Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1395990 | XP_003624830.2 | 74.638 | 276 | 12 | 4 | 1 | 219 | 1 | 275 | 8.58e-128 | 372 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1395990 | sp|Q9SJW0|PHL7_ARATH | 37.255 | 255 | 72 | 8 | 27 | 210 | 3 | 240 | 2.51e-32 | 121 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1395990 | G7L3R4 | 74.638 | 276 | 12 | 4 | 1 | 219 | 1 | 275 | 4.10e-128 | 372 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1395990 | TF | GARP-G2-like |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1395990 | MtrunA17_Chr7g0254981 | 73.571 | 280 | 12 | 4 | 1 | 219 | 1 | 279 | 7.12e-131 | 369 |
| Msa1395990 | MtrunA17_Chr2g0291021 | 39.594 | 197 | 42 | 5 | 1 | 129 | 1 | 188 | 2.61e-32 | 119 |
| Msa1395990 | MtrunA17_Chr5g0409731 | 78.431 | 51 | 11 | 0 | 48 | 98 | 25 | 75 | 1.61e-24 | 98.2 |
| Msa1395990 | MtrunA17_Chr2g0310011 | 76.471 | 51 | 12 | 0 | 48 | 98 | 35 | 85 | 2.01e-22 | 93.6 |
| Msa1395990 | MtrunA17_Chr8g0356501 | 74.510 | 51 | 13 | 0 | 48 | 98 | 37 | 87 | 6.43e-22 | 92.0 |
| Msa1395990 | MtrunA17_Chr1g0197171 | 72.549 | 51 | 14 | 0 | 48 | 98 | 44 | 94 | 2.22e-21 | 89.7 |
| Msa1395990 | MtrunA17_Chr5g0417521 | 67.308 | 52 | 17 | 0 | 47 | 98 | 14 | 65 | 2.60e-21 | 90.5 |
| Msa1395990 | MtrunA17_Chr7g0261911 | 36.774 | 155 | 38 | 3 | 31 | 125 | 241 | 395 | 3.98e-21 | 90.9 |
| Msa1395990 | MtrunA17_Chr6g0461641 | 67.308 | 52 | 17 | 0 | 47 | 98 | 41 | 92 | 4.01e-21 | 90.5 |
| Msa1395990 | MtrunA17_Chr4g0042451 | 67.308 | 52 | 17 | 0 | 47 | 98 | 16 | 67 | 8.77e-21 | 89.0 |
| Msa1395990 | MtrunA17_Chr2g0290991 | 70.588 | 51 | 15 | 0 | 48 | 98 | 39 | 89 | 1.01e-20 | 88.2 |
| Msa1395990 | MtrunA17_Chr2g0321461 | 65.385 | 52 | 18 | 0 | 47 | 98 | 44 | 95 | 2.95e-20 | 87.8 |
| Msa1395990 | MtrunA17_Chr1g0175091 | 33.553 | 152 | 39 | 3 | 31 | 128 | 249 | 392 | 4.81e-19 | 84.7 |
| Msa1395990 | MtrunA17_Chr1g0190301 | 67.308 | 52 | 17 | 0 | 47 | 98 | 174 | 225 | 9.81e-19 | 83.6 |
| Msa1395990 | MtrunA17_Chr7g0258551 | 44.000 | 100 | 52 | 3 | 46 | 141 | 210 | 309 | 1.04e-18 | 83.6 |
| Msa1395990 | MtrunA17_Chr7g0274471 | 50.000 | 80 | 37 | 1 | 48 | 124 | 218 | 297 | 2.37e-18 | 82.8 |
| Msa1395990 | MtrunA17_Chr2g0288601 | 63.333 | 60 | 22 | 0 | 40 | 99 | 63 | 122 | 4.76e-18 | 77.0 |
| Msa1395990 | MtrunA17_Chr7g0242521 | 51.389 | 72 | 32 | 1 | 48 | 116 | 13 | 84 | 5.48e-17 | 77.0 |
| Msa1395990 | MtrunA17_Chr7g0243081 | 43.820 | 89 | 41 | 1 | 22 | 101 | 36 | 124 | 8.74e-17 | 77.8 |
| Msa1395990 | MtrunA17_Chr1g0175071 | 57.407 | 54 | 23 | 0 | 45 | 98 | 174 | 227 | 1.42e-16 | 77.0 |
| Msa1395990 | MtrunA17_Chr8g0379121 | 43.617 | 94 | 48 | 2 | 50 | 140 | 113 | 204 | 6.83e-16 | 75.9 |
| Msa1395990 | MtrunA17_Chr1g0175081 | 44.776 | 67 | 36 | 1 | 50 | 115 | 24 | 90 | 8.52e-16 | 70.5 |
| Msa1395990 | MtrunA17_Chr6g0479431 | 58.182 | 55 | 23 | 0 | 50 | 104 | 204 | 258 | 1.12e-15 | 74.7 |
| Msa1395990 | MtrunA17_Chr8g0366281 | 55.357 | 56 | 25 | 0 | 50 | 105 | 175 | 230 | 4.89e-15 | 72.8 |
| Msa1395990 | MtrunA17_Chr1g0210911 | 53.968 | 63 | 29 | 0 | 50 | 112 | 24 | 86 | 5.98e-15 | 72.4 |
| Msa1395990 | MtrunA17_Chr2g0320231 | 63.462 | 52 | 19 | 0 | 50 | 101 | 99 | 150 | 7.36e-15 | 72.4 |
| Msa1395990 | MtrunA17_Chr3g0109981 | 58.182 | 55 | 23 | 0 | 50 | 104 | 276 | 330 | 1.52e-14 | 72.0 |
| Msa1395990 | MtrunA17_Chr1g0162931 | 60.000 | 55 | 22 | 0 | 50 | 104 | 20 | 74 | 2.35e-14 | 70.5 |
| Msa1395990 | MtrunA17_Chr5g0410741 | 56.364 | 55 | 24 | 0 | 50 | 104 | 221 | 275 | 2.97e-14 | 70.9 |
| Msa1395990 | MtrunA17_Chr3g0095611 | 43.056 | 72 | 41 | 0 | 33 | 104 | 4 | 75 | 3.28e-14 | 68.9 |
| Msa1395990 | MtrunA17_Chr2g0283951 | 59.259 | 54 | 22 | 0 | 50 | 103 | 91 | 144 | 4.05e-14 | 70.5 |
| Msa1395990 | MtrunA17_Chr1g0154261 | 54.545 | 55 | 25 | 0 | 50 | 104 | 128 | 182 | 5.54e-14 | 69.3 |
| Msa1395990 | MtrunA17_Chr7g0258531 | 38.776 | 98 | 50 | 2 | 48 | 136 | 213 | 309 | 9.69e-13 | 66.2 |
| Msa1395990 | MtrunA17_Chr1g0198601 | 58.824 | 51 | 21 | 0 | 48 | 98 | 211 | 261 | 1.18e-11 | 63.2 |
| Msa1395990 | MtrunA17_Chr4g0009991 | 35.185 | 108 | 59 | 3 | 2 | 99 | 11 | 117 | 1.58e-11 | 59.7 |
| Msa1395990 | MtrunA17_Chr5g0402631 | 42.000 | 100 | 44 | 3 | 48 | 147 | 214 | 299 | 1.77e-11 | 62.8 |
| Msa1395990 | MtrunA17_Chr4g0009901 | 47.458 | 59 | 30 | 1 | 40 | 98 | 160 | 217 | 2.85e-11 | 61.6 |
| Msa1395990 | MtrunA17_Chr4g0045361 | 41.772 | 79 | 46 | 0 | 40 | 118 | 266 | 344 | 3.16e-11 | 62.0 |
| Msa1395990 | MtrunA17_Chr4g0009981 | 52.830 | 53 | 24 | 1 | 46 | 98 | 114 | 165 | 5.69e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1395990 | AT2G01060.1 | 37.255 | 255 | 72 | 8 | 27 | 210 | 3 | 240 | 2.55e-33 | 121 |
| Msa1395990 | AT4G13640.1 | 76.471 | 51 | 12 | 0 | 48 | 98 | 37 | 87 | 9.20e-24 | 96.7 |
| Msa1395990 | AT4G13640.2 | 76.471 | 51 | 12 | 0 | 48 | 98 | 37 | 87 | 1.04e-23 | 96.7 |
| Msa1395990 | AT3G24120.1 | 74.510 | 51 | 13 | 0 | 48 | 98 | 41 | 91 | 4.46e-23 | 94.7 |
| Msa1395990 | AT3G24120.2 | 74.510 | 51 | 13 | 0 | 48 | 98 | 41 | 91 | 4.62e-23 | 94.7 |
| Msa1395990 | AT3G12730.1 | 72.549 | 51 | 14 | 0 | 48 | 98 | 23 | 73 | 1.17e-22 | 92.4 |
| Msa1395990 | AT1G79430.2 | 40.458 | 131 | 19 | 2 | 48 | 119 | 34 | 164 | 1.73e-22 | 94.4 |
| Msa1395990 | AT3G04450.1 | 34.010 | 197 | 57 | 5 | 42 | 171 | 231 | 421 | 2.82e-22 | 94.4 |
| Msa1395990 | AT3G04450.4 | 35.393 | 178 | 49 | 4 | 42 | 159 | 191 | 362 | 3.05e-22 | 94.0 |
| Msa1395990 | AT3G04450.2 | 35.393 | 178 | 49 | 4 | 42 | 159 | 191 | 362 | 3.05e-22 | 94.0 |
| Msa1395990 | AT5G45580.2 | 58.667 | 75 | 23 | 2 | 27 | 98 | 4 | 73 | 9.27e-22 | 90.9 |
| Msa1395990 | AT5G45580.1 | 72.549 | 51 | 14 | 0 | 48 | 98 | 7 | 57 | 1.05e-21 | 90.5 |
| Msa1395990 | AT4G28610.1 | 40.000 | 135 | 24 | 2 | 44 | 121 | 221 | 355 | 1.39e-21 | 92.0 |
| Msa1395990 | AT3G04030.1 | 65.385 | 52 | 18 | 0 | 47 | 98 | 44 | 95 | 6.37e-21 | 90.1 |
| Msa1395990 | AT5G29000.2 | 35.616 | 146 | 35 | 2 | 38 | 124 | 221 | 366 | 7.50e-21 | 90.1 |
| Msa1395990 | AT5G29000.1 | 34.641 | 153 | 41 | 2 | 38 | 131 | 178 | 330 | 7.71e-21 | 89.7 |
| Msa1395990 | AT5G29000.3 | 34.641 | 153 | 41 | 2 | 38 | 131 | 178 | 330 | 7.71e-21 | 89.7 |
| Msa1395990 | AT3G04030.3 | 65.385 | 52 | 18 | 0 | 47 | 98 | 44 | 95 | 7.81e-21 | 90.1 |
| Msa1395990 | AT1G69580.1 | 63.462 | 52 | 19 | 0 | 47 | 98 | 33 | 84 | 1.02e-20 | 89.0 |
| Msa1395990 | AT1G69580.2 | 63.462 | 52 | 19 | 0 | 47 | 98 | 33 | 84 | 1.15e-20 | 89.0 |
| Msa1395990 | AT5G18240.2 | 67.308 | 52 | 17 | 0 | 47 | 98 | 44 | 95 | 1.34e-20 | 89.4 |
| Msa1395990 | AT5G18240.3 | 67.308 | 52 | 17 | 0 | 47 | 98 | 44 | 95 | 1.34e-20 | 89.4 |
| Msa1395990 | AT5G18240.5 | 67.308 | 52 | 17 | 0 | 47 | 98 | 44 | 95 | 1.52e-20 | 89.4 |
| Msa1395990 | AT5G18240.1 | 67.308 | 52 | 17 | 0 | 47 | 98 | 44 | 95 | 1.57e-20 | 89.4 |
| Msa1395990 | AT5G18240.4 | 67.308 | 52 | 17 | 0 | 47 | 98 | 44 | 95 | 1.57e-20 | 89.4 |
| Msa1395990 | AT3G13040.3 | 33.974 | 156 | 42 | 2 | 43 | 137 | 236 | 391 | 2.47e-20 | 89.0 |
| Msa1395990 | AT3G13040.1 | 33.974 | 156 | 42 | 2 | 43 | 137 | 236 | 391 | 2.47e-20 | 89.0 |
| Msa1395990 | AT3G13040.2 | 33.974 | 156 | 42 | 2 | 43 | 137 | 236 | 391 | 2.47e-20 | 89.0 |
| Msa1395990 | AT5G29000.4 | 45.977 | 87 | 41 | 1 | 38 | 118 | 221 | 307 | 6.25e-20 | 86.7 |
| Msa1395990 | AT3G04450.3 | 67.308 | 52 | 17 | 0 | 47 | 98 | 237 | 288 | 1.25e-19 | 85.9 |
| Msa1395990 | AT4G04605.1 | 56.716 | 67 | 29 | 0 | 50 | 116 | 16 | 82 | 1.73e-18 | 80.9 |
| Msa1395990 | AT3G04030.2 | 63.462 | 52 | 18 | 1 | 47 | 98 | 44 | 94 | 2.21e-18 | 83.2 |
| Msa1395990 | AT5G06800.3 | 51.562 | 64 | 31 | 0 | 47 | 110 | 191 | 254 | 2.64e-17 | 79.0 |
| Msa1395990 | AT2G20400.1 | 42.574 | 101 | 51 | 1 | 48 | 141 | 231 | 331 | 2.78e-17 | 80.1 |
| Msa1395990 | AT5G06800.2 | 48.529 | 68 | 35 | 0 | 47 | 114 | 191 | 258 | 2.95e-17 | 79.7 |
| Msa1395990 | AT2G20400.2 | 42.157 | 102 | 51 | 1 | 48 | 141 | 231 | 332 | 3.49e-17 | 79.7 |
| Msa1395990 | AT2G06020.1 | 53.623 | 69 | 28 | 2 | 33 | 98 | 69 | 136 | 3.51e-17 | 79.0 |
| Msa1395990 | AT5G06800.1 | 34.307 | 137 | 35 | 2 | 47 | 128 | 191 | 327 | 3.56e-17 | 79.7 |
| Msa1395990 | AT2G02060.2 | 54.167 | 72 | 33 | 0 | 30 | 101 | 11 | 82 | 3.74e-17 | 78.2 |
| Msa1395990 | AT2G02060.1 | 54.167 | 72 | 33 | 0 | 30 | 101 | 11 | 82 | 3.74e-17 | 78.2 |
| Msa1395990 | AT2G42660.1 | 43.011 | 93 | 43 | 1 | 39 | 121 | 41 | 133 | 9.50e-17 | 77.0 |
| Msa1395990 | AT2G40260.1 | 56.452 | 62 | 27 | 0 | 40 | 101 | 74 | 135 | 1.22e-16 | 78.2 |
| Msa1395990 | AT2G38300.1 | 49.333 | 75 | 36 | 1 | 40 | 114 | 46 | 118 | 1.38e-15 | 74.7 |
| Msa1395990 | AT1G14600.1 | 50.000 | 72 | 36 | 0 | 30 | 101 | 5 | 76 | 1.14e-14 | 71.2 |
| Msa1395990 | AT5G16560.1 | 58.182 | 55 | 23 | 0 | 50 | 104 | 221 | 275 | 1.20e-14 | 72.4 |
| Msa1395990 | AT5G42630.2 | 56.364 | 55 | 24 | 0 | 50 | 104 | 107 | 161 | 1.23e-14 | 70.5 |
| Msa1395990 | AT5G42630.1 | 56.364 | 55 | 24 | 0 | 50 | 104 | 107 | 161 | 1.72e-14 | 71.2 |
| Msa1395990 | AT1G32240.1 | 56.364 | 55 | 24 | 0 | 50 | 104 | 215 | 269 | 2.35e-14 | 71.6 |
| Msa1395990 | AT1G32240.2 | 56.364 | 55 | 24 | 0 | 50 | 104 | 215 | 269 | 2.41e-14 | 71.2 |
| Msa1395990 | AT4G17695.1 | 54.545 | 55 | 25 | 0 | 50 | 104 | 166 | 220 | 8.28e-14 | 69.7 |
| Msa1395990 | AT4G04580.1 | 55.769 | 52 | 23 | 0 | 50 | 101 | 16 | 67 | 1.75e-13 | 66.2 |
| Msa1395990 | AT3G25790.2 | 53.704 | 54 | 25 | 0 | 53 | 106 | 201 | 254 | 2.91e-12 | 64.7 |
| Msa1395990 | AT1G13300.1 | 58.182 | 55 | 23 | 0 | 44 | 98 | 177 | 231 | 3.39e-12 | 65.1 |
| Msa1395990 | AT4G37180.3 | 56.604 | 53 | 23 | 0 | 48 | 100 | 210 | 262 | 4.44e-12 | 64.3 |
| Msa1395990 | AT1G25550.2 | 46.269 | 67 | 36 | 0 | 48 | 114 | 209 | 275 | 2.31e-11 | 62.4 |
| Msa1395990 | AT1G49560.2 | 57.895 | 57 | 24 | 0 | 48 | 104 | 192 | 248 | 2.50e-11 | 62.0 |
| Msa1395990 | AT4G37180.1 | 56.863 | 51 | 22 | 0 | 48 | 98 | 210 | 260 | 3.10e-11 | 62.4 |
| Msa1395990 | AT4G37180.2 | 56.863 | 51 | 22 | 0 | 48 | 98 | 217 | 267 | 3.38e-11 | 62.4 |
Find 79 sgRNAs with CRISPR-Local
Find 382 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAAAGAGAGAGAGAAAAT+AGG | 0.236678 | tig0021982:+24372 | None:intergenic |
| CAGCCCCTATCAGAGCCTTC+TGG | 0.281442 | tig0021982:-20056 | Msa1395990:CDS |
| TCATGTTAAAAGCCATTTAC+AGG | 0.288705 | tig0021982:-21461 | Msa1395990:intron |
| GGGTCTAGTGATGCCCTTGC+AGG | 0.311416 | tig0021982:-20035 | Msa1395990:CDS |
| CACATATTGATACCTGTAAA+TGG | 0.320680 | tig0021982:+21449 | None:intergenic |
| AGTGAAACTTGTTAATATCT+TGG | 0.325989 | tig0021982:+19449 | None:intergenic |
| AAATTGAAGCATTCAGAATC+TGG | 0.331873 | tig0021982:+24330 | None:intergenic |
| TGCTGGCTATGGATTTGATT+TGG | 0.352915 | tig0021982:-19874 | Msa1395990:CDS |
| AGAAAGAGAGAGAGAAAATA+GGG | 0.356544 | tig0021982:+24373 | None:intergenic |
| GTATCATGCAAAGAAGTTTC+CGG | 0.366560 | tig0021982:-24110 | Msa1395990:CDS |
| GCATCATCTTCATACAAGTT+TGG | 0.368079 | tig0021982:+19894 | None:intergenic |
| TAGACCCAGAAGGCTCTGAT+AGG | 0.397855 | tig0021982:+20051 | None:intergenic |
| CTGTCATCATTTATTATGTT+CGG | 0.397892 | tig0021982:-19579 | Msa1395990:three_prime_UTR |
| ATCACTCTCAAAACACCTTT+CGG | 0.400760 | tig0021982:+21508 | None:intergenic |
| GAGCAATCTTTCTTGTAACT+TGG | 0.405233 | tig0021982:+19949 | None:intergenic |
| TGATTGTAATGTTGGTCCTT+TGG | 0.407688 | tig0021982:-19919 | Msa1395990:CDS |
| TTGAGAGTGATGGGTGTGCC+TGG | 0.439476 | tig0021982:-21496 | Msa1395990:CDS |
| GTCGATGCTATTACGCAGCT+TGG | 0.451599 | tig0021982:-23929 | Msa1395990:CDS |
| AGCAATCTTTCTTGTAACTT+GGG | 0.461914 | tig0021982:+19950 | None:intergenic |
| GTGAACAGTTTGCAAATGGT+GGG | 0.466595 | tig0021982:-24045 | Msa1395990:CDS |
| TCTACATTAATATATACAAA+TGG | 0.467748 | tig0021982:+19727 | None:intergenic |
| AAATCTCAAGGCGGTGGTGG+TGG | 0.477044 | tig0021982:-24067 | Msa1395990:CDS |
| AGCCCCTATCAGAGCCTTCT+GGG | 0.481660 | tig0021982:-20055 | Msa1395990:CDS |
| GCGTAATAGCATCGACAAAA+CGG | 0.482228 | tig0021982:+23936 | None:intergenic |
| CTTCTGCAAGTATTTACCCT+GGG | 0.483213 | tig0021982:+20157 | None:intergenic |
| GGTGAACAGTTTGCAAATGG+TGG | 0.483332 | tig0021982:-24046 | Msa1395990:CDS |
| GTTCAACCTGCTGGAGGTGG+TGG | 0.495717 | tig0021982:-23995 | Msa1395990:CDS |
| TATGAAGATGATGCTGGCTA+TGG | 0.495754 | tig0021982:-19885 | Msa1395990:CDS |
| ATATATACAAATGGATTGCA+TGG | 0.506158 | tig0021982:+19736 | None:intergenic |
| TGTAGCATCATCGTCTCCTC+CGG | 0.509828 | tig0021982:+24091 | None:intergenic |
| AGACCCAGAAGGCTCTGATA+GGG | 0.512319 | tig0021982:+20052 | None:intergenic |
| CAGAAGGCTCTGATAGGGGC+TGG | 0.517321 | tig0021982:+20057 | None:intergenic |
| TGCTTCCCACCACCTCCAGC+AGG | 0.519989 | tig0021982:+23989 | None:intergenic |
| GTGGGAAGCAGCGTTTGCGT+TGG | 0.522000 | tig0021982:-23976 | Msa1395990:CDS |
| GATGCTATTACGCAGCTTGG+TGG | 0.523773 | tig0021982:-23926 | Msa1395990:CDS |
| GTAATGAGATTGAGGATTAG+TGG | 0.525216 | tig0021982:+24417 | None:intergenic |
| GAGAATTGATGAAGGTTCAA+AGG | 0.527042 | tig0021982:-19988 | Msa1395990:CDS |
| AGGTAGTACCTTGGCAGCAT+CGG | 0.527216 | tig0021982:-20111 | Msa1395990:CDS |
| CAGAAGAATGATTGTAATGT+TGG | 0.531455 | tig0021982:-19927 | Msa1395990:CDS |
| ACAAATGAGAATTGAAGCCC+AGG | 0.536357 | tig0021982:-20174 | Msa1395990:CDS |
| GAACAGTTTGCAAATGGTGG+GGG | 0.537010 | tig0021982:-24043 | Msa1395990:CDS |
| CATAAATCTCAAGGCGGTGG+TGG | 0.541663 | tig0021982:-24070 | Msa1395990:CDS |
| ATAGAGGAACAGCAGAAACT+AGG | 0.544970 | tig0021982:-20131 | Msa1395990:CDS |
| ATTGATGAAGGTTCAAAGGA+TGG | 0.546371 | tig0021982:-19984 | Msa1395990:CDS |
| TCAACTTGTGGTATATGACT+TGG | 0.549610 | tig0021982:-19485 | Msa1395990:three_prime_UTR |
| TGATCTTTGTAGTCAACTTG+TGG | 0.554077 | tig0021982:-19497 | Msa1395990:three_prime_UTR |
| TGAACAGTTTGCAAATGGTG+GGG | 0.557194 | tig0021982:-24044 | Msa1395990:CDS |
| GGGAAAGTGTAATGAGATTG+AGG | 0.557969 | tig0021982:+24409 | None:intergenic |
| AAGTGTTTCCGATGCTGCCA+AGG | 0.559809 | tig0021982:+20103 | None:intergenic |
| GGTCATGGATGATGAATGTT+GGG | 0.560124 | tig0021982:-19616 | Msa1395990:three_prime_UTR |
| GACAAAACGGTCATGAAGAT+CGG | 0.562499 | tig0021982:+23949 | None:intergenic |
| TCATACAAGTTTGGATCCAA+AGG | 0.570266 | tig0021982:+19903 | None:intergenic |
| ACATGATAAATGGTCAGTCC+AGG | 0.573039 | tig0021982:+21478 | None:intergenic |
| CTTCTCTCCTGTCGTGAGAG+TGG | 0.573861 | tig0021982:-19692 | Msa1395990:three_prime_UTR |
| CTACATAAATCTCAAGGCGG+TGG | 0.580370 | tig0021982:-24073 | Msa1395990:CDS |
| GGTGGTGAACAGTTTGCAAA+TGG | 0.580373 | tig0021982:-24049 | Msa1395990:CDS |
| GTGTTTACCACTCTCACGAC+AGG | 0.581242 | tig0021982:+19685 | None:intergenic |
| CGAACATAATAAATGATGAC+AGG | 0.582531 | tig0021982:+19580 | None:intergenic |
| ATGCATTGTACATGTGGTCA+TGG | 0.589120 | tig0021982:-19631 | Msa1395990:three_prime_UTR |
| GACCCAGAAGGCTCTGATAG+GGG | 0.597299 | tig0021982:+20053 | None:intergenic |
| TGGTCATGGATGATGAATGT+TGG | 0.601294 | tig0021982:-19617 | Msa1395990:three_prime_UTR |
| AATGTTCAACCTGCTGGAGG+TGG | 0.620630 | tig0021982:-23998 | Msa1395990:CDS |
| GCTTGTCAATTAGCTAGTGA+CGG | 0.624838 | tig0021982:-19527 | Msa1395990:three_prime_UTR |
| AACTTGTATGAAGATGATGC+TGG | 0.625161 | tig0021982:-19891 | Msa1395990:CDS |
| ATGATGCTACATAAATCTCA+AGG | 0.630109 | tig0021982:-24079 | Msa1395990:CDS |
| ATGACAGGAGCAACACCGAA+AGG | 0.633323 | tig0021982:-21523 | Msa1395990:intron |
| TGACAAGCTTGATATTGACA+TGG | 0.637216 | tig0021982:+19542 | None:intergenic |
| TCTTCTGCAAGTATTTACCC+TGG | 0.641154 | tig0021982:+20156 | None:intergenic |
| ATTTCTGTTGACTGAGAGTG+CGG | 0.642747 | tig0021982:+19662 | None:intergenic |
| TTTCTGTTGACTGAGAGTGC+GGG | 0.644510 | tig0021982:+19663 | None:intergenic |
| GCAGAAACTAGGTAGTACCT+TGG | 0.646490 | tig0021982:-20120 | Msa1395990:CDS |
| CAAATGAGAATTGAAGCCCA+GGG | 0.650033 | tig0021982:-20173 | Msa1395990:CDS |
| TTCAACCTGCTGGAGGTGGT+GGG | 0.656162 | tig0021982:-23994 | Msa1395990:CDS |
| AGGGCATCACTAGACCCAGA+AGG | 0.683087 | tig0021982:+20041 | None:intergenic |
| ATTGACATGCATTGTACATG+TGG | 0.698076 | tig0021982:-19637 | Msa1395990:three_prime_UTR |
| ATACTTGCAGAAGATCATAG+AGG | 0.704943 | tig0021982:-20147 | Msa1395990:CDS |
| TTGGAAACAGAAAATGACGA+CGG | 0.712157 | tig0021982:-19855 | Msa1395990:CDS |
| TCATGCAAAGAAGTTTCCGG+AGG | 0.726416 | tig0021982:-24107 | Msa1395990:CDS |
| ATGCTACATAAATCTCAAGG+CGG | 0.774912 | tig0021982:-24076 | Msa1395990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGAATTTGTATTTTTTTT+CGG | + | tig0021982:19445-19464 | None:intergenic | 10.0% |
| !!! | AACTATTTACTATTTTTTAT+AGG | - | tig0021982:19522-19541 | Msa1395990:three_prime_UTR | 10.0% |
| !! | AAAAAAAAAAGAGTTTATAT+AGG | + | tig0021982:22106-22125 | None:intergenic | 10.0% |
| !!! | TGAATAATTTTAAGTTAAAA+AGG | + | tig0021982:22746-22765 | None:intergenic | 10.0% |
| !!! | AATATTTTACTAATTTTACA+TGG | - | tig0021982:22891-22910 | Msa1395990:intron | 10.0% |
| !! | AATATATAATTTACAAAAAC+AGG | + | tig0021982:24532-24551 | None:intergenic | 10.0% |
| !!! | TTGAATTTGTATTTTTTTTC+GGG | + | tig0021982:19444-19463 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTGTGATTG+AGG | + | tig0021982:19822-19841 | None:intergenic | 15.0% |
| !! | GTTAGTGTATATTTATATTA+TGG | - | tig0021982:20521-20540 | Msa1395990:intron | 15.0% |
| !!! | TCATTAGTTTAAAATGATAA+AGG | - | tig0021982:20911-20930 | Msa1395990:intron | 15.0% |
| !!! | ACCTTTTTTTAATATTTTAG+TGG | - | tig0021982:22615-22634 | Msa1395990:intron | 15.0% |
| !! | TCCACTAAAATATTAAAAAA+AGG | + | tig0021982:22619-22638 | None:intergenic | 15.0% |
| !!! | TTTTTTAATATTTTAGTGGA+TGG | - | tig0021982:22619-22638 | Msa1395990:intron | 15.0% |
| !!! | TTGTTTTATTAAAATGTTAG+AGG | + | tig0021982:23229-23248 | None:intergenic | 15.0% |
| !! | AAGAATTATATAAAAATTGC+AGG | + | tig0021982:23830-23849 | None:intergenic | 15.0% |
| !! | TCTACATTAATATATACAAA+TGG | + | tig0021982:24564-24583 | None:intergenic | 15.0% |
| !!! | TGAATTTGTATTTTTTTTCG+GGG | + | tig0021982:19443-19462 | None:intergenic | 20.0% |
| !! | AGTGTATATTTATATTATGG+TGG | - | tig0021982:20524-20543 | Msa1395990:intron | 20.0% |
| !! | GTGTATATTTATATTATGGT+GGG | - | tig0021982:20525-20544 | Msa1395990:intron | 20.0% |
| !! | ATGAAAAATGAAATGCTTTA+CGG | - | tig0021982:20844-20863 | Msa1395990:intron | 20.0% |
| !! | ACATTAACTCTCATATTTAA+TGG | + | tig0021982:21098-21117 | None:intergenic | 20.0% |
| !! | TTAAATATGAGAGTTAATGT+TGG | - | tig0021982:21098-21117 | Msa1395990:intron | 20.0% |
| !! | ACTATTTACCTAATCATATA+AGG | + | tig0021982:21184-21203 | None:intergenic | 20.0% |
| !!! | CTTTTTTGTACTTGTAATAT+GGG | - | tig0021982:21205-21224 | Msa1395990:intron | 20.0% |
| !!! | TTTTTTGTACTTGTAATATG+GGG | - | tig0021982:21206-21225 | Msa1395990:intron | 20.0% |
| !!! | AGAATTTAAAACATTAGTAG+TGG | + | tig0021982:21269-21288 | None:intergenic | 20.0% |
| !! | AGTAGTTAAGGAATAAAAAA+TGG | + | tig0021982:22571-22590 | None:intergenic | 20.0% |
| !!! | ATTTTAAGTTAAAAAGGTCT+AGG | + | tig0021982:22740-22759 | None:intergenic | 20.0% |
| !! | AACTTAAAATTATTCATGAC+AGG | - | tig0021982:22750-22769 | Msa1395990:intron | 20.0% |
| !! | TACATGTAGTGATATATAAT+AGG | + | tig0021982:22930-22949 | None:intergenic | 20.0% |
| !! | CTATGCTATTAGTATAAATA+AGG | - | tig0021982:23345-23364 | Msa1395990:intron | 20.0% |
| !! | TTAATCATTGTTGAAGTTAT+GGG | + | tig0021982:23468-23487 | None:intergenic | 20.0% |
| !! | TTTAATCATTGTTGAAGTTA+TGG | + | tig0021982:23469-23488 | None:intergenic | 20.0% |
| !! | ATGATAAATAAAAGATGGTT+GGG | + | tig0021982:23505-23524 | None:intergenic | 20.0% |
| !!! | TAGAAACATTTGAAGTTTTA+CGG | + | tig0021982:23680-23699 | None:intergenic | 20.0% |
| !!! | TTTCAAGTTAAATTTCTTCA+CGG | - | tig0021982:23745-23764 | Msa1395990:intron | 20.0% |
| !!! | TGTAGTTTCATCTAAAATAA+TGG | + | tig0021982:23772-23791 | None:intergenic | 20.0% |
| !! | AAAAAAATTGTTAAGCACTT+CGG | + | tig0021982:23806-23825 | None:intergenic | 20.0% |
| !! | CTTATTTAATAGATAAGTGA+TGG | + | tig0021982:23913-23932 | None:intergenic | 20.0% |
| !!! | ATCAATTCTCTGTTTTTTAT+GGG | + | tig0021982:24290-24309 | None:intergenic | 20.0% |
| !!! | GTACTTTTTGGGTTTTTATT+TGG | + | tig0021982:19682-19701 | None:intergenic | 25.0% |
| !!! | AAATAGGGATTTGATTTTCT+CGG | + | tig0021982:19903-19922 | None:intergenic | 25.0% |
| ! | TTAAATTCATCCAAGTCAAA+TGG | + | tig0021982:20041-20060 | None:intergenic | 25.0% |
| !!! | AGATTAACATGTGTTGTTTT+TGG | - | tig0021982:20416-20435 | Msa1395990:intron | 25.0% |
| !!! | GTTTCTTTTTGATTGTGTTT+AGG | - | tig0021982:20448-20467 | Msa1395990:intron | 25.0% |
| ! | TCTACAATGATACTAAACAT+AGG | - | tig0021982:20640-20659 | Msa1395990:intron | 25.0% |
| ! | TGAAAAATGAAATGCTTTAC+GGG | - | tig0021982:20845-20864 | Msa1395990:intron | 25.0% |
| ! | GAATCATACCTTATATGATT+AGG | - | tig0021982:21173-21192 | Msa1395990:intron | 25.0% |
| !!! | GCTTTTTTGTACTTGTAATA+TGG | - | tig0021982:21204-21223 | Msa1395990:intron | 25.0% |
| !! | TGTGGTATTTTGTAATTACT+AGG | - | tig0021982:21366-21385 | Msa1395990:intron | 25.0% |
| ! | ACAGAATATGTACTTTCATT+TGG | + | tig0021982:21441-21460 | None:intergenic | 25.0% |
| !! | AAATGAAAGTACATATTCTG+TGG | - | tig0021982:21440-21459 | Msa1395990:intron | 25.0% |
| !! | AGTTGATTAATTCTGTTTTG+TGG | - | tig0021982:21831-21850 | Msa1395990:intron | 25.0% |
| !!! | TTTAGCTTTCAGTTTATGAA+AGG | - | tig0021982:22045-22064 | Msa1395990:intron | 25.0% |
| !! | TTAGCTTTCAGTTTATGAAA+GGG | - | tig0021982:22046-22065 | Msa1395990:intron | 25.0% |
| !!! | CTTTGTTTTAGTTGGTTTTT+AGG | - | tig0021982:22077-22096 | Msa1395990:intron | 25.0% |
| !!! | TGTGGTATTTTAATGAAATG+TGG | + | tig0021982:22179-22198 | None:intergenic | 25.0% |
| ! | GTTGCATTATTAATGAAATG+TGG | + | tig0021982:22197-22216 | None:intergenic | 25.0% |
| ! | GAATCAAAAAGAAAATCTAG+AGG | - | tig0021982:22291-22310 | Msa1395990:intron | 25.0% |
| !! | GTTTTTATCTCAAAAGATGA+GGG | + | tig0021982:22461-22480 | None:intergenic | 25.0% |
| !!! | TGTTTTTATCTCAAAAGATG+AGG | + | tig0021982:22462-22481 | None:intergenic | 25.0% |
| !! | TGATATTTGTACAACCATTT+TGG | + | tig0021982:22527-22546 | None:intergenic | 25.0% |
| ! | ACTTGATGTATAATCATTGA+TGG | - | tig0021982:22646-22665 | Msa1395990:intron | 25.0% |
| ! | ATGTATAATCATTGATGGAA+GGG | - | tig0021982:22651-22670 | Msa1395990:intron | 25.0% |
| !! | ATGGCTTTTAACATGATAAA+TGG | + | tig0021982:22823-22842 | None:intergenic | 25.0% |
| !! | GACATTTCTCATAACTTTTT+AGG | + | tig0021982:23033-23052 | None:intergenic | 25.0% |
| ! | AAGGAGTTACAAATTATCTT+CGG | + | tig0021982:23190-23209 | None:intergenic | 25.0% |
| ! | TATTAAAATGTTAGAGGTAG+AGG | + | tig0021982:23223-23242 | None:intergenic | 25.0% |
| ! | TTTATACTAATAGCATAGCT+AGG | + | tig0021982:23343-23362 | None:intergenic | 25.0% |
| ! | TGCTATTAGTATAAATAAGG+AGG | - | tig0021982:23348-23367 | Msa1395990:intron | 25.0% |
| ! | AAAGAGAAAAATGAAGACTT+TGG | + | tig0021982:23437-23456 | None:intergenic | 25.0% |
| ! | ACTTCAACAATGATTAAACT+TGG | - | tig0021982:23471-23490 | Msa1395990:intron | 25.0% |
| ! | GATGATAAATAAAAGATGGT+TGG | + | tig0021982:23506-23525 | None:intergenic | 25.0% |
| ! | CACAGATGATAAATAAAAGA+TGG | + | tig0021982:23510-23529 | None:intergenic | 25.0% |
| ! | TATAATTCTTCATTGTCAGA+AGG | + | tig0021982:23936-23955 | None:intergenic | 25.0% |
| !!! | TCAATTCTCTGTTTTTTATG+GGG | + | tig0021982:24289-24308 | None:intergenic | 25.0% |
| !!! | CATCAATTCTCTGTTTTTTA+TGG | + | tig0021982:24291-24310 | None:intergenic | 25.0% |
| ! | AAAAAACAGAGAATTGATGA+AGG | - | tig0021982:24292-24311 | Msa1395990:intron | 25.0% |
| !!! | ATATATACAAATGGATTGCA+TGG | + | tig0021982:24555-24574 | None:intergenic | 25.0% |
| ! | CTGTCATCATTTATTATGTT+CGG | - | tig0021982:24709-24728 | Msa1395990:intron | 25.0% |
| !!! | AGTGAAACTTGTTAATATCT+TGG | + | tig0021982:24842-24861 | None:intergenic | 25.0% |
| !! | AAAATGAGCGTTGAAATGAA+CGG | + | tig0021982:19776-19795 | None:intergenic | 30.0% |
| !! | AATAGGGATTTGATTTTCTC+GGG | + | tig0021982:19902-19921 | None:intergenic | 30.0% |
| AGAAAGAGAGAGAGAAAATA+GGG | + | tig0021982:19918-19937 | None:intergenic | 30.0% | |
| ! | AAATTGAAGCATTCAGAATC+TGG | + | tig0021982:19961-19980 | None:intergenic | 30.0% |
| AAGTCAAATGGAAAGTTTCT+AGG | + | tig0021982:20029-20048 | None:intergenic | 30.0% | |
| TAGAAACTTTCCATTTGACT+TGG | - | tig0021982:20028-20047 | Msa1395990:CDS | 30.0% | |
| !! | ATTGTTGTGTTTTTGTGTTG+TGG | - | tig0021982:20135-20154 | Msa1395990:CDS | 30.0% |
| ATGATGCTACATAAATCTCA+AGG | - | tig0021982:20209-20228 | Msa1395990:intron | 30.0% | |
| !!! | GTGTTTAGGTTTTAGAAGTT+AGG | - | tig0021982:20462-20481 | Msa1395990:intron | 30.0% |
| !!! | TTTAGGTTTTAGAAGTTAGG+AGG | - | tig0021982:20465-20484 | Msa1395990:intron | 30.0% |
| AAGCTACAAAGTTTAACTGT+TGG | - | tig0021982:20584-20603 | Msa1395990:intron | 30.0% | |
| TTGTAGATATGTCAGAATCA+CGG | + | tig0021982:20627-20646 | None:intergenic | 30.0% | |
| ATAGGCTAAACCTTCTAAAT+TGG | - | tig0021982:20658-20677 | Msa1395990:intron | 30.0% | |
| TAGGCTAAACCTTCTAAATT+GGG | - | tig0021982:20659-20678 | Msa1395990:intron | 30.0% | |
| ! | AAAAAGGGTTTAGACTTGTT+TGG | + | tig0021982:20798-20817 | None:intergenic | 30.0% |
| TTGCTAGAACATGCTAAAAA+GGG | + | tig0021982:20813-20832 | None:intergenic | 30.0% | |
| ATTGCTAGAACATGCTAAAA+AGG | + | tig0021982:20814-20833 | None:intergenic | 30.0% | |
| AAATAAGTAATGCATGCGTA+AGG | - | tig0021982:20887-20906 | Msa1395990:intron | 30.0% | |
| AATAAGTAATGCATGCGTAA+GGG | - | tig0021982:20888-20907 | Msa1395990:intron | 30.0% | |
| !! | ATTTTGTTACTTGCATTCCA+AGG | - | tig0021982:21007-21026 | Msa1395990:intron | 30.0% |
| ACCAATTGACAATACAATGT+TGG | - | tig0021982:21042-21061 | Msa1395990:intron | 30.0% | |
| TCCAACATTGTATTGTCAAT+TGG | + | tig0021982:21046-21065 | None:intergenic | 30.0% | |
| AATACAATGTTGGAGTGTAT+GGG | - | tig0021982:21052-21071 | Msa1395990:intron | 30.0% | |
| GCATCAACTCTCATATTTAA+TGG | + | tig0021982:21145-21164 | None:intergenic | 30.0% | |
| GGAATCAAAAAGAAATTGCA+AGG | + | tig0021982:21248-21267 | None:intergenic | 30.0% | |
| ATTCTAACAAGGACTAAAAC+TGG | + | tig0021982:21293-21312 | None:intergenic | 30.0% | |
| !! | GTGGCTTTATTAATGAAATG+TGG | - | tig0021982:21348-21367 | Msa1395990:intron | 30.0% |
| AATTTAGATATGGCGAACTA+GGG | + | tig0021982:21467-21486 | None:intergenic | 30.0% | |
| CTGCGAATACAATTTAGATA+TGG | + | tig0021982:21477-21496 | None:intergenic | 30.0% | |
| ! | TCTTTGCTCTTATTTAGAGA+TGG | - | tig0021982:21938-21957 | Msa1395990:intron | 30.0% |
| ATGTTATGGAAGAAACTTGT+AGG | - | tig0021982:21985-22004 | Msa1395990:intron | 30.0% | |
| GCAACATCAACATTTCTATA+AGG | - | tig0021982:22212-22231 | Msa1395990:intron | 30.0% | |
| TGGAAGAAGCTTAAATGTTA+GGG | - | tig0021982:22265-22284 | Msa1395990:intron | 30.0% | |
| CTTCAAAGTCGTTTCATATA+GGG | + | tig0021982:22333-22352 | None:intergenic | 30.0% | |
| ACTTCAAAGTCGTTTCATAT+AGG | + | tig0021982:22334-22353 | None:intergenic | 30.0% | |
| !!! | GTCATTACGAAGGTTTTAAA+TGG | + | tig0021982:22382-22401 | None:intergenic | 30.0% |
| ATTCCTTAACTACTATTCTC+TGG | - | tig0021982:22577-22596 | Msa1395990:intron | 30.0% | |
| TTCCTTAACTACTATTCTCT+GGG | - | tig0021982:22578-22597 | Msa1395990:intron | 30.0% | |
| TAAAAAAAGGTTCTGCTAAC+TGG | + | tig0021982:22606-22625 | None:intergenic | 30.0% | |
| GATGTATAATCATTGATGGA+AGG | - | tig0021982:22650-22669 | Msa1395990:intron | 30.0% | |
| TGTATAATCATTGATGGAAG+GGG | - | tig0021982:22652-22671 | Msa1395990:intron | 30.0% | |
| AGAAAAGGTAAGAAAAAGTG+TGG | + | tig0021982:22678-22697 | None:intergenic | 30.0% | |
| GGTAAAAGCAAAAACAGAAA+AGG | + | tig0021982:22693-22712 | None:intergenic | 30.0% | |
| TTAGCTAAACTATTGTCATC+TGG | + | tig0021982:22714-22733 | None:intergenic | 30.0% | |
| TCATGTTAAAAGCCATTTAC+AGG | - | tig0021982:22827-22846 | Msa1395990:intron | 30.0% | |
| CACATATTGATACCTGTAAA+TGG | + | tig0021982:22842-22861 | None:intergenic | 30.0% | |
| CATTTACAGGTATCAATATG+TGG | - | tig0021982:22840-22859 | Msa1395990:intron | 30.0% | |
| ! | CAGATTCTAAAGATGAGAAA+AGG | - | tig0021982:23106-23125 | Msa1395990:intron | 30.0% |
| AAAGATGAGAAAAGGAATTC+TGG | - | tig0021982:23114-23133 | Msa1395990:intron | 30.0% | |
| TAACTGATTAAGCATCCATA+TGG | - | tig0021982:23621-23640 | Msa1395990:intron | 30.0% | |
| AAGAGCGATCATTACATTAA+TGG | - | tig0021982:23710-23729 | Msa1395990:intron | 30.0% | |
| ! | AATTAGCTTCTAATTTGCCT+CGG | - | tig0021982:23955-23974 | Msa1395990:CDS | 30.0% |
| ATATCAAGGAAGTAAATGCA+CGG | + | tig0021982:24075-24094 | None:intergenic | 30.0% | |
| ATTTACTTCCTTGATATTCC+AGG | - | tig0021982:24078-24097 | Msa1395990:CDS | 30.0% | |
| !! | TTTGTAATTGCTTTTGAACC+TGG | + | tig0021982:24099-24118 | None:intergenic | 30.0% |
| AGCAATCTTTCTTGTAACTT+GGG | + | tig0021982:24341-24360 | None:intergenic | 30.0% | |
| CAGAAGAATGATTGTAATGT+TGG | - | tig0021982:24361-24380 | Msa1395990:five_prime_UTR | 30.0% | |
| CGAACATAATAAATGATGAC+AGG | + | tig0021982:24711-24730 | None:intergenic | 30.0% | |
| GTAATGAGATTGAGGATTAG+TGG | + | tig0021982:19874-19893 | None:intergenic | 35.0% | |
| GAGAAAGAGAGAGAGAAAAT+AGG | + | tig0021982:19919-19938 | None:intergenic | 35.0% | |
| !! | AATCTGGTTTCGAATTTTGC+GGG | + | tig0021982:19945-19964 | None:intergenic | 35.0% |
| !! | GAATCTGGTTTCGAATTTTG+CGG | + | tig0021982:19946-19965 | None:intergenic | 35.0% |
| ! | TTCAATTTTAAGCTTCTCGC+TGG | - | tig0021982:19973-19992 | Msa1395990:CDS | 35.0% |
| GTATCATGCAAAGAAGTTTC+CGG | - | tig0021982:20178-20197 | Msa1395990:CDS | 35.0% | |
| ATGCTACATAAATCTCAAGG+CGG | - | tig0021982:20212-20231 | Msa1395990:intron | 35.0% | |
| GAAAAGAAATACCCACTATC+TGG | + | tig0021982:20389-20408 | None:intergenic | 35.0% | |
| CAAAATCATGTGTGACATTG+TGG | + | tig0021982:20561-20580 | None:intergenic | 35.0% | |
| TAACTGTTGGAAAATCACAG+TGG | - | tig0021982:20597-20616 | Msa1395990:intron | 35.0% | |
| AACTGTTGGAAAATCACAGT+GGG | - | tig0021982:20598-20617 | Msa1395990:intron | 35.0% | |
| CAATACAATGTTGGAGTGTA+TGG | - | tig0021982:21051-21070 | Msa1395990:intron | 35.0% | |
| CAATTTAGATATGGCGAACT+AGG | + | tig0021982:21468-21487 | None:intergenic | 35.0% | |
| ! | GAATGTTACCATTTGGTCTT+GGG | - | tig0021982:21615-21634 | Msa1395990:intron | 35.0% |
| AAACGGTAAAGAAGCAGTTT+AGG | - | tig0021982:21667-21686 | Msa1395990:intron | 35.0% | |
| AACGGTAAAGAAGCAGTTTA+GGG | - | tig0021982:21668-21687 | Msa1395990:intron | 35.0% | |
| GTACCTATTCCAGAATTTCT+CGG | - | tig0021982:21756-21775 | Msa1395990:intron | 35.0% | |
| TACCTATTCCAGAATTTCTC+GGG | - | tig0021982:21757-21776 | Msa1395990:intron | 35.0% | |
| CAGGGTAACTAAGAATGTTA+TGG | - | tig0021982:21971-21990 | Msa1395990:intron | 35.0% | |
| TCAGTTTATGAAAGGGAGAA+AGG | - | tig0021982:22053-22072 | Msa1395990:intron | 35.0% | |
| CAGTTTATGAAAGGGAGAAA+GGG | - | tig0021982:22054-22073 | Msa1395990:intron | 35.0% | |
| !!! | AGAAAGGGCTTTGTTTTAGT+TGG | - | tig0021982:22069-22088 | Msa1395990:intron | 35.0% |
| TATAAGGTCCGATTTCAACA+AGG | - | tig0021982:22228-22247 | Msa1395990:intron | 35.0% | |
| GTGGAAGAAGCTTAAATGTT+AGG | - | tig0021982:22264-22283 | Msa1395990:intron | 35.0% | |
| AATCTTCAGAGTCATTACGA+AGG | + | tig0021982:22392-22411 | None:intergenic | 35.0% | |
| ! | TGATATCTGCACAACCATTT+TGG | - | tig0021982:22422-22441 | Msa1395990:intron | 35.0% |
| ! | GATATCTGCACAACCATTTT+GGG | - | tig0021982:22423-22442 | Msa1395990:intron | 35.0% |
| GAAAAAAGGTTGTCCCAAAA+TGG | + | tig0021982:22439-22458 | None:intergenic | 35.0% | |
| CTCAAAAGATGAGGGAAAAA+AGG | + | tig0021982:22453-22472 | None:intergenic | 35.0% | |
| GTTCCATAAGTTGTCCAAAA+TGG | - | tig0021982:22510-22529 | Msa1395990:intron | 35.0% | |
| ! | CAACCATTTTGGACAACTTA+TGG | + | tig0021982:22516-22535 | None:intergenic | 35.0% |
| ATCACTCTCAAAACACCTTT+CGG | + | tig0021982:22783-22802 | None:intergenic | 35.0% | |
| !!! | AAAGGTGTTTTGAGAGTGAT+GGG | - | tig0021982:22783-22802 | Msa1395990:intron | 35.0% |
| !!! | GTTGACTCAGAGTTCTTTTT+TGG | - | tig0021982:23078-23097 | Msa1395990:intron | 35.0% |
| AATCACTCAAATCAGCCATA+TGG | + | tig0021982:23639-23658 | None:intergenic | 35.0% | |
| ! | CTTTTGAACCTGGAATATCA+AGG | + | tig0021982:24089-24108 | None:intergenic | 35.0% |
| ATACTTGCAGAAGATCATAG+AGG | - | tig0021982:24141-24160 | Msa1395990:intron | 35.0% | |
| GAGAATTGATGAAGGTTCAA+AGG | - | tig0021982:24300-24319 | Msa1395990:intron | 35.0% | |
| ATTGATGAAGGTTCAAAGGA+TGG | - | tig0021982:24304-24323 | Msa1395990:intron | 35.0% | |
| GAGCAATCTTTCTTGTAACT+TGG | + | tig0021982:24342-24361 | None:intergenic | 35.0% | |
| TGATTGTAATGTTGGTCCTT+TGG | - | tig0021982:24369-24388 | Msa1395990:five_prime_UTR | 35.0% | |
| TCATACAAGTTTGGATCCAA+AGG | + | tig0021982:24388-24407 | None:intergenic | 35.0% | |
| GCATCATCTTCATACAAGTT+TGG | + | tig0021982:24397-24416 | None:intergenic | 35.0% | |
| AACTTGTATGAAGATGATGC+TGG | - | tig0021982:24397-24416 | Msa1395990:five_prime_UTR | 35.0% | |
| TTGGAAACAGAAAATGACGA+CGG | - | tig0021982:24433-24452 | Msa1395990:five_prime_UTR | 35.0% | |
| ATTGACATGCATTGTACATG+TGG | - | tig0021982:24651-24670 | Msa1395990:intron | 35.0% | |
| TGACAAGCTTGATATTGACA+TGG | + | tig0021982:24749-24768 | None:intergenic | 35.0% | |
| TGATCTTTGTAGTCAACTTG+TGG | - | tig0021982:24791-24810 | Msa1395990:intron | 35.0% | |
| TCAACTTGTGGTATATGACT+TGG | - | tig0021982:24803-24822 | Msa1395990:intron | 35.0% | |
| !! | ACGTGTCGTTCGTACTTTTT+GGG | + | tig0021982:19693-19712 | None:intergenic | 40.0% |
| !! | TTGGAAGGTGTCGTTAACAA+TGG | + | tig0021982:19738-19757 | None:intergenic | 40.0% |
| ! | GGGAAAGTGTAATGAGATTG+AGG | + | tig0021982:19882-19901 | None:intergenic | 40.0% |
| GTGAACAGTTTGCAAATGGT+GGG | - | tig0021982:20243-20262 | Msa1395990:intron | 40.0% | |
| TGAACAGTTTGCAAATGGTG+GGG | - | tig0021982:20244-20263 | Msa1395990:intron | 40.0% | |
| GTGAAAAATGTTCAACCTGC+TGG | - | tig0021982:20284-20303 | Msa1395990:intron | 40.0% | |
| AAAAATGTTCAACCTGCTGG+AGG | - | tig0021982:20287-20306 | Msa1395990:intron | 40.0% | |
| GACAAAACGGTCATGAAGAT+CGG | + | tig0021982:20342-20361 | None:intergenic | 40.0% | |
| !! | GCGTAATAGCATCGACAAAA+CGG | + | tig0021982:20355-20374 | None:intergenic | 40.0% |
| TTTAGAAGTTAGGAGGAGTG+TGG | - | tig0021982:20472-20491 | Msa1395990:intron | 40.0% | |
| CTAGGTTCTCCCAATTTAGA+AGG | + | tig0021982:20671-20690 | None:intergenic | 40.0% | |
| CTTGAAGTCTAAACCCTTTC+TGG | - | tig0021982:20742-20761 | Msa1395990:intron | 40.0% | |
| ! | AGGGTTTAGGATACCAGAAA+GGG | + | tig0021982:20758-20777 | None:intergenic | 40.0% |
| ! | AGGGTTTAGACTTGTTTGGA+AGG | + | tig0021982:20794-20813 | None:intergenic | 40.0% |
| CTGCAAGACTGTAACTACAT+GGG | - | tig0021982:20975-20994 | Msa1395990:intron | 40.0% | |
| TGGAAGGTCAGATTCTAACA+AGG | + | tig0021982:21304-21323 | None:intergenic | 40.0% | |
| ! | ACCTTCCAGAAATGCTGATT+TGG | - | tig0021982:21316-21335 | Msa1395990:intron | 40.0% |
| CCTAGATTGAATCTCGTGAT+GGG | - | tig0021982:21532-21551 | Msa1395990:intron | 40.0% | |
| GGAATGTTACCATTTGGTCT+TGG | - | tig0021982:21614-21633 | Msa1395990:intron | 40.0% | |
| ACTGCTTCTTTACCGTTTGA+GGG | + | tig0021982:21665-21684 | None:intergenic | 40.0% | |
| AACTGCTTCTTTACCGTTTG+AGG | + | tig0021982:21666-21685 | None:intergenic | 40.0% | |
| TTAGGGTACAAGAATTGACG+AGG | - | tig0021982:21685-21704 | Msa1395990:intron | 40.0% | |
| TAGGGTACAAGAATTGACGA+GGG | - | tig0021982:21686-21705 | Msa1395990:intron | 40.0% | |
| !! | CAACAGAAATTGGTCTTGTG+TGG | + | tig0021982:21716-21735 | None:intergenic | 40.0% |
| !! | AAGAAGAGTGCTAAGCTTGT+TGG | - | tig0021982:22011-22030 | Msa1395990:intron | 40.0% |
| !! | AGAAGAGTGCTAAGCTTGTT+GGG | - | tig0021982:22012-22031 | Msa1395990:intron | 40.0% |
| TCCGATTTCAACAAGGACAA+GGG | - | tig0021982:22235-22254 | Msa1395990:intron | 40.0% | |
| AGAAGCTTAAATGTTAGGGC+TGG | - | tig0021982:22269-22288 | Msa1395990:intron | 40.0% | |
| TGCCCAGAGAATAGTAGTTA+AGG | + | tig0021982:22583-22602 | None:intergenic | 40.0% | |
| !!! | GAAAGGTGTTTTGAGAGTGA+TGG | - | tig0021982:22782-22801 | Msa1395990:intron | 40.0% |
| ACATGATAAATGGTCAGTCC+AGG | + | tig0021982:22813-22832 | None:intergenic | 40.0% | |
| ACGAAGCGCAAGAAAAAACA+AGG | + | tig0021982:23006-23025 | None:intergenic | 40.0% | |
| ! | AATTCTGGAGACAGCATTTC+TGG | - | tig0021982:23129-23148 | Msa1395990:intron | 40.0% |
| AAAACAACTAAGACACCCAC+GGG | + | tig0021982:23167-23186 | None:intergenic | 40.0% | |
| GAAAACAACTAAGACACCCA+CGG | + | tig0021982:23168-23187 | None:intergenic | 40.0% | |
| !! | AGATAAGTGATGGATTACCC+AGG | + | tig0021982:23903-23922 | None:intergenic | 40.0% |
| CTTCTATGAGTGAGCATTTC+TGG | - | tig0021982:24038-24057 | Msa1395990:CDS | 40.0% | |
| !! | TGAGTGAGCATTTCTGGTAA+TGG | - | tig0021982:24044-24063 | Msa1395990:CDS | 40.0% |
| ACAAATGAGAATTGAAGCCC+AGG | - | tig0021982:24114-24133 | Msa1395990:CDS | 40.0% | |
| CAAATGAGAATTGAAGCCCA+GGG | - | tig0021982:24115-24134 | Msa1395990:CDS | 40.0% | |
| CTTCTGCAAGTATTTACCCT+GGG | + | tig0021982:24134-24153 | None:intergenic | 40.0% | |
| TCTTCTGCAAGTATTTACCC+TGG | + | tig0021982:24135-24154 | None:intergenic | 40.0% | |
| ATAGAGGAACAGCAGAAACT+AGG | - | tig0021982:24157-24176 | Msa1395990:intron | 40.0% | |
| ! | TTTTGCTTATCATGGGACAG+CGG | + | tig0021982:24211-24230 | None:intergenic | 40.0% |
| ! | TATGAAGATGATGCTGGCTA+TGG | - | tig0021982:24403-24422 | Msa1395990:five_prime_UTR | 40.0% |
| ! | TGCTGGCTATGGATTTGATT+TGG | - | tig0021982:24414-24433 | Msa1395990:five_prime_UTR | 40.0% |
| ! | ATTTCTGTTGACTGAGAGTG+CGG | + | tig0021982:24629-24648 | None:intergenic | 40.0% |
| ATGCATTGTACATGTGGTCA+TGG | - | tig0021982:24657-24676 | Msa1395990:intron | 40.0% | |
| TGGTCATGGATGATGAATGT+TGG | - | tig0021982:24671-24690 | Msa1395990:intron | 40.0% | |
| GGTCATGGATGATGAATGTT+GGG | - | tig0021982:24672-24691 | Msa1395990:intron | 40.0% | |
| GCTTGTCAATTAGCTAGTGA+CGG | - | tig0021982:24761-24780 | Msa1395990:intron | 40.0% | |
| TCTTTCGAGCCTTGAGAATG+AGG | - | tig0021982:19617-19636 | Msa1395990:three_prime_UTR | 45.0% | |
| CTTTCGAGCCTTGAGAATGA+GGG | - | tig0021982:19618-19637 | Msa1395990:three_prime_UTR | 45.0% | |
| TTACCTCTCCCTCATTCTCA+AGG | + | tig0021982:19629-19648 | None:intergenic | 45.0% | |
| GAGAATGAGGGAGAGGTAAA+CGG | - | tig0021982:19630-19649 | Msa1395990:three_prime_UTR | 45.0% | |
| !! | CACGTGTCGTTCGTACTTTT+TGG | + | tig0021982:19694-19713 | None:intergenic | 45.0% |
| ! | GTGTCGTTAACAATGGTGGA+GGG | + | tig0021982:19731-19750 | None:intergenic | 45.0% |
| !! | GAAGGTGTCGTTAACAATGG+TGG | + | tig0021982:19735-19754 | None:intergenic | 45.0% |
| !! | TGAGCGTTGAAATGAACGGA+CGG | + | tig0021982:19772-19791 | None:intergenic | 45.0% |
| TCATGCAAAGAAGTTTCCGG+AGG | - | tig0021982:20181-20200 | Msa1395990:CDS | 45.0% | |
| CTACATAAATCTCAAGGCGG+TGG | - | tig0021982:20215-20234 | Msa1395990:intron | 45.0% | |
| GGTGGTGAACAGTTTGCAAA+TGG | - | tig0021982:20239-20258 | Msa1395990:intron | 45.0% | |
| GGTGAACAGTTTGCAAATGG+TGG | - | tig0021982:20242-20261 | Msa1395990:intron | 45.0% | |
| GAACAGTTTGCAAATGGTGG+GGG | - | tig0021982:20245-20264 | Msa1395990:intron | 45.0% | |
| !!! | CCTGTGCTGTGCTTTTTTCT+AGG | + | tig0021982:20689-20708 | None:intergenic | 45.0% |
| ! | CCTAGAAAAAAGCACAGCAC+AGG | - | tig0021982:20686-20705 | Msa1395990:intron | 45.0% |
| ! | AGAAAAAAGCACAGCACAGG+AGG | - | tig0021982:20689-20708 | Msa1395990:intron | 45.0% |
| ! | GAGGGTTTAGGATACCAGAA+AGG | + | tig0021982:20759-20778 | None:intergenic | 45.0% |
| ! | TAGACTTGTTTGGAAGGCGA+GGG | + | tig0021982:20788-20807 | None:intergenic | 45.0% |
| ! | TTAGACTTGTTTGGAAGGCG+AGG | + | tig0021982:20789-20808 | None:intergenic | 45.0% |
| CCATGTAGTTACAGTCTTGC+AGG | + | tig0021982:20977-20996 | None:intergenic | 45.0% | |
| CCTGCAAGACTGTAACTACA+TGG | - | tig0021982:20974-20993 | Msa1395990:intron | 45.0% | |
| TTGGTGCACAACTCAAACCT+TGG | + | tig0021982:21027-21046 | None:intergenic | 45.0% | |
| ! | GCCAAATCAGCATTTCTGGA+AGG | + | tig0021982:21320-21339 | None:intergenic | 45.0% |
| GCATGCCAAATCAGCATTTC+TGG | + | tig0021982:21324-21343 | None:intergenic | 45.0% | |
| GCCTAGATTGAATCTCGTGA+TGG | - | tig0021982:21531-21550 | Msa1395990:intron | 45.0% | |
| CCCATCACGAGATTCAATCT+AGG | + | tig0021982:21535-21554 | None:intergenic | 45.0% | |
| !! | ATTGAATCTCGTGATGGGTC+AGG | - | tig0021982:21537-21556 | Msa1395990:intron | 45.0% |
| GAGGGAGGAATGTTACCATT+TGG | - | tig0021982:21608-21627 | Msa1395990:intron | 45.0% | |
| TTCTTTACCGTTTGAGGGAC+CGG | + | tig0021982:21660-21679 | None:intergenic | 45.0% | |
| AGGGTACAAGAATTGACGAG+GGG | - | tig0021982:21687-21706 | Msa1395990:intron | 45.0% | |
| AGTGAGGACGCAACAGAAAT+TGG | + | tig0021982:21726-21745 | None:intergenic | 45.0% | |
| AGGTACATAACTCGACAGTG+AGG | + | tig0021982:21742-21761 | None:intergenic | 45.0% | |
| !! | CTCCCGAGAAATTCTGGAAT+AGG | + | tig0021982:21762-21781 | None:intergenic | 45.0% |
| CTATTCCAGAATTTCTCGGG+AGG | - | tig0021982:21760-21779 | Msa1395990:intron | 45.0% | |
| GATTGCGTGATACACGAAGA+AGG | - | tig0021982:21879-21898 | Msa1395990:intron | 45.0% | |
| !!! | GAAGGTTTTGTTTGCTCGCA+TGG | - | tig0021982:21897-21916 | Msa1395990:intron | 45.0% |
| CAAAGAAGCCCATCATCATC+GGG | + | tig0021982:21924-21943 | None:intergenic | 45.0% | |
| GCAAAGAAGCCCATCATCAT+CGG | + | tig0021982:21925-21944 | None:intergenic | 45.0% | |
| TAGAGATGGTCATTGAGTGC+AGG | - | tig0021982:21952-21971 | Msa1395990:intron | 45.0% | |
| AGAGATGGTCATTGAGTGCA+GGG | - | tig0021982:21953-21972 | Msa1395990:intron | 45.0% | |
| GTCCGATTTCAACAAGGACA+AGG | - | tig0021982:22234-22253 | Msa1395990:intron | 45.0% | |
| GCCCTTGTCCTTGTTGAAAT+CGG | + | tig0021982:22239-22258 | None:intergenic | 45.0% | |
| ACAAGGACAAGGGCTAAAAG+TGG | - | tig0021982:22245-22264 | Msa1395990:intron | 45.0% | |
| !! | CTACATGTAGAAGTATCGCC+TGG | - | tig0021982:22941-22960 | Msa1395990:intron | 45.0% |
| AAGTACTTGCCTGAATCACC+AGG | - | tig0021982:22966-22985 | Msa1395990:intron | 45.0% | |
| TTACCATCACCTGGTGATTC+AGG | + | tig0021982:22978-22997 | None:intergenic | 45.0% | |
| ! | GAATCACCAGGTGATGGTAA+AGG | - | tig0021982:22978-22997 | Msa1395990:intron | 45.0% |
| AAACAACTAAGACACCCACG+GGG | + | tig0021982:23166-23185 | None:intergenic | 45.0% | |
| ATAAAACAATCGTGCCCTGC+AGG | - | tig0021982:23240-23259 | Msa1395990:intron | 45.0% | |
| TAAAACAATCGTGCCCTGCA+GGG | - | tig0021982:23241-23260 | Msa1395990:intron | 45.0% | |
| !! | TTGATTTGCAATCCCCTGCA+GGG | + | tig0021982:23257-23276 | None:intergenic | 45.0% |
| !! | ATTGATTTGCAATCCCCTGC+AGG | + | tig0021982:23258-23277 | None:intergenic | 45.0% |
| AGTCATGCATCTTGTGTCCT+GGG | - | tig0021982:23883-23902 | Msa1395990:intron | 45.0% | |
| ! | TTCTAATTTGCCTCGGACTC+AGG | - | tig0021982:23962-23981 | Msa1395990:CDS | 45.0% |
| ACACTTAAATCCTGAGTCCG+AGG | + | tig0021982:23975-23994 | None:intergenic | 45.0% | |
| GCAGAAACTAGGTAGTACCT+TGG | - | tig0021982:24168-24187 | Msa1395990:intron | 45.0% | |
| !!! | GGGCTGGTTTTGCTTATCAT+GGG | + | tig0021982:24218-24237 | None:intergenic | 45.0% |
| ! | TTTCTGTTGACTGAGAGTGC+GGG | + | tig0021982:24628-24647 | None:intergenic | 45.0% |
| !! | GGTGTCGTTAACAATGGTGG+AGG | + | tig0021982:19732-19751 | None:intergenic | 50.0% |
| !!! | ACGGCGGCGTTTTAATTGGA+AGG | + | tig0021982:19753-19772 | None:intergenic | 50.0% |
| TGTAGCATCATCGTCTCCTC+CGG | + | tig0021982:20200-20219 | None:intergenic | 50.0% | |
| CATAAATCTCAAGGCGGTGG+TGG | - | tig0021982:20218-20237 | Msa1395990:intron | 50.0% | |
| ! | GCAAATGGTGGGGGTTTGAA+TGG | - | tig0021982:20254-20273 | Msa1395990:intron | 50.0% |
| AATGTTCAACCTGCTGGAGG+TGG | - | tig0021982:20290-20309 | Msa1395990:intron | 50.0% | |
| GTCGATGCTATTACGCAGCT+TGG | - | tig0021982:20359-20378 | Msa1395990:intron | 50.0% | |
| GATGCTATTACGCAGCTTGG+TGG | - | tig0021982:20362-20381 | Msa1395990:intron | 50.0% | |
| ! | AGCTTGGTGGACCAGATAGT+GGG | - | tig0021982:20375-20394 | Msa1395990:intron | 50.0% |
| ! | AGAAGTTAGGAGGAGTGTGG+AGG | - | tig0021982:20475-20494 | Msa1395990:intron | 50.0% |
| ! | GAAGTTAGGAGGAGTGTGGA+GGG | - | tig0021982:20476-20495 | Msa1395990:intron | 50.0% |
| ! | TGTGGAGGGAAAGGGCTTTT+TGG | - | tig0021982:20490-20509 | Msa1395990:intron | 50.0% |
| ! | GAGGGAAAGGGCTTTTTGGA+TGG | - | tig0021982:20494-20513 | Msa1395990:intron | 50.0% |
| ! | AAAAAGCACAGCACAGGAGG+AGG | - | tig0021982:20692-20711 | Msa1395990:intron | 50.0% |
| AGGAGGAGGATGACTTTGGA+GGG | - | tig0021982:20706-20725 | Msa1395990:intron | 50.0% | |
| ! | AGACTTGTTTGGAAGGCGAG+GGG | + | tig0021982:20787-20806 | None:intergenic | 50.0% |
| !! | GCTGATTTGGCATGCTGATG+TGG | - | tig0021982:21329-21348 | Msa1395990:intron | 50.0% |
| GGGTACAAGAATTGACGAGG+GGG | - | tig0021982:21688-21707 | Msa1395990:intron | 50.0% | |
| GTTCTCCTCCCGAGAAATTC+TGG | + | tig0021982:21768-21787 | None:intergenic | 50.0% | |
| ATGACAGGAGCAACACCGAA+AGG | - | tig0021982:22765-22784 | Msa1395990:intron | 50.0% | |
| ATTCAGGCAAGTACTTCGCC+AGG | + | tig0021982:22962-22981 | None:intergenic | 50.0% | |
| TTGCCTGAATCACCAGGTGA+TGG | - | tig0021982:22972-22991 | Msa1395990:intron | 50.0% | |
| ! | AAGGCACCTTTACCATCACC+TGG | + | tig0021982:22987-23006 | None:intergenic | 50.0% |
| !! | AGGTAGAGGCGTCAAAGTGA+AGG | + | tig0021982:23209-23228 | None:intergenic | 50.0% |
| AAAACAATCGTGCCCTGCAG+GGG | - | tig0021982:23242-23261 | Msa1395990:intron | 50.0% | |
| TGACGCACTACGAATGCAGA+TGG | - | tig0021982:23277-23296 | Msa1395990:intron | 50.0% | |
| ACGTCTGCATGAACAGCTTG+AGG | - | tig0021982:23310-23329 | Msa1395990:intron | 50.0% | |
| GAGTCATGCATCTTGTGTCC+TGG | - | tig0021982:23882-23901 | Msa1395990:intron | 50.0% | |
| AGGTAGTACCTTGGCAGCAT+CGG | - | tig0021982:24177-24196 | Msa1395990:intron | 50.0% | |
| AAGTGTTTCCGATGCTGCCA+AGG | + | tig0021982:24188-24207 | None:intergenic | 50.0% | |
| !!! | GGGGCTGGTTTTGCTTATCA+TGG | + | tig0021982:24219-24238 | None:intergenic | 50.0% |
| ! | AGACCCAGAAGGCTCTGATA+GGG | + | tig0021982:24239-24258 | None:intergenic | 50.0% |
| ! | TAGACCCAGAAGGCTCTGAT+AGG | + | tig0021982:24240-24259 | None:intergenic | 50.0% |
| !! | GGGAGAAAAAGTGCCTGCAA+GGG | + | tig0021982:24269-24288 | None:intergenic | 50.0% |
| GTGTTTACCACTCTCACGAC+AGG | + | tig0021982:24606-24625 | None:intergenic | 50.0% | |
| GAGCCTTGAGAATGAGGGAG+AGG | - | tig0021982:19623-19642 | Msa1395990:three_prime_UTR | 55.0% | |
| AACGACACGTGACAAACGCG+TGG | - | tig0021982:19703-19722 | Msa1395990:three_prime_UTR | 55.0% | |
| ACGACACGTGACAAACGCGT+GGG | - | tig0021982:19704-19723 | Msa1395990:three_prime_UTR | 55.0% | |
| !! | ACGGACGGCGGCGTTTTAAT+TGG | + | tig0021982:19757-19776 | None:intergenic | 55.0% |
| GCGTTGAAATGAACGGACGG+CGG | + | tig0021982:19769-19788 | None:intergenic | 55.0% | |
| ! | AAATCTCAAGGCGGTGGTGG+TGG | - | tig0021982:20221-20240 | Msa1395990:intron | 55.0% |
| TTCAACCTGCTGGAGGTGGT+GGG | - | tig0021982:20294-20313 | Msa1395990:intron | 55.0% | |
| ! | CAGCTTGGTGGACCAGATAG+TGG | - | tig0021982:20374-20393 | Msa1395990:intron | 55.0% |
| ! | TAGGAGGAGTGTGGAGGGAA+AGG | - | tig0021982:20481-20500 | Msa1395990:intron | 55.0% |
| ! | AGGAGGAGTGTGGAGGGAAA+GGG | - | tig0021982:20482-20501 | Msa1395990:intron | 55.0% |
| GCACAGGAGGAGGATGACTT+TGG | - | tig0021982:20702-20721 | Msa1395990:intron | 55.0% | |
| CAGGAGGAGGATGACTTTGG+AGG | - | tig0021982:20705-20724 | Msa1395990:intron | 55.0% | |
| ! | GACTTGTTTGGAAGGCGAGG+GGG | + | tig0021982:20786-20805 | None:intergenic | 55.0% |
| AGTCCCGATACGTGACGAAG+AGG | - | tig0021982:21589-21608 | Msa1395990:intron | 55.0% | |
| GTCCCGATACGTGACGAAGA+GGG | - | tig0021982:21590-21609 | Msa1395990:intron | 55.0% | |
| CTCCCTCTTCGTCACGTATC+GGG | + | tig0021982:21595-21614 | None:intergenic | 55.0% | |
| CCTCCCTCTTCGTCACGTAT+CGG | + | tig0021982:21596-21615 | None:intergenic | 55.0% | |
| CGGTGGATCCCAAGACCAAA+TGG | + | tig0021982:21626-21645 | None:intergenic | 55.0% | |
| ! | TGGTCTTGGGATCCACCGAT+CGG | - | tig0021982:21628-21647 | Msa1395990:intron | 55.0% |
| AGGAGAACAGTTGCCGTCAG+TGG | - | tig0021982:21780-21799 | Msa1395990:intron | 55.0% | |
| CCGCTACGAATCACCACTGA+CGG | + | tig0021982:21796-21815 | None:intergenic | 55.0% | |
| CCGTCAGTGGTGATTCGTAG+CGG | - | tig0021982:21793-21812 | Msa1395990:intron | 55.0% | |
| TCGCATGGTCCCGATGATGA+TGG | - | tig0021982:21912-21931 | Msa1395990:intron | 55.0% | |
| CGCATGGTCCCGATGATGAT+GGG | - | tig0021982:21913-21932 | Msa1395990:intron | 55.0% | |
| !! | TTGAGAGTGATGGGTGTGCC+TGG | - | tig0021982:22792-22811 | Msa1395990:intron | 55.0% |
| CGCACTACGAATGCAGATGG+AGG | - | tig0021982:23280-23299 | Msa1395990:intron | 55.0% | |
| AGCCCCTATCAGAGCCTTCT+GGG | - | tig0021982:24233-24252 | Msa1395990:intron | 55.0% | |
| ! | GACCCAGAAGGCTCTGATAG+GGG | + | tig0021982:24238-24257 | None:intergenic | 55.0% |
| ! | AGGGCATCACTAGACCCAGA+AGG | + | tig0021982:24250-24269 | None:intergenic | 55.0% |
| !! | GGGGAGAAAAAGTGCCTGCA+AGG | + | tig0021982:24270-24289 | None:intergenic | 55.0% |
| CTTCTCTCCTGTCGTGAGAG+TGG | - | tig0021982:24596-24615 | Msa1395990:intron | 55.0% | |
| GTTCAACCTGCTGGAGGTGG+TGG | - | tig0021982:20293-20312 | Msa1395990:intron | 60.0% | |
| GTGGGAAGCAGCGTTTGCGT+TGG | - | tig0021982:20312-20331 | Msa1395990:intron | 60.0% | |
| GTTTGGAAGGCGAGGGGGAA+GGG | + | tig0021982:20781-20800 | None:intergenic | 60.0% | |
| TGTTTGGAAGGCGAGGGGGA+AGG | + | tig0021982:20782-20801 | None:intergenic | 60.0% | |
| CCGATACGTGACGAAGAGGG+AGG | - | tig0021982:21593-21612 | Msa1395990:intron | 60.0% | |
| TTGGGATCCACCGATCGGCT+TGG | - | tig0021982:21633-21652 | Msa1395990:intron | 60.0% | |
| !! | ATCCACCGATCGGCTTGGTC+CGG | - | tig0021982:21638-21657 | Msa1395990:intron | 60.0% |
| GCTTGGTCCGGTCCCTCAAA+CGG | - | tig0021982:21650-21669 | Msa1395990:intron | 60.0% | |
| !! | TGGCGCTGATTCTTCCCCGT+GGG | - | tig0021982:23149-23168 | Msa1395990:intron | 60.0% |
| ! | CAGAAGGCTCTGATAGGGGC+TGG | + | tig0021982:24234-24253 | None:intergenic | 60.0% |
| CAGCCCCTATCAGAGCCTTC+TGG | - | tig0021982:24232-24251 | Msa1395990:intron | 60.0% | |
| GGGTCTAGTGATGCCCTTGC+AGG | - | tig0021982:24253-24272 | Msa1395990:intron | 60.0% | |
| TGCTTCCCACCACCTCCAGC+AGG | + | tig0021982:20302-20321 | None:intergenic | 65.0% | |
| CGAGGGGGAAGGGAGGGTTT+AGG | + | tig0021982:20771-20790 | None:intergenic | 65.0% | |
| AGGGACCGGACCAAGCCGAT+CGG | + | tig0021982:21646-21665 | None:intergenic | 65.0% | |
| !! | CTGGCGCTGATTCTTCCCCG+TGG | - | tig0021982:23148-23167 | Msa1395990:intron | 65.0% |
| GGAAGGCGAGGGGGAAGGGA+GGG | + | tig0021982:20777-20796 | None:intergenic | 70.0% | |
| TGGAAGGCGAGGGGGAAGGG+AGG | + | tig0021982:20778-20797 | None:intergenic | 70.0% | |
| GACCGGACCAAGCCGATCGG+TGG | + | tig0021982:21643-21662 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021982 | gene | 19434 | 24876 | 19434 | ID=Msa1395990;Name=Msa1395990 |
| tig0021982 | mRNA | 19434 | 24876 | 19434 | ID=Msa1395990-mRNA-1;Parent=Msa1395990;Name=Msa1395990-mRNA-1;_AED=0.17;_eAED=0.17;_QI=238|0.75|1|1|0|0.4|5|402|222 |
| tig0021982 | exon | 19434 | 20210 | 19434 | ID=Msa1395990-mRNA-1:exon:15258;Parent=Msa1395990-mRNA-1 |
| tig0021982 | exon | 21462 | 21538 | 21462 | ID=Msa1395990-mRNA-1:exon:15257;Parent=Msa1395990-mRNA-1 |
| tig0021982 | exon | 23918 | 24141 | 23918 | ID=Msa1395990-mRNA-1:exon:15256;Parent=Msa1395990-mRNA-1 |
| tig0021982 | exon | 24316 | 24481 | 24316 | ID=Msa1395990-mRNA-1:exon:15255;Parent=Msa1395990-mRNA-1 |
| tig0021982 | exon | 24812 | 24876 | 24812 | ID=Msa1395990-mRNA-1:exon:15254;Parent=Msa1395990-mRNA-1 |
| tig0021982 | five_prime_UTR | 24812 | 24876 | 24812 | ID=Msa1395990-mRNA-1:five_prime_utr;Parent=Msa1395990-mRNA-1 |
| tig0021982 | five_prime_UTR | 24316 | 24481 | 24316 | ID=Msa1395990-mRNA-1:five_prime_utr;Parent=Msa1395990-mRNA-1 |
| tig0021982 | five_prime_UTR | 24135 | 24141 | 24135 | ID=Msa1395990-mRNA-1:five_prime_utr;Parent=Msa1395990-mRNA-1 |
| tig0021982 | CDS | 23918 | 24134 | 23918 | ID=Msa1395990-mRNA-1:cds;Parent=Msa1395990-mRNA-1 |
| tig0021982 | CDS | 21462 | 21538 | 21462 | ID=Msa1395990-mRNA-1:cds;Parent=Msa1395990-mRNA-1 |
| tig0021982 | CDS | 19836 | 20210 | 19836 | ID=Msa1395990-mRNA-1:cds;Parent=Msa1395990-mRNA-1 |
| tig0021982 | three_prime_UTR | 19434 | 19835 | 19434 | ID=Msa1395990-mRNA-1:three_prime_utr;Parent=Msa1395990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
