AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1388480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1388480 MtrunA17_Chr5g0440741 89.286 168 18 0 92 259 10 177 1.83e-104 305
Msa1388480 MtrunA17_Chr5g0440731 86.127 173 19 2 92 259 10 182 9.39e-101 295
Msa1388480 MtrunA17_Chr5g0409841 66.082 171 45 5 99 259 1 168 5.43e-67 207
Msa1388480 MtrunA17_Chr1g0168341 95.349 86 3 1 1 86 150 234 2.62e-53 172
Msa1388480 MtrunA17_Chr1g0155631 95.349 86 3 1 1 86 150 234 2.71e-53 172
Msa1388480 MtrunA17_Chr5g0409831 58.434 166 52 4 99 259 1 154 4.07e-51 167
Msa1388480 MtrunA17_Chr6g0469891 82.558 86 15 0 1 86 146 231 1.46e-46 155
Msa1388480 MtrunA17_Chr6g0469871 82.558 86 15 0 1 86 146 231 1.46e-46 155
Msa1388480 MtrunA17_Chr1g0210251 81.395 86 16 0 1 86 150 235 2.64e-44 149
Msa1388480 MtrunA17_Chr1g0162081 58.974 78 27 3 180 255 119 193 1.44e-22 94.4
Msa1388480 MtrunA17_Chr3g0104071 63.380 71 20 3 184 252 149 215 2.85e-22 94.0
Msa1388480 MtrunA17_Chr5g0429521 58.974 78 26 3 184 259 134 207 3.54e-22 93.2
Msa1388480 MtrunA17_Chr5g0436501 52.632 95 34 3 177 261 119 212 5.69e-22 92.0
Msa1388480 MtrunA17_Chr1g0210471 65.672 67 20 1 184 250 126 189 6.23e-22 91.3
Msa1388480 MtrunA17_Chr7g0241761 55.696 79 32 1 173 251 131 206 4.83e-21 90.1
Msa1388480 MtrunA17_Chr4g0062741 52.439 82 35 2 180 260 135 213 6.65e-21 89.7
Msa1388480 MtrunA17_Chr8g0365011 53.571 84 26 2 183 254 93 175 6.66e-20 86.7
Msa1388480 MtrunA17_Chr5g0409951 54.082 98 31 3 96 187 21 110 2.44e-19 84.7
Msa1388480 MtrunA17_Chr3g0135671 51.429 70 34 0 184 253 93 162 6.41e-19 83.2
Msa1388480 MtrunA17_Chr2g0331031 55.385 65 26 1 184 248 111 172 4.56e-18 82.4
Msa1388480 MtrunA17_Chr5g0432921 40.984 122 69 2 139 260 72 190 4.89e-18 80.5
Msa1388480 MtrunA17_Chr8g0364731 59.375 64 25 1 191 254 10 72 6.89e-18 79.3
Msa1388480 MtrunA17_Chr4g0055931 40.678 118 53 5 142 248 47 158 2.73e-17 80.1
Msa1388480 MtrunA17_Chr8g0389241 53.846 65 26 1 184 248 107 167 7.54e-17 78.2
Msa1388480 MtrunA17_Chr4g0059701 71.111 45 13 0 184 228 86 130 1.40e-16 77.4
Msa1388480 MtrunA17_Chr5g0415191 71.111 45 13 0 184 228 104 148 2.18e-16 77.4
Msa1388480 MtrunA17_Chr6g0488471 53.846 65 27 1 184 248 99 160 4.06e-16 76.3
Msa1388480 MtrunA17_Chr5g0432941 39.640 111 57 2 159 260 81 190 1.45e-15 73.6
Msa1388480 MtrunA17_Chr3g0113121 55.556 72 28 2 183 250 96 167 4.01e-15 72.4
Msa1388480 MtrunA17_Chr6g0452791 54.386 57 26 0 184 240 82 138 1.01e-14 70.1
Msa1388480 MtrunA17_Chr3g0092621 45.714 70 35 1 184 253 86 152 1.43e-14 69.7
Msa1388480 MtrunA17_Chr1g0192061 38.462 130 59 7 150 261 13 139 3.10e-14 69.3
Msa1388480 MtrunA17_Chr8g0370121 39.394 66 37 1 184 246 102 167 8.48e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1388480 AT5G35530.1 80.519 77 15 0 1 77 150 226 1.74e-41 143
Msa1388480 AT3G53870.1 85.294 68 10 0 1 68 150 217 3.25e-38 134
Msa1388480 AT2G31610.1 77.632 76 17 0 1 76 150 225 4.64e-38 134
Msa1388480 AT5G04760.1 63.158 76 25 1 175 250 92 164 1.59e-23 95.5
Msa1388480 AT5G58900.1 60.000 80 26 2 184 260 143 219 5.39e-23 95.5
Msa1388480 AT5G08520.1 58.025 81 30 2 180 259 115 192 6.47e-23 95.5
Msa1388480 AT5G01200.1 64.286 70 21 2 184 252 148 214 6.10e-22 92.4
Msa1388480 AT1G49010.1 54.217 83 33 3 180 260 131 210 3.69e-21 90.9
Msa1388480 AT2G38090.1 57.317 82 30 3 177 256 135 213 4.85e-21 90.5
Msa1388480 AT3G11280.2 58.667 75 24 2 184 254 129 200 1.39e-20 88.6
Msa1388480 AT3G11280.1 58.667 75 24 2 184 254 129 200 1.39e-20 88.6
Msa1388480 AT5G23650.1 55.263 76 31 1 184 259 122 194 8.22e-20 87.8
Msa1388480 AT5G05790.2 57.500 80 26 3 180 254 128 204 8.59e-20 86.7
Msa1388480 AT5G05790.1 57.500 80 26 3 180 254 128 204 8.59e-20 86.7
Msa1388480 AT5G61620.1 55.844 77 30 2 176 251 101 174 6.59e-19 84.7
Msa1388480 AT3G10580.2 50.000 78 34 1 184 261 97 169 3.08e-18 82.0
Msa1388480 AT3G10580.1 50.000 78 34 1 184 261 97 169 4.42e-18 82.0
Msa1388480 AT4G09450.1 57.353 68 26 1 184 251 93 157 1.49e-17 79.0
Msa1388480 AT5G47390.1 56.061 66 24 2 184 248 98 159 3.65e-17 80.5
Msa1388480 AT5G56840.1 55.385 65 27 1 184 248 93 155 1.10e-16 77.4
Msa1388480 AT1G70000.1 71.111 45 13 0 184 228 100 144 1.20e-16 77.8
Msa1388480 AT1G70000.2 71.111 45 13 0 184 228 100 144 1.20e-16 77.8
Msa1388480 AT1G19000.2 45.745 94 43 3 140 228 58 148 5.86e-16 76.3
Msa1388480 AT1G19000.1 45.745 94 43 3 140 228 58 148 5.86e-16 76.3
Msa1388480 AT1G74840.2 71.111 45 13 0 184 228 98 142 8.30e-16 75.1
Msa1388480 AT3G16350.1 66.667 45 15 0 184 228 139 183 9.04e-16 76.6
Msa1388480 AT1G74840.1 71.111 45 13 0 184 228 98 142 1.03e-15 75.1
Msa1388480 AT3G10590.1 41.837 98 48 3 159 251 83 176 5.56e-14 69.3

Find 105 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCCATATCTTTCACATTT+TGG 0.113024 tig0021070:-68422 None:intergenic
CAATGTGTCATTCTTGTTTA+AGG 0.128626 tig0021070:-68481 None:intergenic
AGCTAAATCAATGAAATTTA+AGG 0.182819 tig0021070:+66892 Msa1388480:exon
GTAGGGTGTTCTTGGTATTA+AGG 0.234740 tig0021070:+67080 Msa1388480:intron
CTGTCCAATGCCCTTTCCTT+GGG 0.257949 tig0021070:-68012 None:intergenic
TTTATGTTGTAGGGTGTTCT+TGG 0.278662 tig0021070:+67072 Msa1388480:intron
TTAGGACCTTGCTTTCCTTT+AGG 0.279269 tig0021070:-67126 None:intergenic
CTTGGGGCATGACTTTCTTC+TGG 0.281577 tig0021070:-67995 None:intergenic
TCCCCTGTTGTTAACTTTCT+CGG 0.302506 tig0021070:-66719 None:intergenic
CGGTGTCTTAAGGTTTGTTA+TGG 0.306736 tig0021070:+66816 Msa1388480:five_prime_UTR
GATATTCCGGTGTTGAGGTT+AGG 0.312781 tig0021070:+66475 Msa1388480:five_prime_UTR
TCTGTCCAATGCCCTTTCCT+TGG 0.314383 tig0021070:-68013 None:intergenic
CCACCAAAATGTGAAAGATA+TGG 0.357161 tig0021070:+68419 Msa1388480:CDS
ATGTACTCTTCCTCCTCCTT+TGG 0.368666 tig0021070:-67183 None:intergenic
ACCACCCGACTCAATGATAT+TGG 0.374047 tig0021070:-67888 None:intergenic
GTGTGAATGGTAACAATATT+AGG 0.375444 tig0021070:-67159 None:intergenic
CTTGCTGAAGATGGATATTC+CGG 0.389295 tig0021070:+66462 Msa1388480:five_prime_UTR
ACCAGAGAGCTTGCTGAAGA+TGG 0.399257 tig0021070:+66453 Msa1388480:five_prime_UTR
GAGCCTGTTACGGTGTCTTA+AGG 0.399525 tig0021070:+66806 Msa1388480:five_prime_UTR
TTGTTCCATGCTATGCTTAG+AGG 0.399588 tig0021070:-67846 None:intergenic
TGCTATGCTTAGAGGGATCT+TGG 0.401870 tig0021070:-67838 None:intergenic
GAGTCAATGTAATCCTTAAC+AGG 0.402767 tig0021070:-66941 None:intergenic
CTCCTCCTTTGGAGTGTGAA+TGG 0.408543 tig0021070:-67172 None:intergenic
AAAACCATTTCTTCAAAACT+AGG 0.418370 tig0021070:+66192 Msa1388480:five_prime_UTR
ATATTCCGGTGTTGAGGTTA+GGG 0.419953 tig0021070:+66476 Msa1388480:five_prime_UTR
AAATATTTCAAAAGAATTTG+TGG 0.425853 tig0021070:+68347 Msa1388480:CDS
CCATGTTTGCAGATTTAGCT+AGG 0.429489 tig0021070:-66271 None:intergenic
AAACCTTAAGACACCGTAAC+AGG 0.430068 tig0021070:-66809 None:intergenic
AGGTAAAGATTATGCTTGAC+TGG 0.432560 tig0021070:+67100 Msa1388480:CDS
ATGCCGAGAAAGTTAACAAC+AGG 0.438391 tig0021070:+66716 Msa1388480:five_prime_UTR
GAACAACAACAGGAGAAAAC+TGG 0.441684 tig0021070:+67863 Msa1388480:CDS
TATGATTAGGTGAGAAGGGT+AGG 0.454324 tig0021070:+66626 Msa1388480:intron
TGTGAAAGATATGGAAAAGA+AGG 0.454324 tig0021070:+68428 Msa1388480:CDS
TCTCTTCGTTAAAAGCTTCT+CGG 0.455431 tig0021070:+66766 Msa1388480:five_prime_UTR
AGGAGGAGGAAGAGTACATC+AGG 0.461009 tig0021070:+67187 Msa1388480:CDS
CTCGTCCGGACAACCTGTTA+AGG 0.466411 tig0021070:+66928 Msa1388480:CDS
GCATAGCATGGAACAACAAC+AGG 0.469925 tig0021070:+67853 Msa1388480:CDS
TAGACATGTTCTTCTTAGAC+AGG 0.473972 tig0021070:+66970 Msa1388480:CDS
GCTCATTTAAATCAATTTGA+AGG 0.475975 tig0021070:-67805 None:intergenic
TCAAATTGATTTAAATGAGC+CGG 0.477484 tig0021070:+67808 Msa1388480:CDS
CATGTTTGCAGATTTAGCTA+GGG 0.479989 tig0021070:-66270 None:intergenic
AATTTATGATTAGGTGAGAA+GGG 0.490999 tig0021070:+66622 Msa1388480:intron
TCCATCTTCAGCAAGCTCTC+TGG 0.491889 tig0021070:-66454 None:intergenic
TGTTATGGAAAGTGGTGCTA+AGG 0.493149 tig0021070:+66831 Msa1388480:five_prime_UTR
AAAGTCATGCCCCAAGGAAA+GGG 0.493395 tig0021070:+68002 Msa1388480:CDS
TACAGTTCAACACTGGTCTC+AGG 0.495330 tig0021070:-66694 None:intergenic
AAACCATTTCTTCAAAACTA+GGG 0.499059 tig0021070:+66193 Msa1388480:five_prime_UTR
GTAATCCTTAACAGGTTGTC+CGG 0.503308 tig0021070:-66933 None:intergenic
AATCAATGAAATTTAAGGAC+GGG 0.503492 tig0021070:+66897 Msa1388480:exon
AATGGTAACAATATTAGGTA+GGG 0.506938 tig0021070:-67154 None:intergenic
TGTTCCATGCTATGCTTAGA+GGG 0.507895 tig0021070:-67845 None:intergenic
GTGTTGCAGTTCGTCGCTGA+CGG 0.508869 tig0021070:+66399 Msa1388480:intron
TTAAGGTTTGTTATGGAAAG+TGG 0.511437 tig0021070:+66823 Msa1388480:five_prime_UTR
GGCACCAATATCATTGAGTC+GGG 0.516068 tig0021070:+67884 Msa1388480:CDS
ACCACTAACGGAGAACAGCT+TGG 0.523741 tig0021070:-66542 None:intergenic
GACGGGTATATGATCTCGTC+CGG 0.524013 tig0021070:+66914 Msa1388480:CDS
ATGCCCCAAGGAAAGGGCAT+TGG 0.524782 tig0021070:+68008 Msa1388480:CDS
TATTGTCAGTGGAAAATTGA+GGG 0.525395 tig0021070:+66864 Msa1388480:five_prime_UTR
TTTGCAACAACAGCAGCAGC+AGG 0.525402 tig0021070:-67210 None:intergenic
GAATGGTAACAATATTAGGT+AGG 0.525891 tig0021070:-67155 None:intergenic
GAGGGATCTTGGACTGAAGC+CGG 0.526678 tig0021070:-67827 None:intergenic
CCACTAACGGAGAACAGCTT+GGG 0.527110 tig0021070:-66541 None:intergenic
GAAAGTCATGCCCCAAGGAA+AGG 0.527463 tig0021070:+68001 Msa1388480:CDS
TTTCTTCGCTGAATTGAATG+AGG 0.530015 tig0021070:+66425 Msa1388480:five_prime_UTR
CCTAGCTAAATCTGCAAACA+TGG 0.534629 tig0021070:+66271 Msa1388480:five_prime_UTR
GATTAGGTGAGAAGGGTAGG+AGG 0.538783 tig0021070:+66629 Msa1388480:intron
GCATGGCTAGCAACTTGAGT+TGG 0.543969 tig0021070:-68381 None:intergenic
GCTGTTCGCAGAGCCTGTTA+CGG 0.553152 tig0021070:+66796 Msa1388480:five_prime_UTR
GGCTGTGAGGTTATTGTCAG+TGG 0.553460 tig0021070:+66853 Msa1388480:five_prime_UTR
ATTTAAATCAATTTGAAGGA+GGG 0.554059 tig0021070:-67801 None:intergenic
ATGCTTGACTGGGATCCTAA+AGG 0.556783 tig0021070:+67111 Msa1388480:CDS
TGTCCAATGCCCTTTCCTTG+GGG 0.558952 tig0021070:-68011 None:intergenic
ATTAGAGTTTAGAATTGCAA+CGG 0.560593 tig0021070:-67912 None:intergenic
GATGATGATTTCAGTGCGCA+TGG 0.564175 tig0021070:-66505 None:intergenic
GAATTTATGATTAGGTGAGA+AGG 0.566300 tig0021070:+66621 Msa1388480:intron
CATTTAAATCAATTTGAAGG+AGG 0.570848 tig0021070:-67802 None:intergenic
TTTGGTATAGAAAGCATGGA+AGG 0.576489 tig0021070:+67758 Msa1388480:intron
TGGCACCAATATCATTGAGT+CGG 0.577067 tig0021070:+67883 Msa1388480:CDS
TTATTGTCAGTGGAAAATTG+AGG 0.586639 tig0021070:+66863 Msa1388480:five_prime_UTR
AGATGGATATTCCGGTGTTG+AGG 0.592650 tig0021070:+66470 Msa1388480:five_prime_UTR
GGTAAAGATTATGCTTGACT+GGG 0.593803 tig0021070:+67101 Msa1388480:CDS
TGGGATCCTAAAGGAAAGCA+AGG 0.601952 tig0021070:+67120 Msa1388480:CDS
GTTATGGAAAGTGGTGCTAA+GGG 0.606130 tig0021070:+66832 Msa1388480:five_prime_UTR
ACCAATATCATTGAGTCGGG+TGG 0.607339 tig0021070:+67887 Msa1388480:CDS
CTTAAACAAGAATGACACAT+TGG 0.607666 tig0021070:+68482 Msa1388480:CDS
AGATCCCTCTAAGCATAGCA+TGG 0.610055 tig0021070:+67841 Msa1388480:CDS
ATGGTAACAATATTAGGTAG+GGG 0.613809 tig0021070:-67153 None:intergenic
AAATCAATGAAATTTAAGGA+CGG 0.616225 tig0021070:+66896 Msa1388480:exon
TACCATTCACACTCCAAAGG+AGG 0.618529 tig0021070:+67170 Msa1388480:CDS
ATGTTTGCAGATTTAGCTAG+GGG 0.618769 tig0021070:-66269 None:intergenic
CATTCACACTCCAAAGGAGG+AGG 0.623248 tig0021070:+67173 Msa1388480:CDS
AAGAGACTCAGCTTGTGCAA+TGG 0.623807 tig0021070:-66749 None:intergenic
TGTTACCATTCACACTCCAA+AGG 0.627045 tig0021070:+67167 Msa1388480:CDS
CTCGGCATACAGTTCAACAC+TGG 0.628740 tig0021070:-66701 None:intergenic
CAGAAGAAAGTCATGCCCCA+AGG 0.636413 tig0021070:+67996 Msa1388480:CDS
AAGGAAAGGGCATTGGACAG+AGG 0.658250 tig0021070:+68015 Msa1388480:CDS
GTTCAATGTTTAAGTCCCTG+TGG 0.669035 tig0021070:+67340 Msa1388480:CDS
ATGATGATTTCAGTGCGCAT+GGG 0.669745 tig0021070:-66504 None:intergenic
AGTAACCCTAACCTCAACAC+CGG 0.681090 tig0021070:-66481 None:intergenic
CTTCGTTAAAAGCTTCTCGG+TGG 0.688414 tig0021070:+66769 Msa1388480:five_prime_UTR
TGCCGAGAAAGTTAACAACA+GGG 0.702659 tig0021070:+66717 Msa1388480:five_prime_UTR
GCCGAGAAAGTTAACAACAG+GGG 0.711387 tig0021070:+66718 Msa1388480:five_prime_UTR
TGTTTGCAGATTTAGCTAGG+GGG 0.715139 tig0021070:-66268 None:intergenic
TGTTGTTGCAAATGATATCG+AGG 0.727391 tig0021070:+67221 Msa1388480:CDS
AAGTGGTGCTAAGGGCTGTG+AGG 0.739761 tig0021070:+66840 Msa1388480:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTAATCTGATTTAAA+TGG + tig0021070:66583-66602 Msa1388480:intron 10.0%
!!! TATTTTTAATCTGATTTAAA+TGG + tig0021070:66583-66602 Msa1388480:intron 10.0%
!!! TTGATATTTAATTTGATTTG+CGG + tig0021070:66377-66396 Msa1388480:intron 15.0%
!! TGATTTATGAATTTATGATT+AGG + tig0021070:66613-66632 Msa1388480:intron 15.0%
!!! AATTCTTATAGTTGTATTTT+TGG + tig0021070:67740-67759 Msa1388480:intron 15.0%
!! AAATATTTCAAAAGAATTTG+TGG + tig0021070:68347-68366 Msa1388480:CDS 15.0%
!!! TTGATATTTAATTTGATTTG+CGG + tig0021070:66377-66396 Msa1388480:intron 15.0%
!! TGATTTATGAATTTATGATT+AGG + tig0021070:66613-66632 Msa1388480:intron 15.0%
!!! AATTCTTATAGTTGTATTTT+TGG + tig0021070:67740-67759 Msa1388480:intron 15.0%
!! AAATATTTCAAAAGAATTTG+TGG + tig0021070:68347-68366 Msa1388480:CDS 15.0%
!! AATTAAGAAATCACTACTAA+TGG - tig0021070:66351-66370 None:intergenic 20.0%
!! TAATTTGATTAAACCACTAA+CGG - tig0021070:66557-66576 None:intergenic 20.0%
!! AGCTAAATCAATGAAATTTA+AGG + tig0021070:66892-66911 Msa1388480:exon 20.0%
!! AAATCAATGAAATTTAAGGA+CGG + tig0021070:66896-66915 Msa1388480:exon 20.0%
!!! ATTATGTCATTTATGTTGTA+GGG + tig0021070:67063-67082 Msa1388480:intron 20.0%
!! ATTATGATATCTTCTTGTTA+TGG + tig0021070:67500-67519 Msa1388480:intron 20.0%
!! TGAAAGTTAAGAAAATTACT+TGG - tig0021070:67551-67570 None:intergenic 20.0%
!!! AGGCATAATTGATTTAATTA+AGG + tig0021070:67594-67613 Msa1388480:intron 20.0%
!!! CATGCATAATATTTTTTGAA+TGG - tig0021070:67686-67705 None:intergenic 20.0%
!! TTCAAAAAATATTATGCATG+TGG + tig0021070:67686-67705 Msa1388480:intron 20.0%
!! TAATTCAAATTGGATGAAAT+TGG + tig0021070:67712-67731 Msa1388480:intron 20.0%
!! ATTTAAATCAATTTGAAGGA+GGG - tig0021070:67804-67823 None:intergenic 20.0%
!! TAAAAATAACTCTCAAACAT+AGG - tig0021070:68079-68098 None:intergenic 20.0%
!! CATTTGTTTAGTTATGAATA+TGG + tig0021070:68207-68226 Msa1388480:intron 20.0%
!!! TATATATAGGTTGTTTTTGA+AGG + tig0021070:68293-68312 Msa1388480:intron 20.0%
!!! ATATATAGGTTGTTTTTGAA+GGG + tig0021070:68294-68313 Msa1388480:intron 20.0%
!! AATTAAGAAATCACTACTAA+TGG - tig0021070:66351-66370 None:intergenic 20.0%
!! TAATTTGATTAAACCACTAA+CGG - tig0021070:66557-66576 None:intergenic 20.0%
!! AGCTAAATCAATGAAATTTA+AGG + tig0021070:66892-66911 Msa1388480:exon 20.0%
!! AAATCAATGAAATTTAAGGA+CGG + tig0021070:66896-66915 Msa1388480:exon 20.0%
!!! ATTATGTCATTTATGTTGTA+GGG + tig0021070:67063-67082 Msa1388480:intron 20.0%
!! ATTATGATATCTTCTTGTTA+TGG + tig0021070:67500-67519 Msa1388480:intron 20.0%
!! TGAAAGTTAAGAAAATTACT+TGG - tig0021070:67551-67570 None:intergenic 20.0%
!!! AGGCATAATTGATTTAATTA+AGG + tig0021070:67594-67613 Msa1388480:intron 20.0%
!!! CATGCATAATATTTTTTGAA+TGG - tig0021070:67686-67705 None:intergenic 20.0%
!! TTCAAAAAATATTATGCATG+TGG + tig0021070:67686-67705 Msa1388480:intron 20.0%
!! TAATTCAAATTGGATGAAAT+TGG + tig0021070:67712-67731 Msa1388480:intron 20.0%
!! ATTTAAATCAATTTGAAGGA+GGG - tig0021070:67804-67823 None:intergenic 20.0%
!! TAAAAATAACTCTCAAACAT+AGG - tig0021070:68079-68098 None:intergenic 20.0%
!! CATTTGTTTAGTTATGAATA+TGG + tig0021070:68207-68226 Msa1388480:intron 20.0%
!!! TATATATAGGTTGTTTTTGA+AGG + tig0021070:68293-68312 Msa1388480:intron 20.0%
!!! ATATATAGGTTGTTTTTGAA+GGG + tig0021070:68294-68313 Msa1388480:intron 20.0%
!! TTGAAGAAATGGTTTTTCTA+GGG - tig0021070:66188-66207 None:intergenic 25.0%
!! TTTGAAGAAATGGTTTTTCT+AGG - tig0021070:66189-66208 None:intergenic 25.0%
! AAAACCATTTCTTCAAAACT+AGG + tig0021070:66192-66211 Msa1388480:five_prime_UTR 25.0%
! AAACCATTTCTTCAAAACTA+GGG + tig0021070:66193-66212 Msa1388480:five_prime_UTR 25.0%
! AATTTATGATTAGGTGAGAA+GGG + tig0021070:66622-66641 Msa1388480:intron 25.0%
! AATCAATGAAATTTAAGGAC+GGG + tig0021070:66897-66916 Msa1388480:exon 25.0%
!! GATTATGTCATTTATGTTGT+AGG + tig0021070:67062-67081 Msa1388480:intron 25.0%
! AATGGTAACAATATTAGGTA+GGG - tig0021070:67157-67176 None:intergenic 25.0%
! ATCATATAAAAGACAAGATC+AGG - tig0021070:67387-67406 None:intergenic 25.0%
! CATGTGGATATAATTCAAAT+TGG + tig0021070:67702-67721 Msa1388480:intron 25.0%
!!! TATTTTTGGTATAGAAAGCA+TGG + tig0021070:67754-67773 Msa1388480:intron 25.0%
! CATTTAAATCAATTTGAAGG+AGG - tig0021070:67805-67824 None:intergenic 25.0%
! GCTCATTTAAATCAATTTGA+AGG - tig0021070:67808-67827 None:intergenic 25.0%
!! TCAAATTGATTTAAATGAGC+CGG + tig0021070:67808-67827 Msa1388480:CDS 25.0%
!! ATTAGAGTTTAGAATTGCAA+CGG - tig0021070:67915-67934 None:intergenic 25.0%
! CACATTCATTCTCTATATAT+AGG + tig0021070:68280-68299 Msa1388480:intron 25.0%
!!! TATATAGGTTGTTTTTGAAG+GGG + tig0021070:68295-68314 Msa1388480:intron 25.0%
!!! TTGGTGGTTAAAGTATTTTT+GGG - tig0021070:68406-68425 None:intergenic 25.0%
!!! TTTGGTGGTTAAAGTATTTT+TGG - tig0021070:68407-68426 None:intergenic 25.0%
!! TTTCCATATCTTTCACATTT+TGG - tig0021070:68425-68444 None:intergenic 25.0%
!! TTGAAGAAATGGTTTTTCTA+GGG - tig0021070:66188-66207 None:intergenic 25.0%
!! TTTGAAGAAATGGTTTTTCT+AGG - tig0021070:66189-66208 None:intergenic 25.0%
! AAAACCATTTCTTCAAAACT+AGG + tig0021070:66192-66211 Msa1388480:five_prime_UTR 25.0%
! AAACCATTTCTTCAAAACTA+GGG + tig0021070:66193-66212 Msa1388480:five_prime_UTR 25.0%
! AATTTATGATTAGGTGAGAA+GGG + tig0021070:66622-66641 Msa1388480:intron 25.0%
! AATCAATGAAATTTAAGGAC+GGG + tig0021070:66897-66916 Msa1388480:exon 25.0%
!! GATTATGTCATTTATGTTGT+AGG + tig0021070:67062-67081 Msa1388480:intron 25.0%
! AATGGTAACAATATTAGGTA+GGG - tig0021070:67157-67176 None:intergenic 25.0%
! ATCATATAAAAGACAAGATC+AGG - tig0021070:67387-67406 None:intergenic 25.0%
! CATGTGGATATAATTCAAAT+TGG + tig0021070:67702-67721 Msa1388480:intron 25.0%
!!! TATTTTTGGTATAGAAAGCA+TGG + tig0021070:67754-67773 Msa1388480:intron 25.0%
! CATTTAAATCAATTTGAAGG+AGG - tig0021070:67805-67824 None:intergenic 25.0%
! GCTCATTTAAATCAATTTGA+AGG - tig0021070:67808-67827 None:intergenic 25.0%
!! TCAAATTGATTTAAATGAGC+CGG + tig0021070:67808-67827 Msa1388480:CDS 25.0%
!! ATTAGAGTTTAGAATTGCAA+CGG - tig0021070:67915-67934 None:intergenic 25.0%
! CACATTCATTCTCTATATAT+AGG + tig0021070:68280-68299 Msa1388480:intron 25.0%
!!! TATATAGGTTGTTTTTGAAG+GGG + tig0021070:68295-68314 Msa1388480:intron 25.0%
!!! TTGGTGGTTAAAGTATTTTT+GGG - tig0021070:68406-68425 None:intergenic 25.0%
!!! TTTGGTGGTTAAAGTATTTT+TGG - tig0021070:68407-68426 None:intergenic 25.0%
!! TTTCCATATCTTTCACATTT+TGG - tig0021070:68425-68444 None:intergenic 25.0%
! TGAAGAAATGGTTTTTCTAG+GGG - tig0021070:66187-66206 None:intergenic 30.0%
!!! AAACCCTAGTTTTGAAGAAA+TGG - tig0021070:66199-66218 None:intergenic 30.0%
GAATTTATGATTAGGTGAGA+AGG + tig0021070:66621-66640 Msa1388480:intron 30.0%
! CAGGAAACTTAAATCTTTTC+TGG - tig0021070:66678-66697 None:intergenic 30.0%
!! TTAAGGTTTGTTATGGAAAG+TGG + tig0021070:66823-66842 Msa1388480:five_prime_UTR 30.0%
TTATTGTCAGTGGAAAATTG+AGG + tig0021070:66863-66882 Msa1388480:five_prime_UTR 30.0%
TATTGTCAGTGGAAAATTGA+GGG + tig0021070:66864-66883 Msa1388480:five_prime_UTR 30.0%
TTATGATCCAACAACCTTAT+TGG + tig0021070:66998-67017 Msa1388480:intron 30.0%
!! TTCGTTCATATGGTTTGTTA+TGG + tig0021070:67024-67043 Msa1388480:intron 30.0%
ATGGTAACAATATTAGGTAG+GGG - tig0021070:67156-67175 None:intergenic 30.0%
GAATGGTAACAATATTAGGT+AGG - tig0021070:67158-67177 None:intergenic 30.0%
GTGTGAATGGTAACAATATT+AGG - tig0021070:67162-67181 None:intergenic 30.0%
CAAAACATTCTCAAACAACA+GGG - tig0021070:67260-67279 None:intergenic 30.0%
TCAAAACATTCTCAAACAAC+AGG - tig0021070:67261-67280 None:intergenic 30.0%
TTACTTTGATACCATTGAAG+TGG + tig0021070:67431-67450 Msa1388480:intron 30.0%
! TCTTGTTATGGTTCTGTAAT+TGG + tig0021070:67512-67531 Msa1388480:intron 30.0%
!! CTGTAATTGGTTTGAGTAAT+TGG + tig0021070:67525-67544 Msa1388480:intron 30.0%
! TTGTCTAGTTCATCTGATTA+AGG + tig0021070:67574-67593 Msa1388480:intron 30.0%
!!! GCATCATTTTTTGAGTAAAC+CGG + tig0021070:67616-67635 Msa1388480:intron 30.0%
!!! CATCATTTTTTGAGTAAACC+GGG + tig0021070:67617-67636 Msa1388480:intron 30.0%
TGTGAAAGATATGGAAAAGA+AGG + tig0021070:68428-68447 Msa1388480:CDS 30.0%
! CAATGTGTCATTCTTGTTTA+AGG - tig0021070:68484-68503 None:intergenic 30.0%
CTTAAACAAGAATGACACAT+TGG + tig0021070:68482-68501 Msa1388480:CDS 30.0%
! TGAAGAAATGGTTTTTCTAG+GGG - tig0021070:66187-66206 None:intergenic 30.0%
!!! AAACCCTAGTTTTGAAGAAA+TGG - tig0021070:66199-66218 None:intergenic 30.0%
GAATTTATGATTAGGTGAGA+AGG + tig0021070:66621-66640 Msa1388480:intron 30.0%
! CAGGAAACTTAAATCTTTTC+TGG - tig0021070:66678-66697 None:intergenic 30.0%
!! TTAAGGTTTGTTATGGAAAG+TGG + tig0021070:66823-66842 Msa1388480:five_prime_UTR 30.0%
TTATTGTCAGTGGAAAATTG+AGG + tig0021070:66863-66882 Msa1388480:five_prime_UTR 30.0%
TATTGTCAGTGGAAAATTGA+GGG + tig0021070:66864-66883 Msa1388480:five_prime_UTR 30.0%
TTATGATCCAACAACCTTAT+TGG + tig0021070:66998-67017 Msa1388480:intron 30.0%
!! TTCGTTCATATGGTTTGTTA+TGG + tig0021070:67024-67043 Msa1388480:intron 30.0%
ATGGTAACAATATTAGGTAG+GGG - tig0021070:67156-67175 None:intergenic 30.0%
GAATGGTAACAATATTAGGT+AGG - tig0021070:67158-67177 None:intergenic 30.0%
GTGTGAATGGTAACAATATT+AGG - tig0021070:67162-67181 None:intergenic 30.0%
CAAAACATTCTCAAACAACA+GGG - tig0021070:67260-67279 None:intergenic 30.0%
TCAAAACATTCTCAAACAAC+AGG - tig0021070:67261-67280 None:intergenic 30.0%
TTACTTTGATACCATTGAAG+TGG + tig0021070:67431-67450 Msa1388480:intron 30.0%
! TCTTGTTATGGTTCTGTAAT+TGG + tig0021070:67512-67531 Msa1388480:intron 30.0%
!! CTGTAATTGGTTTGAGTAAT+TGG + tig0021070:67525-67544 Msa1388480:intron 30.0%
! TTGTCTAGTTCATCTGATTA+AGG + tig0021070:67574-67593 Msa1388480:intron 30.0%
!!! GCATCATTTTTTGAGTAAAC+CGG + tig0021070:67616-67635 Msa1388480:intron 30.0%
!!! CATCATTTTTTGAGTAAACC+GGG + tig0021070:67617-67636 Msa1388480:intron 30.0%
TGTGAAAGATATGGAAAAGA+AGG + tig0021070:68428-68447 Msa1388480:CDS 30.0%
! CAATGTGTCATTCTTGTTTA+AGG - tig0021070:68484-68503 None:intergenic 30.0%
CTTAAACAAGAATGACACAT+TGG + tig0021070:68482-68501 Msa1388480:CDS 30.0%
ATGTTTGCAGATTTAGCTAG+GGG - tig0021070:66272-66291 None:intergenic 35.0%
CATGTTTGCAGATTTAGCTA+GGG - tig0021070:66273-66292 None:intergenic 35.0%
!!! CTTTCGCTTTTTGCTCATTT+GGG - tig0021070:66300-66319 None:intergenic 35.0%
TTTCTTCGCTGAATTGAATG+AGG + tig0021070:66425-66444 Msa1388480:five_prime_UTR 35.0%
! AAATCTTTTCTGGACTACTG+AGG - tig0021070:66668-66687 None:intergenic 35.0%
TCTCTTCGTTAAAAGCTTCT+CGG + tig0021070:66766-66785 Msa1388480:five_prime_UTR 35.0%
GAGTCAATGTAATCCTTAAC+AGG - tig0021070:66944-66963 None:intergenic 35.0%
TAGACATGTTCTTCTTAGAC+AGG + tig0021070:66970-66989 Msa1388480:CDS 35.0%
ATATGAACGAACGACCAATA+AGG - tig0021070:67015-67034 None:intergenic 35.0%
TTATTGGTCGTTCGTTCATA+TGG + tig0021070:67014-67033 Msa1388480:intron 35.0%
! TTTATGTTGTAGGGTGTTCT+TGG + tig0021070:67072-67091 Msa1388480:intron 35.0%
AGGTAAAGATTATGCTTGAC+TGG + tig0021070:67100-67119 Msa1388480:CDS 35.0%
GGTAAAGATTATGCTTGACT+GGG + tig0021070:67101-67120 Msa1388480:CDS 35.0%
! ATATTAGGTAGGGGAGTTTT+AGG - tig0021070:67147-67166 None:intergenic 35.0%
TGTTGTTGCAAATGATATCG+AGG + tig0021070:67221-67240 Msa1388480:CDS 35.0%
! TTGTCCGACTTTGTAGTTTT+CGG + tig0021070:67318-67337 Msa1388480:intron 35.0%
TGAACCGAAAACTACAAAGT+CGG - tig0021070:67325-67344 None:intergenic 35.0%
GCAACTAAAATCCACTTCAA+TGG - tig0021070:67445-67464 None:intergenic 35.0%
! TTTGGTATAGAAAGCATGGA+AGG + tig0021070:67758-67777 Msa1388480:intron 35.0%
TTGAAGGGGATGAAAAAACA+TGG + tig0021070:68309-68328 Msa1388480:CDS 35.0%
GGGATGAAAAAACATGGAAA+GGG + tig0021070:68315-68334 Msa1388480:CDS 35.0%
!!! GGTTAAAGTATTTTTGGGCA+TGG - tig0021070:68401-68420 None:intergenic 35.0%
! CCATATCTTTCACATTTTGG+TGG - tig0021070:68422-68441 None:intergenic 35.0%
CCACCAAAATGTGAAAGATA+TGG + tig0021070:68419-68438 Msa1388480:CDS 35.0%
ATGTTTGCAGATTTAGCTAG+GGG - tig0021070:66272-66291 None:intergenic 35.0%
CATGTTTGCAGATTTAGCTA+GGG - tig0021070:66273-66292 None:intergenic 35.0%
!!! CTTTCGCTTTTTGCTCATTT+GGG - tig0021070:66300-66319 None:intergenic 35.0%
TTTCTTCGCTGAATTGAATG+AGG + tig0021070:66425-66444 Msa1388480:five_prime_UTR 35.0%
! AAATCTTTTCTGGACTACTG+AGG - tig0021070:66668-66687 None:intergenic 35.0%
TCTCTTCGTTAAAAGCTTCT+CGG + tig0021070:66766-66785 Msa1388480:five_prime_UTR 35.0%
GAGTCAATGTAATCCTTAAC+AGG - tig0021070:66944-66963 None:intergenic 35.0%
TAGACATGTTCTTCTTAGAC+AGG + tig0021070:66970-66989 Msa1388480:CDS 35.0%
ATATGAACGAACGACCAATA+AGG - tig0021070:67015-67034 None:intergenic 35.0%
TTATTGGTCGTTCGTTCATA+TGG + tig0021070:67014-67033 Msa1388480:intron 35.0%
! TTTATGTTGTAGGGTGTTCT+TGG + tig0021070:67072-67091 Msa1388480:intron 35.0%
AGGTAAAGATTATGCTTGAC+TGG + tig0021070:67100-67119 Msa1388480:CDS 35.0%
GGTAAAGATTATGCTTGACT+GGG + tig0021070:67101-67120 Msa1388480:CDS 35.0%
! ATATTAGGTAGGGGAGTTTT+AGG - tig0021070:67147-67166 None:intergenic 35.0%
TGTTGTTGCAAATGATATCG+AGG + tig0021070:67221-67240 Msa1388480:CDS 35.0%
! TTGTCCGACTTTGTAGTTTT+CGG + tig0021070:67318-67337 Msa1388480:intron 35.0%
TGAACCGAAAACTACAAAGT+CGG - tig0021070:67325-67344 None:intergenic 35.0%
GCAACTAAAATCCACTTCAA+TGG - tig0021070:67445-67464 None:intergenic 35.0%
! TTTGGTATAGAAAGCATGGA+AGG + tig0021070:67758-67777 Msa1388480:intron 35.0%
TTGAAGGGGATGAAAAAACA+TGG + tig0021070:68309-68328 Msa1388480:CDS 35.0%
GGGATGAAAAAACATGGAAA+GGG + tig0021070:68315-68334 Msa1388480:CDS 35.0%
!!! GGTTAAAGTATTTTTGGGCA+TGG - tig0021070:68401-68420 None:intergenic 35.0%
! CCATATCTTTCACATTTTGG+TGG - tig0021070:68422-68441 None:intergenic 35.0%
CCACCAAAATGTGAAAGATA+TGG + tig0021070:68419-68438 Msa1388480:CDS 35.0%
TGTTTGCAGATTTAGCTAGG+GGG - tig0021070:66271-66290 None:intergenic 40.0%
CCATGTTTGCAGATTTAGCT+AGG - tig0021070:66274-66293 None:intergenic 40.0%
CCTAGCTAAATCTGCAAACA+TGG + tig0021070:66271-66290 Msa1388480:five_prime_UTR 40.0%
!!! CCTTTCGCTTTTTGCTCATT+TGG - tig0021070:66301-66320 None:intergenic 40.0%
CCAAATGAGCAAAAAGCGAA+AGG + tig0021070:66298-66317 Msa1388480:five_prime_UTR 40.0%
CTTGCTGAAGATGGATATTC+CGG + tig0021070:66462-66481 Msa1388480:five_prime_UTR 40.0%
! ATATTCCGGTGTTGAGGTTA+GGG + tig0021070:66476-66495 Msa1388480:five_prime_UTR 40.0%
ATGATGATTTCAGTGCGCAT+GGG - tig0021070:66507-66526 None:intergenic 40.0%
TATGATTAGGTGAGAAGGGT+AGG + tig0021070:66626-66645 Msa1388480:intron 40.0%
ATGCCGAGAAAGTTAACAAC+AGG + tig0021070:66716-66735 Msa1388480:five_prime_UTR 40.0%
TGCCGAGAAAGTTAACAACA+GGG + tig0021070:66717-66736 Msa1388480:five_prime_UTR 40.0%
TCCCCTGTTGTTAACTTTCT+CGG - tig0021070:66722-66741 None:intergenic 40.0%
AAACCTTAAGACACCGTAAC+AGG - tig0021070:66812-66831 None:intergenic 40.0%
!! CGGTGTCTTAAGGTTTGTTA+TGG + tig0021070:66816-66835 Msa1388480:five_prime_UTR 40.0%
! TGTTATGGAAAGTGGTGCTA+AGG + tig0021070:66831-66850 Msa1388480:five_prime_UTR 40.0%
! GTTATGGAAAGTGGTGCTAA+GGG + tig0021070:66832-66851 Msa1388480:five_prime_UTR 40.0%
GTAATCCTTAACAGGTTGTC+CGG - tig0021070:66936-66955 None:intergenic 40.0%
! GTAGGGTGTTCTTGGTATTA+AGG + tig0021070:67080-67099 Msa1388480:intron 40.0%
TTAGGACCTTGCTTTCCTTT+AGG - tig0021070:67129-67148 None:intergenic 40.0%
TGTTACCATTCACACTCCAA+AGG + tig0021070:67167-67186 Msa1388480:CDS 40.0%
ATTCTCAAACAACAGGGACT+AGG - tig0021070:67254-67273 None:intergenic 40.0%
GTTCAATGTTTAAGTCCCTG+TGG + tig0021070:67340-67359 Msa1388480:CDS 40.0%
!! ATACCCAAAAAAGCACCACA+GGG - tig0021070:67358-67377 None:intergenic 40.0%
!! AATACCCAAAAAAGCACCAC+AGG - tig0021070:67359-67378 None:intergenic 40.0%
!!! TTTTTTGAGTAAACCGGGTG+AGG + tig0021070:67622-67641 Msa1388480:intron 40.0%
TGTTCCATGCTATGCTTAGA+GGG - tig0021070:67848-67867 None:intergenic 40.0%
TTGTTCCATGCTATGCTTAG+AGG - tig0021070:67849-67868 None:intergenic 40.0%
GAACAACAACAGGAGAAAAC+TGG + tig0021070:67863-67882 Msa1388480:CDS 40.0%
TGGCACCAATATCATTGAGT+CGG + tig0021070:67883-67902 Msa1388480:CDS 40.0%
GGGGATGAAAAAACATGGAA+AGG + tig0021070:68314-68333 Msa1388480:CDS 40.0%
TGTTTGCAGATTTAGCTAGG+GGG - tig0021070:66271-66290 None:intergenic 40.0%
CCATGTTTGCAGATTTAGCT+AGG - tig0021070:66274-66293 None:intergenic 40.0%
CCTAGCTAAATCTGCAAACA+TGG + tig0021070:66271-66290 Msa1388480:five_prime_UTR 40.0%
!!! CCTTTCGCTTTTTGCTCATT+TGG - tig0021070:66301-66320 None:intergenic 40.0%
CCAAATGAGCAAAAAGCGAA+AGG + tig0021070:66298-66317 Msa1388480:five_prime_UTR 40.0%
CTTGCTGAAGATGGATATTC+CGG + tig0021070:66462-66481 Msa1388480:five_prime_UTR 40.0%
! ATATTCCGGTGTTGAGGTTA+GGG + tig0021070:66476-66495 Msa1388480:five_prime_UTR 40.0%
ATGATGATTTCAGTGCGCAT+GGG - tig0021070:66507-66526 None:intergenic 40.0%
TATGATTAGGTGAGAAGGGT+AGG + tig0021070:66626-66645 Msa1388480:intron 40.0%
ATGCCGAGAAAGTTAACAAC+AGG + tig0021070:66716-66735 Msa1388480:five_prime_UTR 40.0%
TGCCGAGAAAGTTAACAACA+GGG + tig0021070:66717-66736 Msa1388480:five_prime_UTR 40.0%
TCCCCTGTTGTTAACTTTCT+CGG - tig0021070:66722-66741 None:intergenic 40.0%
AAACCTTAAGACACCGTAAC+AGG - tig0021070:66812-66831 None:intergenic 40.0%
!! CGGTGTCTTAAGGTTTGTTA+TGG + tig0021070:66816-66835 Msa1388480:five_prime_UTR 40.0%
! TGTTATGGAAAGTGGTGCTA+AGG + tig0021070:66831-66850 Msa1388480:five_prime_UTR 40.0%
! GTTATGGAAAGTGGTGCTAA+GGG + tig0021070:66832-66851 Msa1388480:five_prime_UTR 40.0%
GTAATCCTTAACAGGTTGTC+CGG - tig0021070:66936-66955 None:intergenic 40.0%
! GTAGGGTGTTCTTGGTATTA+AGG + tig0021070:67080-67099 Msa1388480:intron 40.0%
TTAGGACCTTGCTTTCCTTT+AGG - tig0021070:67129-67148 None:intergenic 40.0%
TGTTACCATTCACACTCCAA+AGG + tig0021070:67167-67186 Msa1388480:CDS 40.0%
ATTCTCAAACAACAGGGACT+AGG - tig0021070:67254-67273 None:intergenic 40.0%
GTTCAATGTTTAAGTCCCTG+TGG + tig0021070:67340-67359 Msa1388480:CDS 40.0%
!! ATACCCAAAAAAGCACCACA+GGG - tig0021070:67358-67377 None:intergenic 40.0%
!! AATACCCAAAAAAGCACCAC+AGG - tig0021070:67359-67378 None:intergenic 40.0%
!!! TTTTTTGAGTAAACCGGGTG+AGG + tig0021070:67622-67641 Msa1388480:intron 40.0%
TGTTCCATGCTATGCTTAGA+GGG - tig0021070:67848-67867 None:intergenic 40.0%
TTGTTCCATGCTATGCTTAG+AGG - tig0021070:67849-67868 None:intergenic 40.0%
GAACAACAACAGGAGAAAAC+TGG + tig0021070:67863-67882 Msa1388480:CDS 40.0%
TGGCACCAATATCATTGAGT+CGG + tig0021070:67883-67902 Msa1388480:CDS 40.0%
GGGGATGAAAAAACATGGAA+AGG + tig0021070:68314-68333 Msa1388480:CDS 40.0%
! AGATGGATATTCCGGTGTTG+AGG + tig0021070:66470-66489 Msa1388480:five_prime_UTR 45.0%
! GATATTCCGGTGTTGAGGTT+AGG + tig0021070:66475-66494 Msa1388480:five_prime_UTR 45.0%
AGTAACCCTAACCTCAACAC+CGG - tig0021070:66484-66503 None:intergenic 45.0%
GATGATGATTTCAGTGCGCA+TGG - tig0021070:66508-66527 None:intergenic 45.0%
! TACAGTTCAACACTGGTCTC+AGG - tig0021070:66697-66716 None:intergenic 45.0%
GCCGAGAAAGTTAACAACAG+GGG + tig0021070:66718-66737 Msa1388480:five_prime_UTR 45.0%
AAGAGACTCAGCTTGTGCAA+TGG - tig0021070:66752-66771 None:intergenic 45.0%
CTTCGTTAAAAGCTTCTCGG+TGG + tig0021070:66769-66788 Msa1388480:five_prime_UTR 45.0%
CGAACGACCAATAAGGTTGT+TGG - tig0021070:67008-67027 None:intergenic 45.0%
ATGCTTGACTGGGATCCTAA+AGG + tig0021070:67111-67130 Msa1388480:CDS 45.0%
TGGGATCCTAAAGGAAAGCA+AGG + tig0021070:67120-67139 Msa1388480:CDS 45.0%
TACCATTCACACTCCAAAGG+AGG + tig0021070:67170-67189 Msa1388480:CDS 45.0%
ATGTACTCTTCCTCCTCCTT+TGG - tig0021070:67186-67205 None:intergenic 45.0%
AAACAACAGGGACTAGGACA+GGG - tig0021070:67248-67267 None:intergenic 45.0%
!!! AAGTCCCTGTGGTGCTTTTT+TGG + tig0021070:67351-67370 Msa1388480:CDS 45.0%
!!! AGTCCCTGTGGTGCTTTTTT+GGG + tig0021070:67352-67371 Msa1388480:CDS 45.0%
TGCTATGCTTAGAGGGATCT+TGG - tig0021070:67841-67860 None:intergenic 45.0%
AGATCCCTCTAAGCATAGCA+TGG + tig0021070:67841-67860 Msa1388480:CDS 45.0%
GCATAGCATGGAACAACAAC+AGG + tig0021070:67853-67872 Msa1388480:CDS 45.0%
GGCACCAATATCATTGAGTC+GGG + tig0021070:67884-67903 Msa1388480:CDS 45.0%
ACCAATATCATTGAGTCGGG+TGG + tig0021070:67887-67906 Msa1388480:CDS 45.0%
ACCACCCGACTCAATGATAT+TGG - tig0021070:67891-67910 None:intergenic 45.0%
AAAGTCATGCCCCAAGGAAA+GGG + tig0021070:68002-68021 Msa1388480:CDS 45.0%
AAAAACATGGAAAGGGACGC+TGG + tig0021070:68322-68341 Msa1388480:CDS 45.0%
! AGATGGATATTCCGGTGTTG+AGG + tig0021070:66470-66489 Msa1388480:five_prime_UTR 45.0%
! GATATTCCGGTGTTGAGGTT+AGG + tig0021070:66475-66494 Msa1388480:five_prime_UTR 45.0%
AGTAACCCTAACCTCAACAC+CGG - tig0021070:66484-66503 None:intergenic 45.0%
GATGATGATTTCAGTGCGCA+TGG - tig0021070:66508-66527 None:intergenic 45.0%
! TACAGTTCAACACTGGTCTC+AGG - tig0021070:66697-66716 None:intergenic 45.0%
GCCGAGAAAGTTAACAACAG+GGG + tig0021070:66718-66737 Msa1388480:five_prime_UTR 45.0%
AAGAGACTCAGCTTGTGCAA+TGG - tig0021070:66752-66771 None:intergenic 45.0%
CTTCGTTAAAAGCTTCTCGG+TGG + tig0021070:66769-66788 Msa1388480:five_prime_UTR 45.0%
CGAACGACCAATAAGGTTGT+TGG - tig0021070:67008-67027 None:intergenic 45.0%
ATGCTTGACTGGGATCCTAA+AGG + tig0021070:67111-67130 Msa1388480:CDS 45.0%
TGGGATCCTAAAGGAAAGCA+AGG + tig0021070:67120-67139 Msa1388480:CDS 45.0%
TACCATTCACACTCCAAAGG+AGG + tig0021070:67170-67189 Msa1388480:CDS 45.0%
ATGTACTCTTCCTCCTCCTT+TGG - tig0021070:67186-67205 None:intergenic 45.0%
AAACAACAGGGACTAGGACA+GGG - tig0021070:67248-67267 None:intergenic 45.0%
!!! AAGTCCCTGTGGTGCTTTTT+TGG + tig0021070:67351-67370 Msa1388480:CDS 45.0%
!!! AGTCCCTGTGGTGCTTTTTT+GGG + tig0021070:67352-67371 Msa1388480:CDS 45.0%
TGCTATGCTTAGAGGGATCT+TGG - tig0021070:67841-67860 None:intergenic 45.0%
AGATCCCTCTAAGCATAGCA+TGG + tig0021070:67841-67860 Msa1388480:CDS 45.0%
GCATAGCATGGAACAACAAC+AGG + tig0021070:67853-67872 Msa1388480:CDS 45.0%
GGCACCAATATCATTGAGTC+GGG + tig0021070:67884-67903 Msa1388480:CDS 45.0%
ACCAATATCATTGAGTCGGG+TGG + tig0021070:67887-67906 Msa1388480:CDS 45.0%
ACCACCCGACTCAATGATAT+TGG - tig0021070:67891-67910 None:intergenic 45.0%
AAAGTCATGCCCCAAGGAAA+GGG + tig0021070:68002-68021 Msa1388480:CDS 45.0%
AAAAACATGGAAAGGGACGC+TGG + tig0021070:68322-68341 Msa1388480:CDS 45.0%
TTGCAGATTTAGCTAGGGGG+CGG - tig0021070:66268-66287 None:intergenic 50.0%
!! ACCAGAGAGCTTGCTGAAGA+TGG + tig0021070:66453-66472 Msa1388480:five_prime_UTR 50.0%
TCCATCTTCAGCAAGCTCTC+TGG - tig0021070:66457-66476 None:intergenic 50.0%
CCACTAACGGAGAACAGCTT+GGG - tig0021070:66544-66563 None:intergenic 50.0%
ACCACTAACGGAGAACAGCT+TGG - tig0021070:66545-66564 None:intergenic 50.0%
GATTAGGTGAGAAGGGTAGG+AGG + tig0021070:66629-66648 Msa1388480:intron 50.0%
CTCGGCATACAGTTCAACAC+TGG - tig0021070:66704-66723 None:intergenic 50.0%
GAGCCTGTTACGGTGTCTTA+AGG + tig0021070:66806-66825 Msa1388480:five_prime_UTR 50.0%
GGCTGTGAGGTTATTGTCAG+TGG + tig0021070:66853-66872 Msa1388480:five_prime_UTR 50.0%
GACGGGTATATGATCTCGTC+CGG + tig0021070:66914-66933 Msa1388480:CDS 50.0%
!! CTCCTCCTTTGGAGTGTGAA+TGG - tig0021070:67175-67194 None:intergenic 50.0%
CATTCACACTCCAAAGGAGG+AGG + tig0021070:67173-67192 Msa1388480:CDS 50.0%
! AGGAGGAGGAAGAGTACATC+AGG + tig0021070:67187-67206 Msa1388480:CDS 50.0%
TTTGCAACAACAGCAGCAGC+AGG - tig0021070:67213-67232 None:intergenic 50.0%
CAAACAACAGGGACTAGGAC+AGG - tig0021070:67249-67268 None:intergenic 50.0%
TGAGTAAACCGGGTGAGGAT+AGG + tig0021070:67627-67646 Msa1388480:intron 50.0%
GAGTAAACCGGGTGAGGATA+GGG + tig0021070:67628-67647 Msa1388480:intron 50.0%
TCTTAGTCCCTATCCTCACC+CGG - tig0021070:67638-67657 None:intergenic 50.0%
CTTGGGGCATGACTTTCTTC+TGG - tig0021070:67998-68017 None:intergenic 50.0%
CAGAAGAAAGTCATGCCCCA+AGG + tig0021070:67996-68015 Msa1388480:CDS 50.0%
GAAAGTCATGCCCCAAGGAA+AGG + tig0021070:68001-68020 Msa1388480:CDS 50.0%
TGTCCAATGCCCTTTCCTTG+GGG - tig0021070:68014-68033 None:intergenic 50.0%
CTGTCCAATGCCCTTTCCTT+GGG - tig0021070:68015-68034 None:intergenic 50.0%
TCTGTCCAATGCCCTTTCCT+TGG - tig0021070:68016-68035 None:intergenic 50.0%
!! AAGGAAAGGGCATTGGACAG+AGG + tig0021070:68015-68034 Msa1388480:CDS 50.0%
GCATGGCTAGCAACTTGAGT+TGG - tig0021070:68384-68403 None:intergenic 50.0%
TTGCAGATTTAGCTAGGGGG+CGG - tig0021070:66268-66287 None:intergenic 50.0%
!! ACCAGAGAGCTTGCTGAAGA+TGG + tig0021070:66453-66472 Msa1388480:five_prime_UTR 50.0%
TCCATCTTCAGCAAGCTCTC+TGG - tig0021070:66457-66476 None:intergenic 50.0%
CCACTAACGGAGAACAGCTT+GGG - tig0021070:66544-66563 None:intergenic 50.0%
ACCACTAACGGAGAACAGCT+TGG - tig0021070:66545-66564 None:intergenic 50.0%
GATTAGGTGAGAAGGGTAGG+AGG + tig0021070:66629-66648 Msa1388480:intron 50.0%
CTCGGCATACAGTTCAACAC+TGG - tig0021070:66704-66723 None:intergenic 50.0%
GAGCCTGTTACGGTGTCTTA+AGG + tig0021070:66806-66825 Msa1388480:five_prime_UTR 50.0%
GGCTGTGAGGTTATTGTCAG+TGG + tig0021070:66853-66872 Msa1388480:five_prime_UTR 50.0%
GACGGGTATATGATCTCGTC+CGG + tig0021070:66914-66933 Msa1388480:CDS 50.0%
!! CTCCTCCTTTGGAGTGTGAA+TGG - tig0021070:67175-67194 None:intergenic 50.0%
CATTCACACTCCAAAGGAGG+AGG + tig0021070:67173-67192 Msa1388480:CDS 50.0%
! AGGAGGAGGAAGAGTACATC+AGG + tig0021070:67187-67206 Msa1388480:CDS 50.0%
TTTGCAACAACAGCAGCAGC+AGG - tig0021070:67213-67232 None:intergenic 50.0%
CAAACAACAGGGACTAGGAC+AGG - tig0021070:67249-67268 None:intergenic 50.0%
TGAGTAAACCGGGTGAGGAT+AGG + tig0021070:67627-67646 Msa1388480:intron 50.0%
GAGTAAACCGGGTGAGGATA+GGG + tig0021070:67628-67647 Msa1388480:intron 50.0%
TCTTAGTCCCTATCCTCACC+CGG - tig0021070:67638-67657 None:intergenic 50.0%
CTTGGGGCATGACTTTCTTC+TGG - tig0021070:67998-68017 None:intergenic 50.0%
CAGAAGAAAGTCATGCCCCA+AGG + tig0021070:67996-68015 Msa1388480:CDS 50.0%
GAAAGTCATGCCCCAAGGAA+AGG + tig0021070:68001-68020 Msa1388480:CDS 50.0%
TGTCCAATGCCCTTTCCTTG+GGG - tig0021070:68014-68033 None:intergenic 50.0%
CTGTCCAATGCCCTTTCCTT+GGG - tig0021070:68015-68034 None:intergenic 50.0%
TCTGTCCAATGCCCTTTCCT+TGG - tig0021070:68016-68035 None:intergenic 50.0%
!! AAGGAAAGGGCATTGGACAG+AGG + tig0021070:68015-68034 Msa1388480:CDS 50.0%
GCATGGCTAGCAACTTGAGT+TGG - tig0021070:68384-68403 None:intergenic 50.0%
GTGTTGCAGTTCGTCGCTGA+CGG + tig0021070:66399-66418 Msa1388480:intron 55.0%
CCCAAGCTGTTCTCCGTTAG+TGG + tig0021070:66541-66560 Msa1388480:intron 55.0%
GCTGTTCGCAGAGCCTGTTA+CGG + tig0021070:66796-66815 Msa1388480:five_prime_UTR 55.0%
! AAGTGGTGCTAAGGGCTGTG+AGG + tig0021070:66840-66859 Msa1388480:five_prime_UTR 55.0%
CTCGTCCGGACAACCTGTTA+AGG + tig0021070:66928-66947 Msa1388480:CDS 55.0%
GAGGGATCTTGGACTGAAGC+CGG - tig0021070:67830-67849 None:intergenic 55.0%
! ATGCCCCAAGGAAAGGGCAT+TGG + tig0021070:68008-68027 Msa1388480:CDS 55.0%
GTGTTGCAGTTCGTCGCTGA+CGG + tig0021070:66399-66418 Msa1388480:intron 55.0%
CCCAAGCTGTTCTCCGTTAG+TGG + tig0021070:66541-66560 Msa1388480:intron 55.0%
GCTGTTCGCAGAGCCTGTTA+CGG + tig0021070:66796-66815 Msa1388480:five_prime_UTR 55.0%
! AAGTGGTGCTAAGGGCTGTG+AGG + tig0021070:66840-66859 Msa1388480:five_prime_UTR 55.0%
CTCGTCCGGACAACCTGTTA+AGG + tig0021070:66928-66947 Msa1388480:CDS 55.0%
GAGGGATCTTGGACTGAAGC+CGG - tig0021070:67830-67849 None:intergenic 55.0%
! ATGCCCCAAGGAAAGGGCAT+TGG + tig0021070:68008-68027 Msa1388480:CDS 55.0%
Chromosome Type Strat End Strand Name
tig0021070 gene 66183 68521 66183 ID=Msa1388480;Name=Msa1388480
tig0021070 mRNA 66183 68521 66183 ID=Msa1388480-mRNA-1;Parent=Msa1388480;Name=Msa1388480-mRNA-1;_AED=0.13;_eAED=0.13;_QI=552|0.5|0.42|1|0.66|0.57|7|0|262
tig0021070 exon 66183 66319 66183 ID=Msa1388480-mRNA-1:exon:11119;Parent=Msa1388480-mRNA-1
tig0021070 exon 66408 66555 66408 ID=Msa1388480-mRNA-1:exon:11120;Parent=Msa1388480-mRNA-1
tig0021070 exon 66635 66991 66635 ID=Msa1388480-mRNA-1:exon:11121;Parent=Msa1388480-mRNA-1
tig0021070 exon 67084 67242 67084 ID=Msa1388480-mRNA-1:exon:11122;Parent=Msa1388480-mRNA-1
tig0021070 exon 67334 67373 67334 ID=Msa1388480-mRNA-1:exon:11123;Parent=Msa1388480-mRNA-1
tig0021070 exon 67768 68047 67768 ID=Msa1388480-mRNA-1:exon:11124;Parent=Msa1388480-mRNA-1
tig0021070 exon 68302 68521 68302 ID=Msa1388480-mRNA-1:exon:11125;Parent=Msa1388480-mRNA-1
tig0021070 five_prime_UTR 66183 66319 66183 ID=Msa1388480-mRNA-1:five_prime_utr;Parent=Msa1388480-mRNA-1
tig0021070 five_prime_UTR 66408 66555 66408 ID=Msa1388480-mRNA-1:five_prime_utr;Parent=Msa1388480-mRNA-1
tig0021070 five_prime_UTR 66635 66901 66635 ID=Msa1388480-mRNA-1:five_prime_utr;Parent=Msa1388480-mRNA-1
tig0021070 CDS 66902 66991 66902 ID=Msa1388480-mRNA-1:cds;Parent=Msa1388480-mRNA-1
tig0021070 CDS 67084 67242 67084 ID=Msa1388480-mRNA-1:cds;Parent=Msa1388480-mRNA-1
tig0021070 CDS 67334 67373 67334 ID=Msa1388480-mRNA-1:cds;Parent=Msa1388480-mRNA-1
tig0021070 CDS 67768 68047 67768 ID=Msa1388480-mRNA-1:cds;Parent=Msa1388480-mRNA-1
tig0021070 CDS 68302 68521 68302 ID=Msa1388480-mRNA-1:cds;Parent=Msa1388480-mRNA-1
Gene Sequence

>Msa1388480

ATGAAATTTAAGGACGGGTATATGATCTCGTCCGGACAACCTGTTAAGGATTACATTGACTCTGCTGTTAGACATGTTCTTCTTAGACAGGGTGTTCTTGGTATTAAGGTAAAGATTATGCTTGACTGGGATCCTAAAGGAAAGCAAGGTCCTAAAACTCCCCTACCTAATATTGTTACCATTCACACTCCAAAGGAGGAGGAAGAGTACATCAGGCCTGCTGCTGCTGTTGTTGCAAATGATATCGAGTTTTCGGTTCAATGTTTAAGTCCCTGTGGTGCTTTTTTGGAAAGCATGGAAGGAAGAAAAAGTATACAATCATCCCTCCTTCAAATTGATTTAAATGAGCCGGCTTCAGTCCAAGATCCCTCTAAGCATAGCATGGAACAACAACAGGAGAAAACTGGCACCAATATCATTGAGTCGGGTGGTGCCGTTGCAATTCTAAACTCTAATGATAATAACGTCACAACTCTAAACTCTGATGAAAATAACTTAATTCAAGCTGAGTCAGTACCAGAAGAAAGTCATGCCCCAAGGAAAGGGCATTGGACAGAGGATGAACACAAGTTGTTTTTGAAGGGGATGAAAAAACATGGAAAGGGACGCTGGAAAAATATTTCAAAAGAATTTGTGGTGACAAAAACTCCAACTCAAGTTGCTAGCCATGCCCAAAAATACTTTAACCACCAAAATGTGAAAGATATGGAAAAGAAGGAGAAAAAAAGAAAAAGTATTCACGACACAACCTTAAACAAGAATGACACATTGGTCACTAATGTATTTTAA
Protein sequence

>Msa1388480

MKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPKTPLPNIVTIHTPKEEEEYIRPAAAVVANDIEFSVQCLSPCGAFLESMEGRKSIQSSLLQIDLNEPASVQDPSKHSMEQQQEKTGTNIIESGGAVAILNSNDNNVTTLNSDENNLIQAESVPEESHAPRKGHWTEDEHKLFLKGMKKHGKGRWKNISKEFVVTKTPTQVASHAQKYFNHQNVKDMEKKEKKRKSIHDTTLNKNDTLVTNVF*