 7.66e-64 203
Msa1366740 MtrunA17_Chr4g0048511 68.217 129 40 1 1 128 1 129 1.89e-63 203
Msa1366740 MtrunA17_Chr2g0323411 68.750 128 40 0 1 128 1 128 6.84e-63 200
Msa1366740 MtrunA17_Chr3g0131121 60.927 151 56 1 1 151 1 148 4.75e-62 197
Msa1366740 MtrunA17_Chr1g0193371 58.333 156 65 0 1 156 1 156 1.07e-61 199
Msa1366740 MtrunA17_Chr5g0435101 55.488 164 70 2 3 166 2 162 1.99e-61 193
Msa1366740 MtrunA17_Chr8g0385321 65.891 129 44 0 1 129 1 129 6.59e-61 195
Msa1366740 MtrunA17_Chr5g0395281 64.062 128 46 0 1 128 1 128 3.18e-59 190
Msa1366740 MtrunA17_Chr7g0270891 48.187 193 93 2 1 191 1 188 4.03e-59 192
Msa1366740 MtrunA17_Chr3g0103281 58.741 143 59 0 1 143 1 143 4.74e-59 191
Msa1366740 MtrunA17_Chr6g0452271 59.060 149 60 1 1 149 1 148 6.89e-59 190
Msa1366740 MtrunA17_Chr3g0117091 63.566 129 47 0 1 129 1 129 1.16e-58 190
Msa1366740 MtrunA17_Chr4g0058631 48.958 192 76 1 1 192 1 170 1.32e-58 190
Msa1366740 MtrunA17_Chr1g0193801 51.955 179 79 2 1 172 1 179 3.32e-58 190
Msa1366740 MtrunA17_Chr1g0211161 64.567 127 45 0 3 129 4 130 6.44e-58 184
Msa1366740 MtrunA17_Chr3g0121241 64.800 125 44 0 5 129 35 159 2.20e-56 183
Msa1366740 MtrunA17_Chr2g0309911 65.116 129 44 1 1 129 1 128 2.79e-56 183
Msa1366740 MtrunA17_Chr7g0261281 68.966 116 36 0 1 116 1 116 7.32e-56 181
Msa1366740 MtrunA17_Chr7g0271241 65.116 129 45 0 1 129 1 129 2.59e-55 182
Msa1366740 MtrunA17_Chr4g0044421 60.690 145 50 2 3 140 2 146 1.79e-54 174
Msa1366740 MtrunA17_Chr7g0274581 47.283 184 89 2 1 183 1 177 3.78e-54 174
Msa1366740 MtrunA17_Chr1g0187761 66.379 116 39 0 1 116 1 116 5.77e-54 175
Msa1366740 MtrunA17_Chr4g0068061 50.898 167 74 2 1 159 1 167 1.36e-53 177
Msa1366740 MtrunA17_Chr1g0167661 42.222 225 104 3 1 218 1 206 2.95e-53 173
Msa1366740 MtrunA17_Chr8g0342521 62.602 123 46 0 1 123 1 123 6.58e-53 175
Msa1366740 MtrunA17_Chr7g0217221 67.797 118 38 0 1 118 1 118 1.49e-52 172
Msa1366740 MtrunA17_Chr1g0167691 64.103 117 42 0 1 117 1 117 2.26e-52 171
Msa1366740 MtrunA17_Chr7g0275911 63.793 116 42 0 1 116 1 116 2.30e-52 171
Msa1366740 MtrunA17_Chr1g0203411 63.793 116 42 0 1 116 1 116 5.21e-52 171
Msa1366740 MtrunA17_Chr8g0346561 63.793 116 42 0 1 116 1 116 5.97e-52 171
Msa1366740 MtrunA17_Chr8g0342541 61.789 123 47 0 1 123 1 123 6.35e-52 172
Msa1366740 MtrunA17_Chr2g0330041 60.800 125 49 0 1 125 1 125 9.53e-52 174
Msa1366740 MtrunA17_Chr5g0417821 63.025 119 44 0 10 128 5 123 2.22e-51 169
Msa1366740 MtrunA17_Chr4g0060721 62.712 118 44 0 1 118 2 119 2.73e-51 171
Msa1366740 MtrunA17_Chr8g0387421 63.559 118 43 0 1 118 1 118 3.86e-51 170
Msa1366740 MtrunA17_Chr8g0342481 64.407 118 41 1 1 117 1 118 4.85e-51 172
Msa1366740 MtrunA17_Chr1g0194951 60.156 128 51 0 1 128 1 128 4.90e-51 171
Msa1366740 MtrunA17_Chr4g0022911 49.689 161 72 3 1 160 1 153 8.79e-51 168
Msa1366740 MtrunA17_Chr4g0022901 62.712 118 43 1 1 117 1 118 1.22e-50 167
Msa1366740 MtrunA17_Chr4g0070611 65.517 116 40 0 1 116 1 116 1.45e-50 168
Msa1366740 MtrunA17_Chr2g0311221 69.091 110 34 0 2 111 4 113 1.55e-50 169
Msa1366740 MtrunA17_Chr7g0254411 53.896 154 65 1 1 154 1 148 1.76e-50 169
Msa1366740 MtrunA17_Chr3g0092401 41.810 232 92 4 1 231 2 191 1.93e-50 168
Msa1366740 MtrunA17_Chr2g0323351 62.712 118 44 0 1 118 1 118 2.11e-50 166
Msa1366740 MtrunA17_Chr4g0070641 65.517 116 40 0 1 116 1 116 5.90e-50 162
Msa1366740 MtrunA17_Chr1g0151941 40.553 217 95 5 1 183 1 217 1.86e-49 164
Msa1366740 MtrunA17_Chr4g0022931 61.538 117 44 1 1 116 1 117 2.02e-49 164
Msa1366740 MtrunA17_Chr5g0397231 62.727 110 41 0 1 110 1 110 1.00e-47 162
Msa1366740 MtrunA17_Chr2g0328771 56.296 135 49 1 12 146 20 144 3.54e-47 159
Msa1366740 MtrunA17_Chr4g0032401 56.061 132 50 1 12 143 17 140 5.59e-47 159
Msa1366740 MtrunA17_Chr7g0269831 62.185 119 45 0 1 119 1 119 6.37e-47 160
Msa1366740 MtrunA17_Chr5g0400821 59.322 118 47 1 1 117 1 118 1.13e-46 158
Msa1366740 MtrunA17_Chr4g0022891 46.448 183 88 4 1 174 1 182 1.25e-46 156
Msa1366740 MtrunA17_Chr3g0135311 52.667 150 69 2 1 148 1 150 1.65e-46 159
Msa1366740 MtrunA17_Chr6g0453211 63.063 111 41 0 1 111 1 111 1.67e-46 158
Msa1366740 MtrunA17_Chr4g0028311 53.906 128 58 1 1 127 1 128 1.92e-46 158
Msa1366740 MtrunA17_Chr1g0152011 59.322 118 47 1 1 117 1 118 2.71e-46 158
Msa1366740 MtrunA17_Chr4g0022881 58.772 114 47 0 1 114 1 114 4.80e-46 154
Msa1366740 MtrunA17_Chr1g0186061 66.019 103 35 0 13 115 21 123 5.60e-46 155
Msa1366740 MtrunA17_Chr7g0264641 56.667 120 51 1 1 119 1 120 2.87e-45 153
Msa1366740 MtrunA17_Chr3g0088461 61.468 109 42 0 8 116 18 126 3.77e-45 155
Msa1366740 MtrunA17_Chr1g0168661 65.049 103 36 0 13 115 22 124 8.96e-45 152
Msa1366740 MtrunA17_Chr6g0470971 51.049 143 67 2 1 141 1 142 1.48e-44 152
Msa1366740 MtrunA17_Chr2g0327351 59.459 111 44 1 1 110 1 111 1.09e-43 150
Msa1366740 MtrunA17_Chr7g0247131 75.862 87 21 0 43 129 9 95 1.27e-43 149
Msa1366740 MtrunA17_Chr4g0072751 60.360 111 43 1 1 110 1 111 1.85e-43 150
Msa1366740 MtrunA17_Chr7g0228231 61.905 105 40 0 12 116 14 118 4.30e-43 145
Msa1366740 MtrunA17_Chr4g0054391 59.091 110 44 1 1 109 1 110 1.02e-42 147
Msa1366740 MtrunA17_Chr6g0450101 56.780 118 49 1 1 116 1 118 1.79e-42 144
Msa1366740 MtrunA17_Chr1g0194291 58.929 112 46 0 11 122 20 131 1.82e-42 146
Msa1366740 MtrunA17_Chr2g0327821 53.175 126 56 1 12 134 6 131 2.35e-42 145
Msa1366740 MtrunA17_Chr1g0203441 56.303 119 51 1 1 118 1 119 3.80e-42 145
Msa1366740 MtrunA17_Chr8g0354661 60.577 104 41 0 12 115 37 140 9.70e-42 150
Msa1366740 MtrunA17_Chr1g0209661 55.856 111 49 0 12 122 27 137 1.31e-41 145
Msa1366740 MtrunA17_Chr1g0194301 53.913 115 53 0 8 122 29 143 1.61e-41 144
Msa1366740 MtrunA17_Chr6g0487491 53.175 126 50 2 1 117 1 126 2.50e-41 143
Msa1366740 MtrunA17_Chr3g0099131 57.692 104 44 0 12 115 41 144 4.13e-40 145
Msa1366740 MtrunA17_Chr1g0180391 57.143 105 45 0 12 116 19 123 4.88e-40 139
Msa1366740 MtrunA17_Chr4g0030881 57.273 110 40 1 13 115 8 117 5.17e-40 139
Msa1366740 MtrunA17_Chr4g0055981 51.111 135 66 0 12 146 55 189 2.80e-39 137
Msa1366740 MtrunA17_Chr3g0080861 56.731 104 45 0 12 115 37 140 3.71e-39 142
Msa1366740 MtrunA17_Chr8g0343831 57.944 107 45 0 12 118 8 114 1.12e-38 135
Msa1366740 MtrunA17_Chr1g0154031 56.731 104 45 0 12 115 76 179 4.20e-38 138
Msa1366740 MtrunA17_Chr2g0293911 53.913 115 53 0 8 122 20 134 2.76e-37 134
Msa1366740 MtrunA17_Chr5g0434931 56.075 107 47 0 11 117 34 140 9.19e-37 131
Msa1366740 MtrunA17_Chr4g0068921 56.075 107 47 0 8 114 20 126 1.12e-36 129
Msa1366740 MtrunA17_Chr5g0434911 53.153 111 52 0 7 117 16 126 2.30e-36 130
Msa1366740 MtrunA17_Chr4g0042611 64.773 88 31 0 1 88 1 88 2.60e-36 124
Msa1366740 MtrunA17_Chr7g0240821 58.416 101 42 0 16 116 5 105 7.92e-36 127
Msa1366740 MtrunA17_Chr2g0322521 56.075 107 47 0 9 115 26 132 9.66e-36 131
Msa1366740 MtrunA17_Chr7g0228991 38.756 209 110 4 11 210 28 227 1.53e-35 128
Msa1366740 MtrunA17_Chr7g0220341 53.636 110 49 1 10 117 23 132 2.62e-35 127
Msa1366740 MtrunA17_Chr8g0342511 62.069 87 33 0 1 87 1 87 3.26e-35 122
Msa1366740 MtrunA17_Chr2g0294811 63.636 88 32 0 1 88 1 88 3.33e-35 122
Msa1366740 MtrunA17_Chr8g0342461 61.111 90 34 1 1 89 1 90 3.62e-35 123
Msa1366740 MtrunA17_Chr8g0342531 58.511 94 39 0 1 94 1 94 7.97e-35 123
Msa1366740 MtrunA17_Chr8g0342471 61.111 90 34 1 1 89 1 90 9.30e-35 122
Msa1366740 MtrunA17_Chr8g0360111 55.882 102 45 0 11 112 24 125 1.04e-33 123
Msa1366740 MtrunA17_Chr5g0434831 53.271 107 50 0 11 117 6 112 3.65e-33 119
Msa1366740 MtrunA17_Chr5g0440781 45.985 137 70 3 12 145 12 147 6.91e-33 119
Msa1366740 MtrunA17_Chr5g0440761 38.462 182 108 3 12 190 12 192 1.62e-32 120
Msa1366740 MtrunA17_Chr5g0434841 52.336 107 51 0 11 117 19 125 2.27e-32 121
Msa1366740 MtrunA17_Chr2g0323321 58.696 92 37 1 1 92 1 91 3.65e-32 114
Msa1366740 MtrunA17_Chr1g0192411 42.138 159 85 4 8 163 8 162 3.95e-32 122
Msa1366740 MtrunA17_Chr5g0441141 45.985 137 70 3 12 145 12 147 4.41e-32 119
Msa1366740 MtrunA17_Chr5g0395221 59.524 84 34 0 5 88 5 88 4.38e-31 111
Msa1366740 MtrunA17_Chr3g0093811 56.180 89 39 0 43 131 13 101 5.69e-31 116
Msa1366740 MtrunA17_Chr3g0099141 50.575 87 43 0 8 94 36 122 5.04e-29 107
Msa1366740 MtrunA17_Chr8g0334881 49.074 108 54 1 8 114 6 113 1.04e-28 111
Msa1366740 MtrunA17_Chr5g0429661 51.546 97 44 2 14 109 122 216 2.47e-28 111
Msa1366740 MtrunA17_Chr5g0441131 46.491 114 59 2 12 124 9 121 8.31e-28 105
Msa1366740 MtrunA17_Chr4g0013361 41.985 131 72 2 12 141 10 137 3.48e-27 107
Msa1366740 MtrunA17_Chr5g0401731 43.902 123 66 2 14 135 15 135 1.55e-26 105
Msa1366740 MtrunA17_Chr6g0454921 35.429 175 107 3 14 187 15 184 6.33e-26 101
Msa1366740 MtrunA17_Chr3g0117511 43.243 111 60 2 9 118 178 286 1.10e-25 105
Msa1366740 MtrunA17_Chr4g0058991 45.045 111 58 2 9 118 204 312 1.25e-25 105
Msa1366740 MtrunA17_Chr3g0133601 44.444 108 59 1 8 115 31 137 1.30e-25 100
Msa1366740 MtrunA17_Chr7g0238631 50.000 104 49 2 14 116 113 214 1.61e-25 105
Msa1366740 MtrunA17_Chr4g0008551 44.348 115 57 3 14 127 38 146 1.88e-25 103
Msa1366740 MtrunA17_Chr4g0053431 37.748 151 81 4 14 159 5 147 5.88e-25 100
Msa1366740 MtrunA17_Chr7g0229101 32.850 207 128 3 43 244 3 203 3.47e-24 96.7
Msa1366740 MtrunA17_Chr3g0139671 45.192 104 54 2 14 116 85 186 2.83e-23 99.4
Msa1366740 MtrunA17_Chr7g0229131 53.333 75 35 0 43 117 3 77 2.90e-23 93.2
Msa1366740 MtrunA17_Chr7g0228531 44.037 109 59 2 10 118 216 322 6.51e-23 97.1
Msa1366740 MtrunA17_Chr6g0480581 41.353 133 68 5 14 141 4 131 7.57e-23 94.0
Msa1366740 MtrunA17_Chr6g0453751 47.826 92 39 2 11 93 19 110 7.91e-23 90.9
Msa1366740 MtrunA17_Chr5g0437321 45.000 100 52 2 14 112 19 116 2.78e-22 93.6
Msa1366740 MtrunA17_Chr1g0157731 45.192 104 54 2 14 116 91 192 4.13e-22 95.9
Msa1366740 MtrunA17_Chr5g0434901 56.338 71 31 0 43 113 4 74 8.89e-22 87.8
Msa1366740 MtrunA17_Chr5g0417621 43.269 104 56 2 14 116 134 235 9.44e-21 91.3
Msa1366740 MtrunA17_Chr5g0425591 48.193 83 42 1 12 93 9 91 1.09e-20 84.3
Msa1366740 MtrunA17_Chr6g0460661 41.837 98 54 2 14 110 16 111 9.50e-20 84.0
Msa1366740 MtrunA17_Chr4g0042501 41.346 104 58 2 14 116 105 206 9.66e-20 88.2
Msa1366740 MtrunA17_Chr5g0397841 46.392 97 49 2 14 109 110 204 2.26e-19 87.4
Msa1366740 MtrunA17_Chr7g0233061 42.000 100 49 3 14 110 180 273 3.80e-19 85.9
Msa1366740 MtrunA17_Chr1g0177901 44.186 86 47 1 25 110 5 89 7.13e-19 82.8
Msa1366740 MtrunA17_Chr7g0228481 41.584 101 57 2 10 110 216 314 7.42e-19 85.5
Msa1366740 MtrunA17_Chr7g0238651 40.517 116 61 2 17 124 10 125 2.24e-18 83.6
Msa1366740 MtrunA17_Chr7g0228401 34.711 121 48 2 17 110 258 374 2.25e-18 84.3
Msa1366740 MtrunA17_Chr3g0125801 43.689 103 55 2 14 115 16 116 1.18e-17 80.9
Msa1366740 MtrunA17_Chr5g0395231 62.745 51 19 0 78 128 5 55 1.60e-17 79.7
Msa1366740 MtrunA17_Chr6g0460671 34.848 132 83 2 14 144 99 228 3.22e-17 80.5
Msa1366740 MtrunA17_Chr7g0254261 30.508 177 115 3 14 184 89 263 5.04e-17 79.7
Msa1366740 MtrunA17_Chr4g0042621 61.667 60 21 1 89 148 15 72 1.12e-15 75.9
Msa1366740 MtrunA17_Chr3g0145551 62.000 50 19 0 92 141 2 51 1.24e-15 70.5
Msa1366740 MtrunA17_Chr7g0247141 59.574 47 18 1 1 46 1 47 3.89e-14 65.9
Msa1366740 MtrunA17_Chr5g0434871 56.818 44 19 0 74 117 2 45 4.99e-13 63.2
Msa1366740 MtrunA17_Chr5g0416341 37.374 99 61 1 17 115 29 126 1.83e-12 67.0
Msa1366740 MtrunA17_Chr1g0193901 42.857 84 46 2 12 93 11 94 4.58e-12 61.6
Msa1366740 MtrunA17_Chr1g0193891 42.857 84 46 2 12 93 11 94 4.58e-12 61.6
Msa1366740 MtrunA17_Chr1g0193871 42.857 84 46 2 12 93 11 94 4.58e-12 61.6
Msa1366740 MtrunA17_Chr1g0193881 42.857 84 46 2 12 93 11 94 4.58e-12 61.6
Msa1366740 MtrunA17_Chr8g0362231 33.333 126 82 2 17 142 25 148 8.51e-12 64.7
Msa1366740 MtrunA17_Chr3g0104491 40.299 67 36 1 53 115 1 67 1.58e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1366740 AT4G22680.1 62.172 267 84 6 1 251 1 266 2.39e-103 302
Msa1366740 AT4G12350.1 57.447 282 102 6 1 264 1 282 2.57e-103 302
Msa1366740 AT1G66230.1 60.190 211 64 4 1 208 1 194 2.87e-83 251
Msa1366740 AT5G16600.1 83.704 135 22 0 1 135 1 135 8.71e-82 249
Msa1366740 AT5G62320.1 64.815 162 47 2 2 156 3 161 9.59e-72 221
Msa1366740 AT5G14340.1 61.392 158 61 0 1 158 13 170 1.17e-67 211
Msa1366740 AT3G61250.1 63.758 149 54 0 1 149 1 149 4.15e-67 211
Msa1366740 AT4G28110.1 70.312 128 38 0 1 128 1 128 4.78e-67 210
Msa1366740 AT5G15310.1 69.466 131 40 0 1 131 1 131 7.84e-67 211
Msa1366740 AT3G02940.2 71.875 128 36 0 1 128 1 128 8.38e-67 210
Msa1366740 AT5G15310.2 69.466 131 40 0 1 131 1 131 8.52e-67 210
Msa1366740 AT3G01140.2 65.278 144 50 0 1 144 1 144 1.37e-66 211
Msa1366740 AT5G15310.4 70.000 130 39 0 1 130 1 130 1.41e-66 207
Msa1366740 AT5G16770.4 71.094 128 37 0 1 128 1 128 2.37e-66 209
Msa1366740 AT5G16770.3 71.094 128 37 0 1 128 1 128 2.37e-66 209
Msa1366740 AT3G02940.1 71.875 128 36 0 1 128 1 128 2.49e-66 209
Msa1366740 AT3G02940.3 71.875 128 36 0 1 128 1 128 2.49e-66 209
Msa1366740 AT5G16770.1 71.094 128 37 0 1 128 1 128 6.20e-66 209
Msa1366740 AT5G16770.2 71.094 128 37 0 1 128 1 128 6.20e-66 209
Msa1366740 AT1G22640.1 52.632 190 86 1 1 186 1 190 2.15e-65 205
Msa1366740 AT4G34990.1 63.699 146 53 0 1 146 1 146 2.47e-65 205
Msa1366740 AT4G21440.1 67.969 128 41 0 1 128 1 128 6.26e-65 207
Msa1366740 AT4G38620.1 59.211 152 62 0 1 152 1 152 2.70e-64 203
Msa1366740 AT1G34670.1 69.531 128 39 0 1 128 1 128 2.71e-64 206
Msa1366740 AT5G10280.1 66.406 128 43 0 1 128 1 128 1.46e-63 202
Msa1366740 AT4G05100.1 68.217 129 40 1 1 128 1 129 1.95e-63 202
Msa1366740 AT3G01140.1 65.000 140 49 0 5 144 48 187 2.58e-63 204
Msa1366740 AT5G65230.1 67.969 128 41 0 1 128 1 128 6.90e-63 200
Msa1366740 AT4G17785.2 68.217 129 40 1 1 128 1 129 8.94e-63 201
Msa1366740 AT4G17785.1 68.217 129 40 1 1 128 1 129 1.26e-62 201
Msa1366740 AT4G09460.1 49.268 205 99 3 1 203 1 202 2.19e-62 196
Msa1366740 AT1G57560.2 64.029 139 50 0 1 139 1 139 4.82e-62 197
Msa1366740 AT1G57560.1 61.333 150 53 1 1 145 1 150 1.30e-61 197
Msa1366740 AT2G16720.1 54.762 168 74 1 1 168 1 166 1.59e-61 195
Msa1366740 AT5G26660.1 53.763 186 79 3 1 181 1 184 4.34e-61 197
Msa1366740 AT3G13540.1 48.485 198 96 3 5 198 16 211 5.70e-61 193
Msa1366740 AT1G09540.1 56.024 166 72 1 1 166 1 165 6.64e-61 197
Msa1366740 AT5G07690.1 60.993 141 55 0 1 141 1 141 1.41e-60 195
Msa1366740 AT5G61420.2 59.603 151 56 2 1 148 1 149 3.12e-60 195
Msa1366740 AT4G01680.3 57.764 161 63 2 1 161 1 156 1.40e-59 189
Msa1366740 AT5G54230.1 59.868 152 61 0 1 152 1 152 2.22e-59 191
Msa1366740 AT5G07700.1 53.448 174 70 2 1 174 1 163 2.67e-59 192
Msa1366740 AT5G07700.2 53.448 174 70 2 1 174 1 163 2.67e-59 192
Msa1366740 AT4G01680.1 57.764 161 63 2 1 161 1 156 5.15e-59 191
Msa1366740 AT5G56110.1 58.741 143 59 0 1 143 1 143 1.35e-58 189
Msa1366740 AT1G35515.1 49.479 192 83 2 1 189 1 181 1.99e-58 186
Msa1366740 AT1G18570.1 56.962 158 63 3 1 156 1 155 1.92e-57 187
Msa1366740 AT1G74080.1 57.143 147 63 0 1 147 1 147 2.89e-57 186
Msa1366740 AT3G23250.1 47.059 204 99 3 1 204 1 195 1.25e-56 183
Msa1366740 AT2G31180.1 68.644 118 37 0 1 118 1 118 2.00e-56 182
Msa1366740 AT1G06180.1 68.966 116 36 0 1 116 1 116 6.14e-56 180
Msa1366740 AT4G01680.2 53.757 173 63 3 1 161 1 168 1.09e-55 183
Msa1366740 AT3G47600.1 57.419 155 56 1 1 145 1 155 1.66e-55 182
Msa1366740 AT5G60890.1 57.037 135 58 0 1 135 1 135 7.13e-55 179
Msa1366740 AT1G16490.1 52.727 165 70 1 2 158 4 168 1.03e-53 176
Msa1366740 AT3G12720.1 62.698 126 46 1 1 126 12 136 1.03e-53 176
Msa1366740 AT2G47460.1 56.552 145 63 0 1 145 1 145 1.23e-53 178
Msa1366740 AT3G28470.1 56.129 155 60 1 1 147 1 155 2.46e-53 176
Msa1366740 AT5G62470.2 61.151 139 52 1 1 139 1 137 5.57e-53 176
Msa1366740 AT1G79180.1 66.667 117 39 0 2 118 4 120 8.61e-53 174
Msa1366740 AT1G56160.1 67.826 115 37 0 2 116 4 118 2.32e-52 172
Msa1366740 AT5G49330.1 63.025 119 44 0 1 119 1 119 2.59e-52 174
Msa1366740 AT3G62610.1 64.655 116 41 0 1 116 1 116 2.89e-52 174
Msa1366740 AT1G18710.1 55.714 140 62 0 1 140 1 140 3.94e-52 171
Msa1366740 AT3G12820.1 67.241 116 38 0 3 118 5 120 4.86e-52 170
Msa1366740 AT3G28910.1 62.595 131 47 1 1 131 1 129 6.01e-52 172
Msa1366740 AT1G74650.1 63.866 119 43 0 1 119 1 119 1.73e-51 171
Msa1366740 AT1G74430.1 56.934 137 59 0 1 137 1 137 3.06e-51 169
Msa1366740 AT1G08810.1 63.115 122 45 0 1 122 1 122 4.28e-51 169
Msa1366740 AT1G63910.1 55.319 141 63 0 1 141 1 141 1.53e-50 170
Msa1366740 AT5G62470.1 60.432 139 52 2 1 139 1 136 2.30e-50 169
Msa1366740 AT3G13890.2 63.248 117 43 0 1 117 1 117 2.48e-50 169
Msa1366740 AT5G12870.1 67.593 108 35 0 12 119 18 125 5.60e-48 161
Msa1366740 AT3G13890.1 58.730 126 43 1 1 117 1 126 3.27e-47 161
Msa1366740 AT3G49690.1 60.169 118 46 1 1 117 1 118 1.74e-46 158
Msa1366740 AT1G79180.2 52.000 150 39 1 2 118 4 153 6.14e-46 157
Msa1366740 AT4G37780.1 55.303 132 55 3 1 130 1 130 6.15e-46 156
Msa1366740 AT5G65790.1 59.322 118 47 1 1 117 1 118 6.36e-46 158
Msa1366740 AT5G57620.1 52.857 140 59 2 1 139 1 134 7.25e-46 157
Msa1366740 AT2G36890.1 57.031 128 54 1 1 127 1 128 1.17e-45 155
Msa1366740 AT2G36890.2 57.480 127 53 1 1 126 42 168 2.42e-45 155
Msa1366740 AT3G01530.1 52.555 137 62 1 12 148 25 158 4.14e-45 151
Msa1366740 AT5G23000.1 58.475 118 48 1 1 117 1 118 6.17e-45 154
Msa1366740 AT3G08500.1 63.303 109 40 0 8 116 26 134 1.11e-44 154
Msa1366740 AT4G13480.1 66.019 103 35 0 13 115 7 109 1.31e-44 152
Msa1366740 AT3G24310.1 64.762 105 37 0 11 115 17 121 2.69e-44 151
Msa1366740 AT5G40350.1 60.550 109 43 0 12 120 17 125 7.21e-44 148
Msa1366740 AT3G27810.1 40.488 205 102 3 12 196 20 224 2.24e-43 147
Msa1366740 AT5G52260.1 48.795 166 73 3 13 175 13 169 8.38e-43 147
Msa1366740 AT5G14750.1 60.952 105 41 0 12 116 16 120 1.15e-42 145
Msa1366740 AT5G40330.1 61.538 104 40 0 13 116 13 116 3.65e-42 144
Msa1366740 AT4G25560.1 59.434 106 43 0 13 118 11 116 3.99e-42 146
Msa1366740 AT2G32460.1 56.410 117 50 1 11 127 17 132 6.90e-42 150
Msa1366740 AT2G32460.2 56.410 117 50 1 11 127 5 120 7.00e-42 150
Msa1366740 AT1G68320.1 56.757 111 48 0 12 122 19 129 1.32e-41 144
Msa1366740 AT5G55020.1 59.091 110 44 1 12 121 26 134 1.59e-41 149
Msa1366740 AT5G26660.2 58.594 128 46 3 45 167 14 139 1.99e-41 145
Msa1366740 AT3G46130.1 60.952 105 41 0 11 115 8 112 4.50e-41 142
Msa1366740 AT5G59780.3 61.538 104 40 0 12 115 8 111 4.69e-41 142
Msa1366740 AT3G27920.1 58.095 105 44 0 13 117 15 119 5.07e-41 141
Msa1366740 AT5G35550.1 54.762 126 53 1 12 137 14 135 5.69e-41 142
Msa1366740 AT5G06100.1 56.481 108 47 0 8 115 28 135 7.89e-41 146
Msa1366740 AT1G25340.1 53.913 115 53 0 13 127 19 133 1.34e-40 142
Msa1366740 AT3G06490.1 57.391 115 49 0 8 122 15 129 1.50e-40 143
Msa1366740 AT3G30210.1 60.577 104 41 0 11 114 26 129 1.62e-40 141
Msa1366740 AT5G06100.5 56.481 108 47 0 8 115 28 135 3.11e-40 146
Msa1366740 AT5G06100.2 56.481 108 47 0 8 115 28 135 3.11e-40 146
Msa1366740 AT5G06100.3 56.481 108 47 0 8 115 28 135 3.11e-40 146
Msa1366740 AT5G06100.4 56.481 108 47 0 8 115 28 135 3.11e-40 146
Msa1366740 AT1G48000.1 45.638 149 79 1 12 158 32 180 4.94e-40 139
Msa1366740 AT3G11440.2 56.731 104 45 0 12 115 41 144 5.25e-40 144
Msa1366740 AT3G11440.3 56.731 104 45 0 12 115 41 144 1.87e-39 144
Msa1366740 AT3G11440.4 56.731 104 45 0 12 115 41 144 1.87e-39 144
Msa1366740 AT3G11440.1 56.731 104 45 0 12 115 41 144 1.87e-39 144
Msa1366740 AT2G26960.1 43.889 180 98 3 9 188 17 193 2.90e-39 142
Msa1366740 AT3G53200.1 42.045 176 91 3 12 176 9 184 8.53e-39 136
Msa1366740 AT2G47190.1 53.153 111 52 0 12 122 20 130 1.37e-38 136
Msa1366740 AT5G52600.1 42.138 159 79 1 12 170 12 157 2.12e-38 134
Msa1366740 AT3G48920.1 50.820 122 55 1 13 134 19 135 2.63e-38 135
Msa1366740 AT4G26930.1 55.340 103 46 0 12 114 19 121 9.81e-38 137
Msa1366740 AT5G49620.1 53.043 115 54 0 8 122 22 136 1.57e-36 132
Msa1366740 AT1G25340.2 51.304 115 51 1 13 127 19 128 1.44e-35 129
Msa1366740 AT3G47600.2 52.273 132 49 2 24 145 22 149 2.61e-35 129
Msa1366740 AT1G25340.3 51.304 115 51 1 13 127 19 128 3.90e-35 128
Msa1366740 AT1G22640.3 50.000 132 62 1 59 186 2 133 1.57e-34 124
Msa1366740 AT1G66370.1 55.652 115 47 1 1 115 1 111 2.78e-34 124
Msa1366740 AT5G49620.2 47.287 129 54 1 8 122 22 150 6.93e-33 122
Msa1366740 AT1G66390.1 59.048 105 43 0 11 115 7 111 8.42e-32 118
Msa1366740 AT1G66380.1 58.095 105 44 0 11 115 7 111 1.48e-31 114
Msa1366740 AT5G35550.2 56.566 99 39 1 39 137 44 138 1.81e-31 117
Msa1366740 AT1G56650.1 52.381 126 52 1 11 128 7 132 2.39e-31 117
Msa1366740 AT3G27810.2 38.953 172 85 3 45 196 4 175 4.20e-31 114
Msa1366740 AT3G46130.3 70.833 72 21 0 44 115 9 80 5.12e-31 115
Msa1366740 AT5G59780.2 71.831 71 20 0 45 115 20 90 5.92e-31 115
Msa1366740 AT5G40350.2 65.789 76 26 0 45 120 5 80 6.00e-31 113
Msa1366740 AT3G46130.4 71.831 71 20 0 45 115 20 90 9.95e-31 115
Msa1366740 AT3G12820.2 71.831 71 20 0 48 118 2 72 1.29e-30 113
Msa1366740 AT5G14750.3 71.014 69 20 0 48 116 18 86 1.30e-30 112
Msa1366740 AT3G53200.2 44.755 143 68 3 45 176 9 151 2.51e-30 113
Msa1366740 AT1G18960.1 47.009 117 59 2 14 130 10 123 4.31e-29 112
Msa1366740 AT2G26950.1 45.000 120 64 2 14 133 18 135 2.05e-28 112
Msa1366740 AT3G60460.1 50.000 104 51 1 12 114 11 114 3.56e-28 110
Msa1366740 AT5G11050.1 44.737 114 57 3 3 115 97 205 1.03e-27 110
Msa1366740 AT5G58850.1 48.544 103 50 2 14 115 105 205 1.30e-27 110
Msa1366740 AT1G71030.2 58.442 77 32 0 51 127 5 81 4.79e-27 103
Msa1366740 AT1G71030.1 53.333 90 41 1 38 127 7 95 5.83e-27 103
Msa1366740 AT4G18770.1 47.170 106 53 2 14 118 217 320 2.60e-26 107
Msa1366740 AT3G27785.1 48.515 101 51 1 9 109 184 283 1.12e-25 105
Msa1366740 AT3G09230.1 36.813 182 92 4 14 180 55 228 2.03e-25 103
Msa1366740 AT5G02320.1 48.077 104 51 2 14 116 127 228 5.32e-25 104
Msa1366740 AT5G02320.2 48.077 104 51 2 14 116 127 228 5.32e-25 104
Msa1366740 AT5G02320.3 48.077 104 51 2 14 116 67 168 6.68e-25 103
Msa1366740 AT3G09370.1 47.573 103 51 2 14 115 130 230 1.36e-24 102
Msa1366740 AT3G09370.2 47.573 103 51 2 14 115 135 235 1.40e-24 102
Msa1366740 AT5G40360.1 42.857 105 58 2 12 116 156 258 1.82e-24 100
Msa1366740 AT3G09370.3 47.573 103 51 2 14 115 143 243 2.10e-24 102
Msa1366740 AT2G39880.1 47.170 106 47 2 14 115 50 150 3.92e-24 100
Msa1366740 AT4G37260.1 45.631 103 53 2 14 115 13 113 2.49e-23 97.4
Msa1366740 AT2G23290.1 47.573 103 51 2 14 115 13 113 3.44e-23 96.7
Msa1366740 AT5G11510.3 46.154 104 53 2 14 116 81 182 3.68e-23 99.4
Msa1366740 AT5G11510.1 46.154 104 53 2 14 116 81 182 3.68e-23 99.4
Msa1366740 AT5G11510.4 46.154 104 53 2 14 116 81 182 3.68e-23 99.4
Msa1366740 AT3G55730.1 44.860 107 56 2 14 119 56 160 4.69e-23 97.8
Msa1366740 AT5G11510.2 46.154 104 53 2 14 116 81 182 5.39e-23 98.6
Msa1366740 AT5G11510.5 46.154 104 53 2 14 116 81 182 5.53e-23 98.6
Msa1366740 AT5G67300.1 43.689 103 55 2 14 115 6 106 7.02e-23 95.9
Msa1366740 AT1G66380.3 61.644 73 28 0 43 115 6 78 1.46e-22 89.7
Msa1366740 AT3G50060.1 43.689 103 55 2 14 115 6 106 1.48e-22 94.7
Msa1366740 AT1G69560.1 43.119 109 59 2 9 116 102 208 2.99e-22 94.4
Msa1366740 AT1G69560.2 43.119 109 59 2 9 116 118 224 3.68e-22 94.4
Msa1366740 AT5G14750.4 67.241 58 19 0 59 116 2 59 5.69e-22 89.4
Msa1366740 AT5G14750.2 67.241 58 19 0 59 116 2 59 5.69e-22 89.4
Msa1366740 AT4G32730.5 44.231 104 55 2 14 116 87 188 8.91e-22 95.1
Msa1366740 AT4G32730.4 44.231 104 55 2 14 116 87 188 8.91e-22 95.1
Msa1366740 AT4G32730.3 44.231 104 55 2 14 116 87 188 8.91e-22 95.1
Msa1366740 AT4G32730.2 44.231 104 55 2 14 116 87 188 8.91e-22 95.1
Msa1366740 AT4G32730.1 44.231 104 55 2 14 116 87 188 9.12e-22 95.1
Msa1366740 AT3G23250.2 67.241 58 19 0 59 116 2 59 9.70e-22 91.3
Msa1366740 AT2G25230.1 33.862 189 101 6 9 190 21 192 1.06e-21 91.3
Msa1366740 AT1G17950.1 45.631 103 53 2 14 115 5 105 5.53e-21 89.7
Msa1366740 AT1G26780.2 43.269 104 56 2 14 116 98 199 3.07e-20 89.4
Msa1366740 AT1G26780.1 43.269 104 56 2 14 116 98 199 3.31e-20 88.2
Msa1366740 AT1G22640.2 45.631 103 52 1 88 186 16 118 7.97e-20 85.1
Msa1366740 AT1G73410.1 45.631 103 53 2 14 115 6 106 5.33e-19 84.0
Msa1366740 AT4G28110.2 78.049 41 9 0 88 128 4 44 5.97e-19 82.8
Msa1366740 AT5G61420.1 59.155 71 24 2 81 148 2 70 1.28e-18 84.0
Msa1366740 AT1G73410.2 45.631 103 53 2 14 115 6 106 1.65e-18 82.0
Msa1366740 AT4G33450.1 37.719 114 63 3 3 115 13 119 3.23e-18 82.0
Msa1366740 AT4G00540.2 41.284 109 58 3 12 116 101 207 5.49e-18 83.2
Msa1366740 AT4G00540.1 41.284 109 58 3 12 116 99 205 8.42e-18 82.8
Msa1366740 AT3G29020.1 36.538 104 63 2 14 116 65 166 1.05e-17 80.5
Msa1366740 AT3G29020.2 36.538 104 63 2 14 116 67 168 1.18e-17 81.3
Msa1366740 AT5G40430.1 35.714 112 70 1 9 120 49 158 1.32e-17 80.5
Msa1366740 AT5G17800.1 39.216 102 61 1 14 115 93 193 2.60e-17 80.5
Msa1366740 AT1G66380.2 51.190 84 41 0 11 94 7 90 3.38e-17 75.9
Msa1366740 AT5G15310.3 72.727 44 12 0 88 131 9 52 4.19e-17 79.0
Msa1366740 AT5G59780.1 69.565 46 14 0 70 115 1 46 1.09e-16 76.3
Msa1366740 AT2G37630.1 40.594 101 58 1 17 115 7 107 1.80e-16 78.6
Msa1366740 AT3G46130.2 69.565 46 14 0 70 115 1 46 2.19e-16 75.9
Msa1366740 AT5G14340.2 49.296 71 36 0 88 158 10 80 2.49e-15 72.8
Msa1366740 AT4G25560.2 54.000 50 23 0 69 118 1 50 5.56e-14 69.7
Msa1366740 AT5G39700.1 34.545 110 71 1 15 124 57 165 9.59e-14 68.6
Msa1366740 AT1G74650.3 67.442 43 14 0 77 119 1 43 1.63e-13 68.9
Msa1366740 AT3G28910.2 56.364 55 22 1 77 131 1 53 1.73e-13 68.9
Msa1366740 AT1G74430.2 51.613 62 29 1 77 137 7 68 2.60e-13 67.4
Msa1366740 AT1G14350.2 35.000 120 69 2 17 136 28 138 2.72e-13 69.7
Msa1366740 AT1G14350.1 35.000 120 69 2 17 136 28 138 2.72e-13 69.7
Msa1366740 AT2G02820.1 37.374 99 61 1 17 115 33 130 4.13e-12 66.2
Msa1366740 AT2G02820.2 37.374 99 61 1 17 115 33 130 4.14e-12 66.2
Msa1366740 AT2G02820.3 37.374 99 61 1 17 115 33 130 4.46e-12 65.9

Find 76 sgRNAs with CRISPR-Local

Find 224 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATACTTTCTTCCAATTAAT+TGG 0.155598 tig0018481:+98767 Msa1366740:three_prime_UTR
TATGAATAAGTAAGTATATT+TGG 0.211575 tig0018481:+98561 Msa1366740:three_prime_UTR
ATAAAATTACACCAATTAAT+TGG 0.231851 tig0018481:-98778 None:intergenic
CATCAGTTTCCTTCACTTCA+TGG 0.233477 tig0018481:-98198 None:intergenic
GATGTTTAATTTGAAAATAA+TGG 0.248735 tig0018481:+98881 Msa1366740:three_prime_UTR
AGTGTTTCAAAGAATGTTCT+TGG 0.272409 tig0018481:+98647 Msa1366740:three_prime_UTR
TTCACTTCATGGTTGTTAAC+AGG 0.301922 tig0018481:-98187 None:intergenic
TCCCCAGCTGAAAATTCTTC+TGG 0.318088 tig0018481:+98253 Msa1366740:CDS
CTTGCATTGGTCGTGAGTTA+TGG 0.323676 tig0018481:+97216 Msa1366740:exon
ACCATTGGTGGAAGCCCTTT+GGG 0.330830 tig0018481:+98348 Msa1366740:CDS
TCCATGCCCGCCTCGGCAAC+AGG 0.332350 tig0018481:+97476 Msa1366740:CDS
GACTTTGGTATTCATGACTT+TGG 0.334362 tig0018481:+98466 Msa1366740:CDS
TTCAAAGGTTCATGAGTAAT+GGG 0.340405 tig0018481:-98106 None:intergenic
CGCCGAAGGCCGGCAAGTTT+AGG 0.348205 tig0018481:-97355 None:intergenic
CACCATTGGTGGAAGCCCTT+TGG 0.357777 tig0018481:+98347 Msa1366740:CDS
TCAAGTACACTGCAAACTAT+AGG 0.364172 tig0018481:+98514 Msa1366740:CDS
ATTCTCTAATGAATAGTATA+TGG 0.364682 tig0018481:+98314 Msa1366740:CDS
TGCCTAAACTTGCCGGCCTT+CGG 0.372731 tig0018481:+97353 Msa1366740:CDS
AATCTCATTGTCTGTTCTCC+CGG 0.377399 tig0018481:-98029 None:intergenic
TGTCAAAGTAAGATTATTAG+AGG 0.380952 tig0018481:+98827 Msa1366740:three_prime_UTR
GGTGGAAGCCCTTTGGGAAA+TGG 0.381456 tig0018481:+98354 Msa1366740:CDS
TTGTCTTCCTCAGCTGTCCA+TGG 0.396088 tig0018481:-97280 None:intergenic
CGTGCTGTGCCTAAACTTGC+CGG 0.397024 tig0018481:+97346 Msa1366740:CDS
TTGCATTGGTCGTGAGTTAT+GGG 0.403780 tig0018481:+97217 Msa1366740:exon
CTATTTGATTGTCAAGACTT+TGG 0.405379 tig0018481:+98451 Msa1366740:CDS
ACCTGTTGCCGAGGCGGGCA+TGG 0.410972 tig0018481:-97477 None:intergenic
ATTCAAAGGTTCATGAGTAA+TGG 0.432527 tig0018481:-98107 None:intergenic
CAAAGAATGTTCTTGGAAAG+TGG 0.445187 tig0018481:+98654 Msa1366740:three_prime_UTR
CAAGTACACTGCAAACTATA+GGG 0.456076 tig0018481:+98515 Msa1366740:CDS
AGGAGACCTCTCTTTAAATC+AGG 0.457518 tig0018481:-97421 None:intergenic
AAGATTGCTTCACGGTTACC+CGG 0.461826 tig0018481:+98010 Msa1366740:CDS
AGAAAACCTGTTGCCGAGGC+GGG 0.462467 tig0018481:-97482 None:intergenic
GATGATGCTTGTTTATTCAA+AGG 0.463222 tig0018481:-98121 None:intergenic
GGATGAAGTACTACTATCAT+TGG 0.464276 tig0018481:-98143 None:intergenic
TTACCAATGGACAATGTTGT+TGG 0.466351 tig0018481:+97323 Msa1366740:CDS
CTTACCGCAGCGCCGAAGGC+CGG 0.466439 tig0018481:-97365 None:intergenic
CTTGGGAGGATAATTGTGCT+TGG 0.466595 tig0018481:+98428 Msa1366740:CDS
GTAAGAGCTGTCGTCTTCGT+TGG 0.481721 tig0018481:+97383 Msa1366740:CDS
TCCCAAAGGGCTTCCACCAA+TGG 0.485135 tig0018481:-98349 None:intergenic
AAGGTGTGGGCTATATATAA+AGG 0.497898 tig0018481:+97152 None:intergenic
TGTAGTGTCCATTTCCCAAA+GGG 0.498177 tig0018481:-98362 None:intergenic
AGCTCTTACCGCAGCGCCGA+AGG 0.506544 tig0018481:-97369 None:intergenic
TTCACTAGGAACATCATAAG+AGG 0.511097 tig0018481:-98690 None:intergenic
GCTATATATAAAGGCAGTGT+TGG 0.516067 tig0018481:+97161 Msa1366740:five_prime_UTR
CTTCGTCCTGATTTAAAGAG+AGG 0.516437 tig0018481:+97415 Msa1366740:CDS
ATCTCATTGTCTGTTCTCCC+GGG 0.520189 tig0018481:-98028 None:intergenic
TCTAATGAATAGTATATGGT+TGG 0.521314 tig0018481:+98318 Msa1366740:CDS
TTACTTTGAAGGACTTGCAT+TGG 0.523681 tig0018481:+97203 Msa1366740:five_prime_UTR
ATTGATCTCCATGCCCGCCT+CGG 0.531323 tig0018481:+97469 Msa1366740:CDS
ACTGCAAACTATAGGGATGA+AGG 0.532537 tig0018481:+98522 Msa1366740:CDS
AGGTCTCCTCACTGAAGCAG+AGG 0.546557 tig0018481:+97435 Msa1366740:CDS
GGTGGTCGAAGATTGCTTCA+CGG 0.554833 tig0018481:+98002 Msa1366740:intron
ATGAAGTGAAGGAAACTGAT+GGG 0.557455 tig0018481:+98200 Msa1366740:CDS
CATGAAGTGAAGGAAACTGA+TGG 0.577027 tig0018481:+98199 Msa1366740:CDS
GACAAACTTGGTGTGAAGAA+AGG 0.580734 tig0018481:+97256 Msa1366740:CDS
GAATGTTCTTGGAAAGTGGA+AGG 0.586986 tig0018481:+98658 Msa1366740:three_prime_UTR
GCACAATTATCCTCCCAAGA+AGG 0.588656 tig0018481:-98424 None:intergenic
AGATTGCTTCACGGTTACCC+GGG 0.595542 tig0018481:+98011 Msa1366740:CDS
TTGGTGTGAAGAAAGGTCCA+TGG 0.601705 tig0018481:+97263 Msa1366740:CDS
CAACCTTGTTGTGACAAACT+TGG 0.602134 tig0018481:+97244 Msa1366740:CDS
TAGAAAACCTGTTGCCGAGG+CGG 0.604099 tig0018481:-97483 None:intergenic
GTCAAAGTAAGATTATTAGA+GGG 0.607381 tig0018481:+98828 Msa1366740:three_prime_UTR
ACGCCAACAACATTGTCCAT+TGG 0.609352 tig0018481:-97326 None:intergenic
TAGGAACATCATAAGAGGAA+AGG 0.611121 tig0018481:-98685 None:intergenic
TGTTAACAACCATGAAGTGA+AGG 0.612004 tig0018481:+98189 Msa1366740:CDS
GTTGGATGAAACACCATTGG+TGG 0.620513 tig0018481:+98336 Msa1366740:CDS
TGCATTGGTCGTGAGTTATG+GGG 0.622319 tig0018481:+97218 Msa1366740:exon
AAATAGAAAACCTGTTGCCG+AGG 0.625200 tig0018481:-97486 None:intergenic
ACACCAAGTTTGTCACAACA+AGG 0.629808 tig0018481:-97247 None:intergenic
GTGTAGTGTCCATTTCCCAA+AGG 0.630743 tig0018481:-98363 None:intergenic
GAAAGGTCCATGGACAGCTG+AGG 0.648683 tig0018481:+97273 Msa1366740:CDS
ACTAAATAAAACTCAACACA+AGG 0.652484 tig0018481:-98623 None:intergenic
ATGGTTGGATGAAACACCAT+TGG 0.670766 tig0018481:+98333 Msa1366740:CDS
TGATGGGGTTGTCAACTCAG+AGG 0.704259 tig0018481:+98216 Msa1366740:CDS
GCTGCTCCTCTGCTTCAGTG+AGG 0.712120 tig0018481:-97441 None:intergenic
TGAAGTGAAGGAAACTGATG+GGG 0.739601 tig0018481:+98201 Msa1366740:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTATTGATGTTAAAAGT+AGG + tig0018481:97746-97765 Msa1366740:intron 15.0%
!! TATGAATAAGTAAGTATATT+TGG + tig0018481:98561-98580 Msa1366740:three_prime_UTR 15.0%
!! ATAAAATTACACCAATTAAT+TGG - tig0018481:98781-98800 None:intergenic 15.0%
!!! GATGTTTAATTTGAAAATAA+TGG + tig0018481:98881-98900 Msa1366740:three_prime_UTR 15.0%
!! TTATTATTGATGTTAAAAGT+AGG + tig0018481:97746-97765 Msa1366740:intron 15.0%
!! TATGAATAAGTAAGTATATT+TGG + tig0018481:98561-98580 Msa1366740:three_prime_UTR 15.0%
!! ATAAAATTACACCAATTAAT+TGG - tig0018481:98781-98800 None:intergenic 15.0%
!!! GATGTTTAATTTGAAAATAA+TGG + tig0018481:98881-98900 Msa1366740:three_prime_UTR 15.0%
!!! TGTATTTTATGTGTTTATGT+TGG - tig0018481:97616-97635 None:intergenic 20.0%
!!! AAGAATTTTGCTGTAAAAAA+CGG - tig0018481:97657-97676 None:intergenic 20.0%
!! ACAATGAGATTAAAAATCAT+TGG + tig0018481:98041-98060 Msa1366740:CDS 20.0%
!! ATTCTCTAATGAATAGTATA+TGG + tig0018481:98314-98333 Msa1366740:CDS 20.0%
!!! TTTTTTGTATTTTCTGCTAT+AGG - tig0018481:98388-98407 None:intergenic 20.0%
!!! TTGCTATCATTTTTTTGATT+TGG - tig0018481:98716-98735 None:intergenic 20.0%
!! TATACTTTCTTCCAATTAAT+TGG + tig0018481:98767-98786 Msa1366740:three_prime_UTR 20.0%
!!! TGTATTTTATGTGTTTATGT+TGG - tig0018481:97616-97635 None:intergenic 20.0%
!!! AAGAATTTTGCTGTAAAAAA+CGG - tig0018481:97657-97676 None:intergenic 20.0%
!! ACAATGAGATTAAAAATCAT+TGG + tig0018481:98041-98060 Msa1366740:CDS 20.0%
!! ATTCTCTAATGAATAGTATA+TGG + tig0018481:98314-98333 Msa1366740:CDS 20.0%
!!! TTTTTTGTATTTTCTGCTAT+AGG - tig0018481:98388-98407 None:intergenic 20.0%
!!! TTGCTATCATTTTTTTGATT+TGG - tig0018481:98716-98735 None:intergenic 20.0%
!! TATACTTTCTTCCAATTAAT+TGG + tig0018481:98767-98786 Msa1366740:three_prime_UTR 20.0%
!!! TTACTTTTGCATTACTTTGA+AGG + tig0018481:97192-97211 Msa1366740:five_prime_UTR 25.0%
!!! ATCACTTTTATTCTTACCAA+TGG + tig0018481:97310-97329 Msa1366740:CDS 25.0%
! AGACATGTTAATTGAATTGA+AGG - tig0018481:97723-97742 None:intergenic 25.0%
! TTATTGATGTTAAAAGTAGG+TGG + tig0018481:97749-97768 Msa1366740:intron 25.0%
! TATTGATGTTAAAAGTAGGT+GGG + tig0018481:97750-97769 Msa1366740:intron 25.0%
!! TTTTATATCATGTCTTAGAC+AGG + tig0018481:97775-97794 Msa1366740:intron 25.0%
! TTTATATCATGTCTTAGACA+GGG + tig0018481:97776-97795 Msa1366740:intron 25.0%
! CATAGACTAATTTATTACGT+TGG + tig0018481:97944-97963 Msa1366740:intron 25.0%
! AAGAAAAAGCTCATTAAGAT+GGG + tig0018481:98076-98095 Msa1366740:CDS 25.0%
! TCTAATGAATAGTATATGGT+TGG + tig0018481:98318-98337 Msa1366740:CDS 25.0%
! ACTAAATAAAACTCAACACA+AGG - tig0018481:98626-98645 None:intergenic 25.0%
!!! TTTTTTTGATTTGGTTCACT+AGG - tig0018481:98707-98726 None:intergenic 25.0%
!! TGTAGCATTACCATTATTTT+TGG - tig0018481:98740-98759 None:intergenic 25.0%
! TGTCAAAGTAAGATTATTAG+AGG + tig0018481:98827-98846 Msa1366740:three_prime_UTR 25.0%
! GTCAAAGTAAGATTATTAGA+GGG + tig0018481:98828-98847 Msa1366740:three_prime_UTR 25.0%
!!! TTACTTTTGCATTACTTTGA+AGG + tig0018481:97192-97211 Msa1366740:five_prime_UTR 25.0%
!!! ATCACTTTTATTCTTACCAA+TGG + tig0018481:97310-97329 Msa1366740:CDS 25.0%
! AGACATGTTAATTGAATTGA+AGG - tig0018481:97723-97742 None:intergenic 25.0%
! TTATTGATGTTAAAAGTAGG+TGG + tig0018481:97749-97768 Msa1366740:intron 25.0%
! TATTGATGTTAAAAGTAGGT+GGG + tig0018481:97750-97769 Msa1366740:intron 25.0%
!! TTTTATATCATGTCTTAGAC+AGG + tig0018481:97775-97794 Msa1366740:intron 25.0%
! TTTATATCATGTCTTAGACA+GGG + tig0018481:97776-97795 Msa1366740:intron 25.0%
! CATAGACTAATTTATTACGT+TGG + tig0018481:97944-97963 Msa1366740:intron 25.0%
! AAGAAAAAGCTCATTAAGAT+GGG + tig0018481:98076-98095 Msa1366740:CDS 25.0%
! TCTAATGAATAGTATATGGT+TGG + tig0018481:98318-98337 Msa1366740:CDS 25.0%
! ACTAAATAAAACTCAACACA+AGG - tig0018481:98626-98645 None:intergenic 25.0%
!!! TTTTTTTGATTTGGTTCACT+AGG - tig0018481:98707-98726 None:intergenic 25.0%
!! TGTAGCATTACCATTATTTT+TGG - tig0018481:98740-98759 None:intergenic 25.0%
! TGTCAAAGTAAGATTATTAG+AGG + tig0018481:98827-98846 Msa1366740:three_prime_UTR 25.0%
! GTCAAAGTAAGATTATTAGA+GGG + tig0018481:98828-98847 Msa1366740:three_prime_UTR 25.0%
! GTGTTTATGTTGGTTGTATA+AGG - tig0018481:97606-97625 None:intergenic 30.0%
! CTAATTTATTACGTTGGTGA+TGG + tig0018481:97950-97969 Msa1366740:intron 30.0%
ATATAGTTGATTGTTGTCTC+AGG + tig0018481:97981-98000 Msa1366740:intron 30.0%
CAAGAAAAAGCTCATTAAGA+TGG + tig0018481:98075-98094 Msa1366740:CDS 30.0%
TTCAAAGGTTCATGAGTAAT+GGG - tig0018481:98109-98128 None:intergenic 30.0%
ATTCAAAGGTTCATGAGTAA+TGG - tig0018481:98110-98129 None:intergenic 30.0%
GATGATGCTTGTTTATTCAA+AGG - tig0018481:98124-98143 None:intergenic 30.0%
! ACATGAATTTTATGCCTTCT+TGG + tig0018481:98410-98429 Msa1366740:CDS 30.0%
! CATGAATTTTATGCCTTCTT+GGG + tig0018481:98411-98430 Msa1366740:CDS 30.0%
CTATTTGATTGTCAAGACTT+TGG + tig0018481:98451-98470 Msa1366740:CDS 30.0%
AGTGTTTCAAAGAATGTTCT+TGG + tig0018481:98647-98666 Msa1366740:three_prime_UTR 30.0%
TGATAGCAAGCCAAAAATAA+TGG + tig0018481:98727-98746 Msa1366740:three_prime_UTR 30.0%
! GTGTTTATGTTGGTTGTATA+AGG - tig0018481:97606-97625 None:intergenic 30.0%
! CTAATTTATTACGTTGGTGA+TGG + tig0018481:97950-97969 Msa1366740:intron 30.0%
ATATAGTTGATTGTTGTCTC+AGG + tig0018481:97981-98000 Msa1366740:intron 30.0%
CAAGAAAAAGCTCATTAAGA+TGG + tig0018481:98075-98094 Msa1366740:CDS 30.0%
TTCAAAGGTTCATGAGTAAT+GGG - tig0018481:98109-98128 None:intergenic 30.0%
ATTCAAAGGTTCATGAGTAA+TGG - tig0018481:98110-98129 None:intergenic 30.0%
GATGATGCTTGTTTATTCAA+AGG - tig0018481:98124-98143 None:intergenic 30.0%
! ACATGAATTTTATGCCTTCT+TGG + tig0018481:98410-98429 Msa1366740:CDS 30.0%
! CATGAATTTTATGCCTTCTT+GGG + tig0018481:98411-98430 Msa1366740:CDS 30.0%
CTATTTGATTGTCAAGACTT+TGG + tig0018481:98451-98470 Msa1366740:CDS 30.0%
AGTGTTTCAAAGAATGTTCT+TGG + tig0018481:98647-98666 Msa1366740:three_prime_UTR 30.0%
TGATAGCAAGCCAAAAATAA+TGG + tig0018481:98727-98746 Msa1366740:three_prime_UTR 30.0%
GCTATATATAAAGGCAGTGT+TGG + tig0018481:97161-97180 Msa1366740:five_prime_UTR 35.0%
! TTACTTTGAAGGACTTGCAT+TGG + tig0018481:97203-97222 Msa1366740:five_prime_UTR 35.0%
TTACCAATGGACAATGTTGT+TGG + tig0018481:97323-97342 Msa1366740:CDS 35.0%
! GGATGAAGTACTACTATCAT+TGG - tig0018481:98146-98165 None:intergenic 35.0%
TTCACTTCATGGTTGTTAAC+AGG - tig0018481:98190-98209 None:intergenic 35.0%
TGTTAACAACCATGAAGTGA+AGG + tig0018481:98189-98208 Msa1366740:CDS 35.0%
ATGAAGTGAAGGAAACTGAT+GGG + tig0018481:98200-98219 Msa1366740:CDS 35.0%
GACTTTGGTATTCATGACTT+TGG + tig0018481:98466-98485 Msa1366740:CDS 35.0%
TCAAGTACACTGCAAACTAT+AGG + tig0018481:98514-98533 Msa1366740:CDS 35.0%
CAAGTACACTGCAAACTATA+GGG + tig0018481:98515-98534 Msa1366740:CDS 35.0%
CAAAGAATGTTCTTGGAAAG+TGG + tig0018481:98654-98673 Msa1366740:three_prime_UTR 35.0%
TAGGAACATCATAAGAGGAA+AGG - tig0018481:98688-98707 None:intergenic 35.0%
TTCACTAGGAACATCATAAG+AGG - tig0018481:98693-98712 None:intergenic 35.0%
GCTATATATAAAGGCAGTGT+TGG + tig0018481:97161-97180 Msa1366740:five_prime_UTR 35.0%
! TTACTTTGAAGGACTTGCAT+TGG + tig0018481:97203-97222 Msa1366740:five_prime_UTR 35.0%
TTACCAATGGACAATGTTGT+TGG + tig0018481:97323-97342 Msa1366740:CDS 35.0%
! GGATGAAGTACTACTATCAT+TGG - tig0018481:98146-98165 None:intergenic 35.0%
TTCACTTCATGGTTGTTAAC+AGG - tig0018481:98190-98209 None:intergenic 35.0%
TGTTAACAACCATGAAGTGA+AGG + tig0018481:98189-98208 Msa1366740:CDS 35.0%
ATGAAGTGAAGGAAACTGAT+GGG + tig0018481:98200-98219 Msa1366740:CDS 35.0%
GACTTTGGTATTCATGACTT+TGG + tig0018481:98466-98485 Msa1366740:CDS 35.0%
TCAAGTACACTGCAAACTAT+AGG + tig0018481:98514-98533 Msa1366740:CDS 35.0%
CAAGTACACTGCAAACTATA+GGG + tig0018481:98515-98534 Msa1366740:CDS 35.0%
CAAAGAATGTTCTTGGAAAG+TGG + tig0018481:98654-98673 Msa1366740:three_prime_UTR 35.0%
TAGGAACATCATAAGAGGAA+AGG - tig0018481:98688-98707 None:intergenic 35.0%
TTCACTAGGAACATCATAAG+AGG - tig0018481:98693-98712 None:intergenic 35.0%
! TTGCATTGGTCGTGAGTTAT+GGG + tig0018481:97217-97236 Msa1366740:exon 40.0%
! CAACCTTGTTGTGACAAACT+TGG + tig0018481:97244-97263 Msa1366740:CDS 40.0%
ACACCAAGTTTGTCACAACA+AGG - tig0018481:97250-97269 None:intergenic 40.0%
!! GACAAACTTGGTGTGAAGAA+AGG + tig0018481:97256-97275 Msa1366740:CDS 40.0%
CTTCGTCCTGATTTAAAGAG+AGG + tig0018481:97415-97434 Msa1366740:CDS 40.0%
AGGAGACCTCTCTTTAAATC+AGG - tig0018481:97424-97443 None:intergenic 40.0%
AAATAGAAAACCTGTTGCCG+AGG - tig0018481:97489-97508 None:intergenic 40.0%
! TCTTAGACAGGGTTTTCTTG+TGG + tig0018481:97787-97806 Msa1366740:intron 40.0%
TTAGTCTATGCAATTGCGCA+CGG - tig0018481:97934-97953 None:intergenic 40.0%
TAGTTGATTGTTGTCTCAGG+TGG + tig0018481:97984-98003 Msa1366740:intron 40.0%
AATCTCATTGTCTGTTCTCC+CGG - tig0018481:98032-98051 None:intergenic 40.0%
CATCAGTTTCCTTCACTTCA+TGG - tig0018481:98201-98220 None:intergenic 40.0%
CATGAAGTGAAGGAAACTGA+TGG + tig0018481:98199-98218 Msa1366740:CDS 40.0%
TGAAGTGAAGGAAACTGATG+GGG + tig0018481:98201-98220 Msa1366740:CDS 40.0%
! TCCAGAAGAATTTTCAGCTG+GGG - tig0018481:98257-98276 None:intergenic 40.0%
! CTCCAGAAGAATTTTCAGCT+GGG - tig0018481:98258-98277 None:intergenic 40.0%
! TCTCCAGAAGAATTTTCAGC+TGG - tig0018481:98259-98278 None:intergenic 40.0%
ATGGTTGGATGAAACACCAT+TGG + tig0018481:98333-98352 Msa1366740:CDS 40.0%
TGTAGTGTCCATTTCCCAAA+GGG - tig0018481:98365-98384 None:intergenic 40.0%
! GAATTTTATGCCTTCTTGGG+AGG + tig0018481:98414-98433 Msa1366740:CDS 40.0%
ACTGCAAACTATAGGGATGA+AGG + tig0018481:98522-98541 Msa1366740:CDS 40.0%
!!! GGAGCTTCAATTTTAGCTCA+TGG - tig0018481:98605-98624 None:intergenic 40.0%
GAATGTTCTTGGAAAGTGGA+AGG + tig0018481:98658-98677 Msa1366740:three_prime_UTR 40.0%
! TTGCATTGGTCGTGAGTTAT+GGG + tig0018481:97217-97236 Msa1366740:exon 40.0%
! CAACCTTGTTGTGACAAACT+TGG + tig0018481:97244-97263 Msa1366740:CDS 40.0%
ACACCAAGTTTGTCACAACA+AGG - tig0018481:97250-97269 None:intergenic 40.0%
!! GACAAACTTGGTGTGAAGAA+AGG + tig0018481:97256-97275 Msa1366740:CDS 40.0%
CTTCGTCCTGATTTAAAGAG+AGG + tig0018481:97415-97434 Msa1366740:CDS 40.0%
AGGAGACCTCTCTTTAAATC+AGG - tig0018481:97424-97443 None:intergenic 40.0%
AAATAGAAAACCTGTTGCCG+AGG - tig0018481:97489-97508 None:intergenic 40.0%
! TCTTAGACAGGGTTTTCTTG+TGG + tig0018481:97787-97806 Msa1366740:intron 40.0%
TTAGTCTATGCAATTGCGCA+CGG - tig0018481:97934-97953 None:intergenic 40.0%
TAGTTGATTGTTGTCTCAGG+TGG + tig0018481:97984-98003 Msa1366740:intron 40.0%
AATCTCATTGTCTGTTCTCC+CGG - tig0018481:98032-98051 None:intergenic 40.0%
CATCAGTTTCCTTCACTTCA+TGG - tig0018481:98201-98220 None:intergenic 40.0%
CATGAAGTGAAGGAAACTGA+TGG + tig0018481:98199-98218 Msa1366740:CDS 40.0%
TGAAGTGAAGGAAACTGATG+GGG + tig0018481:98201-98220 Msa1366740:CDS 40.0%
! TCCAGAAGAATTTTCAGCTG+GGG - tig0018481:98257-98276 None:intergenic 40.0%
! CTCCAGAAGAATTTTCAGCT+GGG - tig0018481:98258-98277 None:intergenic 40.0%
! TCTCCAGAAGAATTTTCAGC+TGG - tig0018481:98259-98278 None:intergenic 40.0%
ATGGTTGGATGAAACACCAT+TGG + tig0018481:98333-98352 Msa1366740:CDS 40.0%
TGTAGTGTCCATTTCCCAAA+GGG - tig0018481:98365-98384 None:intergenic 40.0%
! GAATTTTATGCCTTCTTGGG+AGG + tig0018481:98414-98433 Msa1366740:CDS 40.0%
ACTGCAAACTATAGGGATGA+AGG + tig0018481:98522-98541 Msa1366740:CDS 40.0%
!!! GGAGCTTCAATTTTAGCTCA+TGG - tig0018481:98605-98624 None:intergenic 40.0%
GAATGTTCTTGGAAAGTGGA+AGG + tig0018481:98658-98677 Msa1366740:three_prime_UTR 40.0%
! CTTGCATTGGTCGTGAGTTA+TGG + tig0018481:97216-97235 Msa1366740:exon 45.0%
! TGCATTGGTCGTGAGTTATG+GGG + tig0018481:97218-97237 Msa1366740:exon 45.0%
TTGGTGTGAAGAAAGGTCCA+TGG + tig0018481:97263-97282 Msa1366740:CDS 45.0%
ACGCCAACAACATTGTCCAT+TGG - tig0018481:97329-97348 None:intergenic 45.0%
AAGATTGCTTCACGGTTACC+CGG + tig0018481:98010-98029 Msa1366740:CDS 45.0%
ATCTCATTGTCTGTTCTCCC+GGG - tig0018481:98031-98050 None:intergenic 45.0%
! CTGTGACGAATTTTCTGCAG+GGG - tig0018481:98167-98186 None:intergenic 45.0%
! GCTGTGACGAATTTTCTGCA+GGG - tig0018481:98168-98187 None:intergenic 45.0%
TCCCCAGCTGAAAATTCTTC+TGG + tig0018481:98253-98272 Msa1366740:CDS 45.0%
GTTGGATGAAACACCATTGG+TGG + tig0018481:98336-98355 Msa1366740:CDS 45.0%
GTGTAGTGTCCATTTCCCAA+AGG - tig0018481:98366-98385 None:intergenic 45.0%
GCACAATTATCCTCCCAAGA+AGG - tig0018481:98427-98446 None:intergenic 45.0%
CTTGGGAGGATAATTGTGCT+TGG + tig0018481:98428-98447 Msa1366740:CDS 45.0%
! CTTGCATTGGTCGTGAGTTA+TGG + tig0018481:97216-97235 Msa1366740:exon 45.0%
! TGCATTGGTCGTGAGTTATG+GGG + tig0018481:97218-97237 Msa1366740:exon 45.0%
TTGGTGTGAAGAAAGGTCCA+TGG + tig0018481:97263-97282 Msa1366740:CDS 45.0%
ACGCCAACAACATTGTCCAT+TGG - tig0018481:97329-97348 None:intergenic 45.0%
AAGATTGCTTCACGGTTACC+CGG + tig0018481:98010-98029 Msa1366740:CDS 45.0%
ATCTCATTGTCTGTTCTCCC+GGG - tig0018481:98031-98050 None:intergenic 45.0%
! CTGTGACGAATTTTCTGCAG+GGG - tig0018481:98167-98186 None:intergenic 45.0%
! GCTGTGACGAATTTTCTGCA+GGG - tig0018481:98168-98187 None:intergenic 45.0%
TCCCCAGCTGAAAATTCTTC+TGG + tig0018481:98253-98272 Msa1366740:CDS 45.0%
GTTGGATGAAACACCATTGG+TGG + tig0018481:98336-98355 Msa1366740:CDS 45.0%
GTGTAGTGTCCATTTCCCAA+AGG - tig0018481:98366-98385 None:intergenic 45.0%
GCACAATTATCCTCCCAAGA+AGG - tig0018481:98427-98446 None:intergenic 45.0%
CTTGGGAGGATAATTGTGCT+TGG + tig0018481:98428-98447 Msa1366740:CDS 45.0%
!!! TTATTATTTTTTTGTAAATA+TGG + tig0018481:97901-97920 Msa1366740:intron 5.0%
!!! TTATTATTTTTTTGTAAATA+TGG + tig0018481:97901-97920 Msa1366740:intron 5.0%
TTGTCTTCCTCAGCTGTCCA+TGG - tig0018481:97283-97302 None:intergenic 50.0%
GTAAGAGCTGTCGTCTTCGT+TGG + tig0018481:97383-97402 Msa1366740:CDS 50.0%
TAGAAAACCTGTTGCCGAGG+CGG - tig0018481:97486-97505 None:intergenic 50.0%
GGTGGTCGAAGATTGCTTCA+CGG + tig0018481:98002-98021 Msa1366740:intron 50.0%
AGATTGCTTCACGGTTACCC+GGG + tig0018481:98011-98030 Msa1366740:CDS 50.0%
! GGCTGTGACGAATTTTCTGC+AGG - tig0018481:98169-98188 None:intergenic 50.0%
TGATGGGGTTGTCAACTCAG+AGG + tig0018481:98216-98235 Msa1366740:CDS 50.0%
ACCATTGGTGGAAGCCCTTT+GGG + tig0018481:98348-98367 Msa1366740:CDS 50.0%
TTGTCTTCCTCAGCTGTCCA+TGG - tig0018481:97283-97302 None:intergenic 50.0%
GTAAGAGCTGTCGTCTTCGT+TGG + tig0018481:97383-97402 Msa1366740:CDS 50.0%
TAGAAAACCTGTTGCCGAGG+CGG - tig0018481:97486-97505 None:intergenic 50.0%
GGTGGTCGAAGATTGCTTCA+CGG + tig0018481:98002-98021 Msa1366740:intron 50.0%
AGATTGCTTCACGGTTACCC+GGG + tig0018481:98011-98030 Msa1366740:CDS 50.0%
! GGCTGTGACGAATTTTCTGC+AGG - tig0018481:98169-98188 None:intergenic 50.0%
TGATGGGGTTGTCAACTCAG+AGG + tig0018481:98216-98235 Msa1366740:CDS 50.0%
ACCATTGGTGGAAGCCCTTT+GGG + tig0018481:98348-98367 Msa1366740:CDS 50.0%
GAAAGGTCCATGGACAGCTG+AGG + tig0018481:97273-97292 Msa1366740:CDS 55.0%
CGTGCTGTGCCTAAACTTGC+CGG + tig0018481:97346-97365 Msa1366740:CDS 55.0%
TGCCTAAACTTGCCGGCCTT+CGG + tig0018481:97353-97372 Msa1366740:CDS 55.0%
AGGTCTCCTCACTGAAGCAG+AGG + tig0018481:97435-97454 Msa1366740:CDS 55.0%
ATTGATCTCCATGCCCGCCT+CGG + tig0018481:97469-97488 Msa1366740:CDS 55.0%
AGAAAACCTGTTGCCGAGGC+GGG - tig0018481:97485-97504 None:intergenic 55.0%
CACCATTGGTGGAAGCCCTT+TGG + tig0018481:98347-98366 Msa1366740:CDS 55.0%
TCCCAAAGGGCTTCCACCAA+TGG - tig0018481:98352-98371 None:intergenic 55.0%
! GGTGGAAGCCCTTTGGGAAA+TGG + tig0018481:98354-98373 Msa1366740:CDS 55.0%
GAAAGGTCCATGGACAGCTG+AGG + tig0018481:97273-97292 Msa1366740:CDS 55.0%
CGTGCTGTGCCTAAACTTGC+CGG + tig0018481:97346-97365 Msa1366740:CDS 55.0%
TGCCTAAACTTGCCGGCCTT+CGG + tig0018481:97353-97372 Msa1366740:CDS 55.0%
AGGTCTCCTCACTGAAGCAG+AGG + tig0018481:97435-97454 Msa1366740:CDS 55.0%
ATTGATCTCCATGCCCGCCT+CGG + tig0018481:97469-97488 Msa1366740:CDS 55.0%
AGAAAACCTGTTGCCGAGGC+GGG - tig0018481:97485-97504 None:intergenic 55.0%
CACCATTGGTGGAAGCCCTT+TGG + tig0018481:98347-98366 Msa1366740:CDS 55.0%
TCCCAAAGGGCTTCCACCAA+TGG - tig0018481:98352-98371 None:intergenic 55.0%
! GGTGGAAGCCCTTTGGGAAA+TGG + tig0018481:98354-98373 Msa1366740:CDS 55.0%
GCTGCTCCTCTGCTTCAGTG+AGG - tig0018481:97444-97463 None:intergenic 60.0%
GCTGCTCCTCTGCTTCAGTG+AGG - tig0018481:97444-97463 None:intergenic 60.0%
CGCCGAAGGCCGGCAAGTTT+AGG - tig0018481:97358-97377 None:intergenic 65.0%
! AGCTCTTACCGCAGCGCCGA+AGG - tig0018481:97372-97391 None:intergenic 65.0%
CGCCGAAGGCCGGCAAGTTT+AGG - tig0018481:97358-97377 None:intergenic 65.0%
! AGCTCTTACCGCAGCGCCGA+AGG - tig0018481:97372-97391 None:intergenic 65.0%
! CTTACCGCAGCGCCGAAGGC+CGG - tig0018481:97368-97387 None:intergenic 70.0%
TCCATGCCCGCCTCGGCAAC+AGG + tig0018481:97476-97495 Msa1366740:CDS 70.0%
ACCTGTTGCCGAGGCGGGCA+TGG - tig0018481:97480-97499 None:intergenic 70.0%
! CTTACCGCAGCGCCGAAGGC+CGG - tig0018481:97368-97387 None:intergenic 70.0%
TCCATGCCCGCCTCGGCAAC+AGG + tig0018481:97476-97495 Msa1366740:CDS 70.0%
ACCTGTTGCCGAGGCGGGCA+TGG - tig0018481:97480-97499 None:intergenic 70.0%
CTTGCCGGCCTTCGGCGCTG+CGG + tig0018481:97361-97380 Msa1366740:CDS 75.0%
CTTGCCGGCCTTCGGCGCTG+CGG + tig0018481:97361-97380 Msa1366740:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0018481 gene 97161 98925 97161 ID=Msa1366740;Name=Msa1366740
tig0018481 mRNA 97161 98925 97161 ID=Msa1366740-mRNA-1;Parent=Msa1366740;Name=Msa1366740-mRNA-1;_AED=0.28;_eAED=0.28;_QI=74|1|1|1|1|1|2|367|272
tig0018481 exon 97161 97497 97161 ID=Msa1366740-mRNA-1:exon:15222;Parent=Msa1366740-mRNA-1
tig0018481 exon 98003 98925 98003 ID=Msa1366740-mRNA-1:exon:15223;Parent=Msa1366740-mRNA-1
tig0018481 five_prime_UTR 97161 97234 97161 ID=Msa1366740-mRNA-1:five_prime_utr;Parent=Msa1366740-mRNA-1
tig0018481 CDS 97235 97497 97235 ID=Msa1366740-mRNA-1:cds;Parent=Msa1366740-mRNA-1
tig0018481 CDS 98003 98558 98003 ID=Msa1366740-mRNA-1:cds;Parent=Msa1366740-mRNA-1
tig0018481 three_prime_UTR 98559 98925 98559 ID=Msa1366740-mRNA-1:three_prime_utr;Parent=Msa1366740-mRNA-1
Gene Sequence

>Msa1366740

ATGGGGAGACAACCTTGTTGTGACAAACTTGGTGTGAAGAAAGGTCCATGGACAGCTGAGGAAGACAAGAAACTCATCACTTTTATTCTTACCAATGGACAATGTTGTTGGCGTGCTGTGCCTAAACTTGCCGGCCTTCGGCGCTGCGGTAAGAGCTGTCGTCTTCGTTGGACTAATTATCTTCGTCCTGATTTAAAGAGAGGTCTCCTCACTGAAGCAGAGGAGCAGCTTGTTATTGATCTCCATGCCCGCCTCGGCAACAGGTGGTCGAAGATTGCTTCACGGTTACCCGGGAGAACAGACAATGAGATTAAAAATCATTGGAACACACACATCAAGAAAAAGCTCATTAAGATGGGAATTGATCCCATTACTCATGAACCTTTGAATAAACAAGCATCATCCAATGATAGTAGTACTTCATCCCCTGCAGAAAATTCGTCACAGCCTGTTAACAACCATGAAGTGAAGGAAACTGATGGGGTTGTCAACTCAGAGGAGAATTCAAGCTCATCCCCAGCTGAAAATTCTTCTGGAGAAGAATCACTTTTGCTAGATAGCATTTGCAGTGACGATTCTCTAATGAATAGTATATGGTTGGATGAAACACCATTGGTGGAAGCCCTTTGGGAAATGGACACTACACCTATAGCAGAAAATACAAAAAATGACATGAATTTTATGCCTTCTTGGGAGGATAATTGTGCTTGGCTATTTGATTGTCAAGACTTTGGTATTCATGACTTTGGATTTAATTGTTTCAATGAGATAGAGTCAAGTACACTGCAAACTATAGGGATGAAGGAAAATAAACATTAG
Protein sequence

>Msa1366740

MGRQPCCDKLGVKKGPWTAEEDKKLITFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLTEAEEQLVIDLHARLGNRWSKIASRLPGRTDNEIKNHWNTHIKKKLIKMGIDPITHEPLNKQASSNDSSTSSPAENSSQPVNNHEVKETDGVVNSEENSSSSPAENSSGEESLLLDSICSDDSLMNSIWLDETPLVEALWEMDTTPIAENTKNDMNFMPSWEDNCAWLFDCQDFGIHDFGFNCFNEIESSTLQTIGMKENKH*