AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1387330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1387330 MtrunA17_Chr3g0102571 78.723 94 11 1 1 85 238 331 3.82e-47 154
Msa1387330 MtrunA17_Chr3g0102601 68.085 94 21 1 1 85 76 169 7.30e-38 126
Msa1387330 MtrunA17_Chr3g0141871 64.211 95 24 2 1 85 190 284 4.66e-35 122
Msa1387330 MtrunA17_Chr8g0378831 61.053 95 27 2 1 85 190 284 1.77e-30 110
Msa1387330 MtrunA17_Chr3g0102581 62.963 81 20 2 15 85 114 194 7.71e-25 92.4
Msa1387330 MtrunA17_Chr4g0030151 49.412 85 33 2 1 75 196 280 2.17e-23 91.3
Msa1387330 MtrunA17_Chr4g0030231 45.745 94 41 2 1 84 197 290 5.71e-23 90.1
Msa1387330 MtrunA17_Chr7g0248461 46.237 93 40 2 1 83 195 287 1.10e-22 89.4
Msa1387330 MtrunA17_Chr4g0045841 43.011 93 44 1 1 84 212 304 1.27e-21 86.7
Msa1387330 MtrunA17_Chr5g0397261 45.882 85 36 2 1 75 198 282 1.09e-20 84.0
Msa1387330 MtrunA17_Chr8g0348481 39.785 93 46 2 1 83 194 286 3.27e-20 82.4
Msa1387330 MtrunA17_Chr4g0030241 50.000 80 30 2 1 70 58 137 4.83e-20 79.0
Msa1387330 MtrunA17_Chr8g0387401 40.860 93 45 2 1 83 209 301 2.24e-19 80.1
Msa1387330 MtrunA17_Chr3g0096631 38.298 94 47 3 2 84 187 280 8.30e-17 73.2
Msa1387330 MtrunA17_Chr5g0443351 38.298 94 47 3 2 84 184 277 2.72e-16 72.0
Msa1387330 MtrunA17_Chr6g0482681 36.170 94 49 3 2 84 251 344 6.09e-16 70.9
Msa1387330 MtrunA17_Chr8g0392811 36.170 94 49 3 2 84 279 372 1.29e-15 70.1
Msa1387330 MtrunA17_Chr2g0287271 36.170 94 49 3 2 84 187 280 1.66e-15 69.7
Msa1387330 MtrunA17_Chr4g0065851 36.905 84 42 3 2 74 187 270 1.86e-14 66.6
Msa1387330 MtrunA17_Chr8g0359091 47.619 63 23 2 2 54 188 250 6.31e-14 65.1
Msa1387330 MtrunA17_Chr5g0396361 47.761 67 26 1 1 58 297 363 1.21e-13 64.3
Msa1387330 MtrunA17_Chr8g0378871 57.407 54 22 1 33 85 15 68 1.92e-13 61.6
Msa1387330 MtrunA17_Chr8g0390341 47.619 63 24 1 1 54 284 346 6.45e-13 62.4
Msa1387330 MtrunA17_Chr8g0383451 44.776 67 28 1 1 58 155 221 8.22e-13 62.0
Msa1387330 MtrunA17_Chr2g0284091 37.209 86 41 2 4 76 200 285 1.05e-12 61.6
Msa1387330 MtrunA17_Chr6g0486031 43.284 67 29 1 1 58 271 337 1.13e-12 61.6
Msa1387330 MtrunA17_Chr2g0320011 37.209 86 41 2 4 76 248 333 2.36e-12 60.5
Msa1387330 MtrunA17_Chr7g0273601 47.619 63 24 1 1 54 264 326 2.49e-12 60.5
Msa1387330 MtrunA17_Chr2g0317501 43.284 67 29 1 1 58 291 357 2.98e-12 60.5
Msa1387330 MtrunA17_Chr2g0324461 43.284 67 29 1 1 58 298 364 3.00e-12 60.5
Msa1387330 MtrunA17_Chr1g0193081 37.209 86 41 2 4 76 235 320 5.22e-12 59.7
Msa1387330 MtrunA17_Chr2g0286421 43.284 67 29 1 1 58 259 325 6.46e-12 59.3
Msa1387330 MtrunA17_Chr3g0093391 43.077 65 28 1 1 56 194 258 1.17e-11 58.5
Msa1387330 MtrunA17_Chr4g0066691 44.444 63 26 1 1 54 261 323 1.24e-11 58.5
Msa1387330 MtrunA17_Chr4g0040141 41.791 67 30 1 1 58 286 352 1.32e-11 58.5
Msa1387330 MtrunA17_Chr3g0093571 43.077 65 28 1 1 56 196 260 1.55e-11 58.5
Msa1387330 MtrunA17_Chr2g0293491 41.791 67 30 1 1 58 160 226 1.87e-11 57.8
Msa1387330 MtrunA17_Chr3g0122781 45.161 62 25 1 2 54 573 634 1.93e-11 58.2
Msa1387330 MtrunA17_Chr1g0191221 44.444 63 26 1 1 54 279 341 2.15e-11 57.8
Msa1387330 MtrunA17_Chr7g0246591 34.884 86 43 2 4 76 301 386 3.13e-11 57.4
Msa1387330 MtrunA17_Chr6g0453711 44.444 63 26 1 1 54 267 329 3.38e-11 57.4
Msa1387330 MtrunA17_Chr2g0277011 34.884 86 43 2 4 76 250 335 3.39e-11 57.4
Msa1387330 MtrunA17_Chr8g0339221 41.538 65 29 1 2 57 156 220 4.83e-11 57.0
Msa1387330 MtrunA17_Chr7g0270371 34.884 86 43 2 4 76 235 320 4.84e-11 57.0
Msa1387330 MtrunA17_Chr1g0201571 46.269 67 25 2 1 56 283 349 5.04e-11 57.0
Msa1387330 MtrunA17_Chr2g0314321 32.075 106 40 4 2 75 187 292 5.36e-11 57.0
Msa1387330 MtrunA17_Chr3g0131861 46.032 63 25 1 1 54 254 316 8.18e-11 56.2
Msa1387330 MtrunA17_Chr7g0218071 42.857 63 27 1 1 54 277 339 9.32e-11 56.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1387330 AT2G18170.1 63.158 95 25 2 1 85 190 284 1.06e-33 119
Msa1387330 AT1G59580.2 62.105 95 26 2 1 85 190 284 3.40e-33 117
Msa1387330 AT1G59580.1 62.105 95 26 2 1 85 190 284 3.40e-33 117
Msa1387330 AT4G36450.1 60.000 95 28 2 1 85 187 281 3.54e-32 114
Msa1387330 AT1G10210.2 61.053 95 27 2 1 85 190 284 1.17e-31 113
Msa1387330 AT1G10210.3 61.053 95 27 2 1 85 190 284 1.17e-31 113
Msa1387330 AT1G10210.1 61.053 95 27 2 1 85 190 284 1.17e-31 113
Msa1387330 AT3G45640.1 52.941 85 30 2 1 75 195 279 1.61e-23 92.0
Msa1387330 AT4G11330.1 46.237 93 40 2 1 83 200 292 1.52e-22 89.4
Msa1387330 AT1G07880.2 43.617 94 43 2 1 84 190 283 6.47e-22 87.4
Msa1387330 AT2G46070.2 43.011 93 43 2 1 83 198 290 1.90e-21 85.9
Msa1387330 AT2G46070.1 43.011 93 43 2 1 83 198 290 2.66e-21 85.9
Msa1387330 AT2G46070.3 43.011 93 43 2 1 83 232 324 2.85e-21 85.9
Msa1387330 AT4G01370.1 41.935 93 44 2 1 83 200 292 1.23e-20 84.0
Msa1387330 AT2G43790.1 45.238 84 37 1 1 75 220 303 1.02e-19 81.6
Msa1387330 AT1G01560.3 39.785 93 46 2 1 83 197 289 3.85e-19 79.7
Msa1387330 AT3G59790.1 40.860 93 46 1 1 84 217 309 3.95e-19 80.1
Msa1387330 AT1G01560.2 39.785 93 46 2 1 83 197 289 4.41e-19 79.7
Msa1387330 AT2G01450.3 39.362 94 46 3 2 84 178 271 1.60e-16 72.8
Msa1387330 AT2G01450.1 39.362 94 46 3 2 84 178 271 1.60e-16 72.8
Msa1387330 AT2G01450.2 39.362 94 46 3 2 84 178 271 1.60e-16 72.8
Msa1387330 AT2G01450.4 39.362 94 46 3 2 84 178 271 1.60e-16 72.8
Msa1387330 AT2G42880.2 38.298 94 47 3 2 84 187 280 2.52e-16 72.4
Msa1387330 AT1G01560.4 51.667 60 20 1 1 51 197 256 2.72e-16 71.2
Msa1387330 AT1G01560.1 51.667 60 20 1 1 51 197 256 2.72e-16 71.2
Msa1387330 AT2G42880.1 38.298 94 47 3 2 84 187 280 3.18e-16 72.0
Msa1387330 AT1G18150.3 38.298 94 47 3 2 84 266 359 8.18e-16 70.9
Msa1387330 AT1G18150.2 38.298 94 47 3 2 84 266 359 8.18e-16 70.9
Msa1387330 AT1G18150.1 38.298 94 47 3 2 84 266 359 8.18e-16 70.9
Msa1387330 AT1G53510.1 38.298 94 47 3 2 84 187 280 1.02e-15 70.5
Msa1387330 AT3G14720.2 37.234 94 48 3 2 84 187 280 1.35e-15 70.1
Msa1387330 AT3G14720.3 37.234 94 48 3 2 84 187 280 1.35e-15 70.1
Msa1387330 AT5G19010.1 36.170 94 49 3 2 84 187 280 2.36e-15 69.7
Msa1387330 AT3G14720.1 37.234 94 48 3 2 84 187 280 3.20e-15 69.3
Msa1387330 AT1G07880.1 53.333 60 19 1 1 51 190 249 5.06e-15 67.8
Msa1387330 AT1G73670.1 36.170 94 49 3 2 84 252 345 1.06e-14 67.8
Msa1387330 AT3G18040.4 36.905 84 42 3 2 74 294 377 5.75e-14 65.9
Msa1387330 AT3G18040.3 36.905 84 42 3 2 74 294 377 5.76e-14 65.9
Msa1387330 AT3G18040.5 36.905 84 42 3 2 74 180 263 7.75e-14 65.5
Msa1387330 AT3G18040.1 36.905 84 42 3 2 74 185 268 7.75e-14 65.5
Msa1387330 AT3G18040.2 36.905 84 42 3 2 74 97 180 1.13e-13 64.7
Msa1387330 AT5G63370.9 46.774 62 24 1 2 54 325 386 1.94e-13 63.9
Msa1387330 AT5G63370.2 46.774 62 24 1 2 54 325 386 2.21e-13 63.9
Msa1387330 AT5G63370.3 46.774 62 24 1 2 54 325 386 2.21e-13 63.9
Msa1387330 AT5G63370.5 46.774 62 24 1 2 54 459 520 2.26e-13 63.9
Msa1387330 AT5G63370.10 46.774 62 24 1 2 54 459 520 2.26e-13 63.9
Msa1387330 AT5G63370.7 46.774 62 24 1 2 54 459 520 2.46e-13 63.9
Msa1387330 AT5G63370.8 46.774 62 24 1 2 54 459 520 2.46e-13 63.9
Msa1387330 AT5G63370.4 46.774 62 24 1 2 54 459 520 2.46e-13 63.9
Msa1387330 AT5G63370.6 46.774 62 24 1 2 54 459 520 2.46e-13 63.9
Msa1387330 AT5G63370.1 46.774 62 24 1 2 54 459 520 2.46e-13 63.9
Msa1387330 AT1G71530.2 41.860 86 40 2 1 76 304 389 5.30e-13 62.8
Msa1387330 AT1G71530.1 41.860 86 40 2 1 76 304 389 5.65e-13 62.8
Msa1387330 AT1G71530.3 41.860 86 40 2 1 76 304 389 6.39e-13 62.8
Msa1387330 AT1G33770.1 39.535 86 42 2 1 76 298 383 7.18e-13 62.4
Msa1387330 AT4G10010.1 47.761 67 26 1 1 58 133 199 9.91e-13 62.0
Msa1387330 AT4G10010.2 47.761 67 26 1 1 58 313 379 1.12e-12 62.0
Msa1387330 AT1G54610.1 44.776 67 28 1 1 58 275 341 1.12e-12 62.0
Msa1387330 AT1G54610.3 44.776 67 28 1 1 58 275 341 1.12e-12 62.0
Msa1387330 AT1G54610.2 44.776 67 28 1 1 58 275 341 1.12e-12 62.0
Msa1387330 AT5G10270.1 45.588 68 28 1 1 59 197 264 1.62e-12 61.6
Msa1387330 AT4G18710.1 37.209 86 41 2 4 76 200 285 2.00e-12 61.2
Msa1387330 AT4G22940.2 43.284 67 29 1 1 58 261 327 3.79e-12 60.5
Msa1387330 AT4G18710.2 38.889 72 35 1 4 66 194 265 4.16e-12 60.1
Msa1387330 AT4G22940.1 43.284 67 29 1 1 58 261 327 4.27e-12 60.5
Msa1387330 AT5G44290.6 40.449 89 37 3 1 76 294 379 5.16e-12 60.1
Msa1387330 AT5G44290.7 40.449 89 37 3 1 76 294 379 5.34e-12 60.1
Msa1387330 AT5G44290.2 39.535 86 42 2 1 76 294 379 5.48e-12 60.1
Msa1387330 AT5G44290.5 39.535 86 42 2 1 76 294 379 5.48e-12 60.1
Msa1387330 AT5G44290.4 39.535 86 42 2 1 76 294 379 5.48e-12 60.1
Msa1387330 AT5G44290.1 39.535 86 42 2 1 76 294 379 5.48e-12 60.1
Msa1387330 AT5G44290.3 39.535 86 42 2 1 76 294 379 5.48e-12 60.1
Msa1387330 AT1G09600.1 37.209 86 44 2 1 76 320 405 9.24e-12 59.3
Msa1387330 AT1G03740.2 38.372 86 43 2 1 76 370 455 9.32e-12 59.3
Msa1387330 AT1G03740.1 38.372 86 43 2 1 76 370 455 9.44e-12 59.3
Msa1387330 AT2G30980.1 36.047 86 42 2 4 76 232 317 1.00e-11 59.3
Msa1387330 AT4G13020.7 38.202 89 44 2 2 81 156 242 1.27e-11 58.9
Msa1387330 AT4G13020.8 38.202 89 44 2 2 81 165 251 1.28e-11 58.9
Msa1387330 AT5G50860.1 44.444 63 26 1 1 54 271 333 1.52e-11 58.9
Msa1387330 AT1G06390.2 36.047 86 42 2 4 76 230 315 1.57e-11 58.5
Msa1387330 AT1G06390.1 36.047 86 42 2 4 76 230 315 1.57e-11 58.5
Msa1387330 AT5G50860.2 44.444 63 26 1 1 54 271 333 1.61e-11 58.5
Msa1387330 AT1G53050.2 37.209 86 44 2 1 76 291 376 1.81e-11 58.5
Msa1387330 AT1G53050.1 37.209 86 44 2 1 76 291 376 1.81e-11 58.5
Msa1387330 AT4G13020.4 38.202 89 44 2 2 81 156 242 2.11e-11 58.2
Msa1387330 AT4G13020.6 38.202 89 44 2 2 81 156 242 2.11e-11 58.2
Msa1387330 AT4G13020.5 38.202 89 44 2 2 81 165 251 2.72e-11 58.2
Msa1387330 AT4G13020.2 38.202 89 44 2 2 81 164 250 2.77e-11 58.2
Msa1387330 AT4G13020.3 38.202 89 44 2 2 81 164 250 2.77e-11 58.2
Msa1387330 AT1G74330.3 43.284 67 29 1 1 58 280 346 3.11e-11 57.8
Msa1387330 AT4G13020.1 38.202 89 44 2 2 81 156 242 3.11e-11 57.8
Msa1387330 AT3G48750.1 42.424 66 29 1 2 58 161 226 3.21e-11 57.8
Msa1387330 AT1G74330.2 43.284 67 29 1 1 58 280 346 3.31e-11 57.8
Msa1387330 AT1G74330.1 43.284 67 29 1 1 58 280 346 3.45e-11 57.8
Msa1387330 AT5G39420.1 44.444 63 26 1 1 54 262 324 3.82e-11 57.8
Msa1387330 AT5G64960.1 44.615 65 27 1 1 56 197 261 4.49e-11 57.4
Msa1387330 AT3G05840.2 36.047 86 42 2 4 76 233 318 4.52e-11 57.4
Msa1387330 AT3G05840.1 36.047 86 42 2 4 76 233 318 4.52e-11 57.4
Msa1387330 AT1G57700.1 42.857 63 27 1 1 54 303 365 4.89e-11 57.4
Msa1387330 AT1G18670.2 41.791 67 30 1 1 58 289 355 4.93e-11 57.4
Msa1387330 AT1G18670.1 41.791 67 30 1 1 58 289 355 5.09e-11 57.4
Msa1387330 AT5G26751.1 36.047 86 42 2 4 76 229 314 5.28e-11 57.4
Msa1387330 AT1G09840.3 35.526 76 40 1 4 70 243 318 5.74e-11 57.0
Msa1387330 AT1G09840.7 35.526 76 40 1 4 70 243 318 5.74e-11 57.0
Msa1387330 AT1G09840.10 35.526 76 40 1 4 70 243 318 5.74e-11 57.0
Msa1387330 AT1G09840.6 35.526 76 40 1 4 70 243 318 5.74e-11 57.0
Msa1387330 AT1G09840.4 35.526 76 40 1 4 70 243 318 5.74e-11 57.0
Msa1387330 AT1G09840.1 35.526 76 40 1 4 70 243 318 5.74e-11 57.0
Msa1387330 AT1G09840.9 35.526 76 40 1 4 70 243 318 5.74e-11 57.0
Msa1387330 AT1G09840.5 35.526 76 40 1 4 70 243 318 5.74e-11 57.0
Msa1387330 AT1G09840.8 35.526 76 40 1 4 70 243 318 5.74e-11 57.0
Msa1387330 AT1G09840.2 35.526 76 40 1 4 70 243 318 5.74e-11 57.0
Msa1387330 AT5G14640.1 34.884 86 43 2 4 76 234 319 5.89e-11 57.0
Msa1387330 AT5G14640.2 34.884 86 43 2 4 76 234 319 5.89e-11 57.0
Msa1387330 AT5G64960.2 44.615 65 27 1 1 56 144 208 5.90e-11 57.0
Msa1387330 AT1G09840.11 34.884 86 43 2 4 76 116 201 6.71e-11 56.6
Msa1387330 AT3G01085.3 35.802 81 41 2 1 70 272 352 6.92e-11 57.0
Msa1387330 AT3G01085.1 35.802 81 41 2 1 70 272 352 7.33e-11 57.0
Msa1387330 AT3G01085.2 35.802 81 41 2 1 70 272 352 7.33e-11 57.0

Find 20 sgRNAs with CRISPR-Local

Find 29 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACTAATTAGAAGTGTTCT+TGG 0.263161 tig0020883:-91435 Msa1387330:CDS
ATCGATGGAGGTTCCGTAAT+TGG 0.270595 tig0020883:+91541 None:intergenic
CACTTCTAATTAGTTTCATC+TGG 0.365659 tig0020883:+91442 None:intergenic
GAATTGTGTCCCCTCTGTAT+AGG 0.374575 tig0020883:+91347 None:intergenic
AATTGTGTCCCCTCTGTATA+GGG 0.404592 tig0020883:+91348 None:intergenic
GGCAGAAAGCCAATCTTCCC+TGG 0.432334 tig0020883:-91480 Msa1387330:intron
GCATATCCTAAAAGAAGGTC+TGG 0.454898 tig0020883:+91563 None:intergenic
TTAACTCAAGATCAGACTCT+TGG 0.514842 tig0020883:+91409 None:intergenic
AAGTGATTTGATAAATGCCT+TGG 0.522506 tig0020883:+91371 None:intergenic
TCCATCGATGTGTGGTCCGT+AGG 0.525304 tig0020883:-91527 Msa1387330:CDS
CCATCGATGTGTGGTCCGTA+GGG 0.537547 tig0020883:-91526 Msa1387330:intron
AATTGGCATATCCTAAAAGA+AGG 0.544656 tig0020883:+91558 None:intergenic
AAATCACTTCCCTATACAGA+GGG 0.558882 tig0020883:-91357 Msa1387330:CDS
GCAGAAAGCCAATCTTCCCT+GGG 0.574723 tig0020883:-91479 Msa1387330:intron
CTGAGTATGTTGTCACGCGC+TGG 0.586534 tig0020883:-91595 Msa1387330:CDS
CCCTACGGACCACACATCGA+TGG 0.617558 tig0020883:+91526 None:intergenic
ACGGAACCTCCATCGATGTG+TGG 0.655065 tig0020883:-91535 Msa1387330:CDS
TACGGACCACACATCGATGG+AGG 0.663564 tig0020883:+91529 None:intergenic
CAAATCACTTCCCTATACAG+AGG 0.668994 tig0020883:-91358 Msa1387330:CDS
AATCACTTCCCTATACAGAG+GGG 0.777636 tig0020883:-91356 Msa1387330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAACTAATTAGAAGTGTTCT+TGG - tig0020883:91499-91518 Msa1387330:intron 25.0%
! AATAGTTAATCCAAAAACCA+AGG - tig0020883:91546-91565 Msa1387330:CDS 25.0%
AATTGGCATATCCTAAAAGA+AGG + tig0020883:91379-91398 None:intergenic 30.0%
!!! CTTTTAGGATATGCCAATTA+CGG - tig0020883:91380-91399 Msa1387330:CDS 30.0%
! CATTTTTGTTGAGATATGCT+TGG - tig0020883:91433-91452 Msa1387330:CDS 30.0%
! CACTTCTAATTAGTTTCATC+TGG + tig0020883:91495-91514 None:intergenic 30.0%
!! TTGATAAATGCCTTGGTTTT+TGG + tig0020883:91559-91578 None:intergenic 30.0%
AAGTGATTTGATAAATGCCT+TGG + tig0020883:91566-91585 None:intergenic 30.0%
! AAATTTTTCCCAGGGAAGAT+TGG + tig0020883:91466-91485 None:intergenic 35.0%
TTAACTCAAGATCAGACTCT+TGG + tig0020883:91528-91547 None:intergenic 35.0%
AAATCACTTCCCTATACAGA+GGG - tig0020883:91577-91596 Msa1387330:CDS 35.0%
GCATATCCTAAAAGAAGGTC+TGG + tig0020883:91374-91393 None:intergenic 40.0%
CTCAACAAAAATGCACCCTA+CGG + tig0020883:91426-91445 None:intergenic 40.0%
! GGTGCATCAAATTTTTCCCA+GGG + tig0020883:91474-91493 None:intergenic 40.0%
! TGGTGCATCAAATTTTTCCC+AGG + tig0020883:91475-91494 None:intergenic 40.0%
CAAATCACTTCCCTATACAG+AGG - tig0020883:91576-91595 Msa1387330:CDS 40.0%
AATCACTTCCCTATACAGAG+GGG - tig0020883:91578-91597 Msa1387330:CDS 40.0%
AATTGTGTCCCCTCTGTATA+GGG + tig0020883:91589-91608 None:intergenic 40.0%
ATCGATGGAGGTTCCGTAAT+TGG + tig0020883:91396-91415 None:intergenic 45.0%
GAATTGTGTCCCCTCTGTAT+AGG + tig0020883:91590-91609 None:intergenic 45.0%
! CGAGCTCCAGACCTTCTTTT+AGG - tig0020883:91365-91384 Msa1387330:CDS 50.0%
GCAGAAAGCCAATCTTCCCT+GGG - tig0020883:91455-91474 Msa1387330:CDS 50.0%
CTGAGTATGTTGTCACGCGC+TGG - tig0020883:91339-91358 Msa1387330:CDS 55.0%
ACGGAACCTCCATCGATGTG+TGG - tig0020883:91399-91418 Msa1387330:CDS 55.0%
TACGGACCACACATCGATGG+AGG + tig0020883:91408-91427 None:intergenic 55.0%
TCCATCGATGTGTGGTCCGT+AGG - tig0020883:91407-91426 Msa1387330:CDS 55.0%
CCATCGATGTGTGGTCCGTA+GGG - tig0020883:91408-91427 Msa1387330:CDS 55.0%
GGCAGAAAGCCAATCTTCCC+TGG - tig0020883:91454-91473 Msa1387330:CDS 55.0%
CCCTACGGACCACACATCGA+TGG + tig0020883:91411-91430 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0020883 gene 91335 91621 91335 ID=Msa1387330;Name=Msa1387330
tig0020883 mRNA 91335 91621 91335 ID=Msa1387330-mRNA-1;Parent=Msa1387330;Name=Msa1387330-mRNA-1;_AED=0.42;_eAED=0.42;_QI=0|0|0|1|0|0.5|2|0|85
tig0020883 exon 91527 91621 91527 ID=Msa1387330-mRNA-1:exon:10553;Parent=Msa1387330-mRNA-1
tig0020883 exon 91335 91497 91335 ID=Msa1387330-mRNA-1:exon:10552;Parent=Msa1387330-mRNA-1
tig0020883 CDS 91527 91621 91527 ID=Msa1387330-mRNA-1:cds;Parent=Msa1387330-mRNA-1
tig0020883 CDS 91335 91497 91335 ID=Msa1387330-mRNA-1:cds;Parent=Msa1387330-mRNA-1
Gene Sequence

>Msa1387330

ATGACTGAGTATGTTGTCACGCGCTGGTATCGAGCTCCAGACCTTCTTTTAGGATATGCCAATTACGGAACCTCCATCGATGTGTGGTCCGTAGGAAAGCCAATCTTCCCTGGGAAAAATTTGATGCACCAGATGAAACTAATTAGAAGTGTTCTTGGAAGCCAAGAGTCTGATCTTGAGTTAATAGTTAATCCAAAAACCAAGGCATTTATCAAATCACTTCCCTATACAGAGGGGACACAATTCTCTCAGCTATAA
Protein sequence

>Msa1387330

MTEYVVTRWYRAPDLLLGYANYGTSIDVWSVGKPIFPGKNLMHQMKLIRSVLGSQESDLELIVNPKTKAFIKSLPYTEGTQFSQL*