Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1387030 | XP_039688319.1 | 79.610 | 564 | 92 | 3 | 1 | 541 | 1 | 564 | 0.0 | 882 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1387030 | sp|Q7XJK5|AGL90_ARATH | 33.813 | 139 | 84 | 1 | 7 | 137 | 2 | 140 | 1.92e-19 | 92.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1387030 | A0A072V0I7 | 79.610 | 564 | 92 | 3 | 1 | 541 | 1 | 564 | 0.0 | 882 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1387030 | TF | MADS-M-type |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1387030 | MtrunA17_Chr3g0128721 | 79.610 | 564 | 92 | 3 | 1 | 541 | 1 | 564 | 0.0 | 882 |
| Msa1387030 | MtrunA17_Chr4g0008701 | 44.930 | 572 | 225 | 11 | 1 | 541 | 1 | 513 | 4.06e-118 | 358 |
| Msa1387030 | MtrunA17_Chr7g0267601 | 48.133 | 482 | 190 | 10 | 1 | 431 | 1 | 473 | 1.37e-117 | 357 |
| Msa1387030 | MtrunA17_Chr8g0361741 | 47.080 | 274 | 121 | 3 | 13 | 266 | 13 | 282 | 2.35e-62 | 206 |
| Msa1387030 | MtrunA17_Chr5g0432691 | 32.258 | 155 | 105 | 0 | 7 | 161 | 4 | 158 | 3.21e-23 | 96.3 |
| Msa1387030 | MtrunA17_Chr8g0351751 | 34.810 | 158 | 98 | 3 | 4 | 157 | 1 | 157 | 4.87e-21 | 92.4 |
| Msa1387030 | MtrunA17_Chr4g0014321 | 32.450 | 151 | 101 | 1 | 6 | 155 | 3 | 153 | 9.62e-21 | 91.3 |
| Msa1387030 | MtrunA17_Chr2g0283941 | 30.323 | 155 | 107 | 1 | 7 | 160 | 4 | 158 | 1.13e-19 | 88.6 |
| Msa1387030 | MtrunA17_Chr4g0014031 | 32.692 | 156 | 104 | 1 | 6 | 160 | 3 | 158 | 2.90e-19 | 87.0 |
| Msa1387030 | MtrunA17_Chr4g0013041 | 34.000 | 150 | 96 | 2 | 7 | 155 | 4 | 151 | 3.72e-19 | 86.3 |
| Msa1387030 | MtrunA17_Chr3g0107381 | 28.289 | 152 | 109 | 0 | 6 | 157 | 3 | 154 | 2.18e-18 | 84.3 |
| Msa1387030 | MtrunA17_Chr3g0107341 | 32.414 | 145 | 98 | 0 | 6 | 150 | 2 | 146 | 8.59e-18 | 80.9 |
| Msa1387030 | MtrunA17_Chr3g0107351 | 29.677 | 155 | 109 | 0 | 6 | 160 | 2 | 156 | 1.00e-17 | 80.5 |
| Msa1387030 | MtrunA17_Chr3g0110131 | 28.846 | 156 | 111 | 0 | 6 | 161 | 3 | 158 | 1.68e-17 | 82.0 |
| Msa1387030 | MtrunA17_Chr2g0296831 | 33.333 | 120 | 80 | 0 | 6 | 125 | 3 | 122 | 2.16e-17 | 78.6 |
| Msa1387030 | MtrunA17_Chr3g0107331 | 28.662 | 157 | 112 | 0 | 6 | 162 | 2 | 158 | 3.13e-17 | 79.3 |
| Msa1387030 | MtrunA17_Chr3g0107361 | 29.032 | 155 | 110 | 0 | 6 | 160 | 2 | 156 | 7.84e-17 | 78.2 |
| Msa1387030 | MtrunA17_Chr4g0014131 | 31.967 | 122 | 82 | 1 | 37 | 157 | 34 | 155 | 3.81e-16 | 77.8 |
| Msa1387030 | MtrunA17_Chr1g0197261 | 29.677 | 155 | 108 | 1 | 6 | 160 | 3 | 156 | 4.76e-15 | 72.8 |
| Msa1387030 | MtrunA17_Chr1g0197461 | 26.897 | 145 | 105 | 1 | 6 | 150 | 2 | 145 | 1.08e-14 | 71.6 |
| Msa1387030 | MtrunA17_Chr4g0014121 | 36.458 | 96 | 61 | 0 | 37 | 132 | 62 | 157 | 3.80e-14 | 71.2 |
| Msa1387030 | MtrunA17_Chr1g0197321 | 28.289 | 152 | 98 | 2 | 6 | 157 | 3 | 143 | 7.11e-14 | 69.3 |
| Msa1387030 | MtrunA17_Chr5g0420351 | 29.703 | 101 | 70 | 1 | 6 | 106 | 3 | 102 | 1.31e-11 | 62.8 |
| Msa1387030 | MtrunA17_Chr1g0188681 | 28.244 | 131 | 93 | 1 | 6 | 136 | 3 | 132 | 6.91e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1387030 | AT5G27960.1 | 33.813 | 139 | 84 | 1 | 7 | 137 | 2 | 140 | 1.96e-20 | 92.8 |
| Msa1387030 | AT5G26650.1 | 32.374 | 139 | 86 | 1 | 7 | 137 | 2 | 140 | 3.77e-20 | 92.8 |
| Msa1387030 | AT1G65300.1 | 32.258 | 155 | 96 | 2 | 6 | 152 | 2 | 155 | 9.74e-20 | 90.1 |
| Msa1387030 | AT2G40210.1 | 30.233 | 172 | 115 | 3 | 4 | 174 | 1 | 168 | 4.76e-18 | 86.7 |
| Msa1387030 | AT3G05860.3 | 27.703 | 148 | 105 | 2 | 4 | 150 | 1 | 147 | 4.07e-15 | 75.9 |
| Msa1387030 | AT3G05860.1 | 27.703 | 148 | 105 | 2 | 4 | 150 | 1 | 147 | 4.97e-15 | 75.9 |
| Msa1387030 | AT1G31630.1 | 34.146 | 123 | 79 | 2 | 6 | 128 | 2 | 122 | 8.26e-15 | 76.3 |
| Msa1387030 | AT5G48670.1 | 29.677 | 155 | 107 | 2 | 6 | 159 | 3 | 156 | 1.27e-14 | 75.5 |
| Msa1387030 | AT3G05860.2 | 31.667 | 120 | 80 | 2 | 6 | 124 | 3 | 121 | 1.52e-14 | 73.2 |
| Msa1387030 | AT1G65330.1 | 27.742 | 155 | 103 | 2 | 8 | 154 | 4 | 157 | 4.83e-14 | 73.2 |
| Msa1387030 | AT2G15660.1 | 30.597 | 134 | 85 | 3 | 41 | 170 | 31 | 160 | 7.69e-14 | 72.0 |
| Msa1387030 | AT2G28700.1 | 33.594 | 128 | 71 | 3 | 4 | 124 | 1 | 121 | 8.13e-14 | 73.2 |
| Msa1387030 | AT1G22590.2 | 25.316 | 158 | 109 | 3 | 6 | 160 | 3 | 154 | 4.55e-12 | 64.7 |
| Msa1387030 | AT5G06500.1 | 26.667 | 150 | 109 | 1 | 6 | 155 | 3 | 151 | 2.16e-11 | 64.7 |
| Msa1387030 | AT5G27810.1 | 29.670 | 91 | 64 | 0 | 34 | 124 | 3 | 93 | 5.58e-11 | 60.5 |
Find 97 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGACAATATGGTAGATTT+TGG | 0.154646 | tig0020873:-93315 | Msa1387030:CDS |
| ATGCCTCCTCAAGGCGATTT+TGG | 0.215144 | tig0020873:-92922 | Msa1387030:CDS |
| ATACCGCCACACACATATTT+TGG | 0.262443 | tig0020873:-93144 | Msa1387030:CDS |
| TTCGTTATATTTGTTGATCT+TGG | 0.266394 | tig0020873:+93545 | None:intergenic |
| GGCAGAGAGGGAGGTTTATT+AGG | 0.266981 | tig0020873:+93363 | None:intergenic |
| TGACCTATTGTTTCGACATT+AGG | 0.272251 | tig0020873:+92604 | None:intergenic |
| CTGACTTATGTGGAGGAAAA+AGG | 0.299572 | tig0020873:-93591 | Msa1387030:CDS |
| AATGGAAGCAACTTCAATTA+AGG | 0.312514 | tig0020873:-92253 | None:intergenic |
| AAACACAAATATGGTAGATT+TGG | 0.314468 | tig0020873:-93289 | Msa1387030:CDS |
| GTTATTCCCTAGAGGAAATT+CGG | 0.319248 | tig0020873:-93019 | Msa1387030:CDS |
| GAAAGGATTGTTCACCAAAA+TGG | 0.348226 | tig0020873:-93775 | Msa1387030:CDS |
| ATTCCTAATGTCGAAACAAT+AGG | 0.349451 | tig0020873:-92607 | Msa1387030:CDS |
| TGCTTTAGACAATGACAATA+TGG | 0.384922 | tig0020873:-93325 | Msa1387030:CDS |
| TTCGTAGCCAAAACAACATT+GGG | 0.385715 | tig0020873:-92333 | Msa1387030:CDS |
| TTATTCCCTAGAGGAAATTC+GGG | 0.398930 | tig0020873:-93018 | Msa1387030:CDS |
| TAACAACACAGATAGCAAAA+TGG | 0.410915 | tig0020873:-92560 | Msa1387030:CDS |
| ACAATAGGTCAAGTAAGCTT+TGG | 0.426113 | tig0020873:-92592 | Msa1387030:CDS |
| CAACGCATCAACATCACTAC+TGG | 0.426637 | tig0020873:+92744 | None:intergenic |
| GGAGGTCAATGCAACTTTGA+AGG | 0.427024 | tig0020873:-92703 | Msa1387030:CDS |
| TTGATGCTTTGCTTCCTCAA+TGG | 0.441644 | tig0020873:-92504 | Msa1387030:CDS |
| TTCGTTTAAAATTTGATGCA+TGG | 0.443888 | tig0020873:+93503 | None:intergenic |
| ACTCATTTGATCAGCTTGCT+TGG | 0.447445 | tig0020873:+93266 | None:intergenic |
| CTTCCTCAATGGAATTTCAC+AGG | 0.455585 | tig0020873:-92493 | Msa1387030:CDS |
| CTCCATGTTGCTACCTAGAT+AGG | 0.463692 | tig0020873:+92984 | None:intergenic |
| ATAGGTCAAGTAAGCTTTGG+AGG | 0.477721 | tig0020873:-92589 | Msa1387030:CDS |
| TTTCATCAAGGCAATGTTGA+AGG | 0.479948 | tig0020873:-92397 | Msa1387030:CDS |
| TTTCTTGATTGTACTGACTC+TGG | 0.484517 | tig0020873:+93627 | None:intergenic |
| ACAGGTTCTGATAACAATGT+AGG | 0.484981 | tig0020873:-92475 | Msa1387030:CDS |
| GTTGATTTGTTATTTCATCA+AGG | 0.487404 | tig0020873:-92409 | Msa1387030:CDS |
| AGAGAGGGAGGTTTATTAGG+AGG | 0.488122 | tig0020873:+93366 | None:intergenic |
| TAAAAGTCATGGTTAAGATC+AGG | 0.490440 | tig0020873:-93866 | None:intergenic |
| CATATCATCAACATTACCAC+TGG | 0.493203 | tig0020873:+93041 | None:intergenic |
| TTTCCTCCACATAAGTCAGT+TGG | 0.504777 | tig0020873:+93595 | None:intergenic |
| ATAGAGATGGTGATAATATG+AGG | 0.515278 | tig0020873:-92357 | Msa1387030:CDS |
| AACATGTCAACACCGCCACT+TGG | 0.520464 | tig0020873:+92631 | None:intergenic |
| TGACGGTGTTGGTGCTATGT+TGG | 0.535172 | tig0020873:-93220 | Msa1387030:CDS |
| GACATCGGCAGTGGCAGAGA+GGG | 0.542637 | tig0020873:+93351 | None:intergenic |
| TCATGGTTAAGATCAGGAAA+AGG | 0.549500 | tig0020873:-93860 | Msa1387030:CDS |
| GTAGCGAATCTTTCTTTGAG+TGG | 0.550195 | tig0020873:+93809 | None:intergenic |
| ATTGTTCACCAAAATGGAGC+AGG | 0.556851 | tig0020873:-93769 | Msa1387030:CDS |
| CGCTACGTGAACAGAGTGAA+AGG | 0.557937 | tig0020873:-93792 | Msa1387030:CDS |
| AATCTTGATGAATATGGCAT+GGG | 0.562864 | tig0020873:-92307 | Msa1387030:CDS |
| ATTCGTAGCCAAAACAACAT+TGG | 0.568395 | tig0020873:-92334 | Msa1387030:CDS |
| CCTAGTGGTGGTGACGGTGT+TGG | 0.572728 | tig0020873:-93231 | Msa1387030:CDS |
| AAATCTTGATGAATATGGCA+TGG | 0.578232 | tig0020873:-92308 | Msa1387030:CDS |
| ATTGTCAACAGAGTTTGCAT+TGG | 0.580353 | tig0020873:+92279 | None:intergenic |
| AACTCTGTTGACAATAACAA+TGG | 0.580414 | tig0020873:-92271 | Msa1387030:CDS |
| CCAACACCGTCACCACCACT+AGG | 0.583076 | tig0020873:+93231 | None:intergenic |
| TCACCTCATGCAAATCATAG+TGG | 0.589731 | tig0020873:-92532 | Msa1387030:CDS |
| AAAGCACATGACATCGGCAG+TGG | 0.598200 | tig0020873:+93342 | None:intergenic |
| ATCGGCAGTGGCAGAGAGGG+AGG | 0.599362 | tig0020873:+93354 | None:intergenic |
| GACGGACCAACTGACTTATG+TGG | 0.599548 | tig0020873:-93601 | Msa1387030:CDS |
| AAAATATTGGAAGCAACATG+TGG | 0.603782 | tig0020873:-92786 | Msa1387030:CDS |
| GTAGATAACATGCCTCCTCA+AGG | 0.611282 | tig0020873:-92931 | Msa1387030:CDS |
| AGTACAATCAAGAAATATGA+CGG | 0.615154 | tig0020873:-93619 | Msa1387030:CDS |
| CAAGCTGATCAAATGAGTGA+TGG | 0.615984 | tig0020873:-93261 | Msa1387030:CDS |
| ACATTACATATCGCAACATG+TGG | 0.617634 | tig0020873:-92672 | Msa1387030:CDS |
| CACATGCTTCAATACCACAC+AGG | 0.617665 | tig0020873:+93739 | None:intergenic |
| GACATGGAGGTATCACTGCA+TGG | 0.617708 | tig0020873:-92448 | Msa1387030:CDS |
| TCATGAGATGGCCACACTGA+GGG | 0.621251 | tig0020873:+93687 | None:intergenic |
| TAACAATATTTACAGCAACA+TGG | 0.622242 | tig0020873:-93169 | Msa1387030:CDS |
| TAACAATGTAGGCAACGACA+TGG | 0.622250 | tig0020873:-92464 | Msa1387030:CDS |
| TTTAATCCTAGTGGTGGTGA+CGG | 0.628750 | tig0020873:-93237 | Msa1387030:CDS |
| CCTCCAAAATCGCCTTGAGG+AGG | 0.629694 | tig0020873:+92919 | None:intergenic |
| GATGATATGTTATTCCCTAG+AGG | 0.633514 | tig0020873:-93027 | Msa1387030:CDS |
| CCTCATGCAAATCATAGTGG+TGG | 0.635594 | tig0020873:-92529 | Msa1387030:CDS |
| GAACCTGTGAAATTCCATTG+AGG | 0.637565 | tig0020873:+92490 | None:intergenic |
| TATATTTGTTGATCTTGGCG+AGG | 0.643058 | tig0020873:+93550 | None:intergenic |
| ACTGAGGGTCTTGAACCACC+TGG | 0.643320 | tig0020873:+93702 | None:intergenic |
| AACGCATCAACATCACTACT+GGG | 0.649454 | tig0020873:+92745 | None:intergenic |
| ACATGCTTCAATACCACACA+GGG | 0.652435 | tig0020873:+93740 | None:intergenic |
| AGTGTGGCCATCTCATGATG+TGG | 0.654651 | tig0020873:-93682 | Msa1387030:CDS |
| TTGTCTAAAGCACATGACAT+CGG | 0.658558 | tig0020873:+93336 | None:intergenic |
| TTCCCTAGAGGAAATTCGGG+GGG | 0.658559 | tig0020873:-93015 | Msa1387030:CDS |
| CGTAGCCAAAACAACATTGG+GGG | 0.666330 | tig0020873:-92331 | Msa1387030:CDS |
| CCACCACCAAAATATGTGTG+TGG | 0.667305 | tig0020873:+93138 | None:intergenic |
| ATCTTGATGAATATGGCATG+GGG | 0.670439 | tig0020873:-92306 | Msa1387030:CDS |
| AAACCTCCAAAATCGCCTTG+AGG | 0.673422 | tig0020873:+92916 | None:intergenic |
| CCACCAAAATATGTGTGTGG+CGG | 0.676512 | tig0020873:+93141 | None:intergenic |
| TGACCTCTAAAACTAAACTG+AGG | 0.679604 | tig0020873:+92832 | None:intergenic |
| TCGTAGCCAAAACAACATTG+GGG | 0.682214 | tig0020873:-92332 | Msa1387030:CDS |
| ATATCATCAACATTACCACT+GGG | 0.687577 | tig0020873:+93042 | None:intergenic |
| TCACATGAAAATCCAAGTGG+CGG | 0.689481 | tig0020873:-92643 | Msa1387030:CDS |
| GGACCAACTGACTTATGTGG+AGG | 0.690646 | tig0020873:-93598 | Msa1387030:CDS |
| CCACCACTATGATTTGCATG+AGG | 0.697525 | tig0020873:+92529 | None:intergenic |
| TACCTATCTAGGTAGCAACA+TGG | 0.698196 | tig0020873:-92986 | Msa1387030:CDS |
| TGACATCGGCAGTGGCAGAG+AGG | 0.703505 | tig0020873:+93350 | None:intergenic |
| ATCATGAGATGGCCACACTG+AGG | 0.712363 | tig0020873:+93686 | None:intergenic |
| TATTCCCTAGAGGAAATTCG+GGG | 0.717198 | tig0020873:-93017 | Msa1387030:CDS |
| ATTCCCTAGAGGAAATTCGG+GGG | 0.724819 | tig0020873:-93016 | Msa1387030:CDS |
| GTGGTTCAAGACCCTCAGTG+TGG | 0.726788 | tig0020873:-93698 | Msa1387030:CDS |
| TCGTCATGACTTACATGCGG+CGG | 0.728724 | tig0020873:+92958 | None:intergenic |
| ACATCGTCATGACTTACATG+CGG | 0.728985 | tig0020873:+92955 | None:intergenic |
| CCATCACATGAAAATCCAAG+TGG | 0.734016 | tig0020873:-92646 | Msa1387030:CDS |
| ACATCAGATAAATATCCCAG+TGG | 0.747137 | tig0020873:-93057 | Msa1387030:CDS |
| CAATGTAGGCAACGACATGG+AGG | 0.748862 | tig0020873:-92461 | Msa1387030:CDS |
| GAGCAGGTGAAAACCCTGTG+TGG | 0.782460 | tig0020873:-93753 | Msa1387030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTTGTATTAGTTTTT+TGG | + | tig0020873:92457-92476 | None:intergenic | 10.0% |
| !!! | AAATTTTTGTATTAGTTTTT+TGG | + | tig0020873:92457-92476 | None:intergenic | 10.0% |
| !!! | GAAAGTTTTGATAAAAATAT+TGG | - | tig0020873:93314-93333 | Msa1387030:CDS | 15.0% |
| !!! | GAAAGTTTTGATAAAAATAT+TGG | - | tig0020873:93314-93333 | Msa1387030:CDS | 15.0% |
| !!! | TTGATTTTTACACAAAATTC+TGG | - | tig0020873:93389-93408 | Msa1387030:CDS | 20.0% |
| !!! | TTGATTTTTACACAAAATTC+TGG | - | tig0020873:93389-93408 | Msa1387030:CDS | 20.0% |
| ! | AGTACAATCAAGAAATATGA+CGG | - | tig0020873:92494-92513 | Msa1387030:CDS | 25.0% |
| !! | TTCGTTATATTTGTTGATCT+TGG | + | tig0020873:92571-92590 | None:intergenic | 25.0% |
| !! | TTCGTTTAAAATTTGATGCA+TGG | + | tig0020873:92613-92632 | None:intergenic | 25.0% |
| !! | ATGCATCAAATTTTAAACGA+AGG | - | tig0020873:92612-92631 | Msa1387030:CDS | 25.0% |
| ! | AGTATGAAAAACAACTTGAT+TGG | - | tig0020873:92660-92679 | Msa1387030:CDS | 25.0% |
| !! | AATGACAATATGGTAGATTT+TGG | - | tig0020873:92798-92817 | Msa1387030:CDS | 25.0% |
| !! | ATGACAATATGGTAGATTTT+GGG | - | tig0020873:92799-92818 | Msa1387030:CDS | 25.0% |
| !!! | TTTTGGGATAAACACAAATA+TGG | - | tig0020873:92815-92834 | Msa1387030:CDS | 25.0% |
| ! | AAACACAAATATGGTAGATT+TGG | - | tig0020873:92824-92843 | Msa1387030:CDS | 25.0% |
| !! | GTTAATCAAGAGAATTTTGA+AGG | - | tig0020873:92915-92934 | Msa1387030:CDS | 25.0% |
| ! | TAACAATATTTACAGCAACA+TGG | - | tig0020873:92944-92963 | Msa1387030:CDS | 25.0% |
| !! | ATTTTTACACAAAATTCTGG+AGG | - | tig0020873:93392-93411 | Msa1387030:CDS | 25.0% |
| !!! | GTTGATTTGTTATTTCATCA+AGG | - | tig0020873:93704-93723 | Msa1387030:CDS | 25.0% |
| ! | GATAACAAAAATCATAGAGA+TGG | - | tig0020873:93743-93762 | Msa1387030:CDS | 25.0% |
| ! | AGTACAATCAAGAAATATGA+CGG | - | tig0020873:92494-92513 | Msa1387030:CDS | 25.0% |
| !! | TTCGTTATATTTGTTGATCT+TGG | + | tig0020873:92571-92590 | None:intergenic | 25.0% |
| !! | TTCGTTTAAAATTTGATGCA+TGG | + | tig0020873:92613-92632 | None:intergenic | 25.0% |
| !! | ATGCATCAAATTTTAAACGA+AGG | - | tig0020873:92612-92631 | Msa1387030:CDS | 25.0% |
| ! | AGTATGAAAAACAACTTGAT+TGG | - | tig0020873:92660-92679 | Msa1387030:CDS | 25.0% |
| !! | AATGACAATATGGTAGATTT+TGG | - | tig0020873:92798-92817 | Msa1387030:CDS | 25.0% |
| !! | ATGACAATATGGTAGATTTT+GGG | - | tig0020873:92799-92818 | Msa1387030:CDS | 25.0% |
| !!! | TTTTGGGATAAACACAAATA+TGG | - | tig0020873:92815-92834 | Msa1387030:CDS | 25.0% |
| ! | AAACACAAATATGGTAGATT+TGG | - | tig0020873:92824-92843 | Msa1387030:CDS | 25.0% |
| !! | GTTAATCAAGAGAATTTTGA+AGG | - | tig0020873:92915-92934 | Msa1387030:CDS | 25.0% |
| ! | TAACAATATTTACAGCAACA+TGG | - | tig0020873:92944-92963 | Msa1387030:CDS | 25.0% |
| !! | ATTTTTACACAAAATTCTGG+AGG | - | tig0020873:93392-93411 | Msa1387030:CDS | 25.0% |
| !!! | GTTGATTTGTTATTTCATCA+AGG | - | tig0020873:93704-93723 | Msa1387030:CDS | 25.0% |
| ! | GATAACAAAAATCATAGAGA+TGG | - | tig0020873:93743-93762 | Msa1387030:CDS | 25.0% |
| !!! | GAGAACCGATTATTTTGAAA+AGG | - | tig0020873:92716-92735 | Msa1387030:CDS | 30.0% |
| ! | CACTGCCTTTTCAAAATAAT+CGG | + | tig0020873:92724-92743 | None:intergenic | 30.0% |
| ! | TGCTTTAGACAATGACAATA+TGG | - | tig0020873:92788-92807 | Msa1387030:CDS | 30.0% |
| ATATCATCAACATTACCACT+GGG | + | tig0020873:93074-93093 | None:intergenic | 30.0% | |
| ! | GAGGTTTTTATCATAACATG+TGG | - | tig0020873:93213-93232 | Msa1387030:CDS | 30.0% |
| ! | TTGCTACTAGAATTTTCATG+TGG | + | tig0020873:93245-93264 | None:intergenic | 30.0% |
| !!! | TTTCCTCAGTTTAGTTTTAG+AGG | - | tig0020873:93278-93297 | Msa1387030:CDS | 30.0% |
| AAAATATTGGAAGCAACATG+TGG | - | tig0020873:93327-93346 | Msa1387030:CDS | 30.0% | |
| ATTCCTAATGTCGAAACAAT+AGG | - | tig0020873:93506-93525 | Msa1387030:CDS | 30.0% | |
| TAACAACACAGATAGCAAAA+TGG | - | tig0020873:93553-93572 | Msa1387030:CDS | 30.0% | |
| ATAGAGATGGTGATAATATG+AGG | - | tig0020873:93756-93775 | Msa1387030:CDS | 30.0% | |
| AAATCTTGATGAATATGGCA+TGG | - | tig0020873:93805-93824 | Msa1387030:CDS | 30.0% | |
| AATCTTGATGAATATGGCAT+GGG | - | tig0020873:93806-93825 | Msa1387030:CDS | 30.0% | |
| AACTCTGTTGACAATAACAA+TGG | - | tig0020873:93842-93861 | Msa1387030:CDS | 30.0% | |
| !!! | GAGAACCGATTATTTTGAAA+AGG | - | tig0020873:92716-92735 | Msa1387030:CDS | 30.0% |
| ! | CACTGCCTTTTCAAAATAAT+CGG | + | tig0020873:92724-92743 | None:intergenic | 30.0% |
| ! | TGCTTTAGACAATGACAATA+TGG | - | tig0020873:92788-92807 | Msa1387030:CDS | 30.0% |
| ATATCATCAACATTACCACT+GGG | + | tig0020873:93074-93093 | None:intergenic | 30.0% | |
| ! | GAGGTTTTTATCATAACATG+TGG | - | tig0020873:93213-93232 | Msa1387030:CDS | 30.0% |
| ! | TTGCTACTAGAATTTTCATG+TGG | + | tig0020873:93245-93264 | None:intergenic | 30.0% |
| !!! | TTTCCTCAGTTTAGTTTTAG+AGG | - | tig0020873:93278-93297 | Msa1387030:CDS | 30.0% |
| AAAATATTGGAAGCAACATG+TGG | - | tig0020873:93327-93346 | Msa1387030:CDS | 30.0% | |
| ATTCCTAATGTCGAAACAAT+AGG | - | tig0020873:93506-93525 | Msa1387030:CDS | 30.0% | |
| TAACAACACAGATAGCAAAA+TGG | - | tig0020873:93553-93572 | Msa1387030:CDS | 30.0% | |
| ATAGAGATGGTGATAATATG+AGG | - | tig0020873:93756-93775 | Msa1387030:CDS | 30.0% | |
| AAATCTTGATGAATATGGCA+TGG | - | tig0020873:93805-93824 | Msa1387030:CDS | 30.0% | |
| AATCTTGATGAATATGGCAT+GGG | - | tig0020873:93806-93825 | Msa1387030:CDS | 30.0% | |
| AACTCTGTTGACAATAACAA+TGG | - | tig0020873:93842-93861 | Msa1387030:CDS | 30.0% | |
| ! | AGTGGCATTTTCAATCAACT+TGG | + | tig0020873:92289-92308 | None:intergenic | 35.0% |
| GAAAGGATTGTTCACCAAAA+TGG | - | tig0020873:92338-92357 | Msa1387030:CDS | 35.0% | |
| !!! | GAAGCATGTGCAGTTTTATT+TGG | - | tig0020873:92387-92406 | Msa1387030:CDS | 35.0% |
| !! | TTTCTTGATTGTACTGACTC+TGG | + | tig0020873:92489-92508 | None:intergenic | 35.0% |
| ! | TATATTTGTTGATCTTGGCG+AGG | + | tig0020873:92566-92585 | None:intergenic | 35.0% |
| ! | TTGTCTAAAGCACATGACAT+CGG | + | tig0020873:92780-92799 | None:intergenic | 35.0% |
| !!! | AGTGATGGTTTTAATCCTAG+TGG | - | tig0020873:92867-92886 | Msa1387030:CDS | 35.0% |
| ! | GTTGATGTGGAATTTTCTCA+AGG | - | tig0020873:92999-93018 | Msa1387030:CDS | 35.0% |
| ! | GGAATTTTCTCAAGGCAATA+TGG | - | tig0020873:93007-93026 | Msa1387030:CDS | 35.0% |
| !! | GGAAGATTTTGATAGTAGCA+TGG | - | tig0020873:93028-93047 | Msa1387030:CDS | 35.0% |
| ACATCAGATAAATATCCCAG+TGG | - | tig0020873:93056-93075 | Msa1387030:CDS | 35.0% | |
| CATATCATCAACATTACCAC+TGG | + | tig0020873:93075-93094 | None:intergenic | 35.0% | |
| GATGATATGTTATTCCCTAG+AGG | - | tig0020873:93086-93105 | Msa1387030:CDS | 35.0% | |
| GTTATTCCCTAGAGGAAATT+CGG | - | tig0020873:93094-93113 | Msa1387030:CDS | 35.0% | |
| TTATTCCCTAGAGGAAATTC+GGG | - | tig0020873:93095-93114 | Msa1387030:CDS | 35.0% | |
| ! | CTACTAGAATTTTCATGTGG+TGG | + | tig0020873:93242-93261 | None:intergenic | 35.0% |
| !! | TGACCTCTAAAACTAAACTG+AGG | + | tig0020873:93284-93303 | None:intergenic | 35.0% |
| ACATTACATATCGCAACATG+TGG | - | tig0020873:93441-93460 | Msa1387030:CDS | 35.0% | |
| TGACCTATTGTTTCGACATT+AGG | + | tig0020873:93512-93531 | None:intergenic | 35.0% | |
| ACAATAGGTCAAGTAAGCTT+TGG | - | tig0020873:93521-93540 | Msa1387030:CDS | 35.0% | |
| ! | ACAGGTTCTGATAACAATGT+AGG | - | tig0020873:93638-93657 | Msa1387030:CDS | 35.0% |
| TTTCATCAAGGCAATGTTGA+AGG | - | tig0020873:93716-93735 | Msa1387030:CDS | 35.0% | |
| ATTCGTAGCCAAAACAACAT+TGG | - | tig0020873:93779-93798 | Msa1387030:CDS | 35.0% | |
| TTCGTAGCCAAAACAACATT+GGG | - | tig0020873:93780-93799 | Msa1387030:CDS | 35.0% | |
| ATCTTGATGAATATGGCATG+GGG | - | tig0020873:93807-93826 | Msa1387030:CDS | 35.0% | |
| ATTGTCAACAGAGTTTGCAT+TGG | + | tig0020873:93837-93856 | None:intergenic | 35.0% | |
| ! | AGTGGCATTTTCAATCAACT+TGG | + | tig0020873:92289-92308 | None:intergenic | 35.0% |
| GAAAGGATTGTTCACCAAAA+TGG | - | tig0020873:92338-92357 | Msa1387030:CDS | 35.0% | |
| !!! | GAAGCATGTGCAGTTTTATT+TGG | - | tig0020873:92387-92406 | Msa1387030:CDS | 35.0% |
| !! | TTTCTTGATTGTACTGACTC+TGG | + | tig0020873:92489-92508 | None:intergenic | 35.0% |
| ! | TATATTTGTTGATCTTGGCG+AGG | + | tig0020873:92566-92585 | None:intergenic | 35.0% |
| ! | TTGTCTAAAGCACATGACAT+CGG | + | tig0020873:92780-92799 | None:intergenic | 35.0% |
| !!! | AGTGATGGTTTTAATCCTAG+TGG | - | tig0020873:92867-92886 | Msa1387030:CDS | 35.0% |
| ! | GTTGATGTGGAATTTTCTCA+AGG | - | tig0020873:92999-93018 | Msa1387030:CDS | 35.0% |
| ! | GGAATTTTCTCAAGGCAATA+TGG | - | tig0020873:93007-93026 | Msa1387030:CDS | 35.0% |
| !! | GGAAGATTTTGATAGTAGCA+TGG | - | tig0020873:93028-93047 | Msa1387030:CDS | 35.0% |
| ACATCAGATAAATATCCCAG+TGG | - | tig0020873:93056-93075 | Msa1387030:CDS | 35.0% | |
| CATATCATCAACATTACCAC+TGG | + | tig0020873:93075-93094 | None:intergenic | 35.0% | |
| GATGATATGTTATTCCCTAG+AGG | - | tig0020873:93086-93105 | Msa1387030:CDS | 35.0% | |
| GTTATTCCCTAGAGGAAATT+CGG | - | tig0020873:93094-93113 | Msa1387030:CDS | 35.0% | |
| TTATTCCCTAGAGGAAATTC+GGG | - | tig0020873:93095-93114 | Msa1387030:CDS | 35.0% | |
| ! | CTACTAGAATTTTCATGTGG+TGG | + | tig0020873:93242-93261 | None:intergenic | 35.0% |
| !! | TGACCTCTAAAACTAAACTG+AGG | + | tig0020873:93284-93303 | None:intergenic | 35.0% |
| ACATTACATATCGCAACATG+TGG | - | tig0020873:93441-93460 | Msa1387030:CDS | 35.0% | |
| TGACCTATTGTTTCGACATT+AGG | + | tig0020873:93512-93531 | None:intergenic | 35.0% | |
| ACAATAGGTCAAGTAAGCTT+TGG | - | tig0020873:93521-93540 | Msa1387030:CDS | 35.0% | |
| ! | ACAGGTTCTGATAACAATGT+AGG | - | tig0020873:93638-93657 | Msa1387030:CDS | 35.0% |
| TTTCATCAAGGCAATGTTGA+AGG | - | tig0020873:93716-93735 | Msa1387030:CDS | 35.0% | |
| ATTCGTAGCCAAAACAACAT+TGG | - | tig0020873:93779-93798 | Msa1387030:CDS | 35.0% | |
| TTCGTAGCCAAAACAACATT+GGG | - | tig0020873:93780-93799 | Msa1387030:CDS | 35.0% | |
| ATCTTGATGAATATGGCATG+GGG | - | tig0020873:93807-93826 | Msa1387030:CDS | 35.0% | |
| ATTGTCAACAGAGTTTGCAT+TGG | + | tig0020873:93837-93856 | None:intergenic | 35.0% | |
| GTAGCGAATCTTTCTTTGAG+TGG | + | tig0020873:92307-92326 | None:intergenic | 40.0% | |
| ATTGTTCACCAAAATGGAGC+AGG | - | tig0020873:92344-92363 | Msa1387030:CDS | 40.0% | |
| ACATGCTTCAATACCACACA+GGG | + | tig0020873:92376-92395 | None:intergenic | 40.0% | |
| !!! | TGTGCAGTTTTATTTGGTCC+AGG | - | tig0020873:92393-92412 | Msa1387030:CDS | 40.0% |
| !! | TTTTTGGCCACATCATGAGA+TGG | + | tig0020873:92441-92460 | None:intergenic | 40.0% |
| TTTCCTCCACATAAGTCAGT+TGG | + | tig0020873:92521-92540 | None:intergenic | 40.0% | |
| CTGACTTATGTGGAGGAAAA+AGG | - | tig0020873:92522-92541 | Msa1387030:CDS | 40.0% | |
| ! | ACTCATTTGATCAGCTTGCT+TGG | + | tig0020873:92850-92869 | None:intergenic | 40.0% |
| CAAGCTGATCAAATGAGTGA+TGG | - | tig0020873:92852-92871 | Msa1387030:CDS | 40.0% | |
| !!! | GATGGTTTTAATCCTAGTGG+TGG | - | tig0020873:92870-92889 | Msa1387030:CDS | 40.0% |
| ! | TTTAATCCTAGTGGTGGTGA+CGG | - | tig0020873:92876-92895 | Msa1387030:CDS | 40.0% |
| ! | ATACCGCCACACACATATTT+TGG | - | tig0020873:92969-92988 | Msa1387030:CDS | 40.0% |
| TATTCCCTAGAGGAAATTCG+GGG | - | tig0020873:93096-93115 | Msa1387030:CDS | 40.0% | |
| TACCTATCTAGGTAGCAACA+TGG | - | tig0020873:93127-93146 | Msa1387030:CDS | 40.0% | |
| ACATCGTCATGACTTACATG+CGG | + | tig0020873:93161-93180 | None:intergenic | 40.0% | |
| ! | CTACTGGGATTTTCATGTGA+TGG | + | tig0020873:93356-93375 | None:intergenic | 40.0% |
| AACGCATCAACATCACTACT+GGG | + | tig0020873:93371-93390 | None:intergenic | 40.0% | |
| ! | CCACTTGGATTTTCATGTGA+TGG | + | tig0020873:93470-93489 | None:intergenic | 40.0% |
| CCATCACATGAAAATCCAAG+TGG | - | tig0020873:93467-93486 | Msa1387030:CDS | 40.0% | |
| TCACATGAAAATCCAAGTGG+CGG | - | tig0020873:93470-93489 | Msa1387030:CDS | 40.0% | |
| ! | ATAGGTCAAGTAAGCTTTGG+AGG | - | tig0020873:93524-93543 | Msa1387030:CDS | 40.0% |
| TCACCTCATGCAAATCATAG+TGG | - | tig0020873:93581-93600 | Msa1387030:CDS | 40.0% | |
| TTGATGCTTTGCTTCCTCAA+TGG | - | tig0020873:93609-93628 | Msa1387030:CDS | 40.0% | |
| CTTCCTCAATGGAATTTCAC+AGG | - | tig0020873:93620-93639 | Msa1387030:CDS | 40.0% | |
| GAACCTGTGAAATTCCATTG+AGG | + | tig0020873:93626-93645 | None:intergenic | 40.0% | |
| TAACAATGTAGGCAACGACA+TGG | - | tig0020873:93649-93668 | Msa1387030:CDS | 40.0% | |
| TCGTAGCCAAAACAACATTG+GGG | - | tig0020873:93781-93800 | Msa1387030:CDS | 40.0% | |
| !! | GATTTCCCCCAATGTTGTTT+TGG | + | tig0020873:93790-93809 | None:intergenic | 40.0% |
| GGGGGAAATCTTGATGAATA+TGG | - | tig0020873:93800-93819 | Msa1387030:CDS | 40.0% | |
| GTAGCGAATCTTTCTTTGAG+TGG | + | tig0020873:92307-92326 | None:intergenic | 40.0% | |
| ATTGTTCACCAAAATGGAGC+AGG | - | tig0020873:92344-92363 | Msa1387030:CDS | 40.0% | |
| ACATGCTTCAATACCACACA+GGG | + | tig0020873:92376-92395 | None:intergenic | 40.0% | |
| !!! | TGTGCAGTTTTATTTGGTCC+AGG | - | tig0020873:92393-92412 | Msa1387030:CDS | 40.0% |
| !! | TTTTTGGCCACATCATGAGA+TGG | + | tig0020873:92441-92460 | None:intergenic | 40.0% |
| TTTCCTCCACATAAGTCAGT+TGG | + | tig0020873:92521-92540 | None:intergenic | 40.0% | |
| CTGACTTATGTGGAGGAAAA+AGG | - | tig0020873:92522-92541 | Msa1387030:CDS | 40.0% | |
| ! | ACTCATTTGATCAGCTTGCT+TGG | + | tig0020873:92850-92869 | None:intergenic | 40.0% |
| CAAGCTGATCAAATGAGTGA+TGG | - | tig0020873:92852-92871 | Msa1387030:CDS | 40.0% | |
| !!! | GATGGTTTTAATCCTAGTGG+TGG | - | tig0020873:92870-92889 | Msa1387030:CDS | 40.0% |
| ! | TTTAATCCTAGTGGTGGTGA+CGG | - | tig0020873:92876-92895 | Msa1387030:CDS | 40.0% |
| ! | ATACCGCCACACACATATTT+TGG | - | tig0020873:92969-92988 | Msa1387030:CDS | 40.0% |
| TATTCCCTAGAGGAAATTCG+GGG | - | tig0020873:93096-93115 | Msa1387030:CDS | 40.0% | |
| TACCTATCTAGGTAGCAACA+TGG | - | tig0020873:93127-93146 | Msa1387030:CDS | 40.0% | |
| ACATCGTCATGACTTACATG+CGG | + | tig0020873:93161-93180 | None:intergenic | 40.0% | |
| ! | CTACTGGGATTTTCATGTGA+TGG | + | tig0020873:93356-93375 | None:intergenic | 40.0% |
| AACGCATCAACATCACTACT+GGG | + | tig0020873:93371-93390 | None:intergenic | 40.0% | |
| ! | CCACTTGGATTTTCATGTGA+TGG | + | tig0020873:93470-93489 | None:intergenic | 40.0% |
| CCATCACATGAAAATCCAAG+TGG | - | tig0020873:93467-93486 | Msa1387030:CDS | 40.0% | |
| TCACATGAAAATCCAAGTGG+CGG | - | tig0020873:93470-93489 | Msa1387030:CDS | 40.0% | |
| ! | ATAGGTCAAGTAAGCTTTGG+AGG | - | tig0020873:93524-93543 | Msa1387030:CDS | 40.0% |
| TCACCTCATGCAAATCATAG+TGG | - | tig0020873:93581-93600 | Msa1387030:CDS | 40.0% | |
| TTGATGCTTTGCTTCCTCAA+TGG | - | tig0020873:93609-93628 | Msa1387030:CDS | 40.0% | |
| CTTCCTCAATGGAATTTCAC+AGG | - | tig0020873:93620-93639 | Msa1387030:CDS | 40.0% | |
| GAACCTGTGAAATTCCATTG+AGG | + | tig0020873:93626-93645 | None:intergenic | 40.0% | |
| TAACAATGTAGGCAACGACA+TGG | - | tig0020873:93649-93668 | Msa1387030:CDS | 40.0% | |
| TCGTAGCCAAAACAACATTG+GGG | - | tig0020873:93781-93800 | Msa1387030:CDS | 40.0% | |
| !! | GATTTCCCCCAATGTTGTTT+TGG | + | tig0020873:93790-93809 | None:intergenic | 40.0% |
| GGGGGAAATCTTGATGAATA+TGG | - | tig0020873:93800-93819 | Msa1387030:CDS | 40.0% | |
| ! | GGTTTTCACCTGCTCCATTT+TGG | + | tig0020873:92355-92374 | None:intergenic | 45.0% |
| CACATGCTTCAATACCACAC+AGG | + | tig0020873:92377-92396 | None:intergenic | 45.0% | |
| !!! | GCAGTTTTATTTGGTCCAGG+TGG | - | tig0020873:92396-92415 | Msa1387030:CDS | 45.0% |
| AGAGAGGGAGGTTTATTAGG+AGG | + | tig0020873:92750-92769 | None:intergenic | 45.0% | |
| CCACCAAAATATGTGTGTGG+CGG | + | tig0020873:92975-92994 | None:intergenic | 45.0% | |
| CCACCACCAAAATATGTGTG+TGG | + | tig0020873:92978-92997 | None:intergenic | 45.0% | |
| !!! | CCACACACATATTTTGGTGG+TGG | - | tig0020873:92975-92994 | Msa1387030:CDS | 45.0% |
| !!! | TTTTGGTGGTGGTGTTGATG+TGG | - | tig0020873:92986-93005 | Msa1387030:CDS | 45.0% |
| ATTCCCTAGAGGAAATTCGG+GGG | - | tig0020873:93097-93116 | Msa1387030:CDS | 45.0% | |
| ! | GGGGGTTCTAATACCTATCT+AGG | - | tig0020873:93116-93135 | Msa1387030:CDS | 45.0% |
| CTCCATGTTGCTACCTAGAT+AGG | + | tig0020873:93132-93151 | None:intergenic | 45.0% | |
| GTAGATAACATGCCTCCTCA+AGG | - | tig0020873:93182-93201 | Msa1387030:CDS | 45.0% | |
| AAACCTCCAAAATCGCCTTG+AGG | + | tig0020873:93200-93219 | None:intergenic | 45.0% | |
| CAACGCATCAACATCACTAC+TGG | + | tig0020873:93372-93391 | None:intergenic | 45.0% | |
| GGAGGTCAATGCAACTTTGA+AGG | - | tig0020873:93410-93429 | Msa1387030:CDS | 45.0% | |
| ! | CCACCACTATGATTTGCATG+AGG | + | tig0020873:93587-93606 | None:intergenic | 45.0% |
| CCTCATGCAAATCATAGTGG+TGG | - | tig0020873:93584-93603 | Msa1387030:CDS | 45.0% | |
| CGTAGCCAAAACAACATTGG+GGG | - | tig0020873:93782-93801 | Msa1387030:CDS | 45.0% | |
| ! | GGTTTTCACCTGCTCCATTT+TGG | + | tig0020873:92355-92374 | None:intergenic | 45.0% |
| CACATGCTTCAATACCACAC+AGG | + | tig0020873:92377-92396 | None:intergenic | 45.0% | |
| !!! | GCAGTTTTATTTGGTCCAGG+TGG | - | tig0020873:92396-92415 | Msa1387030:CDS | 45.0% |
| AGAGAGGGAGGTTTATTAGG+AGG | + | tig0020873:92750-92769 | None:intergenic | 45.0% | |
| CCACCAAAATATGTGTGTGG+CGG | + | tig0020873:92975-92994 | None:intergenic | 45.0% | |
| CCACCACCAAAATATGTGTG+TGG | + | tig0020873:92978-92997 | None:intergenic | 45.0% | |
| !!! | CCACACACATATTTTGGTGG+TGG | - | tig0020873:92975-92994 | Msa1387030:CDS | 45.0% |
| !!! | TTTTGGTGGTGGTGTTGATG+TGG | - | tig0020873:92986-93005 | Msa1387030:CDS | 45.0% |
| ATTCCCTAGAGGAAATTCGG+GGG | - | tig0020873:93097-93116 | Msa1387030:CDS | 45.0% | |
| ! | GGGGGTTCTAATACCTATCT+AGG | - | tig0020873:93116-93135 | Msa1387030:CDS | 45.0% |
| CTCCATGTTGCTACCTAGAT+AGG | + | tig0020873:93132-93151 | None:intergenic | 45.0% | |
| GTAGATAACATGCCTCCTCA+AGG | - | tig0020873:93182-93201 | Msa1387030:CDS | 45.0% | |
| AAACCTCCAAAATCGCCTTG+AGG | + | tig0020873:93200-93219 | None:intergenic | 45.0% | |
| CAACGCATCAACATCACTAC+TGG | + | tig0020873:93372-93391 | None:intergenic | 45.0% | |
| GGAGGTCAATGCAACTTTGA+AGG | - | tig0020873:93410-93429 | Msa1387030:CDS | 45.0% | |
| ! | CCACCACTATGATTTGCATG+AGG | + | tig0020873:93587-93606 | None:intergenic | 45.0% |
| CCTCATGCAAATCATAGTGG+TGG | - | tig0020873:93584-93603 | Msa1387030:CDS | 45.0% | |
| CGTAGCCAAAACAACATTGG+GGG | - | tig0020873:93782-93801 | Msa1387030:CDS | 45.0% | |
| CGCTACGTGAACAGAGTGAA+AGG | - | tig0020873:92321-92340 | Msa1387030:CDS | 50.0% | |
| TCATGAGATGGCCACACTGA+GGG | + | tig0020873:92429-92448 | None:intergenic | 50.0% | |
| ATCATGAGATGGCCACACTG+AGG | + | tig0020873:92430-92449 | None:intergenic | 50.0% | |
| AGTGTGGCCATCTCATGATG+TGG | - | tig0020873:92431-92450 | Msa1387030:CDS | 50.0% | |
| ! | GACGGACCAACTGACTTATG+TGG | - | tig0020873:92512-92531 | Msa1387030:CDS | 50.0% |
| ! | GGACCAACTGACTTATGTGG+AGG | - | tig0020873:92515-92534 | Msa1387030:CDS | 50.0% |
| GGCAGAGAGGGAGGTTTATT+AGG | + | tig0020873:92753-92772 | None:intergenic | 50.0% | |
| AAAGCACATGACATCGGCAG+TGG | + | tig0020873:92774-92793 | None:intergenic | 50.0% | |
| !! | TGACGGTGTTGGTGCTATGT+TGG | - | tig0020873:92893-92912 | Msa1387030:CDS | 50.0% |
| !! | CCGCCACACACATATTTTGG+TGG | - | tig0020873:92972-92991 | Msa1387030:CDS | 50.0% |
| TTCCCTAGAGGAAATTCGGG+GGG | - | tig0020873:93098-93117 | Msa1387030:CDS | 50.0% | |
| AACCCCCCGAATTTCCTCTA+GGG | + | tig0020873:93103-93122 | None:intergenic | 50.0% | |
| TCGTCATGACTTACATGCGG+CGG | + | tig0020873:93158-93177 | None:intergenic | 50.0% | |
| ! | ATGCCTCCTCAAGGCGATTT+TGG | - | tig0020873:93191-93210 | Msa1387030:CDS | 50.0% |
| AACATGTCAACACCGCCACT+TGG | + | tig0020873:93485-93504 | None:intergenic | 50.0% | |
| CAATGTAGGCAACGACATGG+AGG | - | tig0020873:93652-93671 | Msa1387030:CDS | 50.0% | |
| !! | GACATGGAGGTATCACTGCA+TGG | - | tig0020873:93665-93684 | Msa1387030:CDS | 50.0% |
| CGCTACGTGAACAGAGTGAA+AGG | - | tig0020873:92321-92340 | Msa1387030:CDS | 50.0% | |
| TCATGAGATGGCCACACTGA+GGG | + | tig0020873:92429-92448 | None:intergenic | 50.0% | |
| ATCATGAGATGGCCACACTG+AGG | + | tig0020873:92430-92449 | None:intergenic | 50.0% | |
| AGTGTGGCCATCTCATGATG+TGG | - | tig0020873:92431-92450 | Msa1387030:CDS | 50.0% | |
| ! | GACGGACCAACTGACTTATG+TGG | - | tig0020873:92512-92531 | Msa1387030:CDS | 50.0% |
| ! | GGACCAACTGACTTATGTGG+AGG | - | tig0020873:92515-92534 | Msa1387030:CDS | 50.0% |
| GGCAGAGAGGGAGGTTTATT+AGG | + | tig0020873:92753-92772 | None:intergenic | 50.0% | |
| AAAGCACATGACATCGGCAG+TGG | + | tig0020873:92774-92793 | None:intergenic | 50.0% | |
| !! | TGACGGTGTTGGTGCTATGT+TGG | - | tig0020873:92893-92912 | Msa1387030:CDS | 50.0% |
| !! | CCGCCACACACATATTTTGG+TGG | - | tig0020873:92972-92991 | Msa1387030:CDS | 50.0% |
| TTCCCTAGAGGAAATTCGGG+GGG | - | tig0020873:93098-93117 | Msa1387030:CDS | 50.0% | |
| AACCCCCCGAATTTCCTCTA+GGG | + | tig0020873:93103-93122 | None:intergenic | 50.0% | |
| TCGTCATGACTTACATGCGG+CGG | + | tig0020873:93158-93177 | None:intergenic | 50.0% | |
| ! | ATGCCTCCTCAAGGCGATTT+TGG | - | tig0020873:93191-93210 | Msa1387030:CDS | 50.0% |
| AACATGTCAACACCGCCACT+TGG | + | tig0020873:93485-93504 | None:intergenic | 50.0% | |
| CAATGTAGGCAACGACATGG+AGG | - | tig0020873:93652-93671 | Msa1387030:CDS | 50.0% | |
| !! | GACATGGAGGTATCACTGCA+TGG | - | tig0020873:93665-93684 | Msa1387030:CDS | 50.0% |
| GAGCAGGTGAAAACCCTGTG+TGG | - | tig0020873:92360-92379 | Msa1387030:CDS | 55.0% | |
| ACTGAGGGTCTTGAACCACC+TGG | + | tig0020873:92414-92433 | None:intergenic | 55.0% | |
| GTGGTTCAAGACCCTCAGTG+TGG | - | tig0020873:92415-92434 | Msa1387030:CDS | 55.0% | |
| GAACCCCCCGAATTTCCTCT+AGG | + | tig0020873:93104-93123 | None:intergenic | 55.0% | |
| CCTCCAAAATCGCCTTGAGG+AGG | + | tig0020873:93197-93216 | None:intergenic | 55.0% | |
| ! | CCTCCTCAAGGCGATTTTGG+AGG | - | tig0020873:93194-93213 | Msa1387030:CDS | 55.0% |
| GAGCAGGTGAAAACCCTGTG+TGG | - | tig0020873:92360-92379 | Msa1387030:CDS | 55.0% | |
| ACTGAGGGTCTTGAACCACC+TGG | + | tig0020873:92414-92433 | None:intergenic | 55.0% | |
| GTGGTTCAAGACCCTCAGTG+TGG | - | tig0020873:92415-92434 | Msa1387030:CDS | 55.0% | |
| GAACCCCCCGAATTTCCTCT+AGG | + | tig0020873:93104-93123 | None:intergenic | 55.0% | |
| CCTCCAAAATCGCCTTGAGG+AGG | + | tig0020873:93197-93216 | None:intergenic | 55.0% | |
| ! | CCTCCTCAAGGCGATTTTGG+AGG | - | tig0020873:93194-93213 | Msa1387030:CDS | 55.0% |
| GACATCGGCAGTGGCAGAGA+GGG | + | tig0020873:92765-92784 | None:intergenic | 60.0% | |
| TGACATCGGCAGTGGCAGAG+AGG | + | tig0020873:92766-92785 | None:intergenic | 60.0% | |
| CCAACACCGTCACCACCACT+AGG | + | tig0020873:92885-92904 | None:intergenic | 60.0% | |
| !! | CCTAGTGGTGGTGACGGTGT+TGG | - | tig0020873:92882-92901 | Msa1387030:CDS | 60.0% |
| GACATCGGCAGTGGCAGAGA+GGG | + | tig0020873:92765-92784 | None:intergenic | 60.0% | |
| TGACATCGGCAGTGGCAGAG+AGG | + | tig0020873:92766-92785 | None:intergenic | 60.0% | |
| CCAACACCGTCACCACCACT+AGG | + | tig0020873:92885-92904 | None:intergenic | 60.0% | |
| !! | CCTAGTGGTGGTGACGGTGT+TGG | - | tig0020873:92882-92901 | Msa1387030:CDS | 60.0% |
| ATCGGCAGTGGCAGAGAGGG+AGG | + | tig0020873:92762-92781 | None:intergenic | 65.0% | |
| ATCGGCAGTGGCAGAGAGGG+AGG | + | tig0020873:92762-92781 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020873 | gene | 92255 | 93880 | 92255 | ID=Msa1387030;Name=Msa1387030 |
| tig0020873 | mRNA | 92255 | 93880 | 92255 | ID=Msa1387030-mRNA-1;Parent=Msa1387030;Name=Msa1387030-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|541 |
| tig0020873 | exon | 92255 | 93880 | 92255 | ID=Msa1387030-mRNA-1:exon:10424;Parent=Msa1387030-mRNA-1 |
| tig0020873 | CDS | 92255 | 93880 | 92255 | ID=Msa1387030-mRNA-1:cds;Parent=Msa1387030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
