Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1400130 | XP_003598354.1 | 96.894 | 322 | 10 | 0 | 1 | 322 | 1 | 322 | 0.0 | 647 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1400130 | sp|Q9LES3|AI5L2_ARATH | 52.396 | 313 | 120 | 8 | 14 | 322 | 10 | 297 | 1.96e-87 | 267 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1400130 | G7IVG7 | 96.894 | 322 | 10 | 0 | 1 | 322 | 1 | 322 | 0.0 | 647 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1400130 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1400130 | MtrunA17_Chr3g0080341 | 96.894 | 322 | 10 | 0 | 1 | 322 | 1 | 322 | 0.0 | 647 |
| Msa1400130 | MtrunA17_Chr8g0355121 | 65.260 | 308 | 92 | 4 | 16 | 322 | 20 | 313 | 5.17e-138 | 393 |
| Msa1400130 | MtrunA17_Chr7g0254991 | 49.530 | 319 | 127 | 9 | 20 | 320 | 16 | 318 | 7.70e-84 | 256 |
| Msa1400130 | MtrunA17_Chr6g0460301 | 50.621 | 322 | 126 | 9 | 19 | 322 | 15 | 321 | 2.85e-80 | 246 |
| Msa1400130 | MtrunA17_Chr4g0044771 | 36.176 | 340 | 154 | 13 | 20 | 301 | 18 | 352 | 1.80e-42 | 150 |
| Msa1400130 | MtrunA17_Chr5g0440841 | 46.067 | 178 | 76 | 6 | 1 | 170 | 1 | 166 | 1.14e-34 | 127 |
| Msa1400130 | MtrunA17_Chr5g0440841 | 57.955 | 88 | 37 | 0 | 235 | 322 | 182 | 269 | 5.32e-23 | 96.3 |
| Msa1400130 | MtrunA17_Chr2g0321411 | 33.968 | 315 | 139 | 10 | 23 | 320 | 11 | 273 | 1.05e-33 | 125 |
| Msa1400130 | MtrunA17_Chr2g0321381 | 36.271 | 295 | 152 | 10 | 12 | 294 | 14 | 284 | 4.34e-28 | 110 |
| Msa1400130 | MtrunA17_Chr3g0133971 | 48.361 | 122 | 56 | 2 | 19 | 138 | 26 | 142 | 7.28e-27 | 109 |
| Msa1400130 | MtrunA17_Chr3g0133971 | 42.202 | 109 | 60 | 1 | 189 | 297 | 293 | 398 | 1.26e-17 | 83.2 |
| Msa1400130 | MtrunA17_Chr7g0266211 | 43.182 | 132 | 56 | 3 | 26 | 138 | 45 | 176 | 1.81e-20 | 91.3 |
| Msa1400130 | MtrunA17_Chr5g0424871 | 29.054 | 296 | 167 | 8 | 16 | 273 | 8 | 298 | 9.12e-20 | 87.8 |
| Msa1400130 | MtrunA17_Chr4g0051101 | 42.718 | 103 | 53 | 2 | 196 | 296 | 77 | 175 | 7.88e-14 | 69.3 |
| Msa1400130 | MtrunA17_Chr1g0201751 | 62.745 | 51 | 19 | 0 | 246 | 296 | 157 | 207 | 3.51e-12 | 65.5 |
| Msa1400130 | MtrunA17_Chr5g0405951 | 57.627 | 59 | 13 | 1 | 251 | 297 | 166 | 224 | 9.23e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1400130 | AT3G56850.1 | 52.396 | 313 | 120 | 8 | 14 | 322 | 10 | 297 | 2.00e-88 | 267 |
| Msa1400130 | AT2G41070.3 | 48.418 | 316 | 101 | 10 | 10 | 322 | 6 | 262 | 4.55e-75 | 231 |
| Msa1400130 | AT2G41070.1 | 48.418 | 316 | 101 | 10 | 10 | 322 | 6 | 262 | 4.55e-75 | 231 |
| Msa1400130 | AT2G41070.2 | 48.418 | 316 | 101 | 10 | 10 | 322 | 6 | 262 | 4.55e-75 | 231 |
| Msa1400130 | AT2G41070.4 | 48.418 | 316 | 101 | 10 | 10 | 322 | 15 | 271 | 4.71e-75 | 232 |
| Msa1400130 | AT2G41070.5 | 47.931 | 290 | 89 | 10 | 10 | 296 | 6 | 236 | 3.45e-64 | 203 |
| Msa1400130 | AT1G49720.2 | 34.320 | 338 | 162 | 7 | 18 | 296 | 21 | 357 | 3.77e-45 | 159 |
| Msa1400130 | AT1G49720.1 | 34.320 | 338 | 162 | 7 | 18 | 296 | 21 | 357 | 4.02e-45 | 158 |
| Msa1400130 | AT1G49720.3 | 34.320 | 338 | 162 | 7 | 18 | 296 | 21 | 357 | 4.02e-45 | 158 |
| Msa1400130 | AT2G36270.1 | 32.346 | 405 | 169 | 13 | 12 | 315 | 30 | 430 | 4.41e-37 | 138 |
| Msa1400130 | AT2G36270.2 | 32.346 | 405 | 169 | 13 | 12 | 315 | 30 | 430 | 4.41e-37 | 138 |
| Msa1400130 | AT2G36270.3 | 32.976 | 373 | 155 | 12 | 12 | 293 | 30 | 398 | 2.53e-35 | 133 |
| Msa1400130 | AT3G44460.1 | 37.705 | 305 | 131 | 13 | 14 | 294 | 22 | 291 | 1.82e-29 | 115 |
| Msa1400130 | AT3G19290.2 | 43.046 | 151 | 65 | 3 | 9 | 138 | 21 | 171 | 3.01e-25 | 105 |
| Msa1400130 | AT3G19290.4 | 43.046 | 151 | 65 | 3 | 9 | 138 | 21 | 171 | 3.26e-25 | 105 |
| Msa1400130 | AT3G19290.4 | 37.857 | 140 | 64 | 4 | 178 | 296 | 260 | 397 | 6.27e-14 | 72.4 |
| Msa1400130 | AT3G19290.1 | 43.046 | 151 | 65 | 3 | 9 | 138 | 21 | 171 | 4.19e-25 | 105 |
| Msa1400130 | AT3G19290.1 | 37.857 | 140 | 64 | 4 | 178 | 296 | 260 | 397 | 7.75e-14 | 72.4 |
| Msa1400130 | AT3G19290.5 | 43.046 | 151 | 65 | 3 | 9 | 138 | 21 | 171 | 4.19e-25 | 105 |
| Msa1400130 | AT3G19290.5 | 37.857 | 140 | 64 | 4 | 178 | 296 | 260 | 397 | 7.75e-14 | 72.4 |
| Msa1400130 | AT3G19290.3 | 43.046 | 151 | 65 | 3 | 9 | 138 | 21 | 171 | 4.31e-25 | 105 |
| Msa1400130 | AT3G19290.3 | 37.857 | 140 | 64 | 4 | 178 | 296 | 260 | 397 | 7.35e-14 | 72.4 |
| Msa1400130 | AT5G42910.1 | 28.533 | 368 | 175 | 13 | 20 | 319 | 20 | 367 | 2.10e-23 | 99.4 |
| Msa1400130 | AT4G34000.3 | 34.715 | 193 | 77 | 6 | 19 | 171 | 26 | 209 | 8.30e-22 | 95.9 |
| Msa1400130 | AT4G34000.3 | 60.000 | 60 | 24 | 0 | 237 | 296 | 359 | 418 | 1.82e-15 | 77.0 |
| Msa1400130 | AT4G34000.1 | 34.197 | 193 | 78 | 5 | 19 | 171 | 26 | 209 | 1.08e-21 | 95.5 |
| Msa1400130 | AT4G34000.1 | 60.000 | 65 | 25 | 1 | 237 | 301 | 359 | 422 | 2.39e-15 | 77.0 |
| Msa1400130 | AT4G34000.4 | 34.197 | 193 | 78 | 5 | 19 | 171 | 26 | 209 | 1.08e-21 | 95.5 |
| Msa1400130 | AT4G34000.4 | 60.000 | 65 | 25 | 1 | 237 | 301 | 359 | 422 | 2.39e-15 | 77.0 |
| Msa1400130 | AT4G34000.2 | 34.197 | 193 | 78 | 5 | 19 | 171 | 26 | 209 | 1.08e-21 | 95.5 |
| Msa1400130 | AT4G34000.2 | 60.000 | 65 | 25 | 1 | 237 | 301 | 359 | 422 | 2.39e-15 | 77.0 |
| Msa1400130 | AT1G45249.10 | 41.791 | 134 | 60 | 3 | 20 | 138 | 21 | 151 | 2.26e-21 | 94.0 |
| Msa1400130 | AT1G45249.5 | 41.791 | 134 | 60 | 3 | 20 | 138 | 21 | 151 | 2.26e-21 | 94.0 |
| Msa1400130 | AT1G45249.4 | 41.791 | 134 | 60 | 3 | 20 | 138 | 21 | 151 | 3.93e-21 | 93.6 |
| Msa1400130 | AT1G45249.8 | 41.791 | 134 | 60 | 3 | 20 | 138 | 21 | 151 | 3.93e-21 | 93.6 |
| Msa1400130 | AT1G45249.2 | 41.791 | 134 | 60 | 3 | 20 | 138 | 21 | 151 | 3.93e-21 | 93.6 |
| Msa1400130 | AT1G45249.9 | 41.791 | 134 | 60 | 3 | 20 | 138 | 21 | 151 | 3.93e-21 | 93.6 |
| Msa1400130 | AT1G45249.1 | 41.791 | 134 | 60 | 3 | 20 | 138 | 21 | 151 | 4.09e-21 | 93.6 |
| Msa1400130 | AT1G45249.1 | 39.860 | 143 | 61 | 5 | 195 | 320 | 280 | 414 | 9.88e-18 | 83.6 |
| Msa1400130 | AT1G45249.7 | 41.791 | 134 | 60 | 3 | 20 | 138 | 36 | 166 | 4.28e-21 | 93.6 |
| Msa1400130 | AT1G45249.7 | 39.860 | 143 | 61 | 5 | 195 | 320 | 295 | 429 | 1.38e-17 | 83.6 |
| Msa1400130 | AT1G45249.6 | 41.791 | 134 | 60 | 3 | 20 | 138 | 36 | 166 | 4.28e-21 | 93.6 |
| Msa1400130 | AT1G45249.6 | 39.860 | 143 | 61 | 5 | 195 | 320 | 295 | 429 | 1.38e-17 | 83.6 |
| Msa1400130 | AT1G45249.3 | 41.791 | 134 | 60 | 3 | 20 | 138 | 21 | 151 | 5.30e-21 | 93.2 |
| Msa1400130 | AT1G45249.3 | 37.013 | 154 | 61 | 6 | 195 | 320 | 280 | 425 | 6.98e-15 | 75.5 |
| Msa1400130 | AT4G35900.1 | 51.163 | 86 | 40 | 2 | 237 | 322 | 202 | 285 | 2.08e-16 | 78.6 |
| Msa1400130 | AT2G17770.2 | 48.837 | 86 | 42 | 2 | 237 | 322 | 112 | 195 | 2.36e-14 | 70.9 |
| Msa1400130 | AT5G44080.1 | 32.353 | 204 | 91 | 8 | 96 | 297 | 120 | 278 | 2.72e-14 | 72.8 |
| Msa1400130 | AT1G03970.1 | 31.373 | 204 | 84 | 6 | 96 | 297 | 85 | 234 | 3.38e-14 | 72.0 |
Find 72 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGCGACGAAGCTGGCATTT+AGG | 0.252772 | tig0022418:-23805 | None:intergenic |
| AGAAGACGGTTGATGAAGTT+TGG | 0.321664 | tig0022418:+22105 | Msa1400130:CDS |
| GATTCAACAACACTGACTTT+AGG | 0.341594 | tig0022418:-22278 | None:intergenic |
| TTTGGGTGAGATGACATTAG+AGG | 0.364587 | tig0022418:+22187 | Msa1400130:CDS |
| TCAACCGTCTTCTTGCTTAA+CGG | 0.378968 | tig0022418:-22095 | None:intergenic |
| ACGAAGCTGGCATTTAGGTT+CGG | 0.387515 | tig0022418:-23800 | None:intergenic |
| TCAAGAGATGCAGTCTACTT+TGG | 0.394291 | tig0022418:+22169 | Msa1400130:CDS |
| GCCACCTGACCATCTGTATA+CGG | 0.395127 | tig0022418:-22461 | None:intergenic |
| CGAAGCTGGCATTTAGGTTC+GGG | 0.399153 | tig0022418:-23799 | None:intergenic |
| GGTTAAAGCAGGCGTTGTTT+CGG | 0.403853 | tig0022418:+22217 | Msa1400130:CDS |
| CAACCTAATCTGTCGTTAAC+CGG | 0.406252 | tig0022418:+22071 | Msa1400130:CDS |
| CAAGAGATGCAGTCTACTTT+GGG | 0.419918 | tig0022418:+22170 | Msa1400130:CDS |
| CAGAATCACTTAGGTGACTT+AGG | 0.427650 | tig0022418:+21924 | Msa1400130:CDS |
| AGAAGAGGATGATTAAGAAT+CGG | 0.435534 | tig0022418:+22582 | Msa1400130:CDS |
| TCAAGGTTCATACTACTTAG+TGG | 0.444599 | tig0022418:-21951 | None:intergenic |
| CAAGAGGCTGGAATTGCGGT+TGG | 0.449617 | tig0022418:-21860 | None:intergenic |
| GAAGAGGATGATTAAGAATC+GGG | 0.454965 | tig0022418:+22583 | Msa1400130:CDS |
| GGAGATCAAAGTTTCGCGTC+TGG | 0.466252 | tig0022418:+22762 | Msa1400130:CDS |
| CAGTCATTGCACATGGCAGC+CGG | 0.472274 | tig0022418:+22419 | Msa1400130:CDS |
| CAAAGTTTCGCGTCTGGAAG+AGG | 0.477899 | tig0022418:+22768 | Msa1400130:CDS |
| GGACCGGTTAACGACAGATT+AGG | 0.482657 | tig0022418:-22074 | None:intergenic |
| GCGCTCAAGAGCAAGGAAAC+AGG | 0.483729 | tig0022418:+22616 | Msa1400130:CDS |
| CATGGCAGCCGGTGCTCCAT+CGG | 0.496616 | tig0022418:+22430 | Msa1400130:CDS |
| CGCGCAAGAGGCTGGAATTG+CGG | 0.497998 | tig0022418:-21864 | None:intergenic |
| GATGAAGTTCAGAATCACTT+AGG | 0.504785 | tig0022418:+21915 | Msa1400130:CDS |
| TCTGAACTTCATCAAGGGTA+AGG | 0.505070 | tig0022418:-21905 | None:intergenic |
| GTCCTCTCAATCATGTCCTC+CGG | 0.505376 | tig0022418:-22545 | None:intergenic |
| ATCTGCGAGAAAGCGGGGAC+CGG | 0.507079 | tig0022418:+22526 | Msa1400130:CDS |
| CGTCTTCTTGCTTAACGGAC+CGG | 0.507684 | tig0022418:-22090 | None:intergenic |
| TGGCATTTAGGTTCGGGTGG+TGG | 0.513608 | tig0022418:-23793 | None:intergenic |
| TCAGATAAGTTTCCTACCAC+TGG | 0.525861 | tig0022418:-22494 | None:intergenic |
| GACTGAGCTATGATCTGGCT+CGG | 0.527606 | tig0022418:-22401 | None:intergenic |
| CTGTTGAGAGGAAGCAGAAG+AGG | 0.527853 | tig0022418:+22567 | Msa1400130:CDS |
| TACAGATGGTCAGGTGGCGT+TGG | 0.529554 | tig0022418:+22466 | Msa1400130:CDS |
| ACAGAAATCTGCGAGAAAGC+GGG | 0.534375 | tig0022418:+22520 | Msa1400130:CDS |
| AACGAGGACACAGCGCAAGC+CGG | 0.540740 | tig0022418:+22029 | Msa1400130:CDS |
| AGTGATTCTGAACTTCATCA+AGG | 0.543380 | tig0022418:-21911 | None:intergenic |
| AACGCCGTCCGATGGAGCAC+CGG | 0.546844 | tig0022418:-22438 | None:intergenic |
| CTGCTGCGCGCTCAAGAGCA+AGG | 0.547968 | tig0022418:+22609 | Msa1400130:CDS |
| CGTTCCGTATACAGATGGTC+AGG | 0.553919 | tig0022418:+22457 | Msa1400130:CDS |
| TGCTGTGGATGCTGATAGTG+TGG | 0.563676 | tig0022418:-22356 | None:intergenic |
| TTAGGCATACACAACTGAGT+TGG | 0.564109 | tig0022418:+22741 | Msa1400130:intron |
| TGCGAGAAAGCGGGGACCGG+AGG | 0.566566 | tig0022418:+22529 | Msa1400130:CDS |
| GGCAAACCAATCAATTCGCA+TGG | 0.566719 | tig0022418:+22004 | Msa1400130:CDS |
| CGCAATTCCAGCCTCTTGCG+CGG | 0.571844 | tig0022418:+21865 | Msa1400130:CDS |
| CACAGAAATCTGCGAGAAAG+CGG | 0.574514 | tig0022418:+22519 | Msa1400130:CDS |
| GTATACGGAACGCCGTCCGA+TGG | 0.577145 | tig0022418:-22446 | None:intergenic |
| CTGATGATACGCGACGAAGC+TGG | 0.577434 | tig0022418:-23813 | None:intergenic |
| TGAAAAGCTGAGGAAAGAGA+AGG | 0.578797 | tig0022418:+22795 | Msa1400130:CDS |
| GCAGCCGGTGCTCCATCGGA+CGG | 0.579352 | tig0022418:+22434 | Msa1400130:CDS |
| GCATCCACAGCAAAGTGTGA+TGG | 0.583686 | tig0022418:+22367 | Msa1400130:CDS |
| AGCTGGCATTTAGGTTCGGG+TGG | 0.592805 | tig0022418:-23796 | None:intergenic |
| GCAATGACTGAGCTATGATC+TGG | 0.599628 | tig0022418:-22406 | None:intergenic |
| TACTGTATCCACGGACCATG+TGG | 0.602459 | tig0022418:-22326 | None:intergenic |
| ACAACACTGACTTTAGGAGT+AGG | 0.608724 | tig0022418:-22272 | None:intergenic |
| ATCAATTCGCATGGAAAACG+AGG | 0.609101 | tig0022418:+22013 | Msa1400130:CDS |
| GTGATTCTGAACTTCATCAA+GGG | 0.610620 | tig0022418:-21910 | None:intergenic |
| CATAGCTCAGTCATTGCACA+TGG | 0.615121 | tig0022418:+22412 | Msa1400130:CDS |
| GACCGGAGGACATGATTGAG+AGG | 0.620098 | tig0022418:+22543 | Msa1400130:CDS |
| GCGTTGGCTTCACCAGTGGT+AGG | 0.620523 | tig0022418:+22482 | Msa1400130:CDS |
| GTCGCCATCACACTTTGCTG+TGG | 0.628005 | tig0022418:-22371 | None:intergenic |
| AAGAGGAAAATGAAAAGCTG+AGG | 0.635284 | tig0022418:+22785 | Msa1400130:CDS |
| GGTTGTGCATACTGTATCCA+CGG | 0.641304 | tig0022418:-22335 | None:intergenic |
| TGATTGAGAGGACTGTTGAG+AGG | 0.642725 | tig0022418:+22555 | Msa1400130:CDS |
| GGTGGCGTTGGCTTCACCAG+TGG | 0.643645 | tig0022418:+22478 | Msa1400130:CDS |
| CAGAAATCTGCGAGAAAGCG+GGG | 0.644702 | tig0022418:+22521 | Msa1400130:CDS |
| CCAACAAAACAACGATCATG+AGG | 0.650306 | tig0022418:+22136 | Msa1400130:CDS |
| GACGGCGTTCCGTATACAGA+TGG | 0.652010 | tig0022418:+22452 | Msa1400130:CDS |
| TCCGTATACAGATGGTCAGG+TGG | 0.656234 | tig0022418:+22460 | Msa1400130:CDS |
| CGGTCCGTTAAGCAAGAAGA+CGG | 0.656636 | tig0022418:+22091 | Msa1400130:CDS |
| ACAAAACAACGATCATGAGG+AGG | 0.694318 | tig0022418:+22139 | Msa1400130:CDS |
| GGACCATGTGGAGAAAACTG+TGG | 0.769588 | tig0022418:-22314 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAACAAAAAGATTTTCAA+TGG | - | tig0022418:22852-22871 | None:intergenic | 15.0% |
| !! | ATTTACATTCTTAATTCTTA+TGG | + | tig0022418:22949-22968 | Msa1400130:intron | 15.0% |
| !!! | TTATTTTCTCAAATTATTAC+CGG | + | tig0022418:23375-23394 | Msa1400130:intron | 15.0% |
| !! | AATTTCAATATCTAAACATT+TGG | + | tig0022418:23479-23498 | Msa1400130:intron | 15.0% |
| !!! | ATTAACAAAAAGATTTTCAA+TGG | - | tig0022418:22852-22871 | None:intergenic | 15.0% |
| !! | ATTTACATTCTTAATTCTTA+TGG | + | tig0022418:22949-22968 | Msa1400130:intron | 15.0% |
| !!! | TTATTTTCTCAAATTATTAC+CGG | + | tig0022418:23375-23394 | Msa1400130:intron | 15.0% |
| !! | AATTTCAATATCTAAACATT+TGG | + | tig0022418:23479-23498 | Msa1400130:intron | 15.0% |
| !! | AAATTAGAACTTCAATAACA+TGG | - | tig0022418:22669-22688 | None:intergenic | 20.0% |
| !! | TTTGCTTAAAAGTTATAGTT+TGG | + | tig0022418:22824-22843 | Msa1400130:intron | 20.0% |
| !! | TACTTAATATCAAGAAACTA+AGG | - | tig0022418:22890-22909 | None:intergenic | 20.0% |
| !! | TGAAATATCAGAATAATTCT+AGG | - | tig0022418:23173-23192 | None:intergenic | 20.0% |
| !! | TATTCTGATATTTCATGTAT+TGG | + | tig0022418:23178-23197 | Msa1400130:intron | 20.0% |
| !!! | TACTTATTGACTGTTATTAT+TGG | + | tig0022418:23238-23257 | Msa1400130:intron | 20.0% |
| !!! | GAAATTTGAAATCAGTAAAT+TGG | - | tig0022418:23465-23484 | None:intergenic | 20.0% |
| !! | TTGATTGTACTATATAAACA+AGG | - | tig0022418:23522-23541 | None:intergenic | 20.0% |
| !!! | ATGCTACAAATTCAAATTTT+TGG | + | tig0022418:23663-23682 | Msa1400130:intron | 20.0% |
| !!! | ACAAATTCAAATTTTTGGAA+TGG | + | tig0022418:23668-23687 | Msa1400130:intron | 20.0% |
| !! | AAATTAGAACTTCAATAACA+TGG | - | tig0022418:22669-22688 | None:intergenic | 20.0% |
| !! | TTTGCTTAAAAGTTATAGTT+TGG | + | tig0022418:22824-22843 | Msa1400130:intron | 20.0% |
| !! | TACTTAATATCAAGAAACTA+AGG | - | tig0022418:22890-22909 | None:intergenic | 20.0% |
| !! | TGAAATATCAGAATAATTCT+AGG | - | tig0022418:23173-23192 | None:intergenic | 20.0% |
| !! | TATTCTGATATTTCATGTAT+TGG | + | tig0022418:23178-23197 | Msa1400130:intron | 20.0% |
| !!! | TACTTATTGACTGTTATTAT+TGG | + | tig0022418:23238-23257 | Msa1400130:intron | 20.0% |
| !!! | GAAATTTGAAATCAGTAAAT+TGG | - | tig0022418:23465-23484 | None:intergenic | 20.0% |
| !! | TTGATTGTACTATATAAACA+AGG | - | tig0022418:23522-23541 | None:intergenic | 20.0% |
| !!! | ATGCTACAAATTCAAATTTT+TGG | + | tig0022418:23663-23682 | Msa1400130:intron | 20.0% |
| !!! | ACAAATTCAAATTTTTGGAA+TGG | + | tig0022418:23668-23687 | Msa1400130:intron | 20.0% |
| ! | ATGGAAAAAGTTGTTTACTT+GGG | - | tig0022418:22706-22725 | None:intergenic | 25.0% |
| ! | CTAATTACAGTTATAATCCA+TGG | - | tig0022418:22725-22744 | None:intergenic | 25.0% |
| !! | CATGGATTATAACTGTAATT+AGG | + | tig0022418:22723-22742 | Msa1400130:intron | 25.0% |
| !! | ATCTCAATTTAGTTTCTGTA+CGG | + | tig0022418:22912-22931 | Msa1400130:intron | 25.0% |
| ! | TTCTTAATTCTTATGGTGTT+TGG | + | tig0022418:22956-22975 | Msa1400130:intron | 25.0% |
| ! | TCTTAATTCTTATGGTGTTT+GGG | + | tig0022418:22957-22976 | Msa1400130:intron | 25.0% |
| !! | TTACTGCTTAGAATTTTCTT+TGG | + | tig0022418:23016-23035 | Msa1400130:intron | 25.0% |
| ! | AATGAGTAAAAAGATCATGA+AGG | + | tig0022418:23212-23231 | Msa1400130:intron | 25.0% |
| ! | AATACATATGAAGGATTGAA+AGG | - | tig0022418:23276-23295 | None:intergenic | 25.0% |
| ! | GCAACAAGATTAATAAACAA+AGG | - | tig0022418:23594-23613 | None:intergenic | 25.0% |
| ! | ATGGAAAAAGTTGTTTACTT+GGG | - | tig0022418:22706-22725 | None:intergenic | 25.0% |
| ! | CTAATTACAGTTATAATCCA+TGG | - | tig0022418:22725-22744 | None:intergenic | 25.0% |
| !! | CATGGATTATAACTGTAATT+AGG | + | tig0022418:22723-22742 | Msa1400130:intron | 25.0% |
| !! | ATCTCAATTTAGTTTCTGTA+CGG | + | tig0022418:22912-22931 | Msa1400130:intron | 25.0% |
| ! | TTCTTAATTCTTATGGTGTT+TGG | + | tig0022418:22956-22975 | Msa1400130:intron | 25.0% |
| ! | TCTTAATTCTTATGGTGTTT+GGG | + | tig0022418:22957-22976 | Msa1400130:intron | 25.0% |
| !! | TTACTGCTTAGAATTTTCTT+TGG | + | tig0022418:23016-23035 | Msa1400130:intron | 25.0% |
| ! | AATGAGTAAAAAGATCATGA+AGG | + | tig0022418:23212-23231 | Msa1400130:intron | 25.0% |
| ! | AATACATATGAAGGATTGAA+AGG | - | tig0022418:23276-23295 | None:intergenic | 25.0% |
| ! | GCAACAAGATTAATAAACAA+AGG | - | tig0022418:23594-23613 | None:intergenic | 25.0% |
| !!! | GATGACATTAGAGGATTTTT+TGG | + | tig0022418:22196-22215 | Msa1400130:CDS | 30.0% |
| AGAAGAGGATGATTAAGAAT+CGG | + | tig0022418:22582-22601 | Msa1400130:CDS | 30.0% | |
| CATGGAAAAAGTTGTTTACT+TGG | - | tig0022418:22707-22726 | None:intergenic | 30.0% | |
| !! | CAAGTAAACAACTTTTTCCA+TGG | + | tig0022418:22705-22724 | Msa1400130:intron | 30.0% |
| ! | CTGATATTTCATGTATTGGT+TGG | + | tig0022418:23182-23201 | Msa1400130:intron | 30.0% |
| AGTGTCAGAAATACATATGA+AGG | - | tig0022418:23285-23304 | None:intergenic | 30.0% | |
| TGATATTGACACATAAACAC+CGG | - | tig0022418:23397-23416 | None:intergenic | 30.0% | |
| !!! | TTGCATAGTGTTTTTTGAAG+AGG | + | tig0022418:23610-23629 | Msa1400130:intron | 30.0% |
| ! | TTTTGCATTAAGCATTTGGA+TGG | + | tig0022418:23635-23654 | Msa1400130:intron | 30.0% |
| TTGGAATGGATGTATCTTTA+TGG | + | tig0022418:23682-23701 | Msa1400130:intron | 30.0% | |
| !!! | GATGACATTAGAGGATTTTT+TGG | + | tig0022418:22196-22215 | Msa1400130:CDS | 30.0% |
| AGAAGAGGATGATTAAGAAT+CGG | + | tig0022418:22582-22601 | Msa1400130:CDS | 30.0% | |
| CATGGAAAAAGTTGTTTACT+TGG | - | tig0022418:22707-22726 | None:intergenic | 30.0% | |
| !! | CAAGTAAACAACTTTTTCCA+TGG | + | tig0022418:22705-22724 | Msa1400130:intron | 30.0% |
| ! | CTGATATTTCATGTATTGGT+TGG | + | tig0022418:23182-23201 | Msa1400130:intron | 30.0% |
| AGTGTCAGAAATACATATGA+AGG | - | tig0022418:23285-23304 | None:intergenic | 30.0% | |
| TGATATTGACACATAAACAC+CGG | - | tig0022418:23397-23416 | None:intergenic | 30.0% | |
| !!! | TTGCATAGTGTTTTTTGAAG+AGG | + | tig0022418:23610-23629 | Msa1400130:intron | 30.0% |
| ! | TTTTGCATTAAGCATTTGGA+TGG | + | tig0022418:23635-23654 | Msa1400130:intron | 30.0% |
| TTGGAATGGATGTATCTTTA+TGG | + | tig0022418:23682-23701 | Msa1400130:intron | 30.0% | |
| GTGATTCTGAACTTCATCAA+GGG | - | tig0022418:21913-21932 | None:intergenic | 35.0% | |
| AGTGATTCTGAACTTCATCA+AGG | - | tig0022418:21914-21933 | None:intergenic | 35.0% | |
| GATGAAGTTCAGAATCACTT+AGG | + | tig0022418:21915-21934 | Msa1400130:CDS | 35.0% | |
| TCAAGGTTCATACTACTTAG+TGG | - | tig0022418:21954-21973 | None:intergenic | 35.0% | |
| ! | ACGAGCTTCTGAAAAATGTA+TGG | + | tig0022418:21973-21992 | Msa1400130:CDS | 35.0% |
| ! | GAAAAATGTATGGACTGTTG+AGG | + | tig0022418:21983-22002 | Msa1400130:CDS | 35.0% |
| ACGTTGAAAAACAACTTGTC+CGG | - | tig0022418:22051-22070 | None:intergenic | 35.0% | |
| !!! | GAGGATTTTTTGGTTAAAGC+AGG | + | tig0022418:22206-22225 | Msa1400130:CDS | 35.0% |
| !! | GATTCAACAACACTGACTTT+AGG | - | tig0022418:22281-22300 | None:intergenic | 35.0% |
| GAAGAGGATGATTAAGAATC+GGG | + | tig0022418:22583-22602 | Msa1400130:CDS | 35.0% | |
| AGTTGTTTACTTGGGAGAAA+CGG | - | tig0022418:22698-22717 | None:intergenic | 35.0% | |
| AAGAGGAAAATGAAAAGCTG+AGG | + | tig0022418:22785-22804 | Msa1400130:CDS | 35.0% | |
| GAAATTGTGCACTTTGATGT+TGG | + | tig0022418:22979-22998 | Msa1400130:intron | 35.0% | |
| GTAAAGGGTCACATATTCTA+TGG | - | tig0022418:23042-23061 | None:intergenic | 35.0% | |
| AGTAAGCACAAGACAGTAAA+GGG | - | tig0022418:23057-23076 | None:intergenic | 35.0% | |
| AAGTAAGCACAAGACAGTAA+AGG | - | tig0022418:23058-23077 | None:intergenic | 35.0% | |
| !! | ACTGTCTTGTGCTTACTTTT+AGG | + | tig0022418:23060-23079 | Msa1400130:intron | 35.0% |
| TTTCTGACACTTCAAACTCA+AGG | + | tig0022418:23294-23313 | Msa1400130:intron | 35.0% | |
| TGTCAATATCATGTCAGTGT+CGG | - | tig0022418:23332-23351 | None:intergenic | 35.0% | |
| ! | GGCATTTTGCATTAAGCATT+TGG | + | tig0022418:23631-23650 | Msa1400130:intron | 35.0% |
| ! | GTTTTACATACTCAACTTGC+AGG | + | tig0022418:23744-23763 | Msa1400130:intron | 35.0% |
| GTGATTCTGAACTTCATCAA+GGG | - | tig0022418:21913-21932 | None:intergenic | 35.0% | |
| AGTGATTCTGAACTTCATCA+AGG | - | tig0022418:21914-21933 | None:intergenic | 35.0% | |
| GATGAAGTTCAGAATCACTT+AGG | + | tig0022418:21915-21934 | Msa1400130:CDS | 35.0% | |
| TCAAGGTTCATACTACTTAG+TGG | - | tig0022418:21954-21973 | None:intergenic | 35.0% | |
| ! | ACGAGCTTCTGAAAAATGTA+TGG | + | tig0022418:21973-21992 | Msa1400130:CDS | 35.0% |
| ! | GAAAAATGTATGGACTGTTG+AGG | + | tig0022418:21983-22002 | Msa1400130:CDS | 35.0% |
| ACGTTGAAAAACAACTTGTC+CGG | - | tig0022418:22051-22070 | None:intergenic | 35.0% | |
| !!! | GAGGATTTTTTGGTTAAAGC+AGG | + | tig0022418:22206-22225 | Msa1400130:CDS | 35.0% |
| !! | GATTCAACAACACTGACTTT+AGG | - | tig0022418:22281-22300 | None:intergenic | 35.0% |
| GAAGAGGATGATTAAGAATC+GGG | + | tig0022418:22583-22602 | Msa1400130:CDS | 35.0% | |
| AGTTGTTTACTTGGGAGAAA+CGG | - | tig0022418:22698-22717 | None:intergenic | 35.0% | |
| AAGAGGAAAATGAAAAGCTG+AGG | + | tig0022418:22785-22804 | Msa1400130:CDS | 35.0% | |
| GAAATTGTGCACTTTGATGT+TGG | + | tig0022418:22979-22998 | Msa1400130:intron | 35.0% | |
| GTAAAGGGTCACATATTCTA+TGG | - | tig0022418:23042-23061 | None:intergenic | 35.0% | |
| AGTAAGCACAAGACAGTAAA+GGG | - | tig0022418:23057-23076 | None:intergenic | 35.0% | |
| AAGTAAGCACAAGACAGTAA+AGG | - | tig0022418:23058-23077 | None:intergenic | 35.0% | |
| !! | ACTGTCTTGTGCTTACTTTT+AGG | + | tig0022418:23060-23079 | Msa1400130:intron | 35.0% |
| TTTCTGACACTTCAAACTCA+AGG | + | tig0022418:23294-23313 | Msa1400130:intron | 35.0% | |
| TGTCAATATCATGTCAGTGT+CGG | - | tig0022418:23332-23351 | None:intergenic | 35.0% | |
| ! | GGCATTTTGCATTAAGCATT+TGG | + | tig0022418:23631-23650 | Msa1400130:intron | 35.0% |
| ! | GTTTTACATACTCAACTTGC+AGG | + | tig0022418:23744-23763 | Msa1400130:intron | 35.0% |
| TCTGAACTTCATCAAGGGTA+AGG | - | tig0022418:21908-21927 | None:intergenic | 40.0% | |
| CAGAATCACTTAGGTGACTT+AGG | + | tig0022418:21924-21943 | Msa1400130:CDS | 40.0% | |
| !! | CATTTTTCAGAAGCTCGTCA+AGG | - | tig0022418:21971-21990 | None:intergenic | 40.0% |
| ! | CGTTTTCCATGCGAATTGAT+TGG | - | tig0022418:22013-22032 | None:intergenic | 40.0% |
| ATCAATTCGCATGGAAAACG+AGG | + | tig0022418:22013-22032 | Msa1400130:CDS | 40.0% | |
| CAACCTAATCTGTCGTTAAC+CGG | + | tig0022418:22071-22090 | Msa1400130:CDS | 40.0% | |
| TCAACCGTCTTCTTGCTTAA+CGG | - | tig0022418:22098-22117 | None:intergenic | 40.0% | |
| !! | AGAAGACGGTTGATGAAGTT+TGG | + | tig0022418:22105-22124 | Msa1400130:CDS | 40.0% |
| !! | CCTCATGATCGTTGTTTTGT+TGG | - | tig0022418:22139-22158 | None:intergenic | 40.0% |
| CCAACAAAACAACGATCATG+AGG | + | tig0022418:22136-22155 | Msa1400130:CDS | 40.0% | |
| ACAAAACAACGATCATGAGG+AGG | + | tig0022418:22139-22158 | Msa1400130:CDS | 40.0% | |
| TCAAGAGATGCAGTCTACTT+TGG | + | tig0022418:22169-22188 | Msa1400130:CDS | 40.0% | |
| CAAGAGATGCAGTCTACTTT+GGG | + | tig0022418:22170-22189 | Msa1400130:CDS | 40.0% | |
| TTTGGGTGAGATGACATTAG+AGG | + | tig0022418:22187-22206 | Msa1400130:CDS | 40.0% | |
| !! | ACAACACTGACTTTAGGAGT+AGG | - | tig0022418:22275-22294 | None:intergenic | 40.0% |
| TCAGATAAGTTTCCTACCAC+TGG | - | tig0022418:22497-22516 | None:intergenic | 40.0% | |
| GTTGTTTACTTGGGAGAAAC+GGG | - | tig0022418:22697-22716 | None:intergenic | 40.0% | |
| TTAGGCATACACAACTGAGT+TGG | + | tig0022418:22741-22760 | Msa1400130:intron | 40.0% | |
| TGAAAAGCTGAGGAAAGAGA+AGG | + | tig0022418:22795-22814 | Msa1400130:CDS | 40.0% | |
| TGTCTCTGTCAACACTTCAT+AGG | + | tig0022418:23423-23442 | Msa1400130:intron | 40.0% | |
| TCTGAACTTCATCAAGGGTA+AGG | - | tig0022418:21908-21927 | None:intergenic | 40.0% | |
| CAGAATCACTTAGGTGACTT+AGG | + | tig0022418:21924-21943 | Msa1400130:CDS | 40.0% | |
| !! | CATTTTTCAGAAGCTCGTCA+AGG | - | tig0022418:21971-21990 | None:intergenic | 40.0% |
| ! | CGTTTTCCATGCGAATTGAT+TGG | - | tig0022418:22013-22032 | None:intergenic | 40.0% |
| ATCAATTCGCATGGAAAACG+AGG | + | tig0022418:22013-22032 | Msa1400130:CDS | 40.0% | |
| CAACCTAATCTGTCGTTAAC+CGG | + | tig0022418:22071-22090 | Msa1400130:CDS | 40.0% | |
| TCAACCGTCTTCTTGCTTAA+CGG | - | tig0022418:22098-22117 | None:intergenic | 40.0% | |
| !! | AGAAGACGGTTGATGAAGTT+TGG | + | tig0022418:22105-22124 | Msa1400130:CDS | 40.0% |
| !! | CCTCATGATCGTTGTTTTGT+TGG | - | tig0022418:22139-22158 | None:intergenic | 40.0% |
| CCAACAAAACAACGATCATG+AGG | + | tig0022418:22136-22155 | Msa1400130:CDS | 40.0% | |
| ACAAAACAACGATCATGAGG+AGG | + | tig0022418:22139-22158 | Msa1400130:CDS | 40.0% | |
| TCAAGAGATGCAGTCTACTT+TGG | + | tig0022418:22169-22188 | Msa1400130:CDS | 40.0% | |
| CAAGAGATGCAGTCTACTTT+GGG | + | tig0022418:22170-22189 | Msa1400130:CDS | 40.0% | |
| TTTGGGTGAGATGACATTAG+AGG | + | tig0022418:22187-22206 | Msa1400130:CDS | 40.0% | |
| !! | ACAACACTGACTTTAGGAGT+AGG | - | tig0022418:22275-22294 | None:intergenic | 40.0% |
| TCAGATAAGTTTCCTACCAC+TGG | - | tig0022418:22497-22516 | None:intergenic | 40.0% | |
| GTTGTTTACTTGGGAGAAAC+GGG | - | tig0022418:22697-22716 | None:intergenic | 40.0% | |
| TTAGGCATACACAACTGAGT+TGG | + | tig0022418:22741-22760 | Msa1400130:intron | 40.0% | |
| TGAAAAGCTGAGGAAAGAGA+AGG | + | tig0022418:22795-22814 | Msa1400130:CDS | 40.0% | |
| TGTCTCTGTCAACACTTCAT+AGG | + | tig0022418:23423-23442 | Msa1400130:intron | 40.0% | |
| ! | ATTGAATTTTGCCGCGCAAG+AGG | - | tig0022418:21879-21898 | None:intergenic | 45.0% |
| GGCAAACCAATCAATTCGCA+TGG | + | tig0022418:22004-22023 | Msa1400130:CDS | 45.0% | |
| ! | GGTTAAAGCAGGCGTTGTTT+CGG | + | tig0022418:22217-22236 | Msa1400130:CDS | 45.0% |
| ! | TTGCCACAGTTTTCTCCACA+TGG | + | tig0022418:22311-22330 | Msa1400130:CDS | 45.0% |
| GGTTGTGCATACTGTATCCA+CGG | - | tig0022418:22338-22357 | None:intergenic | 45.0% | |
| GCAATGACTGAGCTATGATC+TGG | - | tig0022418:22409-22428 | None:intergenic | 45.0% | |
| CATAGCTCAGTCATTGCACA+TGG | + | tig0022418:22412-22431 | Msa1400130:CDS | 45.0% | |
| CACAGAAATCTGCGAGAAAG+CGG | + | tig0022418:22519-22538 | Msa1400130:CDS | 45.0% | |
| ACAGAAATCTGCGAGAAAGC+GGG | + | tig0022418:22520-22539 | Msa1400130:CDS | 45.0% | |
| TGATTGAGAGGACTGTTGAG+AGG | + | tig0022418:22555-22574 | Msa1400130:CDS | 45.0% | |
| CTTCAAACTCAAGGCGTGTT+TGG | + | tig0022418:23303-23322 | Msa1400130:intron | 45.0% | |
| !! | TGAAGTGTTGACAGAGACAC+AGG | - | tig0022418:23422-23441 | None:intergenic | 45.0% |
| ! | ACGAAGCTGGCATTTAGGTT+CGG | - | tig0022418:23803-23822 | None:intergenic | 45.0% |
| ! | ATTGAATTTTGCCGCGCAAG+AGG | - | tig0022418:21879-21898 | None:intergenic | 45.0% |
| GGCAAACCAATCAATTCGCA+TGG | + | tig0022418:22004-22023 | Msa1400130:CDS | 45.0% | |
| ! | GGTTAAAGCAGGCGTTGTTT+CGG | + | tig0022418:22217-22236 | Msa1400130:CDS | 45.0% |
| ! | TTGCCACAGTTTTCTCCACA+TGG | + | tig0022418:22311-22330 | Msa1400130:CDS | 45.0% |
| GGTTGTGCATACTGTATCCA+CGG | - | tig0022418:22338-22357 | None:intergenic | 45.0% | |
| GCAATGACTGAGCTATGATC+TGG | - | tig0022418:22409-22428 | None:intergenic | 45.0% | |
| CATAGCTCAGTCATTGCACA+TGG | + | tig0022418:22412-22431 | Msa1400130:CDS | 45.0% | |
| CACAGAAATCTGCGAGAAAG+CGG | + | tig0022418:22519-22538 | Msa1400130:CDS | 45.0% | |
| ACAGAAATCTGCGAGAAAGC+GGG | + | tig0022418:22520-22539 | Msa1400130:CDS | 45.0% | |
| TGATTGAGAGGACTGTTGAG+AGG | + | tig0022418:22555-22574 | Msa1400130:CDS | 45.0% | |
| CTTCAAACTCAAGGCGTGTT+TGG | + | tig0022418:23303-23322 | Msa1400130:intron | 45.0% | |
| !! | TGAAGTGTTGACAGAGACAC+AGG | - | tig0022418:23422-23441 | None:intergenic | 45.0% |
| ! | ACGAAGCTGGCATTTAGGTT+CGG | - | tig0022418:23803-23822 | None:intergenic | 45.0% |
| GGACCGGTTAACGACAGATT+AGG | - | tig0022418:22077-22096 | None:intergenic | 50.0% | |
| ! | CGTCTTCTTGCTTAACGGAC+CGG | - | tig0022418:22093-22112 | None:intergenic | 50.0% |
| CGGTCCGTTAAGCAAGAAGA+CGG | + | tig0022418:22091-22110 | Msa1400130:CDS | 50.0% | |
| GGACCATGTGGAGAAAACTG+TGG | - | tig0022418:22317-22336 | None:intergenic | 50.0% | |
| ! | AGTTTTCTCCACATGGTCCG+TGG | + | tig0022418:22318-22337 | Msa1400130:CDS | 50.0% |
| TACTGTATCCACGGACCATG+TGG | - | tig0022418:22329-22348 | None:intergenic | 50.0% | |
| ! | TGCTGTGGATGCTGATAGTG+TGG | - | tig0022418:22359-22378 | None:intergenic | 50.0% |
| GCATCCACAGCAAAGTGTGA+TGG | + | tig0022418:22367-22386 | Msa1400130:CDS | 50.0% | |
| GACTGAGCTATGATCTGGCT+CGG | - | tig0022418:22404-22423 | None:intergenic | 50.0% | |
| CGTTCCGTATACAGATGGTC+AGG | + | tig0022418:22457-22476 | Msa1400130:CDS | 50.0% | |
| TCCGTATACAGATGGTCAGG+TGG | + | tig0022418:22460-22479 | Msa1400130:CDS | 50.0% | |
| GCCACCTGACCATCTGTATA+CGG | - | tig0022418:22464-22483 | None:intergenic | 50.0% | |
| CAGAAATCTGCGAGAAAGCG+GGG | + | tig0022418:22521-22540 | Msa1400130:CDS | 50.0% | |
| GTCCTCTCAATCATGTCCTC+CGG | - | tig0022418:22548-22567 | None:intergenic | 50.0% | |
| CTGTTGAGAGGAAGCAGAAG+AGG | + | tig0022418:22567-22586 | Msa1400130:CDS | 50.0% | |
| GGAGATCAAAGTTTCGCGTC+TGG | + | tig0022418:22762-22781 | Msa1400130:CDS | 50.0% | |
| CAAAGTTTCGCGTCTGGAAG+AGG | + | tig0022418:22768-22787 | Msa1400130:CDS | 50.0% | |
| ! | CGAAGCTGGCATTTAGGTTC+GGG | - | tig0022418:23802-23821 | None:intergenic | 50.0% |
| GGACCGGTTAACGACAGATT+AGG | - | tig0022418:22077-22096 | None:intergenic | 50.0% | |
| ! | CGTCTTCTTGCTTAACGGAC+CGG | - | tig0022418:22093-22112 | None:intergenic | 50.0% |
| CGGTCCGTTAAGCAAGAAGA+CGG | + | tig0022418:22091-22110 | Msa1400130:CDS | 50.0% | |
| GGACCATGTGGAGAAAACTG+TGG | - | tig0022418:22317-22336 | None:intergenic | 50.0% | |
| ! | AGTTTTCTCCACATGGTCCG+TGG | + | tig0022418:22318-22337 | Msa1400130:CDS | 50.0% |
| TACTGTATCCACGGACCATG+TGG | - | tig0022418:22329-22348 | None:intergenic | 50.0% | |
| ! | TGCTGTGGATGCTGATAGTG+TGG | - | tig0022418:22359-22378 | None:intergenic | 50.0% |
| GCATCCACAGCAAAGTGTGA+TGG | + | tig0022418:22367-22386 | Msa1400130:CDS | 50.0% | |
| GACTGAGCTATGATCTGGCT+CGG | - | tig0022418:22404-22423 | None:intergenic | 50.0% | |
| CGTTCCGTATACAGATGGTC+AGG | + | tig0022418:22457-22476 | Msa1400130:CDS | 50.0% | |
| TCCGTATACAGATGGTCAGG+TGG | + | tig0022418:22460-22479 | Msa1400130:CDS | 50.0% | |
| GCCACCTGACCATCTGTATA+CGG | - | tig0022418:22464-22483 | None:intergenic | 50.0% | |
| CAGAAATCTGCGAGAAAGCG+GGG | + | tig0022418:22521-22540 | Msa1400130:CDS | 50.0% | |
| GTCCTCTCAATCATGTCCTC+CGG | - | tig0022418:22548-22567 | None:intergenic | 50.0% | |
| CTGTTGAGAGGAAGCAGAAG+AGG | + | tig0022418:22567-22586 | Msa1400130:CDS | 50.0% | |
| GGAGATCAAAGTTTCGCGTC+TGG | + | tig0022418:22762-22781 | Msa1400130:CDS | 50.0% | |
| CAAAGTTTCGCGTCTGGAAG+AGG | + | tig0022418:22768-22787 | Msa1400130:CDS | 50.0% | |
| ! | CGAAGCTGGCATTTAGGTTC+GGG | - | tig0022418:23802-23821 | None:intergenic | 50.0% |
| CAAGAGGCTGGAATTGCGGT+TGG | - | tig0022418:21863-21882 | None:intergenic | 55.0% | |
| ! | AATTTTGCCGCGCAAGAGGC+TGG | - | tig0022418:21875-21894 | None:intergenic | 55.0% |
| GTCGCCATCACACTTTGCTG+TGG | - | tig0022418:22374-22393 | None:intergenic | 55.0% | |
| CAGTCATTGCACATGGCAGC+CGG | + | tig0022418:22419-22438 | Msa1400130:CDS | 55.0% | |
| GACGGCGTTCCGTATACAGA+TGG | + | tig0022418:22452-22471 | Msa1400130:CDS | 55.0% | |
| TACAGATGGTCAGGTGGCGT+TGG | + | tig0022418:22466-22485 | Msa1400130:CDS | 55.0% | |
| GACCGGAGGACATGATTGAG+AGG | + | tig0022418:22543-22562 | Msa1400130:CDS | 55.0% | |
| GCGCTCAAGAGCAAGGAAAC+AGG | + | tig0022418:22616-22635 | Msa1400130:CDS | 55.0% | |
| ! | TGGCATTTAGGTTCGGGTGG+TGG | - | tig0022418:23796-23815 | None:intergenic | 55.0% |
| ! | AGCTGGCATTTAGGTTCGGG+TGG | - | tig0022418:23799-23818 | None:intergenic | 55.0% |
| ACGCGACGAAGCTGGCATTT+AGG | - | tig0022418:23808-23827 | None:intergenic | 55.0% | |
| CTGATGATACGCGACGAAGC+TGG | - | tig0022418:23816-23835 | None:intergenic | 55.0% | |
| CAAGAGGCTGGAATTGCGGT+TGG | - | tig0022418:21863-21882 | None:intergenic | 55.0% | |
| ! | AATTTTGCCGCGCAAGAGGC+TGG | - | tig0022418:21875-21894 | None:intergenic | 55.0% |
| GTCGCCATCACACTTTGCTG+TGG | - | tig0022418:22374-22393 | None:intergenic | 55.0% | |
| CAGTCATTGCACATGGCAGC+CGG | + | tig0022418:22419-22438 | Msa1400130:CDS | 55.0% | |
| GACGGCGTTCCGTATACAGA+TGG | + | tig0022418:22452-22471 | Msa1400130:CDS | 55.0% | |
| TACAGATGGTCAGGTGGCGT+TGG | + | tig0022418:22466-22485 | Msa1400130:CDS | 55.0% | |
| GACCGGAGGACATGATTGAG+AGG | + | tig0022418:22543-22562 | Msa1400130:CDS | 55.0% | |
| GCGCTCAAGAGCAAGGAAAC+AGG | + | tig0022418:22616-22635 | Msa1400130:CDS | 55.0% | |
| ! | TGGCATTTAGGTTCGGGTGG+TGG | - | tig0022418:23796-23815 | None:intergenic | 55.0% |
| ! | AGCTGGCATTTAGGTTCGGG+TGG | - | tig0022418:23799-23818 | None:intergenic | 55.0% |
| ACGCGACGAAGCTGGCATTT+AGG | - | tig0022418:23808-23827 | None:intergenic | 55.0% | |
| CTGATGATACGCGACGAAGC+TGG | - | tig0022418:23816-23835 | None:intergenic | 55.0% | |
| CGCGCAAGAGGCTGGAATTG+CGG | - | tig0022418:21867-21886 | None:intergenic | 60.0% | |
| CGCAATTCCAGCCTCTTGCG+CGG | + | tig0022418:21865-21884 | Msa1400130:CDS | 60.0% | |
| AACGAGGACACAGCGCAAGC+CGG | + | tig0022418:22029-22048 | Msa1400130:CDS | 60.0% | |
| GTATACGGAACGCCGTCCGA+TGG | - | tig0022418:22449-22468 | None:intergenic | 60.0% | |
| !! | GCGTTGGCTTCACCAGTGGT+AGG | + | tig0022418:22482-22501 | Msa1400130:CDS | 60.0% |
| ATCTGCGAGAAAGCGGGGAC+CGG | + | tig0022418:22526-22545 | Msa1400130:CDS | 60.0% | |
| CGCGCAAGAGGCTGGAATTG+CGG | - | tig0022418:21867-21886 | None:intergenic | 60.0% | |
| CGCAATTCCAGCCTCTTGCG+CGG | + | tig0022418:21865-21884 | Msa1400130:CDS | 60.0% | |
| AACGAGGACACAGCGCAAGC+CGG | + | tig0022418:22029-22048 | Msa1400130:CDS | 60.0% | |
| GTATACGGAACGCCGTCCGA+TGG | - | tig0022418:22449-22468 | None:intergenic | 60.0% | |
| !! | GCGTTGGCTTCACCAGTGGT+AGG | + | tig0022418:22482-22501 | Msa1400130:CDS | 60.0% |
| ATCTGCGAGAAAGCGGGGAC+CGG | + | tig0022418:22526-22545 | Msa1400130:CDS | 60.0% | |
| CATGGCAGCCGGTGCTCCAT+CGG | + | tig0022418:22430-22449 | Msa1400130:CDS | 65.0% | |
| AACGCCGTCCGATGGAGCAC+CGG | - | tig0022418:22441-22460 | None:intergenic | 65.0% | |
| !! | GGTGGCGTTGGCTTCACCAG+TGG | + | tig0022418:22478-22497 | Msa1400130:CDS | 65.0% |
| CTGCTGCGCGCTCAAGAGCA+AGG | + | tig0022418:22609-22628 | Msa1400130:CDS | 65.0% | |
| CATGGCAGCCGGTGCTCCAT+CGG | + | tig0022418:22430-22449 | Msa1400130:CDS | 65.0% | |
| AACGCCGTCCGATGGAGCAC+CGG | - | tig0022418:22441-22460 | None:intergenic | 65.0% | |
| !! | GGTGGCGTTGGCTTCACCAG+TGG | + | tig0022418:22478-22497 | Msa1400130:CDS | 65.0% |
| CTGCTGCGCGCTCAAGAGCA+AGG | + | tig0022418:22609-22628 | Msa1400130:CDS | 65.0% | |
| GCAGCCGGTGCTCCATCGGA+CGG | + | tig0022418:22434-22453 | Msa1400130:CDS | 70.0% | |
| TGCGAGAAAGCGGGGACCGG+AGG | + | tig0022418:22529-22548 | Msa1400130:CDS | 70.0% | |
| GCAGCCGGTGCTCCATCGGA+CGG | + | tig0022418:22434-22453 | Msa1400130:CDS | 70.0% | |
| TGCGAGAAAGCGGGGACCGG+AGG | + | tig0022418:22529-22548 | Msa1400130:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022418 | gene | 21822 | 23846 | 21822 | ID=Msa1400130;Name=Msa1400130 |
| tig0022418 | mRNA | 21822 | 23846 | 21822 | ID=Msa1400130-mRNA-1;Parent=Msa1400130;Name=Msa1400130-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|3|0|322 |
| tig0022418 | exon | 21822 | 22637 | 21822 | ID=Msa1400130-mRNA-1:exon:17578;Parent=Msa1400130-mRNA-1 |
| tig0022418 | exon | 22745 | 22816 | 22745 | ID=Msa1400130-mRNA-1:exon:17579;Parent=Msa1400130-mRNA-1 |
| tig0022418 | exon | 23766 | 23846 | 23766 | ID=Msa1400130-mRNA-1:exon:17580;Parent=Msa1400130-mRNA-1 |
| tig0022418 | CDS | 21822 | 22637 | 21822 | ID=Msa1400130-mRNA-1:cds;Parent=Msa1400130-mRNA-1 |
| tig0022418 | CDS | 22745 | 22816 | 22745 | ID=Msa1400130-mRNA-1:cds;Parent=Msa1400130-mRNA-1 |
| tig0022418 | CDS | 23766 | 23846 | 23766 | ID=Msa1400130-mRNA-1:cds;Parent=Msa1400130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
