Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1372940 | XP_024631543.1 | 97.243 | 399 | 10 | 1 | 1 | 398 | 2 | 400 | 0.0 | 812 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1372940 | sp|Q0WT24|STOP2_ARATH | 47.207 | 358 | 127 | 7 | 43 | 387 | 53 | 361 | 2.94e-108 | 326 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1372940 | A0A396JFA8 | 97.243 | 399 | 10 | 1 | 1 | 398 | 2 | 400 | 0.0 | 812 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1372940 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1372940 | MtrunA17_Chr2g0320341 | 97.243 | 399 | 10 | 1 | 1 | 398 | 2 | 400 | 0.0 | 812 |
| Msa1372940 | MtrunA17_Chr1g0200421 | 61.350 | 163 | 57 | 2 | 228 | 388 | 236 | 394 | 6.42e-71 | 231 |
| Msa1372940 | MtrunA17_Chr8g0382121 | 56.442 | 163 | 66 | 2 | 227 | 388 | 109 | 267 | 2.49e-64 | 208 |
| Msa1372940 | MtrunA17_Chr3g0123941 | 58.896 | 163 | 61 | 1 | 226 | 388 | 120 | 276 | 7.39e-64 | 207 |
| Msa1372940 | MtrunA17_Chr2g0326381 | 36.129 | 155 | 86 | 3 | 223 | 377 | 41 | 182 | 2.64e-26 | 109 |
| Msa1372940 | MtrunA17_Chr1g0185121 | 34.555 | 191 | 110 | 4 | 187 | 377 | 15 | 190 | 2.23e-25 | 107 |
| Msa1372940 | MtrunA17_Chr4g0029521 | 34.839 | 155 | 88 | 3 | 223 | 377 | 47 | 188 | 3.08e-25 | 107 |
| Msa1372940 | MtrunA17_Chr8g0342421 | 35.484 | 155 | 86 | 3 | 223 | 377 | 71 | 211 | 3.16e-25 | 107 |
| Msa1372940 | MtrunA17_Chr1g0181381 | 34.839 | 155 | 88 | 3 | 223 | 377 | 47 | 188 | 5.95e-25 | 106 |
| Msa1372940 | MtrunA17_Chr4g0053341 | 37.255 | 153 | 87 | 5 | 237 | 387 | 80 | 225 | 8.81e-25 | 101 |
| Msa1372940 | MtrunA17_Chr1g0198651 | 37.647 | 170 | 98 | 7 | 230 | 396 | 102 | 266 | 1.93e-24 | 102 |
| Msa1372940 | MtrunA17_Chr4g0040571 | 32.370 | 173 | 96 | 4 | 223 | 395 | 48 | 199 | 5.98e-24 | 103 |
| Msa1372940 | MtrunA17_Chr3g0141431 | 33.728 | 169 | 92 | 4 | 223 | 391 | 31 | 179 | 8.35e-24 | 102 |
| Msa1372940 | MtrunA17_Chr1g0210821 | 36.129 | 155 | 85 | 4 | 223 | 377 | 53 | 193 | 1.06e-23 | 103 |
| Msa1372940 | MtrunA17_Chr2g0330171 | 34.177 | 158 | 90 | 3 | 223 | 380 | 55 | 198 | 1.77e-23 | 101 |
| Msa1372940 | MtrunA17_Chr7g0263941 | 34.810 | 158 | 89 | 4 | 223 | 380 | 43 | 186 | 2.00e-23 | 100 |
| Msa1372940 | MtrunA17_Chr5g0422571 | 38.312 | 154 | 88 | 4 | 234 | 386 | 105 | 252 | 4.20e-23 | 98.2 |
| Msa1372940 | MtrunA17_Chr7g0268961 | 34.667 | 150 | 84 | 3 | 228 | 377 | 36 | 171 | 4.25e-23 | 100 |
| Msa1372940 | MtrunA17_Chr8g0352011 | 38.158 | 152 | 85 | 5 | 235 | 384 | 170 | 314 | 4.47e-23 | 99.0 |
| Msa1372940 | MtrunA17_Chr8g0373541 | 34.194 | 155 | 88 | 3 | 223 | 377 | 42 | 182 | 5.16e-23 | 100 |
| Msa1372940 | MtrunA17_Chr1g0162971 | 34.810 | 158 | 89 | 4 | 223 | 380 | 50 | 193 | 5.42e-23 | 100 |
| Msa1372940 | MtrunA17_Chr1g0173841 | 37.500 | 160 | 90 | 5 | 235 | 391 | 219 | 371 | 5.78e-23 | 99.4 |
| Msa1372940 | MtrunA17_Chr1g0191991 | 33.548 | 155 | 89 | 3 | 223 | 377 | 72 | 212 | 8.13e-23 | 100 |
| Msa1372940 | MtrunA17_Chr1g0151351 | 33.548 | 155 | 90 | 3 | 223 | 377 | 50 | 191 | 8.65e-23 | 99.8 |
| Msa1372940 | MtrunA17_Chr7g0258011 | 37.500 | 152 | 87 | 4 | 235 | 385 | 180 | 324 | 1.58e-22 | 97.8 |
| Msa1372940 | MtrunA17_Chr2g0321291 | 36.129 | 155 | 91 | 4 | 234 | 387 | 137 | 284 | 2.01e-22 | 96.7 |
| Msa1372940 | MtrunA17_Chr1g0163001 | 33.333 | 171 | 93 | 5 | 223 | 393 | 52 | 201 | 2.51e-22 | 99.0 |
| Msa1372940 | MtrunA17_Chr4g0026521 | 34.615 | 156 | 95 | 3 | 230 | 385 | 118 | 266 | 3.20e-22 | 95.9 |
| Msa1372940 | MtrunA17_Chr1g0199101 | 34.194 | 155 | 88 | 4 | 223 | 377 | 56 | 196 | 3.68e-22 | 98.2 |
| Msa1372940 | MtrunA17_Chr2g0328921 | 34.615 | 156 | 95 | 3 | 230 | 385 | 138 | 286 | 9.74e-22 | 94.7 |
| Msa1372940 | MtrunA17_Chr8g0375521 | 33.333 | 156 | 90 | 4 | 223 | 377 | 36 | 178 | 1.40e-20 | 92.8 |
| Msa1372940 | MtrunA17_Chr6g0479921 | 33.333 | 156 | 89 | 5 | 223 | 377 | 38 | 179 | 4.96e-20 | 91.7 |
| Msa1372940 | MtrunA17_Chr2g0324991 | 32.051 | 156 | 92 | 3 | 226 | 381 | 4 | 145 | 1.66e-18 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1372940 | AT5G22890.1 | 47.207 | 358 | 127 | 7 | 43 | 387 | 53 | 361 | 2.99e-109 | 326 |
| Msa1372940 | AT1G34370.3 | 59.639 | 166 | 67 | 0 | 223 | 388 | 14 | 179 | 1.78e-73 | 231 |
| Msa1372940 | AT1G34370.2 | 33.924 | 395 | 175 | 7 | 20 | 388 | 55 | 389 | 1.75e-72 | 235 |
| Msa1372940 | AT1G34370.1 | 33.924 | 395 | 175 | 7 | 20 | 388 | 55 | 389 | 1.75e-72 | 235 |
| Msa1372940 | AT3G45260.2 | 36.129 | 155 | 86 | 3 | 223 | 377 | 48 | 189 | 2.72e-25 | 107 |
| Msa1372940 | AT3G45260.1 | 36.129 | 155 | 86 | 3 | 223 | 377 | 48 | 189 | 2.72e-25 | 107 |
| Msa1372940 | AT5G60470.2 | 34.839 | 155 | 88 | 4 | 223 | 377 | 53 | 194 | 5.45e-25 | 106 |
| Msa1372940 | AT5G60470.3 | 34.839 | 155 | 88 | 4 | 223 | 377 | 49 | 190 | 5.98e-25 | 106 |
| Msa1372940 | AT5G03150.1 | 35.484 | 155 | 87 | 3 | 223 | 377 | 62 | 203 | 1.24e-24 | 105 |
| Msa1372940 | AT5G44160.1 | 32.948 | 173 | 95 | 4 | 223 | 395 | 46 | 197 | 1.59e-24 | 105 |
| Msa1372940 | AT5G60470.1 | 35.333 | 150 | 84 | 4 | 228 | 377 | 49 | 185 | 2.33e-24 | 104 |
| Msa1372940 | AT1G03840.1 | 32.370 | 173 | 96 | 4 | 223 | 395 | 50 | 201 | 2.50e-24 | 105 |
| Msa1372940 | AT1G55110.3 | 34.839 | 155 | 88 | 3 | 223 | 377 | 72 | 213 | 8.95e-24 | 102 |
| Msa1372940 | AT1G55110.1 | 34.839 | 155 | 88 | 3 | 223 | 377 | 72 | 213 | 8.95e-24 | 102 |
| Msa1372940 | AT1G55110.2 | 34.839 | 155 | 88 | 3 | 223 | 377 | 72 | 213 | 8.95e-24 | 102 |
| Msa1372940 | AT5G66730.1 | 35.484 | 155 | 86 | 4 | 223 | 377 | 41 | 181 | 8.98e-24 | 103 |
| Msa1372940 | AT5G44160.2 | 32.941 | 170 | 93 | 4 | 226 | 395 | 10 | 158 | 1.14e-23 | 102 |
| Msa1372940 | AT2G02080.1 | 36.774 | 155 | 84 | 4 | 223 | 377 | 63 | 203 | 1.18e-23 | 103 |
| Msa1372940 | AT2G02080.4 | 36.774 | 155 | 84 | 4 | 223 | 377 | 63 | 203 | 1.18e-23 | 103 |
| Msa1372940 | AT2G02080.5 | 36.774 | 155 | 84 | 4 | 223 | 377 | 63 | 203 | 1.18e-23 | 103 |
| Msa1372940 | AT2G02080.3 | 36.774 | 155 | 84 | 4 | 223 | 377 | 63 | 203 | 1.18e-23 | 103 |
| Msa1372940 | AT1G34790.1 | 39.490 | 157 | 86 | 5 | 237 | 391 | 138 | 287 | 1.52e-23 | 100 |
| Msa1372940 | AT1G03840.2 | 32.948 | 173 | 93 | 5 | 223 | 395 | 50 | 199 | 1.64e-23 | 102 |
| Msa1372940 | AT2G02070.2 | 36.129 | 155 | 85 | 4 | 223 | 377 | 61 | 201 | 2.01e-23 | 102 |
| Msa1372940 | AT2G02070.1 | 36.129 | 155 | 85 | 4 | 223 | 377 | 61 | 201 | 2.01e-23 | 102 |
| Msa1372940 | AT4G02670.1 | 35.484 | 155 | 87 | 3 | 223 | 377 | 62 | 203 | 3.31e-23 | 100 |
| Msa1372940 | AT4G02670.2 | 35.484 | 155 | 87 | 3 | 223 | 377 | 64 | 205 | 3.48e-23 | 100 |
| Msa1372940 | AT3G13810.6 | 33.548 | 155 | 90 | 3 | 223 | 377 | 60 | 201 | 8.10e-23 | 100 |
| Msa1372940 | AT3G13810.4 | 33.548 | 155 | 90 | 3 | 223 | 377 | 79 | 220 | 8.14e-23 | 100 |
| Msa1372940 | AT3G13810.1 | 33.548 | 155 | 90 | 3 | 223 | 377 | 79 | 220 | 8.14e-23 | 100 |
| Msa1372940 | AT3G13810.5 | 33.548 | 155 | 90 | 3 | 223 | 377 | 74 | 215 | 8.66e-23 | 100 |
| Msa1372940 | AT3G50700.1 | 34.839 | 155 | 87 | 4 | 223 | 377 | 43 | 183 | 1.47e-22 | 99.4 |
| Msa1372940 | AT3G57670.1 | 30.942 | 223 | 131 | 8 | 173 | 391 | 157 | 360 | 2.83e-22 | 97.8 |
| Msa1372940 | AT1G14580.1 | 34.194 | 155 | 88 | 4 | 223 | 377 | 62 | 202 | 5.47e-22 | 97.8 |
| Msa1372940 | AT1G14580.2 | 34.194 | 155 | 88 | 4 | 223 | 377 | 62 | 202 | 5.47e-22 | 97.8 |
| Msa1372940 | AT3G13810.2 | 33.553 | 152 | 88 | 3 | 226 | 377 | 83 | 221 | 6.14e-22 | 98.2 |
| Msa1372940 | AT3G13810.3 | 33.553 | 152 | 88 | 3 | 226 | 377 | 69 | 207 | 6.65e-22 | 97.8 |
| Msa1372940 | AT1G14580.3 | 34.194 | 155 | 88 | 4 | 223 | 377 | 76 | 216 | 7.26e-22 | 97.4 |
| Msa1372940 | AT1G08290.1 | 37.580 | 157 | 85 | 7 | 245 | 395 | 182 | 331 | 8.54e-22 | 95.9 |
| Msa1372940 | AT1G51220.1 | 39.161 | 143 | 79 | 4 | 245 | 386 | 180 | 315 | 9.42e-22 | 95.5 |
| Msa1372940 | AT3G20880.1 | 39.161 | 143 | 79 | 4 | 245 | 386 | 258 | 393 | 1.08e-21 | 96.7 |
| Msa1372940 | AT1G13290.1 | 38.158 | 152 | 88 | 4 | 235 | 385 | 92 | 238 | 1.95e-21 | 94.4 |
| Msa1372940 | AT2G01940.1 | 35.669 | 157 | 85 | 5 | 223 | 377 | 53 | 195 | 6.77e-21 | 94.4 |
| Msa1372940 | AT2G02080.6 | 37.594 | 133 | 69 | 4 | 245 | 377 | 8 | 126 | 8.89e-20 | 91.3 |
| Msa1372940 | AT2G02080.2 | 37.594 | 133 | 69 | 4 | 245 | 377 | 8 | 126 | 8.89e-20 | 91.3 |
| Msa1372940 | AT1G25250.3 | 33.333 | 156 | 91 | 4 | 223 | 377 | 42 | 185 | 1.88e-19 | 89.7 |
| Msa1372940 | AT1G68130.1 | 32.692 | 156 | 91 | 4 | 223 | 377 | 50 | 192 | 1.15e-18 | 87.8 |
| Msa1372940 | AT1G25250.1 | 33.333 | 153 | 89 | 4 | 226 | 377 | 22 | 162 | 1.17e-18 | 87.0 |
| Msa1372940 | AT2G01940.3 | 35.862 | 145 | 77 | 5 | 223 | 365 | 53 | 183 | 3.88e-18 | 86.3 |
Find 85 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTTGCATACATACATTT+TGG | 0.081024 | tig0019325:-109066 | None:intergenic |
| TCTAATATTCAATCAAATTT+TGG | 0.121082 | tig0019325:+108462 | Msa1372940:CDS |
| GACGATACATGCTTGAAATT+TGG | 0.140194 | tig0019325:+108702 | Msa1372940:CDS |
| AATTTGGGTCATCTTATAAT+TGG | 0.158814 | tig0019325:+108718 | Msa1372940:CDS |
| GAAATTCCTTCCATGGAATT+TGG | 0.159254 | tig0019325:-108168 | None:intergenic |
| TAATCTCTATTCTTAGTAAT+TGG | 0.163762 | tig0019325:-108912 | None:intergenic |
| AGACCCTCTTATACTATTAT+TGG | 0.167733 | tig0019325:-108643 | None:intergenic |
| ACTATCTCATTGTCACATTC+TGG | 0.228785 | tig0019325:-108747 | None:intergenic |
| TTGACGAGTCTTGTTGATTT+GGG | 0.269721 | tig0019325:-108287 | None:intergenic |
| TTCTAGGAAAGATAAGCTTA+TGG | 0.293207 | tig0019325:+109184 | Msa1372940:CDS |
| ACGATACATGCTTGAAATTT+GGG | 0.311648 | tig0019325:+108703 | Msa1372940:CDS |
| GAGATTGAAGAGGAGGGAAT+TGG | 0.314396 | tig0019325:-108208 | None:intergenic |
| TTTCTGTTCTTTCTGATTTG+AGG | 0.317726 | tig0019325:+109105 | Msa1372940:CDS |
| ATAATAGTAACATTAATTAT+AGG | 0.329713 | tig0019325:+108571 | Msa1372940:CDS |
| TCTAGGAAAGATAAGCTTAT+GGG | 0.346344 | tig0019325:+109185 | Msa1372940:CDS |
| GTTGACGAGTCTTGTTGATT+TGG | 0.361562 | tig0019325:-108288 | None:intergenic |
| ACAAGACTCGTCAACATCTA+TGG | 0.370241 | tig0019325:+108296 | Msa1372940:CDS |
| GAAACCAATAATAGTATAAG+AGG | 0.388033 | tig0019325:+108639 | Msa1372940:CDS |
| ATTTGGGTCATCTTATAATT+GGG | 0.388779 | tig0019325:+108719 | Msa1372940:CDS |
| TATGACAAACCATCGATAAC+CGG | 0.393038 | tig0019325:-109236 | None:intergenic |
| GTCCTCAAGAAGGGTGTAGA+TGG | 0.403741 | tig0019325:+108967 | Msa1372940:CDS |
| AGAAACATTGTGGTGATCTT+AGG | 0.406285 | tig0019325:+109135 | Msa1372940:CDS |
| AATCAAGTGCAAACTCTTGT+TGG | 0.406380 | tig0019325:+108252 | Msa1372940:CDS |
| AAGCTTATCTTTCCTAGAAA+AGG | 0.414705 | tig0019325:-109180 | None:intergenic |
| ACACATTATTGTCAAGTTTG+TGG | 0.417742 | tig0019325:+108804 | Msa1372940:CDS |
| ATTGAAGAGGAGGGAATTGG+AGG | 0.418962 | tig0019325:-108205 | None:intergenic |
| TGACAATGAGATAGTTGAAT+TGG | 0.426435 | tig0019325:+108755 | Msa1372940:CDS |
| GGACATGTTGGTTTGTTTGT+GGG | 0.428197 | tig0019325:+109206 | Msa1372940:CDS |
| TGAACTTGAAATTCCTTCCA+TGG | 0.440143 | tig0019325:-108175 | None:intergenic |
| GGGACATGTTGGTTTGTTTG+TGG | 0.441560 | tig0019325:+109205 | Msa1372940:CDS |
| TACAATGATTTCTTGTATTG+TGG | 0.444279 | tig0019325:-108337 | None:intergenic |
| TAATAATGAGTCAGAACCAT+TGG | 0.457675 | tig0019325:+108530 | Msa1372940:CDS |
| CTATCTCATTGTCACATTCT+GGG | 0.458096 | tig0019325:-108746 | None:intergenic |
| TATTGTCAAGTTTGTGGCAA+AGG | 0.467134 | tig0019325:+108810 | Msa1372940:CDS |
| ACGATGATATTGACAATCAA+AGG | 0.472290 | tig0019325:+108598 | Msa1372940:CDS |
| GAGTAGAGAGATTGAAGAGG+AGG | 0.472764 | tig0019325:-108215 | None:intergenic |
| TCAGAACCATTGGATTGGTT+TGG | 0.473677 | tig0019325:+108540 | Msa1372940:CDS |
| AGTAGAGAGATTGAAGAGGA+GGG | 0.474634 | tig0019325:-108214 | None:intergenic |
| ATTGTCAAGTTTGTGGCAAA+GGG | 0.476447 | tig0019325:+108811 | Msa1372940:CDS |
| GACACAAACATTGATCTTAG+AGG | 0.484429 | tig0019325:+108492 | Msa1372940:CDS |
| GGGTTTGAAATTGAAAATCA+AGG | 0.486940 | tig0019325:+108102 | Msa1372940:CDS |
| TAATAGAAGTAGTACCTTGA+GGG | 0.496518 | tig0019325:-108407 | None:intergenic |
| AGGATGCATATGAGAGCTCA+TGG | 0.501614 | tig0019325:+108855 | Msa1372940:CDS |
| ATGTCAAGGACAACACCTCT+AGG | 0.501625 | tig0019325:+108081 | Msa1372940:CDS |
| GATAAGCTTATGGGACATGT+TGG | 0.504366 | tig0019325:+109194 | Msa1372940:CDS |
| TGACCATAGGAAACATTTGT+AGG | 0.507771 | tig0019325:-108125 | None:intergenic |
| GATGCCATTGCCAAATTCCA+TGG | 0.512772 | tig0019325:+108158 | Msa1372940:CDS |
| TGACTTCAAAGGTTGAAACT+TGG | 0.516503 | tig0019325:-109003 | None:intergenic |
| ATGAGTCAGAACCATTGGAT+TGG | 0.516915 | tig0019325:+108535 | Msa1372940:CDS |
| AGGCCTACAAATGTTTCCTA+TGG | 0.518719 | tig0019325:+108122 | Msa1372940:CDS |
| CCTTCCATGGAATTTGGCAA+TGG | 0.522098 | tig0019325:-108162 | None:intergenic |
| GCACAAATCAATGACTTCAA+AGG | 0.522700 | tig0019325:-109014 | None:intergenic |
| AAATATTCATGTCCTCAAGA+AGG | 0.523706 | tig0019325:+108957 | Msa1372940:CDS |
| TTTGTTTGTGGGACACCACC+CGG | 0.527125 | tig0019325:+109217 | Msa1372940:CDS |
| TTGACAATAATGTGTGTACT+TGG | 0.534066 | tig0019325:-108796 | None:intergenic |
| TTGAAGAGGAGGGAATTGGA+GGG | 0.534838 | tig0019325:-108204 | None:intergenic |
| CGATGATATTGACAATCAAA+GGG | 0.539499 | tig0019325:+108599 | Msa1372940:CDS |
| GGGTCATCTTATAATTGGGT+CGG | 0.542248 | tig0019325:+108723 | Msa1372940:CDS |
| TCAAGAGGGATGCAAATTTG+AGG | 0.543405 | tig0019325:+108835 | Msa1372940:CDS |
| TGAGAGTAGAGAGATTGAAG+AGG | 0.548870 | tig0019325:-108218 | None:intergenic |
| AATATTCATGTCCTCAAGAA+GGG | 0.556447 | tig0019325:+108958 | Msa1372940:CDS |
| TTGTATTGTGGAGTTCATTG+TGG | 0.558473 | tig0019325:-108325 | None:intergenic |
| GGACACCACCCGGTTATCGA+TGG | 0.564511 | tig0019325:+109227 | Msa1372940:CDS |
| ATGACAAACCATCGATAACC+GGG | 0.571281 | tig0019325:-109235 | None:intergenic |
| TTCCATCTACACCCTTCTTG+AGG | 0.572019 | tig0019325:-108969 | None:intergenic |
| GGAAACTAAGAGCAATCTGT+TGG | 0.579939 | tig0019325:-108386 | None:intergenic |
| CCATTGCCAAATTCCATGGA+AGG | 0.581643 | tig0019325:+108162 | Msa1372940:CDS |
| CTTTCACCAAACCAATCCAA+TGG | 0.587496 | tig0019325:-108546 | None:intergenic |
| TTTGTGGCAAAGGGTTCAAG+AGG | 0.595190 | tig0019325:+108820 | Msa1372940:CDS |
| ACAAATGTTTCCTATGGTCA+CGG | 0.597671 | tig0019325:+108128 | Msa1372940:CDS |
| CTTAGGTGGCAGTGTTCATG+TGG | 0.605201 | tig0019325:+109152 | Msa1372940:CDS |
| ATCAAATCTTCCGTGACCAT+AGG | 0.609192 | tig0019325:-108138 | None:intergenic |
| TGTCAAGGACAACACCTCTA+GGG | 0.610871 | tig0019325:+108082 | Msa1372940:CDS |
| AACATTGTGGTGATCTTAGG+TGG | 0.610982 | tig0019325:+109138 | Msa1372940:CDS |
| TGACGAGTCTTGTTGATTTG+GGG | 0.614111 | tig0019325:-108286 | None:intergenic |
| ATTGCTCTTAGTTTCCCTCA+AGG | 0.618106 | tig0019325:+108393 | Msa1372940:CDS |
| TTAATAGAAGTAGTACCTTG+AGG | 0.620130 | tig0019325:-108408 | None:intergenic |
| AAACCAATAATAGTATAAGA+GGG | 0.620427 | tig0019325:+108640 | Msa1372940:CDS |
| GGATGCATATGAGAGCTCAT+GGG | 0.624368 | tig0019325:+108856 | Msa1372940:CDS |
| GCAAGTGAACATCATTGATG+TGG | 0.636466 | tig0019325:-108364 | None:intergenic |
| CCAAAATGTATGTATGCAAG+AGG | 0.650780 | tig0019325:+109066 | Msa1372940:CDS |
| GATGCATATGAGAGCTCATG+GGG | 0.685805 | tig0019325:+108857 | Msa1372940:CDS |
| TTGTGGCAAAGGGTTCAAGA+GGG | 0.697728 | tig0019325:+108821 | Msa1372940:CDS |
| AGGACACATGAGAAACATTG+TGG | 0.713628 | tig0019325:+109125 | Msa1372940:CDS |
| ACAAACCATCGATAACCGGG+TGG | 0.755555 | tig0019325:-109232 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAGTAACATTAATTAT+AGG | + | tig0019325:108571-108590 | Msa1372940:CDS | 10.0% |
| !! | ATAATAGTAACATTAATTAT+AGG | + | tig0019325:108571-108590 | Msa1372940:CDS | 10.0% |
| !!! | TCTAATATTCAATCAAATTT+TGG | + | tig0019325:108462-108481 | Msa1372940:CDS | 15.0% |
| !!! | TCTAATATTCAATCAAATTT+TGG | + | tig0019325:108462-108481 | Msa1372940:CDS | 15.0% |
| !! | AAACCAATAATAGTATAAGA+GGG | + | tig0019325:108640-108659 | Msa1372940:CDS | 20.0% |
| !! | TAATCTCTATTCTTAGTAAT+TGG | - | tig0019325:108915-108934 | None:intergenic | 20.0% |
| !! | AAACCAATAATAGTATAAGA+GGG | + | tig0019325:108640-108659 | Msa1372940:CDS | 20.0% |
| !! | TAATCTCTATTCTTAGTAAT+TGG | - | tig0019325:108915-108934 | None:intergenic | 20.0% |
| ! | TACAATGATTTCTTGTATTG+TGG | - | tig0019325:108340-108359 | None:intergenic | 25.0% |
| !!! | ATTGTTGCTTTTGAAATTCT+TGG | - | tig0019325:108443-108462 | None:intergenic | 25.0% |
| ! | GAAACCAATAATAGTATAAG+AGG | + | tig0019325:108639-108658 | Msa1372940:CDS | 25.0% |
| ! | AATTTGGGTCATCTTATAAT+TGG | + | tig0019325:108718-108737 | Msa1372940:CDS | 25.0% |
| ! | ATTTGGGTCATCTTATAATT+GGG | + | tig0019325:108719-108738 | Msa1372940:CDS | 25.0% |
| ! | TACAATGATTTCTTGTATTG+TGG | - | tig0019325:108340-108359 | None:intergenic | 25.0% |
| !!! | ATTGTTGCTTTTGAAATTCT+TGG | - | tig0019325:108443-108462 | None:intergenic | 25.0% |
| ! | GAAACCAATAATAGTATAAG+AGG | + | tig0019325:108639-108658 | Msa1372940:CDS | 25.0% |
| ! | AATTTGGGTCATCTTATAAT+TGG | + | tig0019325:108718-108737 | Msa1372940:CDS | 25.0% |
| ! | ATTTGGGTCATCTTATAATT+GGG | + | tig0019325:108719-108738 | Msa1372940:CDS | 25.0% |
| ! | TTTTCAATTTCAAACCCTAG+AGG | - | tig0019325:108099-108118 | None:intergenic | 30.0% |
| ! | GGGTTTGAAATTGAAAATCA+AGG | + | tig0019325:108102-108121 | Msa1372940:CDS | 30.0% |
| TAATAGAAGTAGTACCTTGA+GGG | - | tig0019325:108410-108429 | None:intergenic | 30.0% | |
| TTAATAGAAGTAGTACCTTG+AGG | - | tig0019325:108411-108430 | None:intergenic | 30.0% | |
| TAATAATGAGTCAGAACCAT+TGG | + | tig0019325:108530-108549 | Msa1372940:CDS | 30.0% | |
| ACGATGATATTGACAATCAA+AGG | + | tig0019325:108598-108617 | Msa1372940:CDS | 30.0% | |
| CGATGATATTGACAATCAAA+GGG | + | tig0019325:108599-108618 | Msa1372940:CDS | 30.0% | |
| AGACCCTCTTATACTATTAT+TGG | - | tig0019325:108646-108665 | None:intergenic | 30.0% | |
| ACGATACATGCTTGAAATTT+GGG | + | tig0019325:108703-108722 | Msa1372940:CDS | 30.0% | |
| TGACAATGAGATAGTTGAAT+TGG | + | tig0019325:108755-108774 | Msa1372940:CDS | 30.0% | |
| TTGACAATAATGTGTGTACT+TGG | - | tig0019325:108799-108818 | None:intergenic | 30.0% | |
| ACACATTATTGTCAAGTTTG+TGG | + | tig0019325:108804-108823 | Msa1372940:CDS | 30.0% | |
| AAATATTCATGTCCTCAAGA+AGG | + | tig0019325:108957-108976 | Msa1372940:CDS | 30.0% | |
| AATATTCATGTCCTCAAGAA+GGG | + | tig0019325:108958-108977 | Msa1372940:CDS | 30.0% | |
| !!! | ATACATACATTTTGGGACAA+TGG | - | tig0019325:109061-109080 | None:intergenic | 30.0% |
| ! | CTCTTGCATACATACATTTT+GGG | - | tig0019325:109068-109087 | None:intergenic | 30.0% |
| ! | TTTCTGTTCTTTCTGATTTG+AGG | + | tig0019325:109105-109124 | Msa1372940:CDS | 30.0% |
| AAGCTTATCTTTCCTAGAAA+AGG | - | tig0019325:109183-109202 | None:intergenic | 30.0% | |
| ! | TTCTAGGAAAGATAAGCTTA+TGG | + | tig0019325:109184-109203 | Msa1372940:CDS | 30.0% |
| TCTAGGAAAGATAAGCTTAT+GGG | + | tig0019325:109185-109204 | Msa1372940:CDS | 30.0% | |
| ! | TTTTCAATTTCAAACCCTAG+AGG | - | tig0019325:108099-108118 | None:intergenic | 30.0% |
| ! | GGGTTTGAAATTGAAAATCA+AGG | + | tig0019325:108102-108121 | Msa1372940:CDS | 30.0% |
| TAATAGAAGTAGTACCTTGA+GGG | - | tig0019325:108410-108429 | None:intergenic | 30.0% | |
| TTAATAGAAGTAGTACCTTG+AGG | - | tig0019325:108411-108430 | None:intergenic | 30.0% | |
| TAATAATGAGTCAGAACCAT+TGG | + | tig0019325:108530-108549 | Msa1372940:CDS | 30.0% | |
| ACGATGATATTGACAATCAA+AGG | + | tig0019325:108598-108617 | Msa1372940:CDS | 30.0% | |
| CGATGATATTGACAATCAAA+GGG | + | tig0019325:108599-108618 | Msa1372940:CDS | 30.0% | |
| AGACCCTCTTATACTATTAT+TGG | - | tig0019325:108646-108665 | None:intergenic | 30.0% | |
| ACGATACATGCTTGAAATTT+GGG | + | tig0019325:108703-108722 | Msa1372940:CDS | 30.0% | |
| TGACAATGAGATAGTTGAAT+TGG | + | tig0019325:108755-108774 | Msa1372940:CDS | 30.0% | |
| TTGACAATAATGTGTGTACT+TGG | - | tig0019325:108799-108818 | None:intergenic | 30.0% | |
| ACACATTATTGTCAAGTTTG+TGG | + | tig0019325:108804-108823 | Msa1372940:CDS | 30.0% | |
| AAATATTCATGTCCTCAAGA+AGG | + | tig0019325:108957-108976 | Msa1372940:CDS | 30.0% | |
| AATATTCATGTCCTCAAGAA+GGG | + | tig0019325:108958-108977 | Msa1372940:CDS | 30.0% | |
| !!! | ATACATACATTTTGGGACAA+TGG | - | tig0019325:109061-109080 | None:intergenic | 30.0% |
| ! | CTCTTGCATACATACATTTT+GGG | - | tig0019325:109068-109087 | None:intergenic | 30.0% |
| ! | TTTCTGTTCTTTCTGATTTG+AGG | + | tig0019325:109105-109124 | Msa1372940:CDS | 30.0% |
| AAGCTTATCTTTCCTAGAAA+AGG | - | tig0019325:109183-109202 | None:intergenic | 30.0% | |
| ! | TTCTAGGAAAGATAAGCTTA+TGG | + | tig0019325:109184-109203 | Msa1372940:CDS | 30.0% |
| TCTAGGAAAGATAAGCTTAT+GGG | + | tig0019325:109185-109204 | Msa1372940:CDS | 30.0% | |
| TGACCATAGGAAACATTTGT+AGG | - | tig0019325:108128-108147 | None:intergenic | 35.0% | |
| ACAAATGTTTCCTATGGTCA+CGG | + | tig0019325:108128-108147 | Msa1372940:CDS | 35.0% | |
| GAAATTCCTTCCATGGAATT+TGG | - | tig0019325:108171-108190 | None:intergenic | 35.0% | |
| TGAACTTGAAATTCCTTCCA+TGG | - | tig0019325:108178-108197 | None:intergenic | 35.0% | |
| AATCAAGTGCAAACTCTTGT+TGG | + | tig0019325:108252-108271 | Msa1372940:CDS | 35.0% | |
| !! | TTGACGAGTCTTGTTGATTT+GGG | - | tig0019325:108290-108309 | None:intergenic | 35.0% |
| TTGTATTGTGGAGTTCATTG+TGG | - | tig0019325:108328-108347 | None:intergenic | 35.0% | |
| GACACAAACATTGATCTTAG+AGG | + | tig0019325:108492-108511 | Msa1372940:CDS | 35.0% | |
| GACGATACATGCTTGAAATT+TGG | + | tig0019325:108702-108721 | Msa1372940:CDS | 35.0% | |
| CTATCTCATTGTCACATTCT+GGG | - | tig0019325:108749-108768 | None:intergenic | 35.0% | |
| ACTATCTCATTGTCACATTC+TGG | - | tig0019325:108750-108769 | None:intergenic | 35.0% | |
| TATTGTCAAGTTTGTGGCAA+AGG | + | tig0019325:108810-108829 | Msa1372940:CDS | 35.0% | |
| ATTGTCAAGTTTGTGGCAAA+GGG | + | tig0019325:108811-108830 | Msa1372940:CDS | 35.0% | |
| ! | GTTGAAACTTGGCATGTTTT+TGG | - | tig0019325:108995-109014 | None:intergenic | 35.0% |
| TGACTTCAAAGGTTGAAACT+TGG | - | tig0019325:109006-109025 | None:intergenic | 35.0% | |
| GCACAAATCAATGACTTCAA+AGG | - | tig0019325:109017-109036 | None:intergenic | 35.0% | |
| ! | CCTCTTGCATACATACATTT+TGG | - | tig0019325:109069-109088 | None:intergenic | 35.0% |
| CCAAAATGTATGTATGCAAG+AGG | + | tig0019325:109066-109085 | Msa1372940:CDS | 35.0% | |
| AGAAACATTGTGGTGATCTT+AGG | + | tig0019325:109135-109154 | Msa1372940:CDS | 35.0% | |
| TATGACAAACCATCGATAAC+CGG | - | tig0019325:109239-109258 | None:intergenic | 35.0% | |
| TGACCATAGGAAACATTTGT+AGG | - | tig0019325:108128-108147 | None:intergenic | 35.0% | |
| ACAAATGTTTCCTATGGTCA+CGG | + | tig0019325:108128-108147 | Msa1372940:CDS | 35.0% | |
| GAAATTCCTTCCATGGAATT+TGG | - | tig0019325:108171-108190 | None:intergenic | 35.0% | |
| TGAACTTGAAATTCCTTCCA+TGG | - | tig0019325:108178-108197 | None:intergenic | 35.0% | |
| AATCAAGTGCAAACTCTTGT+TGG | + | tig0019325:108252-108271 | Msa1372940:CDS | 35.0% | |
| !! | TTGACGAGTCTTGTTGATTT+GGG | - | tig0019325:108290-108309 | None:intergenic | 35.0% |
| TTGTATTGTGGAGTTCATTG+TGG | - | tig0019325:108328-108347 | None:intergenic | 35.0% | |
| GACACAAACATTGATCTTAG+AGG | + | tig0019325:108492-108511 | Msa1372940:CDS | 35.0% | |
| GACGATACATGCTTGAAATT+TGG | + | tig0019325:108702-108721 | Msa1372940:CDS | 35.0% | |
| CTATCTCATTGTCACATTCT+GGG | - | tig0019325:108749-108768 | None:intergenic | 35.0% | |
| ACTATCTCATTGTCACATTC+TGG | - | tig0019325:108750-108769 | None:intergenic | 35.0% | |
| TATTGTCAAGTTTGTGGCAA+AGG | + | tig0019325:108810-108829 | Msa1372940:CDS | 35.0% | |
| ATTGTCAAGTTTGTGGCAAA+GGG | + | tig0019325:108811-108830 | Msa1372940:CDS | 35.0% | |
| ! | GTTGAAACTTGGCATGTTTT+TGG | - | tig0019325:108995-109014 | None:intergenic | 35.0% |
| TGACTTCAAAGGTTGAAACT+TGG | - | tig0019325:109006-109025 | None:intergenic | 35.0% | |
| GCACAAATCAATGACTTCAA+AGG | - | tig0019325:109017-109036 | None:intergenic | 35.0% | |
| ! | CCTCTTGCATACATACATTT+TGG | - | tig0019325:109069-109088 | None:intergenic | 35.0% |
| CCAAAATGTATGTATGCAAG+AGG | + | tig0019325:109066-109085 | Msa1372940:CDS | 35.0% | |
| AGAAACATTGTGGTGATCTT+AGG | + | tig0019325:109135-109154 | Msa1372940:CDS | 35.0% | |
| TATGACAAACCATCGATAAC+CGG | - | tig0019325:109239-109258 | None:intergenic | 35.0% | |
| AGGCCTACAAATGTTTCCTA+TGG | + | tig0019325:108122-108141 | Msa1372940:CDS | 40.0% | |
| ATCAAATCTTCCGTGACCAT+AGG | - | tig0019325:108141-108160 | None:intergenic | 40.0% | |
| AGTAGAGAGATTGAAGAGGA+GGG | - | tig0019325:108217-108236 | None:intergenic | 40.0% | |
| TGAGAGTAGAGAGATTGAAG+AGG | - | tig0019325:108221-108240 | None:intergenic | 40.0% | |
| !! | TGACGAGTCTTGTTGATTTG+GGG | - | tig0019325:108289-108308 | None:intergenic | 40.0% |
| !! | GTTGACGAGTCTTGTTGATT+TGG | - | tig0019325:108291-108310 | None:intergenic | 40.0% |
| ACAAGACTCGTCAACATCTA+TGG | + | tig0019325:108296-108315 | Msa1372940:CDS | 40.0% | |
| GCAAGTGAACATCATTGATG+TGG | - | tig0019325:108367-108386 | None:intergenic | 40.0% | |
| GGAAACTAAGAGCAATCTGT+TGG | - | tig0019325:108389-108408 | None:intergenic | 40.0% | |
| ATTGCTCTTAGTTTCCCTCA+AGG | + | tig0019325:108393-108412 | Msa1372940:CDS | 40.0% | |
| ATGAGTCAGAACCATTGGAT+TGG | + | tig0019325:108535-108554 | Msa1372940:CDS | 40.0% | |
| !! | TCAGAACCATTGGATTGGTT+TGG | + | tig0019325:108540-108559 | Msa1372940:CDS | 40.0% |
| CTTTCACCAAACCAATCCAA+TGG | - | tig0019325:108549-108568 | None:intergenic | 40.0% | |
| GGGTCATCTTATAATTGGGT+CGG | + | tig0019325:108723-108742 | Msa1372940:CDS | 40.0% | |
| TCAAGAGGGATGCAAATTTG+AGG | + | tig0019325:108835-108854 | Msa1372940:CDS | 40.0% | |
| AGGACACATGAGAAACATTG+TGG | + | tig0019325:109125-109144 | Msa1372940:CDS | 40.0% | |
| AACATTGTGGTGATCTTAGG+TGG | + | tig0019325:109138-109157 | Msa1372940:CDS | 40.0% | |
| GATAAGCTTATGGGACATGT+TGG | + | tig0019325:109194-109213 | Msa1372940:CDS | 40.0% | |
| !! | GGACATGTTGGTTTGTTTGT+GGG | + | tig0019325:109206-109225 | Msa1372940:CDS | 40.0% |
| ATGACAAACCATCGATAACC+GGG | - | tig0019325:109238-109257 | None:intergenic | 40.0% | |
| AGGCCTACAAATGTTTCCTA+TGG | + | tig0019325:108122-108141 | Msa1372940:CDS | 40.0% | |
| ATCAAATCTTCCGTGACCAT+AGG | - | tig0019325:108141-108160 | None:intergenic | 40.0% | |
| AGTAGAGAGATTGAAGAGGA+GGG | - | tig0019325:108217-108236 | None:intergenic | 40.0% | |
| TGAGAGTAGAGAGATTGAAG+AGG | - | tig0019325:108221-108240 | None:intergenic | 40.0% | |
| !! | TGACGAGTCTTGTTGATTTG+GGG | - | tig0019325:108289-108308 | None:intergenic | 40.0% |
| !! | GTTGACGAGTCTTGTTGATT+TGG | - | tig0019325:108291-108310 | None:intergenic | 40.0% |
| ACAAGACTCGTCAACATCTA+TGG | + | tig0019325:108296-108315 | Msa1372940:CDS | 40.0% | |
| GCAAGTGAACATCATTGATG+TGG | - | tig0019325:108367-108386 | None:intergenic | 40.0% | |
| GGAAACTAAGAGCAATCTGT+TGG | - | tig0019325:108389-108408 | None:intergenic | 40.0% | |
| ATTGCTCTTAGTTTCCCTCA+AGG | + | tig0019325:108393-108412 | Msa1372940:CDS | 40.0% | |
| ATGAGTCAGAACCATTGGAT+TGG | + | tig0019325:108535-108554 | Msa1372940:CDS | 40.0% | |
| !! | TCAGAACCATTGGATTGGTT+TGG | + | tig0019325:108540-108559 | Msa1372940:CDS | 40.0% |
| CTTTCACCAAACCAATCCAA+TGG | - | tig0019325:108549-108568 | None:intergenic | 40.0% | |
| GGGTCATCTTATAATTGGGT+CGG | + | tig0019325:108723-108742 | Msa1372940:CDS | 40.0% | |
| TCAAGAGGGATGCAAATTTG+AGG | + | tig0019325:108835-108854 | Msa1372940:CDS | 40.0% | |
| AGGACACATGAGAAACATTG+TGG | + | tig0019325:109125-109144 | Msa1372940:CDS | 40.0% | |
| AACATTGTGGTGATCTTAGG+TGG | + | tig0019325:109138-109157 | Msa1372940:CDS | 40.0% | |
| GATAAGCTTATGGGACATGT+TGG | + | tig0019325:109194-109213 | Msa1372940:CDS | 40.0% | |
| !! | GGACATGTTGGTTTGTTTGT+GGG | + | tig0019325:109206-109225 | Msa1372940:CDS | 40.0% |
| ATGACAAACCATCGATAACC+GGG | - | tig0019325:109238-109257 | None:intergenic | 40.0% | |
| ATGTCAAGGACAACACCTCT+AGG | + | tig0019325:108081-108100 | Msa1372940:CDS | 45.0% | |
| TGTCAAGGACAACACCTCTA+GGG | + | tig0019325:108082-108101 | Msa1372940:CDS | 45.0% | |
| GATGCCATTGCCAAATTCCA+TGG | + | tig0019325:108158-108177 | Msa1372940:CDS | 45.0% | |
| CCTTCCATGGAATTTGGCAA+TGG | - | tig0019325:108165-108184 | None:intergenic | 45.0% | |
| CCATTGCCAAATTCCATGGA+AGG | + | tig0019325:108162-108181 | Msa1372940:CDS | 45.0% | |
| TTGAAGAGGAGGGAATTGGA+GGG | - | tig0019325:108207-108226 | None:intergenic | 45.0% | |
| ATTGAAGAGGAGGGAATTGG+AGG | - | tig0019325:108208-108227 | None:intergenic | 45.0% | |
| GAGATTGAAGAGGAGGGAAT+TGG | - | tig0019325:108211-108230 | None:intergenic | 45.0% | |
| GAGTAGAGAGATTGAAGAGG+AGG | - | tig0019325:108218-108237 | None:intergenic | 45.0% | |
| TTTGTGGCAAAGGGTTCAAG+AGG | + | tig0019325:108820-108839 | Msa1372940:CDS | 45.0% | |
| TTGTGGCAAAGGGTTCAAGA+GGG | + | tig0019325:108821-108840 | Msa1372940:CDS | 45.0% | |
| AGGATGCATATGAGAGCTCA+TGG | + | tig0019325:108855-108874 | Msa1372940:CDS | 45.0% | |
| GGATGCATATGAGAGCTCAT+GGG | + | tig0019325:108856-108875 | Msa1372940:CDS | 45.0% | |
| GATGCATATGAGAGCTCATG+GGG | + | tig0019325:108857-108876 | Msa1372940:CDS | 45.0% | |
| TTCCATCTACACCCTTCTTG+AGG | - | tig0019325:108972-108991 | None:intergenic | 45.0% | |
| ! | CATGTGGCACTACCTTTTCT+AGG | + | tig0019325:109168-109187 | Msa1372940:CDS | 45.0% |
| !! | GGGACATGTTGGTTTGTTTG+TGG | + | tig0019325:109205-109224 | Msa1372940:CDS | 45.0% |
| ATGTCAAGGACAACACCTCT+AGG | + | tig0019325:108081-108100 | Msa1372940:CDS | 45.0% | |
| TGTCAAGGACAACACCTCTA+GGG | + | tig0019325:108082-108101 | Msa1372940:CDS | 45.0% | |
| GATGCCATTGCCAAATTCCA+TGG | + | tig0019325:108158-108177 | Msa1372940:CDS | 45.0% | |
| CCTTCCATGGAATTTGGCAA+TGG | - | tig0019325:108165-108184 | None:intergenic | 45.0% | |
| CCATTGCCAAATTCCATGGA+AGG | + | tig0019325:108162-108181 | Msa1372940:CDS | 45.0% | |
| TTGAAGAGGAGGGAATTGGA+GGG | - | tig0019325:108207-108226 | None:intergenic | 45.0% | |
| ATTGAAGAGGAGGGAATTGG+AGG | - | tig0019325:108208-108227 | None:intergenic | 45.0% | |
| GAGATTGAAGAGGAGGGAAT+TGG | - | tig0019325:108211-108230 | None:intergenic | 45.0% | |
| GAGTAGAGAGATTGAAGAGG+AGG | - | tig0019325:108218-108237 | None:intergenic | 45.0% | |
| TTTGTGGCAAAGGGTTCAAG+AGG | + | tig0019325:108820-108839 | Msa1372940:CDS | 45.0% | |
| TTGTGGCAAAGGGTTCAAGA+GGG | + | tig0019325:108821-108840 | Msa1372940:CDS | 45.0% | |
| AGGATGCATATGAGAGCTCA+TGG | + | tig0019325:108855-108874 | Msa1372940:CDS | 45.0% | |
| GGATGCATATGAGAGCTCAT+GGG | + | tig0019325:108856-108875 | Msa1372940:CDS | 45.0% | |
| GATGCATATGAGAGCTCATG+GGG | + | tig0019325:108857-108876 | Msa1372940:CDS | 45.0% | |
| TTCCATCTACACCCTTCTTG+AGG | - | tig0019325:108972-108991 | None:intergenic | 45.0% | |
| ! | CATGTGGCACTACCTTTTCT+AGG | + | tig0019325:109168-109187 | Msa1372940:CDS | 45.0% |
| !! | GGGACATGTTGGTTTGTTTG+TGG | + | tig0019325:109205-109224 | Msa1372940:CDS | 45.0% |
| ! | GTCCTCAAGAAGGGTGTAGA+TGG | + | tig0019325:108967-108986 | Msa1372940:CDS | 50.0% |
| CTTAGGTGGCAGTGTTCATG+TGG | + | tig0019325:109152-109171 | Msa1372940:CDS | 50.0% | |
| TTTGTTTGTGGGACACCACC+CGG | + | tig0019325:109217-109236 | Msa1372940:CDS | 50.0% | |
| ACAAACCATCGATAACCGGG+TGG | - | tig0019325:109235-109254 | None:intergenic | 50.0% | |
| ! | GTCCTCAAGAAGGGTGTAGA+TGG | + | tig0019325:108967-108986 | Msa1372940:CDS | 50.0% |
| CTTAGGTGGCAGTGTTCATG+TGG | + | tig0019325:109152-109171 | Msa1372940:CDS | 50.0% | |
| TTTGTTTGTGGGACACCACC+CGG | + | tig0019325:109217-109236 | Msa1372940:CDS | 50.0% | |
| ACAAACCATCGATAACCGGG+TGG | - | tig0019325:109235-109254 | None:intergenic | 50.0% | |
| GGACACCACCCGGTTATCGA+TGG | + | tig0019325:109227-109246 | Msa1372940:CDS | 60.0% | |
| GGACACCACCCGGTTATCGA+TGG | + | tig0019325:109227-109246 | Msa1372940:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019325 | gene | 108081 | 109277 | 108081 | ID=Msa1372940;Name=Msa1372940 |
| tig0019325 | mRNA | 108081 | 109277 | 108081 | ID=Msa1372940-mRNA-1;Parent=Msa1372940;Name=Msa1372940-mRNA-1;_AED=0.25;_eAED=0.26;_QI=0|-1|0|1|-1|1|1|0|398 |
| tig0019325 | exon | 108081 | 109277 | 108081 | ID=Msa1372940-mRNA-1:exon:2979;Parent=Msa1372940-mRNA-1 |
| tig0019325 | CDS | 108081 | 109277 | 108081 | ID=Msa1372940-mRNA-1:cds;Parent=Msa1372940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
