Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385700 | XP_039683216.1 | 72.821 | 390 | 106 | 0 | 1 | 390 | 78 | 467 | 0.0 | 626 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385700 | sp|Q9SZL8|FRS5_ARATH | 33.838 | 396 | 253 | 5 | 1 | 389 | 77 | 470 | 1.21e-70 | 239 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385700 | A0A396J342 | 72.564 | 390 | 107 | 0 | 1 | 390 | 79 | 468 | 0.0 | 623 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1385700 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385700 | MtrunA17_Chr2g0287651 | 72.564 | 390 | 107 | 0 | 1 | 390 | 79 | 468 | 0.0 | 623 |
| Msa1385700 | MtrunA17_Chr1g0203051 | 43.041 | 388 | 219 | 1 | 3 | 390 | 85 | 470 | 7.19e-117 | 353 |
| Msa1385700 | MtrunA17_Chr5g0448761 | 34.085 | 399 | 252 | 5 | 1 | 389 | 64 | 461 | 1.64e-70 | 236 |
| Msa1385700 | MtrunA17_Chr2g0324011 | 33.501 | 397 | 254 | 4 | 1 | 391 | 14 | 406 | 4.70e-70 | 231 |
| Msa1385700 | MtrunA17_Chr3g0082121 | 34.336 | 399 | 239 | 7 | 1 | 390 | 47 | 431 | 1.60e-68 | 229 |
| Msa1385700 | MtrunA17_Chr8g0363841 | 32.821 | 390 | 252 | 4 | 5 | 388 | 25 | 410 | 2.89e-67 | 225 |
| Msa1385700 | MtrunA17_Chr1g0202341 | 32.242 | 397 | 255 | 8 | 1 | 389 | 55 | 445 | 6.57e-66 | 222 |
| Msa1385700 | MtrunA17_Chr5g0441581 | 29.925 | 401 | 261 | 5 | 1 | 396 | 36 | 421 | 2.84e-60 | 207 |
| Msa1385700 | MtrunA17_Chr2g0296781 | 30.711 | 394 | 262 | 5 | 1 | 390 | 1 | 387 | 5.98e-60 | 206 |
| Msa1385700 | MtrunA17_Chr6g0458391 | 31.139 | 395 | 239 | 8 | 1 | 386 | 229 | 599 | 9.09e-59 | 204 |
| Msa1385700 | MtrunA17_Chr6g0458391 | 34.286 | 140 | 78 | 6 | 1 | 131 | 95 | 229 | 2.10e-14 | 75.1 |
| Msa1385700 | MtrunA17_Chr1g0207551 | 30.127 | 395 | 264 | 5 | 1 | 389 | 38 | 426 | 1.85e-58 | 203 |
| Msa1385700 | MtrunA17_Chr1g0203721 | 30.711 | 394 | 260 | 6 | 3 | 387 | 69 | 458 | 3.63e-58 | 203 |
| Msa1385700 | MtrunA17_Chr3g0080351 | 30.542 | 406 | 240 | 9 | 1 | 389 | 80 | 460 | 2.57e-57 | 201 |
| Msa1385700 | MtrunA17_Chr1g0198761 | 30.100 | 402 | 264 | 7 | 3 | 389 | 53 | 452 | 7.13e-57 | 198 |
| Msa1385700 | MtrunA17_Chr5g0431001 | 30.597 | 402 | 262 | 8 | 3 | 389 | 67 | 466 | 8.52e-57 | 194 |
| Msa1385700 | MtrunA17_Chr1g0164591 | 34.304 | 309 | 189 | 4 | 83 | 386 | 8 | 307 | 9.55e-57 | 189 |
| Msa1385700 | MtrunA17_Chr2g0276841 | 29.854 | 412 | 247 | 8 | 3 | 389 | 76 | 470 | 3.16e-53 | 187 |
| Msa1385700 | MtrunA17_Chr2g0329031 | 28.535 | 396 | 264 | 7 | 1 | 390 | 18 | 400 | 1.88e-52 | 186 |
| Msa1385700 | MtrunA17_Chr2g0291591 | 30.380 | 395 | 254 | 8 | 1 | 386 | 68 | 450 | 2.76e-52 | 183 |
| Msa1385700 | MtrunA17_Chr6g0477261 | 32.453 | 265 | 175 | 1 | 130 | 390 | 12 | 276 | 9.03e-50 | 177 |
| Msa1385700 | MtrunA17_Chr2g0287061 | 28.148 | 405 | 227 | 10 | 2 | 392 | 188 | 542 | 1.23e-48 | 176 |
| Msa1385700 | MtrunA17_Chr1g0196541 | 26.119 | 402 | 266 | 7 | 1 | 388 | 1 | 385 | 5.12e-44 | 162 |
| Msa1385700 | MtrunA17_Chr2g0291581 | 28.321 | 399 | 257 | 10 | 1 | 391 | 75 | 452 | 1.32e-43 | 161 |
| Msa1385700 | MtrunA17_Chr7g0258861 | 32.394 | 284 | 188 | 3 | 1 | 282 | 14 | 295 | 2.89e-43 | 153 |
| Msa1385700 | MtrunA17_Chr2g0290391 | 27.206 | 408 | 277 | 7 | 1 | 390 | 55 | 460 | 1.78e-42 | 158 |
| Msa1385700 | MtrunA17_Chr2g0294841 | 28.429 | 401 | 270 | 9 | 3 | 389 | 51 | 448 | 5.65e-42 | 157 |
| Msa1385700 | MtrunA17_Chr5g0448511 | 36.598 | 194 | 118 | 2 | 206 | 394 | 45 | 238 | 2.23e-40 | 150 |
| Msa1385700 | MtrunA17_Chr5g0440451 | 25.412 | 425 | 268 | 12 | 1 | 397 | 47 | 450 | 2.52e-37 | 144 |
| Msa1385700 | MtrunA17_Chr3g0118611 | 30.594 | 219 | 147 | 3 | 173 | 386 | 118 | 336 | 3.15e-34 | 134 |
| Msa1385700 | MtrunA17_Chr1g0149131 | 38.182 | 110 | 63 | 1 | 278 | 382 | 1 | 110 | 3.36e-17 | 77.4 |
| Msa1385700 | MtrunA17_Chr8g0389811 | 39.583 | 96 | 58 | 0 | 3 | 98 | 90 | 185 | 5.64e-16 | 76.3 |
| Msa1385700 | MtrunA17_Chr1g0171741 | 31.496 | 127 | 86 | 1 | 1 | 127 | 137 | 262 | 1.18e-15 | 76.6 |
| Msa1385700 | MtrunA17_Chr8g0340801 | 34.579 | 107 | 68 | 1 | 110 | 216 | 3 | 107 | 1.69e-15 | 72.0 |
| Msa1385700 | MtrunA17_Chr2g0308841 | 40.909 | 66 | 39 | 0 | 331 | 396 | 4 | 69 | 5.91e-14 | 71.6 |
| Msa1385700 | MtrunA17_Chr2g0329361 | 41.414 | 99 | 56 | 2 | 1 | 98 | 65 | 162 | 1.45e-12 | 67.4 |
| Msa1385700 | MtrunA17_Chr6g0473421 | 44.286 | 70 | 39 | 0 | 3 | 72 | 61 | 130 | 3.72e-12 | 63.9 |
| Msa1385700 | MtrunA17_Chr7g0238821 | 33.036 | 112 | 70 | 3 | 1 | 111 | 1 | 108 | 3.82e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385700 | AT4G38180.1 | 33.838 | 396 | 253 | 5 | 1 | 389 | 77 | 470 | 1.24e-71 | 239 |
| Msa1385700 | AT4G15090.1 | 31.234 | 397 | 262 | 6 | 1 | 390 | 55 | 447 | 1.77e-66 | 226 |
| Msa1385700 | AT4G15090.5 | 31.234 | 397 | 262 | 6 | 1 | 390 | 55 | 447 | 1.77e-66 | 226 |
| Msa1385700 | AT4G15090.3 | 31.234 | 397 | 262 | 6 | 1 | 390 | 55 | 447 | 1.77e-66 | 226 |
| Msa1385700 | AT4G15090.2 | 31.234 | 397 | 262 | 6 | 1 | 390 | 55 | 447 | 1.77e-66 | 226 |
| Msa1385700 | AT4G15090.4 | 31.234 | 397 | 262 | 6 | 1 | 390 | 55 | 447 | 1.77e-66 | 226 |
| Msa1385700 | AT3G22170.2 | 30.049 | 406 | 243 | 7 | 1 | 389 | 74 | 455 | 4.07e-56 | 197 |
| Msa1385700 | AT3G22170.1 | 30.049 | 406 | 243 | 7 | 1 | 389 | 74 | 455 | 4.07e-56 | 197 |
| Msa1385700 | AT3G06250.2 | 30.457 | 394 | 219 | 10 | 1 | 386 | 194 | 540 | 2.54e-52 | 186 |
| Msa1385700 | AT3G06250.1 | 30.457 | 394 | 219 | 10 | 1 | 386 | 194 | 540 | 2.54e-52 | 186 |
| Msa1385700 | AT3G06250.3 | 30.457 | 394 | 219 | 10 | 1 | 386 | 194 | 540 | 2.54e-52 | 186 |
| Msa1385700 | AT1G10240.2 | 30.402 | 398 | 263 | 8 | 3 | 389 | 54 | 448 | 8.54e-52 | 184 |
| Msa1385700 | AT1G10240.1 | 30.402 | 398 | 263 | 8 | 3 | 389 | 54 | 448 | 8.54e-52 | 184 |
| Msa1385700 | AT1G76320.3 | 29.695 | 394 | 255 | 7 | 1 | 386 | 1 | 380 | 1.31e-51 | 183 |
| Msa1385700 | AT1G76320.2 | 29.695 | 394 | 255 | 7 | 1 | 386 | 1 | 380 | 3.06e-51 | 183 |
| Msa1385700 | AT1G76320.1 | 29.695 | 394 | 255 | 7 | 1 | 386 | 1 | 380 | 3.18e-51 | 183 |
| Msa1385700 | AT1G76320.4 | 29.695 | 394 | 255 | 7 | 1 | 386 | 1 | 380 | 3.18e-51 | 183 |
| Msa1385700 | AT5G18960.2 | 28.316 | 392 | 233 | 9 | 1 | 386 | 215 | 564 | 1.42e-46 | 171 |
| Msa1385700 | AT5G18960.1 | 28.316 | 392 | 233 | 9 | 1 | 386 | 215 | 564 | 1.42e-46 | 171 |
| Msa1385700 | AT1G80010.1 | 28.288 | 403 | 263 | 9 | 1 | 388 | 99 | 490 | 1.32e-44 | 164 |
| Msa1385700 | AT1G52520.1 | 30.280 | 393 | 249 | 9 | 1 | 386 | 89 | 463 | 8.57e-44 | 162 |
| Msa1385700 | AT4G19990.5 | 26.379 | 417 | 245 | 8 | 2 | 395 | 26 | 403 | 5.02e-41 | 154 |
| Msa1385700 | AT4G19990.7 | 26.379 | 417 | 245 | 8 | 2 | 395 | 40 | 417 | 6.43e-41 | 154 |
| Msa1385700 | AT4G19990.3 | 26.379 | 417 | 245 | 8 | 2 | 395 | 26 | 403 | 6.48e-41 | 154 |
| Msa1385700 | AT4G19990.4 | 26.379 | 417 | 245 | 8 | 2 | 395 | 26 | 403 | 6.48e-41 | 154 |
| Msa1385700 | AT4G19990.6 | 26.379 | 417 | 245 | 8 | 2 | 395 | 26 | 403 | 8.12e-41 | 154 |
| Msa1385700 | AT4G19990.2 | 26.379 | 417 | 245 | 8 | 2 | 395 | 26 | 403 | 8.12e-41 | 154 |
| Msa1385700 | AT5G28530.3 | 26.253 | 419 | 261 | 9 | 3 | 389 | 61 | 463 | 3.72e-39 | 149 |
| Msa1385700 | AT5G28530.2 | 26.253 | 419 | 261 | 9 | 3 | 389 | 61 | 463 | 3.72e-39 | 149 |
| Msa1385700 | AT5G28530.1 | 26.253 | 419 | 261 | 9 | 3 | 389 | 61 | 463 | 4.54e-39 | 148 |
| Msa1385700 | AT2G27110.2 | 26.515 | 396 | 247 | 10 | 1 | 386 | 53 | 414 | 1.64e-37 | 144 |
| Msa1385700 | AT2G27110.1 | 26.515 | 396 | 247 | 10 | 1 | 386 | 53 | 414 | 1.64e-37 | 144 |
| Msa1385700 | AT4G19990.1 | 26.801 | 347 | 204 | 6 | 60 | 395 | 39 | 346 | 8.47e-35 | 136 |
| Msa1385700 | AT2G27110.3 | 29.680 | 219 | 149 | 3 | 173 | 386 | 51 | 269 | 3.85e-33 | 131 |
| Msa1385700 | AT4G38170.1 | 30.303 | 231 | 144 | 6 | 174 | 393 | 18 | 242 | 1.05e-29 | 120 |
| Msa1385700 | AT2G32250.5 | 22.449 | 392 | 252 | 6 | 1 | 386 | 42 | 387 | 5.17e-29 | 119 |
| Msa1385700 | AT2G32250.8 | 28.125 | 192 | 133 | 1 | 200 | 386 | 155 | 346 | 1.17e-28 | 118 |
| Msa1385700 | AT2G32250.7 | 28.125 | 192 | 133 | 1 | 200 | 386 | 155 | 346 | 1.21e-28 | 118 |
| Msa1385700 | AT2G32250.2 | 28.125 | 192 | 133 | 1 | 200 | 386 | 196 | 387 | 1.59e-28 | 118 |
| Msa1385700 | AT2G32250.4 | 28.125 | 192 | 133 | 1 | 200 | 386 | 196 | 387 | 1.59e-28 | 118 |
| Msa1385700 | AT2G32250.6 | 28.125 | 192 | 133 | 1 | 200 | 386 | 196 | 387 | 1.73e-28 | 118 |
| Msa1385700 | AT2G32250.1 | 28.125 | 192 | 133 | 1 | 200 | 386 | 196 | 387 | 1.73e-28 | 118 |
| Msa1385700 | AT2G32250.3 | 28.125 | 192 | 133 | 1 | 200 | 386 | 196 | 387 | 1.73e-28 | 118 |
| Msa1385700 | AT5G28530.4 | 23.020 | 404 | 230 | 11 | 3 | 389 | 61 | 400 | 2.60e-22 | 99.4 |
| Msa1385700 | AT5G28530.5 | 23.020 | 404 | 230 | 11 | 3 | 389 | 61 | 400 | 2.78e-22 | 99.4 |
| Msa1385700 | AT3G07500.1 | 41.748 | 103 | 56 | 3 | 1 | 102 | 37 | 136 | 7.36e-12 | 65.1 |
Find 75 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGATGAATTTGAAGAGTTT+TGG | 0.187483 | tig0020776:-8717 | Msa1385700:CDS |
| AACGTTTGAAATGTCTATTT+TGG | 0.234421 | tig0020776:-9137 | Msa1385700:CDS |
| CACTCACAAACAGTTATATT+TGG | 0.234686 | tig0020776:-8997 | Msa1385700:CDS |
| GGGGACTTGGTGAGGGAAAA+TGG | 0.236738 | tig0020776:-8694 | Msa1385700:CDS |
| AATAAGAACTTGTCATATAA+TGG | 0.247315 | tig0020776:-9349 | Msa1385700:CDS |
| TGCATTTACACCCTGTTTAT+CGG | 0.264525 | tig0020776:-9422 | Msa1385700:CDS |
| TGTTCACTACAGACCCAAAA+AGG | 0.266221 | tig0020776:-9508 | Msa1385700:CDS |
| TTCTTTGTTCTCATATGTTT+TGG | 0.278033 | tig0020776:+8648 | None:intergenic |
| CCATCTGTTACAACTGCTTT+TGG | 0.282718 | tig0020776:+8892 | None:intergenic |
| ACTTAACATTCAGATAGTTT+AGG | 0.298701 | tig0020776:+9208 | None:intergenic |
| CTTAACATTCAGATAGTTTA+GGG | 0.312093 | tig0020776:+9209 | None:intergenic |
| TTCTATGAGGGAGGCGATAA+AGG | 0.334895 | tig0020776:-8863 | Msa1385700:CDS |
| CTGTTAGGAAGAGTGATATT+AGG | 0.340554 | tig0020776:-9671 | Msa1385700:CDS |
| TCCCATACAATCTAGAAAAC+TGG | 0.344570 | tig0020776:+8924 | None:intergenic |
| CATTGGTTGGAGTAGGTTCA+TGG | 0.364482 | tig0020776:+9448 | None:intergenic |
| AGATCAGATTATTTCTGCTT+TGG | 0.376852 | tig0020776:-9099 | Msa1385700:CDS |
| ATAAGAACTTGTCATATAAT+GGG | 0.403187 | tig0020776:-9348 | Msa1385700:CDS |
| AGCATTTATCAAGGTTAGAT+AGG | 0.409294 | tig0020776:-9581 | Msa1385700:CDS |
| CATAGACGATGACGCGTACT+TGG | 0.409842 | tig0020776:+8832 | None:intergenic |
| TATAAGTACGGTAAGTGTAA+TGG | 0.430620 | tig0020776:-9699 | Msa1385700:CDS |
| GATATTAGGCGCAATGTTAA+CGG | 0.449906 | tig0020776:-9657 | Msa1385700:CDS |
| TACGTGCGTGACGATTTCTT+TGG | 0.453713 | tig0020776:-8610 | Msa1385700:CDS |
| CTACGTCTGCGTTGAATTGT+GGG | 0.458858 | tig0020776:-8576 | Msa1385700:CDS |
| ACAAAATCACCAACGGATAG+TGG | 0.461754 | tig0020776:+9034 | None:intergenic |
| GGGATACATGGTGGCTCAGA+AGG | 0.464555 | tig0020776:-9328 | Msa1385700:CDS |
| TAGTGAACACGGAGCCTAGC+TGG | 0.466097 | tig0020776:+9522 | None:intergenic |
| GAGATAAGAAGCATTTATCA+AGG | 0.475640 | tig0020776:-9590 | Msa1385700:CDS |
| GTAGATAAAGCACAGATTGA+TGG | 0.478198 | tig0020776:-9387 | Msa1385700:CDS |
| ATTTGGTGCTGCATTGGTGA+TGG | 0.484577 | tig0020776:-8980 | Msa1385700:CDS |
| CGCGTCATCGTCTATGTGCT+TGG | 0.493517 | tig0020776:-8825 | Msa1385700:CDS |
| AAGGGTGGATATCCCGGTGT+TGG | 0.494812 | tig0020776:-9309 | Msa1385700:CDS |
| ACTACGTCTGCGTTGAATTG+TGG | 0.498022 | tig0020776:-8577 | Msa1385700:CDS |
| AGGGTGGATATCCCGGTGTT+GGG | 0.498763 | tig0020776:-9308 | Msa1385700:CDS |
| GTGCGTGACGATTTCTTTGG+TGG | 0.499699 | tig0020776:-8607 | Msa1385700:CDS |
| GCAGTATGTATGCAACAAGC+AGG | 0.502107 | tig0020776:-9619 | Msa1385700:CDS |
| ATATGAGAACAAAGAATTGT+GGG | 0.511340 | tig0020776:-8641 | Msa1385700:CDS |
| AGTGGCAGAATATTCACAAA+AGG | 0.514210 | tig0020776:+9167 | None:intergenic |
| GCTCAGAAGGGTGGATATCC+CGG | 0.515458 | tig0020776:-9315 | Msa1385700:CDS |
| AGTTATATTTGGTGCTGCAT+TGG | 0.533546 | tig0020776:-8986 | Msa1385700:CDS |
| ATGGAATTGAGAACAATCCA+TGG | 0.534401 | tig0020776:-8675 | Msa1385700:CDS |
| CAGATGGTGACGGTTCTATG+AGG | 0.536155 | tig0020776:-8876 | Msa1385700:CDS |
| GCATCTGAACAAGAATGCTA+TGG | 0.538265 | tig0020776:-8803 | Msa1385700:CDS |
| CATATGAGAACAAAGAATTG+TGG | 0.552735 | tig0020776:-8642 | Msa1385700:CDS |
| ATGTGTGCTGTTATTAAGGA+TGG | 0.553864 | tig0020776:-9246 | Msa1385700:CDS |
| TTGTCATATAATGGGATACA+TGG | 0.555297 | tig0020776:-9340 | Msa1385700:CDS |
| AAACAATAGACACTTATATG+TGG | 0.556264 | tig0020776:-8954 | Msa1385700:CDS |
| TTCTTAGTGAACCCAACACC+GGG | 0.562418 | tig0020776:+9297 | None:intergenic |
| TGTAAATGCACAGCATTGGT+TGG | 0.565762 | tig0020776:+9435 | None:intergenic |
| TACATGGTGGCTCAGAAGGG+TGG | 0.573659 | tig0020776:-9324 | Msa1385700:CDS |
| TTTCAAACGTTCGTCATCAG+TGG | 0.583531 | tig0020776:+9149 | None:intergenic |
| AGGGTGTAAATGCACAGCAT+TGG | 0.584309 | tig0020776:+9431 | None:intergenic |
| CAGTATGTATGCAACAAGCA+GGG | 0.584535 | tig0020776:-9618 | Msa1385700:CDS |
| TTATTTCTGCTTTGGCGATG+TGG | 0.587488 | tig0020776:-9091 | Msa1385700:CDS |
| CCAAAAGCAGTTGTAACAGA+TGG | 0.588696 | tig0020776:-8892 | Msa1385700:CDS |
| TTTCTTAGTGAACCCAACAC+CGG | 0.593472 | tig0020776:+9296 | None:intergenic |
| GAATATTCACAAAAGGAATG+TGG | 0.603006 | tig0020776:+9174 | None:intergenic |
| AACAATAGACACTTATATGT+GGG | 0.603700 | tig0020776:-8953 | Msa1385700:CDS |
| AAAGGAATGTGGATCAGTTG+AGG | 0.611183 | tig0020776:+9185 | None:intergenic |
| GGATACATGGTGGCTCAGAA+GGG | 0.612576 | tig0020776:-9327 | Msa1385700:CDS |
| AATCTGTGCTTTATCTACCT+CGG | 0.613894 | tig0020776:+9392 | None:intergenic |
| AGATGGTGACGGTTCTATGA+GGG | 0.626993 | tig0020776:-8875 | Msa1385700:CDS |
| TGGAATTGAGAACAATCCAT+GGG | 0.627348 | tig0020776:-8674 | Msa1385700:CDS |
| AGTATGTATGCAACAAGCAG+GGG | 0.634341 | tig0020776:-9617 | Msa1385700:CDS |
| TGCACAGCATTGGTTGGAGT+AGG | 0.638605 | tig0020776:+9441 | None:intergenic |
| GAACAAATACCACTATCCGT+TGG | 0.644673 | tig0020776:-9043 | Msa1385700:CDS |
| CTCGTACAAAGTGTCCAGCT+AGG | 0.644688 | tig0020776:-9536 | Msa1385700:CDS |
| CAAATATAACTGTTTGTGAG+TGG | 0.651904 | tig0020776:+8998 | None:intergenic |
| TGGTGACGGTTCTATGAGGG+AGG | 0.661344 | tig0020776:-8872 | Msa1385700:CDS |
| TATGAGGGAGGCGATAAAGG+CGG | 0.662119 | tig0020776:-8860 | Msa1385700:CDS |
| TCATATAATGGGATACATGG+TGG | 0.669224 | tig0020776:-9337 | Msa1385700:CDS |
| CAGCCAGACAAAATCACCAA+CGG | 0.675882 | tig0020776:+9027 | None:intergenic |
| TTAACGGTGAGATTGTAATG+AGG | 0.680367 | tig0020776:-9641 | Msa1385700:CDS |
| GCAGTTGTAACAGATGGTGA+CGG | 0.686599 | tig0020776:-8886 | Msa1385700:CDS |
| TGTTTATCGGAAAATATCCG+AGG | 0.704996 | tig0020776:-9409 | Msa1385700:CDS |
| ATTGATGGTCTTCAGTCACA+CGG | 0.708259 | tig0020776:-9372 | Msa1385700:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACGATTTTTATTATAAGTA+CGG | - | tig0020776:8594-8613 | Msa1385700:CDS | 15.0% |
| !!! | TACGATTTTTATTATAAGTA+CGG | - | tig0020776:8594-8613 | Msa1385700:CDS | 15.0% |
| !! | AATAAGAACTTGTCATATAA+TGG | - | tig0020776:8956-8975 | Msa1385700:CDS | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | - | tig0020776:8957-8976 | Msa1385700:CDS | 20.0% |
| !! | AATAAGAACTTGTCATATAA+TGG | - | tig0020776:8956-8975 | Msa1385700:CDS | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | - | tig0020776:8957-8976 | Msa1385700:CDS | 20.0% |
| !! | AAAAATGTGTGCTGTTATTA+AGG | - | tig0020776:9055-9074 | Msa1385700:CDS | 25.0% |
| ! | CTTAACATTCAGATAGTTTA+GGG | + | tig0020776:9099-9118 | None:intergenic | 25.0% |
| ! | ACTTAACATTCAGATAGTTT+AGG | + | tig0020776:9100-9119 | None:intergenic | 25.0% |
| !!! | AACGTTTGAAATGTCTATTT+TGG | - | tig0020776:9168-9187 | Msa1385700:CDS | 25.0% |
| !!! | ACGTTTGAAATGTCTATTTT+GGG | - | tig0020776:9169-9188 | Msa1385700:CDS | 25.0% |
| ! | AAACAATAGACACTTATATG+TGG | - | tig0020776:9351-9370 | Msa1385700:CDS | 25.0% |
| ! | AACAATAGACACTTATATGT+GGG | - | tig0020776:9352-9371 | Msa1385700:CDS | 25.0% |
| !! | AGCAATGTACTCTAATTTTA+CGG | - | tig0020776:9565-9584 | Msa1385700:CDS | 25.0% |
| !! | TTCTTTGTTCTCATATGTTT+TGG | + | tig0020776:9660-9679 | None:intergenic | 25.0% |
| ! | ATATGAGAACAAAGAATTGT+GGG | - | tig0020776:9664-9683 | Msa1385700:CDS | 25.0% |
| !! | AAAAATGTGTGCTGTTATTA+AGG | - | tig0020776:9055-9074 | Msa1385700:CDS | 25.0% |
| ! | CTTAACATTCAGATAGTTTA+GGG | + | tig0020776:9099-9118 | None:intergenic | 25.0% |
| ! | ACTTAACATTCAGATAGTTT+AGG | + | tig0020776:9100-9119 | None:intergenic | 25.0% |
| !!! | AACGTTTGAAATGTCTATTT+TGG | - | tig0020776:9168-9187 | Msa1385700:CDS | 25.0% |
| !!! | ACGTTTGAAATGTCTATTTT+GGG | - | tig0020776:9169-9188 | Msa1385700:CDS | 25.0% |
| ! | AAACAATAGACACTTATATG+TGG | - | tig0020776:9351-9370 | Msa1385700:CDS | 25.0% |
| ! | AACAATAGACACTTATATGT+GGG | - | tig0020776:9352-9371 | Msa1385700:CDS | 25.0% |
| !! | AGCAATGTACTCTAATTTTA+CGG | - | tig0020776:9565-9584 | Msa1385700:CDS | 25.0% |
| !! | TTCTTTGTTCTCATATGTTT+TGG | + | tig0020776:9660-9679 | None:intergenic | 25.0% |
| ! | ATATGAGAACAAAGAATTGT+GGG | - | tig0020776:9664-9683 | Msa1385700:CDS | 25.0% |
| TATAAGTACGGTAAGTGTAA+TGG | - | tig0020776:8606-8625 | Msa1385700:CDS | 30.0% | |
| !! | GAGATAAGAAGCATTTATCA+AGG | - | tig0020776:8715-8734 | Msa1385700:CDS | 30.0% |
| AGCATTTATCAAGGTTAGAT+AGG | - | tig0020776:8724-8743 | Msa1385700:CDS | 30.0% | |
| ! | ACAACATATCTACCCTTTTT+GGG | + | tig0020776:8813-8832 | None:intergenic | 30.0% |
| !! | TGTTGTGTCAATTTTTGAAG+AGG | - | tig0020776:8827-8846 | Msa1385700:CDS | 30.0% |
| !! | GTTGTGTCAATTTTTGAAGA+GGG | - | tig0020776:8828-8847 | Msa1385700:CDS | 30.0% |
| ! | TTGTCATATAATGGGATACA+TGG | - | tig0020776:8965-8984 | Msa1385700:CDS | 30.0% |
| GAATATTCACAAAAGGAATG+TGG | + | tig0020776:9134-9153 | None:intergenic | 30.0% | |
| !! | AGATCAGATTATTTCTGCTT+TGG | - | tig0020776:9206-9225 | Msa1385700:CDS | 30.0% |
| CAAATATAACTGTTTGTGAG+TGG | + | tig0020776:9310-9329 | None:intergenic | 30.0% | |
| CACTCACAAACAGTTATATT+TGG | - | tig0020776:9308-9327 | Msa1385700:CDS | 30.0% | |
| ! | ACCAGTTTTCTAGATTGTAT+GGG | - | tig0020776:9380-9399 | Msa1385700:CDS | 30.0% |
| !!! | TGTCAAGAATTCAGCTTTTT+TGG | - | tig0020776:9529-9548 | Msa1385700:CDS | 30.0% |
| !!! | AAGAATTCAGCTTTTTTGGA+AGG | - | tig0020776:9533-9552 | Msa1385700:CDS | 30.0% |
| ! | AATGTACTCTAATTTTACGG+AGG | - | tig0020776:9568-9587 | Msa1385700:CDS | 30.0% |
| ! | AGGATGAATTTGAAGAGTTT+TGG | - | tig0020776:9588-9607 | Msa1385700:CDS | 30.0% |
| ! | GGATGAATTTGAAGAGTTTT+GGG | - | tig0020776:9589-9608 | Msa1385700:CDS | 30.0% |
| ! | GATGAATTTGAAGAGTTTTG+GGG | - | tig0020776:9590-9609 | Msa1385700:CDS | 30.0% |
| !! | ATGAATTTGAAGAGTTTTGG+GGG | - | tig0020776:9591-9610 | Msa1385700:CDS | 30.0% |
| CATATGAGAACAAAGAATTG+TGG | - | tig0020776:9663-9682 | Msa1385700:CDS | 30.0% | |
| TATAAGTACGGTAAGTGTAA+TGG | - | tig0020776:8606-8625 | Msa1385700:CDS | 30.0% | |
| !! | GAGATAAGAAGCATTTATCA+AGG | - | tig0020776:8715-8734 | Msa1385700:CDS | 30.0% |
| AGCATTTATCAAGGTTAGAT+AGG | - | tig0020776:8724-8743 | Msa1385700:CDS | 30.0% | |
| ! | ACAACATATCTACCCTTTTT+GGG | + | tig0020776:8813-8832 | None:intergenic | 30.0% |
| !! | TGTTGTGTCAATTTTTGAAG+AGG | - | tig0020776:8827-8846 | Msa1385700:CDS | 30.0% |
| !! | GTTGTGTCAATTTTTGAAGA+GGG | - | tig0020776:8828-8847 | Msa1385700:CDS | 30.0% |
| ! | TTGTCATATAATGGGATACA+TGG | - | tig0020776:8965-8984 | Msa1385700:CDS | 30.0% |
| GAATATTCACAAAAGGAATG+TGG | + | tig0020776:9134-9153 | None:intergenic | 30.0% | |
| !! | AGATCAGATTATTTCTGCTT+TGG | - | tig0020776:9206-9225 | Msa1385700:CDS | 30.0% |
| CAAATATAACTGTTTGTGAG+TGG | + | tig0020776:9310-9329 | None:intergenic | 30.0% | |
| CACTCACAAACAGTTATATT+TGG | - | tig0020776:9308-9327 | Msa1385700:CDS | 30.0% | |
| ! | ACCAGTTTTCTAGATTGTAT+GGG | - | tig0020776:9380-9399 | Msa1385700:CDS | 30.0% |
| !!! | TGTCAAGAATTCAGCTTTTT+TGG | - | tig0020776:9529-9548 | Msa1385700:CDS | 30.0% |
| !!! | AAGAATTCAGCTTTTTTGGA+AGG | - | tig0020776:9533-9552 | Msa1385700:CDS | 30.0% |
| ! | AATGTACTCTAATTTTACGG+AGG | - | tig0020776:9568-9587 | Msa1385700:CDS | 30.0% |
| ! | AGGATGAATTTGAAGAGTTT+TGG | - | tig0020776:9588-9607 | Msa1385700:CDS | 30.0% |
| ! | GGATGAATTTGAAGAGTTTT+GGG | - | tig0020776:9589-9608 | Msa1385700:CDS | 30.0% |
| ! | GATGAATTTGAAGAGTTTTG+GGG | - | tig0020776:9590-9609 | Msa1385700:CDS | 30.0% |
| !! | ATGAATTTGAAGAGTTTTGG+GGG | - | tig0020776:9591-9610 | Msa1385700:CDS | 30.0% |
| CATATGAGAACAAAGAATTG+TGG | - | tig0020776:9663-9682 | Msa1385700:CDS | 30.0% | |
| !!! | AGTGTAATGGTTTTGCTGTT+AGG | - | tig0020776:8619-8638 | Msa1385700:CDS | 35.0% |
| CTGTTAGGAAGAGTGATATT+AGG | - | tig0020776:8634-8653 | Msa1385700:CDS | 35.0% | |
| GATATTAGGCGCAATGTTAA+CGG | - | tig0020776:8648-8667 | Msa1385700:CDS | 35.0% | |
| TTAACGGTGAGATTGTAATG+AGG | - | tig0020776:8664-8683 | Msa1385700:CDS | 35.0% | |
| ! | CACAACATATCTACCCTTTT+TGG | + | tig0020776:8814-8833 | None:intergenic | 35.0% |
| TGCATTTACACCCTGTTTAT+CGG | - | tig0020776:8883-8902 | Msa1385700:CDS | 35.0% | |
| ! | CGGATATTTTCCGATAAACA+GGG | + | tig0020776:8896-8915 | None:intergenic | 35.0% |
| ! | TCGGATATTTTCCGATAAAC+AGG | + | tig0020776:8897-8916 | None:intergenic | 35.0% |
| TGTTTATCGGAAAATATCCG+AGG | - | tig0020776:8896-8915 | Msa1385700:CDS | 35.0% | |
| AATCTGTGCTTTATCTACCT+CGG | + | tig0020776:8916-8935 | None:intergenic | 35.0% | |
| GTAGATAAAGCACAGATTGA+TGG | - | tig0020776:8918-8937 | Msa1385700:CDS | 35.0% | |
| ! | TCATATAATGGGATACATGG+TGG | - | tig0020776:8968-8987 | Msa1385700:CDS | 35.0% |
| ! | ATGTGTGCTGTTATTAAGGA+TGG | - | tig0020776:9059-9078 | Msa1385700:CDS | 35.0% |
| AGTGGCAGAATATTCACAAA+AGG | + | tig0020776:9141-9160 | None:intergenic | 35.0% | |
| !! | AAATGTCTATTTTGGGCAGA+TGG | - | tig0020776:9176-9195 | Msa1385700:CDS | 35.0% |
| !! | AGTTATATTTGGTGCTGCAT+TGG | - | tig0020776:9319-9338 | Msa1385700:CDS | 35.0% |
| ! | GACCAGTTTTCTAGATTGTA+TGG | - | tig0020776:9379-9398 | Msa1385700:CDS | 35.0% |
| TCCCATACAATCTAGAAAAC+TGG | + | tig0020776:9384-9403 | None:intergenic | 35.0% | |
| !!! | TGAATTTGAAGAGTTTTGGG+GGG | - | tig0020776:9592-9611 | Msa1385700:CDS | 35.0% |
| ATGGAATTGAGAACAATCCA+TGG | - | tig0020776:9630-9649 | Msa1385700:CDS | 35.0% | |
| TGGAATTGAGAACAATCCAT+GGG | - | tig0020776:9631-9650 | Msa1385700:CDS | 35.0% | |
| !!! | TCATATGTTTTGGTAACCCA+TGG | + | tig0020776:9650-9669 | None:intergenic | 35.0% |
| !!! | AGTGTAATGGTTTTGCTGTT+AGG | - | tig0020776:8619-8638 | Msa1385700:CDS | 35.0% |
| CTGTTAGGAAGAGTGATATT+AGG | - | tig0020776:8634-8653 | Msa1385700:CDS | 35.0% | |
| GATATTAGGCGCAATGTTAA+CGG | - | tig0020776:8648-8667 | Msa1385700:CDS | 35.0% | |
| TTAACGGTGAGATTGTAATG+AGG | - | tig0020776:8664-8683 | Msa1385700:CDS | 35.0% | |
| ! | CACAACATATCTACCCTTTT+TGG | + | tig0020776:8814-8833 | None:intergenic | 35.0% |
| TGCATTTACACCCTGTTTAT+CGG | - | tig0020776:8883-8902 | Msa1385700:CDS | 35.0% | |
| ! | CGGATATTTTCCGATAAACA+GGG | + | tig0020776:8896-8915 | None:intergenic | 35.0% |
| ! | TCGGATATTTTCCGATAAAC+AGG | + | tig0020776:8897-8916 | None:intergenic | 35.0% |
| TGTTTATCGGAAAATATCCG+AGG | - | tig0020776:8896-8915 | Msa1385700:CDS | 35.0% | |
| AATCTGTGCTTTATCTACCT+CGG | + | tig0020776:8916-8935 | None:intergenic | 35.0% | |
| GTAGATAAAGCACAGATTGA+TGG | - | tig0020776:8918-8937 | Msa1385700:CDS | 35.0% | |
| ! | TCATATAATGGGATACATGG+TGG | - | tig0020776:8968-8987 | Msa1385700:CDS | 35.0% |
| ! | ATGTGTGCTGTTATTAAGGA+TGG | - | tig0020776:9059-9078 | Msa1385700:CDS | 35.0% |
| AGTGGCAGAATATTCACAAA+AGG | + | tig0020776:9141-9160 | None:intergenic | 35.0% | |
| !! | AAATGTCTATTTTGGGCAGA+TGG | - | tig0020776:9176-9195 | Msa1385700:CDS | 35.0% |
| !! | AGTTATATTTGGTGCTGCAT+TGG | - | tig0020776:9319-9338 | Msa1385700:CDS | 35.0% |
| ! | GACCAGTTTTCTAGATTGTA+TGG | - | tig0020776:9379-9398 | Msa1385700:CDS | 35.0% |
| TCCCATACAATCTAGAAAAC+TGG | + | tig0020776:9384-9403 | None:intergenic | 35.0% | |
| !!! | TGAATTTGAAGAGTTTTGGG+GGG | - | tig0020776:9592-9611 | Msa1385700:CDS | 35.0% |
| ATGGAATTGAGAACAATCCA+TGG | - | tig0020776:9630-9649 | Msa1385700:CDS | 35.0% | |
| TGGAATTGAGAACAATCCAT+GGG | - | tig0020776:9631-9650 | Msa1385700:CDS | 35.0% | |
| !!! | TCATATGTTTTGGTAACCCA+TGG | + | tig0020776:9650-9669 | None:intergenic | 35.0% |
| CAGTATGTATGCAACAAGCA+GGG | - | tig0020776:8687-8706 | Msa1385700:CDS | 40.0% | |
| AGTATGTATGCAACAAGCAG+GGG | - | tig0020776:8688-8707 | Msa1385700:CDS | 40.0% | |
| !! | TTTTGGGTCTGTAGTGAACA+CGG | + | tig0020776:8797-8816 | None:intergenic | 40.0% |
| TGTTCACTACAGACCCAAAA+AGG | - | tig0020776:8797-8816 | Msa1385700:CDS | 40.0% | |
| GTTCACTACAGACCCAAAAA+GGG | - | tig0020776:8798-8817 | Msa1385700:CDS | 40.0% | |
| !! | TGTAAATGCACAGCATTGGT+TGG | + | tig0020776:8873-8892 | None:intergenic | 40.0% |
| ! | ATTGATGGTCTTCAGTCACA+CGG | - | tig0020776:8933-8952 | Msa1385700:CDS | 40.0% |
| TTTCTTAGTGAACCCAACAC+CGG | + | tig0020776:9012-9031 | None:intergenic | 40.0% | |
| AAAGGAATGTGGATCAGTTG+AGG | + | tig0020776:9123-9142 | None:intergenic | 40.0% | |
| TTTCAAACGTTCGTCATCAG+TGG | + | tig0020776:9159-9178 | None:intergenic | 40.0% | |
| !! | TTATTTCTGCTTTGGCGATG+TGG | - | tig0020776:9214-9233 | Msa1385700:CDS | 40.0% |
| GAACAAATACCACTATCCGT+TGG | - | tig0020776:9262-9281 | Msa1385700:CDS | 40.0% | |
| ACAAAATCACCAACGGATAG+TGG | + | tig0020776:9274-9293 | None:intergenic | 40.0% | |
| !!! | TATCCGTTGGTGATTTTGTC+TGG | - | tig0020776:9275-9294 | Msa1385700:CDS | 40.0% |
| ! | CCATCTGTTACAACTGCTTT+TGG | + | tig0020776:9416-9435 | None:intergenic | 40.0% |
| CCAAAAGCAGTTGTAACAGA+TGG | - | tig0020776:9413-9432 | Msa1385700:CDS | 40.0% | |
| GCATCTGAACAAGAATGCTA+TGG | - | tig0020776:9502-9521 | Msa1385700:CDS | 40.0% | |
| CAGTATGTATGCAACAAGCA+GGG | - | tig0020776:8687-8706 | Msa1385700:CDS | 40.0% | |
| AGTATGTATGCAACAAGCAG+GGG | - | tig0020776:8688-8707 | Msa1385700:CDS | 40.0% | |
| !! | TTTTGGGTCTGTAGTGAACA+CGG | + | tig0020776:8797-8816 | None:intergenic | 40.0% |
| TGTTCACTACAGACCCAAAA+AGG | - | tig0020776:8797-8816 | Msa1385700:CDS | 40.0% | |
| GTTCACTACAGACCCAAAAA+GGG | - | tig0020776:8798-8817 | Msa1385700:CDS | 40.0% | |
| !! | TGTAAATGCACAGCATTGGT+TGG | + | tig0020776:8873-8892 | None:intergenic | 40.0% |
| ! | ATTGATGGTCTTCAGTCACA+CGG | - | tig0020776:8933-8952 | Msa1385700:CDS | 40.0% |
| TTTCTTAGTGAACCCAACAC+CGG | + | tig0020776:9012-9031 | None:intergenic | 40.0% | |
| AAAGGAATGTGGATCAGTTG+AGG | + | tig0020776:9123-9142 | None:intergenic | 40.0% | |
| TTTCAAACGTTCGTCATCAG+TGG | + | tig0020776:9159-9178 | None:intergenic | 40.0% | |
| !! | TTATTTCTGCTTTGGCGATG+TGG | - | tig0020776:9214-9233 | Msa1385700:CDS | 40.0% |
| GAACAAATACCACTATCCGT+TGG | - | tig0020776:9262-9281 | Msa1385700:CDS | 40.0% | |
| ACAAAATCACCAACGGATAG+TGG | + | tig0020776:9274-9293 | None:intergenic | 40.0% | |
| !!! | TATCCGTTGGTGATTTTGTC+TGG | - | tig0020776:9275-9294 | Msa1385700:CDS | 40.0% |
| ! | CCATCTGTTACAACTGCTTT+TGG | + | tig0020776:9416-9435 | None:intergenic | 40.0% |
| CCAAAAGCAGTTGTAACAGA+TGG | - | tig0020776:9413-9432 | Msa1385700:CDS | 40.0% | |
| GCATCTGAACAAGAATGCTA+TGG | - | tig0020776:9502-9521 | Msa1385700:CDS | 40.0% | |
| GCAGTATGTATGCAACAAGC+AGG | - | tig0020776:8686-8705 | Msa1385700:CDS | 45.0% | |
| ! | CATTGGTTGGAGTAGGTTCA+TGG | + | tig0020776:8860-8879 | None:intergenic | 45.0% |
| AGGGTGTAAATGCACAGCAT+TGG | + | tig0020776:8877-8896 | None:intergenic | 45.0% | |
| TTCTTAGTGAACCCAACACC+GGG | + | tig0020776:9011-9030 | None:intergenic | 45.0% | |
| CAGCCAGACAAAATCACCAA+CGG | + | tig0020776:9281-9300 | None:intergenic | 45.0% | |
| !! | ATTTGGTGCTGCATTGGTGA+TGG | - | tig0020776:9325-9344 | Msa1385700:CDS | 45.0% |
| GCAGTTGTAACAGATGGTGA+CGG | - | tig0020776:9419-9438 | Msa1385700:CDS | 45.0% | |
| !! | AGATGGTGACGGTTCTATGA+GGG | - | tig0020776:9430-9449 | Msa1385700:CDS | 45.0% |
| TTCTATGAGGGAGGCGATAA+AGG | - | tig0020776:9442-9461 | Msa1385700:CDS | 45.0% | |
| TACGTGCGTGACGATTTCTT+TGG | - | tig0020776:9695-9714 | Msa1385700:CDS | 45.0% | |
| ACTACGTCTGCGTTGAATTG+TGG | - | tig0020776:9728-9747 | Msa1385700:CDS | 45.0% | |
| CTACGTCTGCGTTGAATTGT+GGG | - | tig0020776:9729-9748 | Msa1385700:CDS | 45.0% | |
| GCAGTATGTATGCAACAAGC+AGG | - | tig0020776:8686-8705 | Msa1385700:CDS | 45.0% | |
| ! | CATTGGTTGGAGTAGGTTCA+TGG | + | tig0020776:8860-8879 | None:intergenic | 45.0% |
| AGGGTGTAAATGCACAGCAT+TGG | + | tig0020776:8877-8896 | None:intergenic | 45.0% | |
| TTCTTAGTGAACCCAACACC+GGG | + | tig0020776:9011-9030 | None:intergenic | 45.0% | |
| CAGCCAGACAAAATCACCAA+CGG | + | tig0020776:9281-9300 | None:intergenic | 45.0% | |
| !! | ATTTGGTGCTGCATTGGTGA+TGG | - | tig0020776:9325-9344 | Msa1385700:CDS | 45.0% |
| GCAGTTGTAACAGATGGTGA+CGG | - | tig0020776:9419-9438 | Msa1385700:CDS | 45.0% | |
| !! | AGATGGTGACGGTTCTATGA+GGG | - | tig0020776:9430-9449 | Msa1385700:CDS | 45.0% |
| TTCTATGAGGGAGGCGATAA+AGG | - | tig0020776:9442-9461 | Msa1385700:CDS | 45.0% | |
| TACGTGCGTGACGATTTCTT+TGG | - | tig0020776:9695-9714 | Msa1385700:CDS | 45.0% | |
| ACTACGTCTGCGTTGAATTG+TGG | - | tig0020776:9728-9747 | Msa1385700:CDS | 45.0% | |
| CTACGTCTGCGTTGAATTGT+GGG | - | tig0020776:9729-9748 | Msa1385700:CDS | 45.0% | |
| ! | CTCGTACAAAGTGTCCAGCT+AGG | - | tig0020776:8769-8788 | Msa1385700:CDS | 50.0% |
| !! | TGCACAGCATTGGTTGGAGT+AGG | + | tig0020776:8867-8886 | None:intergenic | 50.0% |
| GGATACATGGTGGCTCAGAA+GGG | - | tig0020776:8978-8997 | Msa1385700:CDS | 50.0% | |
| !! | CAGATGGTGACGGTTCTATG+AGG | - | tig0020776:9429-9448 | Msa1385700:CDS | 50.0% |
| TATGAGGGAGGCGATAAAGG+CGG | - | tig0020776:9445-9464 | Msa1385700:CDS | 50.0% | |
| CATAGACGATGACGCGTACT+TGG | + | tig0020776:9476-9495 | None:intergenic | 50.0% | |
| !!! | TGAAGAGTTTTGGGGGGACT+TGG | - | tig0020776:9598-9617 | Msa1385700:CDS | 50.0% |
| GTGCGTGACGATTTCTTTGG+TGG | - | tig0020776:9698-9717 | Msa1385700:CDS | 50.0% | |
| ! | CTCGTACAAAGTGTCCAGCT+AGG | - | tig0020776:8769-8788 | Msa1385700:CDS | 50.0% |
| !! | TGCACAGCATTGGTTGGAGT+AGG | + | tig0020776:8867-8886 | None:intergenic | 50.0% |
| GGATACATGGTGGCTCAGAA+GGG | - | tig0020776:8978-8997 | Msa1385700:CDS | 50.0% | |
| !! | CAGATGGTGACGGTTCTATG+AGG | - | tig0020776:9429-9448 | Msa1385700:CDS | 50.0% |
| TATGAGGGAGGCGATAAAGG+CGG | - | tig0020776:9445-9464 | Msa1385700:CDS | 50.0% | |
| CATAGACGATGACGCGTACT+TGG | + | tig0020776:9476-9495 | None:intergenic | 50.0% | |
| !!! | TGAAGAGTTTTGGGGGGACT+TGG | - | tig0020776:9598-9617 | Msa1385700:CDS | 50.0% |
| GTGCGTGACGATTTCTTTGG+TGG | - | tig0020776:9698-9717 | Msa1385700:CDS | 50.0% | |
| TAGTGAACACGGAGCCTAGC+TGG | + | tig0020776:8786-8805 | None:intergenic | 55.0% | |
| GGGATACATGGTGGCTCAGA+AGG | - | tig0020776:8977-8996 | Msa1385700:CDS | 55.0% | |
| TACATGGTGGCTCAGAAGGG+TGG | - | tig0020776:8981-9000 | Msa1385700:CDS | 55.0% | |
| GCTCAGAAGGGTGGATATCC+CGG | - | tig0020776:8990-9009 | Msa1385700:CDS | 55.0% | |
| AAGGGTGGATATCCCGGTGT+TGG | - | tig0020776:8996-9015 | Msa1385700:CDS | 55.0% | |
| AGGGTGGATATCCCGGTGTT+GGG | - | tig0020776:8997-9016 | Msa1385700:CDS | 55.0% | |
| !! | TGGTGACGGTTCTATGAGGG+AGG | - | tig0020776:9433-9452 | Msa1385700:CDS | 55.0% |
| CGCGTCATCGTCTATGTGCT+TGG | - | tig0020776:9480-9499 | Msa1385700:CDS | 55.0% | |
| !!! | AGTTTTGGGGGGACTTGGTG+AGG | - | tig0020776:9603-9622 | Msa1385700:CDS | 55.0% |
| !!! | GTTTTGGGGGGACTTGGTGA+GGG | - | tig0020776:9604-9623 | Msa1385700:CDS | 55.0% |
| !! | GGGGACTTGGTGAGGGAAAA+TGG | - | tig0020776:9611-9630 | Msa1385700:CDS | 55.0% |
| TAGTGAACACGGAGCCTAGC+TGG | + | tig0020776:8786-8805 | None:intergenic | 55.0% | |
| GGGATACATGGTGGCTCAGA+AGG | - | tig0020776:8977-8996 | Msa1385700:CDS | 55.0% | |
| TACATGGTGGCTCAGAAGGG+TGG | - | tig0020776:8981-9000 | Msa1385700:CDS | 55.0% | |
| GCTCAGAAGGGTGGATATCC+CGG | - | tig0020776:8990-9009 | Msa1385700:CDS | 55.0% | |
| AAGGGTGGATATCCCGGTGT+TGG | - | tig0020776:8996-9015 | Msa1385700:CDS | 55.0% | |
| AGGGTGGATATCCCGGTGTT+GGG | - | tig0020776:8997-9016 | Msa1385700:CDS | 55.0% | |
| !! | TGGTGACGGTTCTATGAGGG+AGG | - | tig0020776:9433-9452 | Msa1385700:CDS | 55.0% |
| CGCGTCATCGTCTATGTGCT+TGG | - | tig0020776:9480-9499 | Msa1385700:CDS | 55.0% | |
| !!! | AGTTTTGGGGGGACTTGGTG+AGG | - | tig0020776:9603-9622 | Msa1385700:CDS | 55.0% |
| !!! | GTTTTGGGGGGACTTGGTGA+GGG | - | tig0020776:9604-9623 | Msa1385700:CDS | 55.0% |
| !! | GGGGACTTGGTGAGGGAAAA+TGG | - | tig0020776:9611-9630 | Msa1385700:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020776 | gene | 8567 | 9760 | 8567 | ID=Msa1385700;Name=Msa1385700 |
| tig0020776 | mRNA | 8567 | 9760 | 8567 | ID=Msa1385700-mRNA-1;Parent=Msa1385700;Name=Msa1385700-mRNA-1;_AED=0.43;_eAED=0.46;_QI=0|-1|0|1|-1|1|1|0|397 |
| tig0020776 | exon | 8567 | 9760 | 8567 | ID=Msa1385700-mRNA-1:exon:9840;Parent=Msa1385700-mRNA-1 |
| tig0020776 | CDS | 8567 | 9760 | 8567 | ID=Msa1385700-mRNA-1:cds;Parent=Msa1385700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
