Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1406250 | XP_013452663.1 | 98.013 | 151 | 0 | 1 | 1 | 151 | 1 | 148 | 2.64e-100 | 296 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1406250 | sp|Q9LZD7|MED7B_ARATH | 80.000 | 150 | 27 | 1 | 1 | 150 | 1 | 147 | 8.02e-77 | 230 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1406250 | A0A072UB69 | 98.013 | 151 | 0 | 1 | 1 | 151 | 1 | 148 | 1.26e-100 | 296 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1406250 | TR | MED7 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1406250 | MtrunA17_Chr6g0478701 | 98.013 | 151 | 0 | 1 | 1 | 151 | 1 | 148 | 2.43e-104 | 296 |
| Msa1406250 | MtrunA17_Chr2g0326811 | 97.351 | 151 | 1 | 1 | 1 | 151 | 1 | 148 | 8.11e-104 | 295 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1406250 | AT5G03500.6 | 80.000 | 150 | 27 | 1 | 1 | 150 | 11 | 157 | 7.84e-78 | 230 |
| Msa1406250 | AT5G03500.3 | 80.000 | 150 | 27 | 1 | 1 | 150 | 1 | 147 | 8.15e-78 | 230 |
| Msa1406250 | AT5G03500.4 | 80.000 | 150 | 27 | 1 | 1 | 150 | 1 | 147 | 8.15e-78 | 230 |
| Msa1406250 | AT5G03500.2 | 80.000 | 150 | 27 | 1 | 1 | 150 | 1 | 147 | 8.15e-78 | 230 |
| Msa1406250 | AT5G03500.5 | 80.000 | 150 | 27 | 1 | 1 | 150 | 1 | 147 | 8.15e-78 | 230 |
| Msa1406250 | AT5G03500.7 | 80.000 | 150 | 27 | 1 | 1 | 150 | 1 | 147 | 8.15e-78 | 230 |
| Msa1406250 | AT5G03500.1 | 80.000 | 150 | 27 | 1 | 1 | 150 | 1 | 147 | 8.15e-78 | 230 |
| Msa1406250 | AT5G03220.1 | 80.667 | 150 | 26 | 1 | 1 | 150 | 1 | 147 | 1.44e-72 | 217 |
Find 72 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTGCACTAACCTCCTTTA+AGG | 0.155429 | tig0023205:-69960 | Msa1406250:three_prime_UTR |
| AGCAACTTTGATTCACATTT+TGG | 0.169360 | tig0023205:-71282 | Msa1406250:CDS |
| AGAATTGCAACTACACATTT+TGG | 0.197843 | tig0023205:-71533 | Msa1406250:CDS |
| GTTATTTAGTGAAACCTTAA+AGG | 0.212541 | tig0023205:+69946 | None:intergenic |
| CACCACCACCACCTTATTAC+AGG | 0.297273 | tig0023205:-73518 | Msa1406250:CDS |
| AAGGAGCTGAGGTCACTTAA+TGG | 0.305351 | tig0023205:-71556 | Msa1406250:CDS |
| TGTCCTCCACAGCTTGTTTA+CGG | 0.307186 | tig0023205:+71243 | None:intergenic |
| TAAGATAGCCTACCAATATT+AGG | 0.320366 | tig0023205:+71880 | None:intergenic |
| GGTGCTTAATTTAAAATTAG+AGG | 0.323185 | tig0023205:+69913 | None:intergenic |
| AACGTGTTTAAGCCGATTAA+CGG | 0.328027 | tig0023205:+74417 | None:intergenic |
| GAAGGAACTTATATCTGTTT+CGG | 0.341977 | tig0023205:-73438 | Msa1406250:CDS |
| GACCGCTCTCTGTTTCGGTT+TGG | 0.345257 | tig0023205:-74381 | Msa1406250:five_prime_UTR |
| TCAATTGGTGGTGGAGGCTC+TGG | 0.354209 | tig0023205:+73459 | None:intergenic |
| CGGGAGGAGCTTACTAGGTT+TGG | 0.354843 | tig0023205:+74222 | None:intergenic |
| GATACATCTATGATCTTTGA+AGG | 0.365413 | tig0023205:-73583 | Msa1406250:five_prime_UTR |
| CATACCAACAAATTTGTAGA+AGG | 0.367695 | tig0023205:+71157 | None:intergenic |
| CAGATATAAGTTCCTTCAAT+TGG | 0.376411 | tig0023205:+73444 | None:intergenic |
| GAATTCACTGCGTCCTCATC+AGG | 0.378652 | tig0023205:-71419 | Msa1406250:intron |
| GGAGGCTCTGGAGCAGACTC+AGG | 0.379890 | tig0023205:+73471 | None:intergenic |
| AGAACCTTCTACAAATTTGT+TGG | 0.384093 | tig0023205:-71161 | Msa1406250:CDS |
| AATCTTCTTCTGCCTATTGA+AGG | 0.388386 | tig0023205:-74289 | Msa1406250:five_prime_UTR |
| CATTAAAACATAGTTAGTTA+TGG | 0.391947 | tig0023205:-70020 | Msa1406250:three_prime_UTR |
| TTCAATAGGCAGAAGAAGAT+TGG | 0.392359 | tig0023205:+74291 | None:intergenic |
| TCTTTGTAAAGCCTGTAATA+AGG | 0.393712 | tig0023205:+73507 | None:intergenic |
| AAGCTGTGGAGGACATAAAT+AGG | 0.396665 | tig0023205:-71235 | Msa1406250:intron |
| AGACAATCATGACAACCTTA+AGG | 0.402119 | tig0023205:-69986 | Msa1406250:three_prime_UTR |
| GAGTCATTGGCAACACTTGA+TGG | 0.406036 | tig0023205:-70044 | Msa1406250:three_prime_UTR |
| TCAATAGGCAGAAGAAGATT+GGG | 0.410011 | tig0023205:+74292 | None:intergenic |
| TATTCTAAAGGACCTAATAT+TGG | 0.416061 | tig0023205:-71892 | Msa1406250:intron |
| ACTTATACAAATTTGAATCA+TGG | 0.424889 | tig0023205:-69831 | Msa1406250:three_prime_UTR |
| GACAATCATGACAACCTTAA+GGG | 0.429800 | tig0023205:-69985 | Msa1406250:three_prime_UTR |
| TGCTGCACTAATCCGTTAAT+CGG | 0.435653 | tig0023205:-74429 | Msa1406250:five_prime_UTR |
| CTGTAATAAGGTGGTGGTGG+TGG | 0.437759 | tig0023205:+73519 | None:intergenic |
| ACCCCTTGTTCTTCCAAGCT+TGG | 0.438251 | tig0023205:+71925 | None:intergenic |
| ATTAACAACAACTAACCATA+AGG | 0.461646 | tig0023205:+69892 | None:intergenic |
| GTGCTTAATTTAAAATTAGA+GGG | 0.462554 | tig0023205:+69914 | None:intergenic |
| GTGTTGCCAATGACTCGTTA+AGG | 0.463201 | tig0023205:+70051 | None:intergenic |
| AAGAATCCTTAACGAGTCAT+TGG | 0.477983 | tig0023205:-70057 | Msa1406250:exon |
| TGTTGATTTGATGAAAAGGA+AGG | 0.504287 | tig0023205:+69801 | None:intergenic |
| GAGCCTCCACCACCAATTGA+AGG | 0.507691 | tig0023205:-73456 | Msa1406250:CDS |
| GTTCCTTCAATTGGTGGTGG+AGG | 0.512465 | tig0023205:+73453 | None:intergenic |
| TCTTTGTTGATTTGATGAAA+AGG | 0.512609 | tig0023205:+69797 | None:intergenic |
| TAGGTCCTTTAGAATAGAGT+TGG | 0.518443 | tig0023205:+71899 | None:intergenic |
| ACTCTCCTTGCATATTGTGA+TGG | 0.520397 | tig0023205:+71484 | None:intergenic |
| TAAGTTCCTTCAATTGGTGG+TGG | 0.528553 | tig0023205:+73450 | None:intergenic |
| TAGTGATGTTCTACCAAGCT+TGG | 0.528638 | tig0023205:-71938 | Msa1406250:CDS |
| CTACCAAGCTTGGAAGAACA+AGG | 0.531498 | tig0023205:-71928 | Msa1406250:CDS |
| GAGGACGCAGTGAATTCAAA+AGG | 0.536683 | tig0023205:+71425 | None:intergenic |
| GTACGCCAACTCTATTCTAA+AGG | 0.542516 | tig0023205:-71904 | Msa1406250:CDS |
| TGTAATAAGGTGGTGGTGGT+GGG | 0.546044 | tig0023205:+73520 | None:intergenic |
| ATATAAGTTCCTTCAATTGG+TGG | 0.550214 | tig0023205:+73447 | None:intergenic |
| CAAGAATCACTGTGCATGGT+TGG | 0.552618 | tig0023205:+74255 | None:intergenic |
| AGCTGTACTCCATTTAAAGC+GGG | 0.560286 | tig0023205:-74358 | Msa1406250:five_prime_UTR |
| GAGGCTCTGGAGCAGACTCA+GGG | 0.562875 | tig0023205:+73472 | None:intergenic |
| AGCCTGTAATAAGGTGGTGG+TGG | 0.598331 | tig0023205:+73516 | None:intergenic |
| ATTTAGTGAAACCTTAAAGG+AGG | 0.601516 | tig0023205:+69949 | None:intergenic |
| TAGATTTCAAGAAGGAGCTG+AGG | 0.608725 | tig0023205:-71567 | Msa1406250:CDS |
| AGAGCGCCGTAAACAAGCTG+TGG | 0.612592 | tig0023205:-71249 | Msa1406250:CDS |
| ACCAAGCTTGGAAGAACAAG+GGG | 0.614422 | tig0023205:-71926 | Msa1406250:CDS |
| GTGGATTTAGAAACCCATGA+AGG | 0.616712 | tig0023205:+71120 | None:intergenic |
| AGAGACCATCACAATATGCA+AGG | 0.622612 | tig0023205:-71489 | Msa1406250:CDS |
| GAGCTGTACTCCATTTAAAG+CGG | 0.626400 | tig0023205:-74359 | Msa1406250:five_prime_UTR |
| GGAACTTATATCTGTTTCGG+AGG | 0.626605 | tig0023205:-73435 | Msa1406250:CDS |
| CAATAGGCAGAAGAAGATTG+GGG | 0.630245 | tig0023205:+74293 | None:intergenic |
| TGTTCAAGAATCACTGTGCA+TGG | 0.632262 | tig0023205:+74251 | None:intergenic |
| GCGCCGTAAACAAGCTGTGG+AGG | 0.632418 | tig0023205:-71246 | Msa1406250:CDS |
| GGAACATTGTATACCTGATG+AGG | 0.634197 | tig0023205:+71406 | None:intergenic |
| TTGTAAAGCCTGTAATAAGG+TGG | 0.646875 | tig0023205:+73510 | None:intergenic |
| TACCAAGCTTGGAAGAACAA+GGG | 0.654458 | tig0023205:-71927 | Msa1406250:CDS |
| TAAAGCCTGTAATAAGGTGG+TGG | 0.655388 | tig0023205:+73513 | None:intergenic |
| CTCCAAACCGAAACAGAGAG+CGG | 0.703885 | tig0023205:+74379 | None:intergenic |
| AATAGGCAGAAGAAGATTGG+GGG | 0.709557 | tig0023205:+74294 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAATATTAAAATTGCAA+GGG | + | tig0023205:70871-70890 | None:intergenic | 10.0% |
| !! | ATAATAATATTAAAATTGCA+AGG | + | tig0023205:70872-70891 | None:intergenic | 10.0% |
| !!! | TTGCAATTTTAATATTATTA+TGG | - | tig0023205:70871-70890 | Msa1406250:intron | 10.0% |
| !! | AAAAAATACAATCTATATAA+AGG | + | tig0023205:73534-73553 | None:intergenic | 10.0% |
| !!! | TGATTAGAAGATTTTATTTA+TGG | - | tig0023205:70700-70719 | Msa1406250:intron | 15.0% |
| !! | AATAATATTAAAATTGCAAG+GGG | + | tig0023205:70870-70889 | None:intergenic | 15.0% |
| !! | TTGAAAAATAAGTTCAAAAT+AGG | + | tig0023205:71217-71236 | None:intergenic | 15.0% |
| !! | AAGGAAAAAAATAATGATAT+GGG | + | tig0023205:71823-71842 | None:intergenic | 15.0% |
| !! | AAAGGAAAAAAATAATGATA+TGG | + | tig0023205:71824-71843 | None:intergenic | 15.0% |
| !! | ATGAAACAAATTTCAATAAA+GGG | + | tig0023205:71937-71956 | None:intergenic | 15.0% |
| !!! | AAAAAATAGTTCTTTTTATG+AGG | - | tig0023205:72579-72598 | Msa1406250:intron | 15.0% |
| !!! | ATTTTGTTTTTTAGTTTCAT+TGG | - | tig0023205:73062-73081 | Msa1406250:intron | 15.0% |
| !!! | TGCTATTCATATTTTAATTA+TGG | - | tig0023205:73501-73520 | Msa1406250:CDS | 15.0% |
| !!! | ATTCATATTTTAATTATGGA+AGG | - | tig0023205:73505-73524 | Msa1406250:CDS | 15.0% |
| !!! | TTATGGTTCTAATTACTATA+TGG | - | tig0023205:70888-70907 | Msa1406250:intron | 20.0% |
| !!! | GCTTTAATAATGTCATTTAA+TGG | - | tig0023205:71026-71045 | Msa1406250:intron | 20.0% |
| !!! | TTTTTACCTAATTTTAGCTT+TGG | - | tig0023205:71063-71082 | Msa1406250:intron | 20.0% |
| !!! | AAGCAAATAAAAGAACTTTT+GGG | + | tig0023205:71136-71155 | None:intergenic | 20.0% |
| !!! | AACTTATTTTTCAAAGTGTT+TGG | - | tig0023205:71223-71242 | Msa1406250:intron | 20.0% |
| !!! | ACTTATTTTTCAAAGTGTTT+GGG | - | tig0023205:71224-71243 | Msa1406250:intron | 20.0% |
| !!! | AATTAGCTTAAAATAGCTTA+TGG | + | tig0023205:71309-71328 | None:intergenic | 20.0% |
| !!! | TATTTTAACAGCTTTTGAAA+GGG | + | tig0023205:71614-71633 | None:intergenic | 20.0% |
| !!! | ATATTTTAACAGCTTTTGAA+AGG | + | tig0023205:71615-71634 | None:intergenic | 20.0% |
| !! | AAAATATTGTCATCTAAACA+TGG | - | tig0023205:71628-71647 | Msa1406250:intron | 20.0% |
| !! | AAATATTGTCATCTAAACAT+GGG | - | tig0023205:71629-71648 | Msa1406250:intron | 20.0% |
| !! | TCAAAGGAAATATCTTTAAA+AGG | + | tig0023205:71842-71861 | None:intergenic | 20.0% |
| !! | CATGAAACAAATTTCAATAA+AGG | + | tig0023205:71938-71957 | None:intergenic | 20.0% |
| !! | ATTTGTTTCATGAGAATTAA+AGG | - | tig0023205:71946-71965 | Msa1406250:intron | 20.0% |
| !! | TTAAACTCTAAATTGATTGA+AGG | - | tig0023205:71980-71999 | Msa1406250:intron | 20.0% |
| !! | TAAACTCTAAATTGATTGAA+GGG | - | tig0023205:71981-72000 | Msa1406250:intron | 20.0% |
| !! | AGGAATGATATCATTAAATT+TGG | - | tig0023205:72010-72029 | Msa1406250:intron | 20.0% |
| !!! | AACACATAAACAGATATTTT+TGG | + | tig0023205:72224-72243 | None:intergenic | 20.0% |
| !! | GTATCATGTATTTACTTTAT+AGG | - | tig0023205:72947-72966 | Msa1406250:intron | 20.0% |
| !! | TGAAACTAAAAAACAAAATC+AGG | + | tig0023205:73061-73080 | None:intergenic | 20.0% |
| !!! | TTAGTTCATTCTTTTGAAAA+TGG | - | tig0023205:73162-73181 | Msa1406250:intron | 20.0% |
| !!! | TTCTCTTGTATTTCTATTTT+GGG | + | tig0023205:73280-73299 | None:intergenic | 20.0% |
| !! | AATGTAGTTAAAATTGATAG+TGG | - | tig0023205:73769-73788 | Msa1406250:intron | 20.0% |
| !! | GTATTTCATTAGAAAAAGTT+TGG | + | tig0023205:73819-73838 | None:intergenic | 20.0% |
| !!! | TAATTGTTTTATGATACGTA+TGG | - | tig0023205:74100-74119 | Msa1406250:intron | 20.0% |
| !!! | CATAACTAACTATGTTTTAA+TGG | + | tig0023205:74238-74257 | None:intergenic | 20.0% |
| !! | CATTAAAACATAGTTAGTTA+TGG | - | tig0023205:74236-74255 | Msa1406250:five_prime_UTR | 20.0% |
| !!! | GTGCTTAATTTAAAATTAGA+GGG | + | tig0023205:74345-74364 | None:intergenic | 20.0% |
| !!! | ATTTTAAATTAAGCACCTTA+TGG | - | tig0023205:74349-74368 | Msa1406250:five_prime_UTR | 20.0% |
| !!! | AAAACGATGTTTTTATGTTT+TGG | - | tig0023205:74396-74415 | Msa1406250:five_prime_UTR | 20.0% |
| !!! | AAACGATGTTTTTATGTTTT+GGG | - | tig0023205:74397-74416 | Msa1406250:five_prime_UTR | 20.0% |
| !! | ACTTATACAAATTTGAATCA+TGG | - | tig0023205:74425-74444 | Msa1406250:five_prime_UTR | 20.0% |
| !! | TAATAAAAACCCGCTTTAAA+TGG | + | tig0023205:69910-69929 | None:intergenic | 25.0% |
| !! | TCTCTGATCTTAATAGTTTT+AGG | - | tig0023205:70189-70208 | Msa1406250:intron | 25.0% |
| ! | AACAGATATGATATAACCAA+AGG | - | tig0023205:70242-70261 | Msa1406250:intron | 25.0% |
| !! | TTTTTCCTTACTAAACTCAT+TGG | + | tig0023205:70352-70371 | None:intergenic | 25.0% |
| !! | TATATTGCTTCCTAACTTTT+TGG | + | tig0023205:70385-70404 | None:intergenic | 25.0% |
| ! | CAGACATACTATCATATTTA+AGG | + | tig0023205:70415-70434 | None:intergenic | 25.0% |
| !! | GGGTTTACAAATCTAAAATT+AGG | - | tig0023205:70450-70469 | Msa1406250:intron | 25.0% |
| ! | ATCAATGCAAACAATGAAAT+TGG | - | tig0023205:70487-70506 | Msa1406250:intron | 25.0% |
| !!! | GAAGATTTTATTTATGGCAA+CGG | - | tig0023205:70706-70725 | Msa1406250:intron | 25.0% |
| !! | GAAGCAAATAAAAGAACTTT+TGG | + | tig0023205:71137-71156 | None:intergenic | 25.0% |
| !!! | CTATTTACTATCTTGTTGTT+TGG | - | tig0023205:71654-71673 | Msa1406250:intron | 25.0% |
| ! | CAATCACAACAACAAAAAAA+TGG | + | tig0023205:71684-71703 | None:intergenic | 25.0% |
| !!! | CATTTTTTTGTTGTTGTGAT+TGG | - | tig0023205:71682-71701 | Msa1406250:intron | 25.0% |
| !!! | TTTCCATTTTTGAAGTCTTT+GGG | + | tig0023205:71723-71742 | None:intergenic | 25.0% |
| !!! | TTTTCCATTTTTGAAGTCTT+TGG | + | tig0023205:71724-71743 | None:intergenic | 25.0% |
| ! | ATGTATTTGAGAAGTTTCAA+AGG | + | tig0023205:71858-71877 | None:intergenic | 25.0% |
| !! | AAATACATCTTCGATAGTTT+TGG | - | tig0023205:71870-71889 | Msa1406250:intron | 25.0% |
| ! | AATTTCAATAAAGGGTAGTT+TGG | + | tig0023205:71929-71948 | None:intergenic | 25.0% |
| ! | TCATGAGAATTAAAGGTTAT+TGG | - | tig0023205:71953-71972 | Msa1406250:intron | 25.0% |
| !! | GTTAAGATTTGCGTATATTT+TGG | - | tig0023205:72040-72059 | Msa1406250:intron | 25.0% |
| ! | TATAAACAGCAAAAAAATCC+AGG | + | tig0023205:72075-72094 | None:intergenic | 25.0% |
| !! | TATTCTAAAGGACCTAATAT+TGG | - | tig0023205:72364-72383 | Msa1406250:intron | 25.0% |
| ! | ACATATTAGGTTACAATGTT+AGG | + | tig0023205:72482-72501 | None:intergenic | 25.0% |
| ! | TTAATAATGCCTAAAAGATC+AGG | + | tig0023205:72531-72550 | None:intergenic | 25.0% |
| ! | AAGGTAAGATGTTAACTATA+AGG | + | tig0023205:72666-72685 | None:intergenic | 25.0% |
| !! | ACCTTTTATAGATTTCAAGA+AGG | - | tig0023205:72681-72700 | Msa1406250:intron | 25.0% |
| ! | TCCTTCTTGAAATCTATAAA+AGG | + | tig0023205:72685-72704 | None:intergenic | 25.0% |
| ! | TTTATATACTTATAGCTGTC+TGG | + | tig0023205:72874-72893 | None:intergenic | 25.0% |
| ! | TATATAAACTTGCCTTGATT+TGG | - | tig0023205:72886-72905 | Msa1406250:intron | 25.0% |
| ! | TACAACGAAAATTTCAGAAA+CGG | + | tig0023205:72930-72949 | None:intergenic | 25.0% |
| !!! | TTTTTTAGTTTCATTGGCTA+TGG | - | tig0023205:73068-73087 | Msa1406250:intron | 25.0% |
| !!! | TTTTAAGTTGTAACCTTCAT+GGG | - | tig0023205:73123-73142 | Msa1406250:intron | 25.0% |
| !!! | CTTCTCTTGTATTTCTATTT+TGG | + | tig0023205:73281-73300 | None:intergenic | 25.0% |
| ! | GTAGAAATAAGAATTAGGAT+AGG | + | tig0023205:73367-73386 | None:intergenic | 25.0% |
| ! | GACATGTAGAAATAAGAATT+AGG | + | tig0023205:73372-73391 | None:intergenic | 25.0% |
| !! | TAACTTATGTTCTAGCTATT+AGG | + | tig0023205:73445-73464 | None:intergenic | 25.0% |
| !! | ATTAGAAAAAGTTTGGTAAC+AGG | + | tig0023205:73812-73831 | None:intergenic | 25.0% |
| ! | GTTATTTAGTGAAACCTTAA+AGG | + | tig0023205:74313-74332 | None:intergenic | 25.0% |
| !! | GGTGCTTAATTTAAAATTAG+AGG | + | tig0023205:74346-74365 | None:intergenic | 25.0% |
| ! | ATTAACAACAACTAACCATA+AGG | + | tig0023205:74367-74386 | None:intergenic | 25.0% |
| !! | GAGATTTTAACACCTTCAAT+AGG | + | tig0023205:69982-70001 | None:intergenic | 30.0% |
| AATGATGCAGAGAAGAAATT+CGG | + | tig0023205:70057-70076 | None:intergenic | 30.0% | |
| ! | TTTTGACCTTGCTAAGTAAT+AGG | + | tig0023205:70217-70236 | None:intergenic | 30.0% |
| AATTGTGAAACTTCTACCTT+TGG | + | tig0023205:70261-70280 | None:intergenic | 30.0% | |
| AAGGTAGAAGTTTCACAATT+AGG | - | tig0023205:70261-70280 | Msa1406250:intron | 30.0% | |
| ! | CAACTTCAAACTACATTTTC+TGG | - | tig0023205:70294-70313 | Msa1406250:intron | 30.0% |
| AGATTCCAATGAGTTTAGTA+AGG | - | tig0023205:70344-70363 | Msa1406250:intron | 30.0% | |
| AGTTCACTAACCAAAAAGTT+AGG | - | tig0023205:70372-70391 | Msa1406250:intron | 30.0% | |
| GATACATCTATGATCTTTGA+AGG | - | tig0023205:70673-70692 | Msa1406250:intron | 30.0% | |
| TCTTTGTAAAGCCTGTAATA+AGG | + | tig0023205:70752-70771 | None:intergenic | 30.0% | |
| ATATAAGTTCCTTCAATTGG+TGG | + | tig0023205:70812-70831 | None:intergenic | 30.0% | |
| CAGATATAAGTTCCTTCAAT+TGG | + | tig0023205:70815-70834 | None:intergenic | 30.0% | |
| GAAGGAACTTATATCTGTTT+CGG | - | tig0023205:70818-70837 | Msa1406250:intron | 30.0% | |
| ! | TGACACTTGAATAGACATTT+TGG | - | tig0023205:70974-70993 | Msa1406250:intron | 30.0% |
| !! | TTGAATAGACATTTTGGAAG+AGG | - | tig0023205:70980-70999 | Msa1406250:intron | 30.0% |
| !! | TATTTTTCAAAGTGTTTGGG+TGG | - | tig0023205:71227-71246 | Msa1406250:intron | 30.0% |
| ACCTTATGAAAACAGCTTAT+AGG | - | tig0023205:71348-71367 | Msa1406250:intron | 30.0% | |
| !! | TCCTATAAGCTGTTTTCATA+AGG | + | tig0023205:71352-71371 | None:intergenic | 30.0% |
| ATTGCAATTAAGCGTTTCTA+AGG | + | tig0023205:71446-71465 | None:intergenic | 30.0% | |
| AATTGCAATGCTTATCCAAA+CGG | - | tig0023205:71457-71476 | Msa1406250:CDS | 30.0% | |
| CAACTCTAACTATTTGGTTA+AGG | - | tig0023205:71585-71604 | Msa1406250:intron | 30.0% | |
| !!! | TGGGATAATTTTGAGACTTT+GGG | + | tig0023205:71804-71823 | None:intergenic | 30.0% |
| !!! | ATGGGATAATTTTGAGACTT+TGG | + | tig0023205:71805-71824 | None:intergenic | 30.0% |
| !!! | AATTGATTGAAGGGCATTTT+AGG | - | tig0023205:71990-72009 | Msa1406250:intron | 30.0% |
| ! | ATTTTATGCAGAAGCCTATT+TGG | - | tig0023205:72248-72267 | Msa1406250:intron | 30.0% |
| TAAGATAGCCTACCAATATT+AGG | + | tig0023205:72379-72398 | None:intergenic | 30.0% | |
| ACTATCTGTAACAACTCATA+CGG | + | tig0023205:72450-72469 | None:intergenic | 30.0% | |
| TTTATGAGGAAATGCTGAAT+TGG | - | tig0023205:72593-72612 | Msa1406250:intron | 30.0% | |
| ! | AGAATTGCAACTACACATTT+TGG | - | tig0023205:72723-72742 | Msa1406250:intron | 30.0% |
| ACAACGAAAATTTCAGAAAC+GGG | + | tig0023205:72929-72948 | None:intergenic | 30.0% | |
| ! | AGCAACTTTGATTCACATTT+TGG | - | tig0023205:72974-72993 | Msa1406250:intron | 30.0% |
| AGAACCTTCTACAAATTTGT+TGG | - | tig0023205:73095-73114 | Msa1406250:intron | 30.0% | |
| CATACCAACAAATTTGTAGA+AGG | + | tig0023205:73102-73121 | None:intergenic | 30.0% | |
| !!! | CTTTTAAGTTGTAACCTTCA+TGG | - | tig0023205:73122-73141 | Msa1406250:intron | 30.0% |
| CAAAAGAATGAACTAACTTG+TGG | + | tig0023205:73158-73177 | None:intergenic | 30.0% | |
| AATCAGTTAAGGTTGTTTAC+TGG | + | tig0023205:73233-73252 | None:intergenic | 30.0% | |
| ! | TAAACAACCTTAACTGATTC+AGG | - | tig0023205:73234-73253 | Msa1406250:intron | 30.0% |
| ! | AAACAACCTTAACTGATTCA+GGG | - | tig0023205:73235-73254 | Msa1406250:intron | 30.0% |
| ATGTTCCAAGAGTTTACTAA+AGG | + | tig0023205:73397-73416 | None:intergenic | 30.0% | |
| ! | ACTCTTGGAACATTTTCATT+AGG | - | tig0023205:73404-73423 | Msa1406250:intron | 30.0% |
| CTTTCAATAAAACAAAACCC+TGG | + | tig0023205:73631-73650 | None:intergenic | 30.0% | |
| ! | AAGAGTTGATTATAACTCTC+TGG | - | tig0023205:73648-73667 | Msa1406250:intron | 30.0% |
| ! | AAAAAGTTTGGTAACAGGAT+TGG | + | tig0023205:73807-73826 | None:intergenic | 30.0% |
| ATGTTTGATGCTATGATTTC+TGG | + | tig0023205:73861-73880 | None:intergenic | 30.0% | |
| ! | CTTTTCCATAACTTGAAAGA+CGG | - | tig0023205:73885-73904 | Msa1406250:intron | 30.0% |
| AAAATGTACAAAGATACACC+AGG | + | tig0023205:73913-73932 | None:intergenic | 30.0% | |
| AAATGACTCTAATAGTGCTT+TGG | - | tig0023205:73951-73970 | Msa1406250:intron | 30.0% | |
| !! | CTTGATTGGTCTAATTTATG+AGG | - | tig0023205:73977-73996 | Msa1406250:intron | 30.0% |
| GTTAGTTCACCAAAATTGAT+AGG | - | tig0023205:74007-74026 | Msa1406250:intron | 30.0% | |
| !! | TAAAAGAGAAGCATTGTCTT+TGG | + | tig0023205:74072-74091 | None:intergenic | 30.0% |
| CTGAAAAGAAAAGAGAAAGT+AGG | + | tig0023205:74161-74180 | None:intergenic | 30.0% | |
| ! | CTACTTTCTCTTTTCTTTTC+AGG | - | tig0023205:74159-74178 | Msa1406250:intron | 30.0% |
| ATTTAGTGAAACCTTAAAGG+AGG | + | tig0023205:74310-74329 | None:intergenic | 30.0% | |
| AACGTGTTTAAGCCGATTAA+CGG | + | tig0023205:69842-69861 | None:intergenic | 35.0% | |
| TCAATAGGCAGAAGAAGATT+GGG | + | tig0023205:69967-69986 | None:intergenic | 35.0% | |
| TTCAATAGGCAGAAGAAGAT+TGG | + | tig0023205:69968-69987 | None:intergenic | 35.0% | |
| AATCTTCTTCTGCCTATTGA+AGG | - | tig0023205:69967-69986 | Msa1406250:three_prime_UTR | 35.0% | |
| ATGATGCAGAGAAGAAATTC+GGG | + | tig0023205:70056-70075 | None:intergenic | 35.0% | |
| ! | TTGGCTCGTCTTAAATCTAA+GGG | + | tig0023205:70101-70120 | None:intergenic | 35.0% |
| ! | TTAGATTTAAGACGAGCCAA+GGG | - | tig0023205:70101-70120 | Msa1406250:intron | 35.0% |
| TAGGATCCTATTACTTAGCA+AGG | - | tig0023205:70208-70227 | Msa1406250:intron | 35.0% | |
| TGTCTGTATATGCAATGAAG+TGG | - | tig0023205:70429-70448 | Msa1406250:intron | 35.0% | |
| GTCTGTATATGCAATGAAGT+GGG | - | tig0023205:70430-70449 | Msa1406250:intron | 35.0% | |
| !! | CATTGTTTGCATTGATGATG+AGG | + | tig0023205:70483-70502 | None:intergenic | 35.0% |
| ! | TGCAATTTTCGTTCCTGTTA+TGG | - | tig0023205:70530-70549 | Msa1406250:intron | 35.0% |
| GTTCCTGTTATGGTTAAGTT+GGG | - | tig0023205:70540-70559 | Msa1406250:intron | 35.0% | |
| TTGTAAAGCCTGTAATAAGG+TGG | + | tig0023205:70749-70768 | None:intergenic | 35.0% | |
| ! | CAAGTGTCATTGTAATAGCA+GGG | + | tig0023205:70963-70982 | None:intergenic | 35.0% |
| ! | TCAAGTGTCATTGTAATAGC+AGG | + | tig0023205:70964-70983 | None:intergenic | 35.0% |
| CACATGCCAAAGCTAAAATT+AGG | + | tig0023205:71072-71091 | None:intergenic | 35.0% | |
| ! | TGTGCGTTATTCTAAAAGCT+TGG | - | tig0023205:71088-71107 | Msa1406250:intron | 35.0% |
| ! | TCTAAAAGCTTGGAGCTTTT+TGG | - | tig0023205:71098-71117 | Msa1406250:intron | 35.0% |
| !! | TTAAGCGTTTCTAAGGCAAA+GGG | + | tig0023205:71439-71458 | None:intergenic | 35.0% |
| !! | ATTAAGCGTTTCTAAGGCAA+AGG | + | tig0023205:71440-71459 | None:intergenic | 35.0% |
| ATTGCAATGCTTATCCAAAC+GGG | - | tig0023205:71458-71477 | Msa1406250:CDS | 35.0% | |
| AAGCCCAAAGACTTCAAAAA+TGG | - | tig0023205:71717-71736 | Msa1406250:intron | 35.0% | |
| TATCGGTATCAGATACATGT+TGG | + | tig0023205:71756-71775 | None:intergenic | 35.0% | |
| CGGTAGTATCAAATGTGTAT+CGG | + | tig0023205:71773-71792 | None:intergenic | 35.0% | |
| CGATACACATTTGATACTAC+CGG | - | tig0023205:71771-71790 | Msa1406250:intron | 35.0% | |
| !!! | TACATCTTCGATAGTTTTGG+TGG | - | tig0023205:71873-71892 | Msa1406250:intron | 35.0% |
| !!! | ACATCTTCGATAGTTTTGGT+GGG | - | tig0023205:71874-71893 | Msa1406250:intron | 35.0% |
| ACAGCAAAAAAATCCAGGTT+TGG | + | tig0023205:72070-72089 | None:intergenic | 35.0% | |
| ! | TGCTGTTTATATCTGTGATC+AGG | - | tig0023205:72084-72103 | Msa1406250:intron | 35.0% |
| TCAACCTTTCTCAAGGTTTA+TGG | + | tig0023205:72153-72172 | None:intergenic | 35.0% | |
| !! | TAGGTCCTTTAGAATAGAGT+TGG | + | tig0023205:72360-72379 | None:intergenic | 35.0% |
| CTAAAGGACCTAATATTGGT+AGG | - | tig0023205:72368-72387 | Msa1406250:intron | 35.0% | |
| GTTGTTACAGATAGTTGTGA+AGG | - | tig0023205:72455-72474 | Msa1406250:intron | 35.0% | |
| ACTATACACGGTCACATATT+AGG | + | tig0023205:72495-72514 | None:intergenic | 35.0% | |
| AGACTCTAATTTCTTCACAC+TGG | - | tig0023205:73201-73220 | Msa1406250:intron | 35.0% | |
| GACTCTAATTTCTTCACACT+GGG | - | tig0023205:73202-73221 | Msa1406250:intron | 35.0% | |
| TGAATTCCCTGAATCAGTTA+AGG | + | tig0023205:73244-73263 | None:intergenic | 35.0% | |
| TGCTAGTTAGTTGTTGTATC+TGG | + | tig0023205:73340-73359 | None:intergenic | 35.0% | |
| GTCTTCCTTTAGTAAACTCT+TGG | - | tig0023205:73389-73408 | Msa1406250:intron | 35.0% | |
| ! | TTATGTTCTAGCTATTAGGC+AGG | + | tig0023205:73441-73460 | None:intergenic | 35.0% |
| ! | CACTTTCCCATTTTAAACTG+CGG | - | tig0023205:73714-73733 | Msa1406250:intron | 35.0% |
| ! | TTCCATCCGCAGTTTAAAAT+GGG | + | tig0023205:73723-73742 | None:intergenic | 35.0% |
| !! | CGTCTTTCAAGTTATGGAAA+AGG | + | tig0023205:73887-73906 | None:intergenic | 35.0% |
| !! | TAGTGCTTTGGAAACTTGAT+TGG | - | tig0023205:73963-73982 | Msa1406250:intron | 35.0% |
| ! | ATGGTTGCTCCTATCAATTT+TGG | + | tig0023205:74019-74038 | None:intergenic | 35.0% |
| !! | CTTTCTCTTTTCTTTTCAGG+AGG | - | tig0023205:74162-74181 | Msa1406250:intron | 35.0% |
| AAGAATCCTTAACGAGTCAT+TGG | - | tig0023205:74199-74218 | Msa1406250:intron | 35.0% | |
| AGACAATCATGACAACCTTA+AGG | - | tig0023205:74270-74289 | Msa1406250:five_prime_UTR | 35.0% | |
| GACAATCATGACAACCTTAA+GGG | - | tig0023205:74271-74290 | Msa1406250:five_prime_UTR | 35.0% | |
| ! | GTTAGTGCAATTTTCCCTTA+AGG | + | tig0023205:74288-74307 | None:intergenic | 35.0% |
| AATTGCACTAACCTCCTTTA+AGG | - | tig0023205:74296-74315 | Msa1406250:five_prime_UTR | 35.0% | |
| TGCTGCACTAATCCGTTAAT+CGG | - | tig0023205:69827-69846 | Msa1406250:three_prime_UTR | 40.0% | |
| GAGCTGTACTCCATTTAAAG+CGG | - | tig0023205:69897-69916 | Msa1406250:three_prime_UTR | 40.0% | |
| ! | AGCTGTACTCCATTTAAAGC+GGG | - | tig0023205:69898-69917 | Msa1406250:three_prime_UTR | 40.0% |
| AATAGGCAGAAGAAGATTGG+GGG | + | tig0023205:69965-69984 | None:intergenic | 40.0% | |
| CAATAGGCAGAAGAAGATTG+GGG | + | tig0023205:69966-69985 | None:intergenic | 40.0% | |
| TGTTCAAGAATCACTGTGCA+TGG | + | tig0023205:70008-70027 | None:intergenic | 40.0% | |
| ! | CTTGGCTCGTCTTAAATCTA+AGG | + | tig0023205:70102-70121 | None:intergenic | 40.0% |
| ! | CTTAGATTTAAGACGAGCCA+AGG | - | tig0023205:70100-70119 | Msa1406250:intron | 40.0% |
| ! | TTTTGCTCTTGCAAATCCCT+TGG | + | tig0023205:70120-70139 | None:intergenic | 40.0% |
| CGTTCCTGTTATGGTTAAGT+TGG | - | tig0023205:70539-70558 | Msa1406250:intron | 40.0% | |
| AGACCCAACTTAACCATAAC+AGG | + | tig0023205:70546-70565 | None:intergenic | 40.0% | |
| ! | AATGAGACATGAAGAGTGCA+TGG | + | tig0023205:70619-70638 | None:intergenic | 40.0% |
| TAAAGCCTGTAATAAGGTGG+TGG | + | tig0023205:70746-70765 | None:intergenic | 40.0% | |
| TAAGTTCCTTCAATTGGTGG+TGG | + | tig0023205:70809-70828 | None:intergenic | 40.0% | |
| GGAACTTATATCTGTTTCGG+AGG | - | tig0023205:70821-70840 | Msa1406250:intron | 40.0% | |
| AGTCGTGAAATCAACCTCAT+GGG | + | tig0023205:71535-71554 | None:intergenic | 40.0% | |
| TGGCAGCAACTCTAACTATT+TGG | - | tig0023205:71579-71598 | Msa1406250:intron | 40.0% | |
| ! | TTTGAAGTCTTTGGGCTTCA+TGG | + | tig0023205:71715-71734 | None:intergenic | 40.0% |
| CACATTTGATACTACCGGAT+AGG | - | tig0023205:71776-71795 | Msa1406250:intron | 40.0% | |
| !!! | CATCTTCGATAGTTTTGGTG+GGG | - | tig0023205:71875-71894 | Msa1406250:intron | 40.0% |
| !! | ATATTTTGGACCACCAAACC+TGG | - | tig0023205:72054-72073 | Msa1406250:intron | 40.0% |
| GCAAAAAAATCCAGGTTTGG+TGG | + | tig0023205:72067-72086 | None:intergenic | 40.0% | |
| !! | ATCAGGTTGAGTTCAGTCTA+GGG | - | tig0023205:72101-72120 | Msa1406250:intron | 40.0% |
| TCAAGGTTTATGGTTGGATG+AGG | + | tig0023205:72143-72162 | None:intergenic | 40.0% | |
| CCTTTCTCAAGGTTTATGGT+TGG | + | tig0023205:72149-72168 | None:intergenic | 40.0% | |
| CCAACCATAAACCTTGAGAA+AGG | - | tig0023205:72146-72165 | Msa1406250:intron | 40.0% | |
| ACTGAACTCAACCTTTCTCA+AGG | + | tig0023205:72160-72179 | None:intergenic | 40.0% | |
| TGAGTTCAGTCTTGCAAAAC+AGG | - | tig0023205:72170-72189 | Msa1406250:intron | 40.0% | |
| GAGTTCAGTCTTGCAAAACA+GGG | - | tig0023205:72171-72190 | Msa1406250:intron | 40.0% | |
| ACGATATGATCACGCCAAAT+AGG | + | tig0023205:72265-72284 | None:intergenic | 40.0% | |
| TAGTGATGTTCTACCAAGCT+TGG | - | tig0023205:72318-72337 | Msa1406250:intron | 40.0% | |
| TACCAAGCTTGGAAGAACAA+GGG | - | tig0023205:72329-72348 | Msa1406250:intron | 40.0% | |
| GTACGCCAACTCTATTCTAA+AGG | - | tig0023205:72352-72371 | Msa1406250:intron | 40.0% | |
| CCACAAGTCTAGACTATACA+CGG | + | tig0023205:72507-72526 | None:intergenic | 40.0% | |
| CGTGTATAGTCTAGACTTGT+GGG | - | tig0023205:72505-72524 | Msa1406250:intron | 40.0% | |
| TAGATTTCAAGAAGGAGCTG+AGG | - | tig0023205:72689-72708 | Msa1406250:intron | 40.0% | |
| AGAGACCATCACAATATGCA+AGG | - | tig0023205:72767-72786 | Msa1406250:intron | 40.0% | |
| ACTCTCCTTGCATATTGTGA+TGG | + | tig0023205:72775-72794 | None:intergenic | 40.0% | |
| GGAACATTGTATACCTGATG+AGG | + | tig0023205:72853-72872 | None:intergenic | 40.0% | |
| AAGCTGTGGAGGACATAAAT+AGG | - | tig0023205:73021-73040 | Msa1406250:intron | 40.0% | |
| GTGGATTTAGAAACCCATGA+AGG | + | tig0023205:73139-73158 | None:intergenic | 40.0% | |
| TGTATCTGGTGAGTCAGTTA+AGG | + | tig0023205:73326-73345 | None:intergenic | 40.0% | |
| ATGGGTGTATGAACCTATGA+GGG | + | tig0023205:73599-73618 | None:intergenic | 40.0% | |
| ! | TTCCCATTTTAAACTGCGGA+TGG | - | tig0023205:73718-73737 | Msa1406250:intron | 40.0% |
| CTTCCATCCGCAGTTTAAAA+TGG | + | tig0023205:73724-73743 | None:intergenic | 40.0% | |
| !! | AGGAACCGTCTTTCAAGTTA+TGG | + | tig0023205:73893-73912 | None:intergenic | 40.0% |
| ATAACTTGAAAGACGGTTCC+TGG | - | tig0023205:73892-73911 | Msa1406250:intron | 40.0% | |
| TGACAAAACTGGGCAAAGAA+GGG | + | tig0023205:74046-74065 | None:intergenic | 40.0% | |
| ATGACAAAACTGGGCAAAGA+AGG | + | tig0023205:74047-74066 | None:intergenic | 40.0% | |
| !! | TTCTTTGCCCAGTTTTGTCA+TGG | - | tig0023205:74046-74065 | Msa1406250:intron | 40.0% |
| TCTTTGGCCATGACAAAACT+GGG | + | tig0023205:74056-74075 | None:intergenic | 40.0% | |
| !! | GTTTTGACCGCTCTCTGTTT+CGG | - | tig0023205:69870-69889 | Msa1406250:three_prime_UTR | 45.0% |
| CAAGAATCACTGTGCATGGT+TGG | + | tig0023205:70004-70023 | None:intergenic | 45.0% | |
| AAATTCGGGAGGAGCTTACT+AGG | + | tig0023205:70042-70061 | None:intergenic | 45.0% | |
| ATGCAGAGAAGAAATTCGGG+AGG | + | tig0023205:70053-70072 | None:intergenic | 45.0% | |
| !! | TGTAATAAGGTGGTGGTGGT+GGG | + | tig0023205:70739-70758 | None:intergenic | 45.0% |
| CATGACAACTTTGCTGCGTT+TGG | - | tig0023205:71175-71194 | Msa1406250:CDS | 45.0% | |
| GTTAGAGTAAGCTCCCATCA+TGG | - | tig0023205:71487-71506 | Msa1406250:CDS | 45.0% | |
| TCCTTAAACCCTGCCATGAT+GGG | + | tig0023205:71503-71522 | None:intergenic | 45.0% | |
| TTCCTTAAACCCTGCCATGA+TGG | + | tig0023205:71504-71523 | None:intergenic | 45.0% | |
| TCATGGCAGGGTTTAAGGAA+TGG | - | tig0023205:71504-71523 | Msa1406250:CDS | 45.0% | |
| AAGGAATGGTTAGACCCATG+AGG | - | tig0023205:71518-71537 | Msa1406250:CDS | 45.0% | |
| GAGTCGTGAAATCAACCTCA+TGG | + | tig0023205:71536-71555 | None:intergenic | 45.0% | |
| ACTCAAATGAGTGACCTCCT+AGG | - | tig0023205:71552-71571 | Msa1406250:CDS | 45.0% | |
| AAGTCTTTGGGCTTCATGGA+TGG | + | tig0023205:71711-71730 | None:intergenic | 45.0% | |
| TGAGACTTTGGGTACCTATC+CGG | + | tig0023205:71793-71812 | None:intergenic | 45.0% | |
| !! | GATCAGGTTGAGTTCAGTCT+AGG | - | tig0023205:72100-72119 | Msa1406250:intron | 45.0% |
| TTATGGTTGGATGAGGCACA+TGG | + | tig0023205:72136-72155 | None:intergenic | 45.0% | |
| CTACCAAGCTTGGAAGAACA+AGG | - | tig0023205:72328-72347 | Msa1406250:intron | 45.0% | |
| ACCAAGCTTGGAAGAACAAG+GGG | - | tig0023205:72330-72349 | Msa1406250:intron | 45.0% | |
| CCGTGTATAGTCTAGACTTG+TGG | - | tig0023205:72504-72523 | Msa1406250:intron | 45.0% | |
| ! | ACTTGTGGGCCTGATCTTTT+AGG | - | tig0023205:72519-72538 | Msa1406250:intron | 45.0% |
| CTAGTAGAGACACCATGCAT+TGG | + | tig0023205:72630-72649 | None:intergenic | 45.0% | |
| AAGGAGCTGAGGTCACTTAA+TGG | - | tig0023205:72700-72719 | Msa1406250:intron | 45.0% | |
| GAGGACGCAGTGAATTCAAA+AGG | + | tig0023205:72834-72853 | None:intergenic | 45.0% | |
| !! | TGCCTTGATTTGGATGCTTC+TGG | - | tig0023205:72896-72915 | Msa1406250:intron | 45.0% |
| !! | GACCAGAAGCATCCAAATCA+AGG | + | tig0023205:72901-72920 | None:intergenic | 45.0% |
| ! | TGTCCTCCACAGCTTGTTTA+CGG | + | tig0023205:73016-73035 | None:intergenic | 45.0% |
| GGTGAGTCAGTTAAGGTTGT+TGG | + | tig0023205:73319-73338 | None:intergenic | 45.0% | |
| TGCAAAACCCGACGAATCTA+AGG | - | tig0023205:73564-73583 | Msa1406250:five_prime_UTR | 45.0% | |
| CATGGGTGTATGAACCTATG+AGG | + | tig0023205:73600-73619 | None:intergenic | 45.0% | |
| CTCATAGGTTCATACACCCA+TGG | - | tig0023205:73598-73617 | Msa1406250:five_prime_UTR | 45.0% | |
| AAACCCTGGTAAGTAGCCAT+GGG | + | tig0023205:73617-73636 | None:intergenic | 45.0% | |
| AAAACCCTGGTAAGTAGCCA+TGG | + | tig0023205:73618-73637 | None:intergenic | 45.0% | |
| GTCTTTGGCCATGACAAAAC+TGG | + | tig0023205:74057-74076 | None:intergenic | 45.0% | |
| GTGTTGCCAATGACTCGTTA+AGG | + | tig0023205:74208-74227 | None:intergenic | 45.0% | |
| GAGTCATTGGCAACACTTGA+TGG | - | tig0023205:74212-74231 | Msa1406250:intron | 45.0% | |
| CTCCAAACCGAAACAGAGAG+CGG | + | tig0023205:69880-69899 | None:intergenic | 50.0% | |
| !! | CTGTAATAAGGTGGTGGTGG+TGG | + | tig0023205:70740-70759 | None:intergenic | 50.0% |
| CACCACCACCACCTTATTAC+AGG | - | tig0023205:70738-70757 | Msa1406250:intron | 50.0% | |
| ! | AGCCTGTAATAAGGTGGTGG+TGG | + | tig0023205:70743-70762 | None:intergenic | 50.0% |
| !! | GTTCCTTCAATTGGTGGTGG+AGG | + | tig0023205:70806-70825 | None:intergenic | 50.0% |
| AATGCTTATCCAAACGGGCC+TGG | - | tig0023205:71463-71482 | Msa1406250:CDS | 50.0% | |
| TGGGAGCTTACTCTAACACC+AGG | + | tig0023205:71484-71503 | None:intergenic | 50.0% | |
| AGTAAGCTCCCATCATGGCA+GGG | - | tig0023205:71492-71511 | Msa1406250:CDS | 50.0% | |
| TCCCATCATGGCAGGGTTTA+AGG | - | tig0023205:71499-71518 | Msa1406250:CDS | 50.0% | |
| TGAGTGACCTCCTAGGCATA+TGG | - | tig0023205:71559-71578 | Msa1406250:CDS | 50.0% | |
| AGAGTTGCTGCCATATGCCT+AGG | + | tig0023205:71572-71591 | None:intergenic | 50.0% | |
| !!! | CGATAGTTTTGGTGGGGACA+AGG | - | tig0023205:71881-71900 | Msa1406250:intron | 50.0% |
| !! | GTTTTGGTGGGGACAAGGAT+TGG | - | tig0023205:71886-71905 | Msa1406250:intron | 50.0% |
| ACCCCTTGTTCTTCCAAGCT+TGG | + | tig0023205:72334-72353 | None:intergenic | 50.0% | |
| !! | GTCACAAAAGCGCCAATGCA+TGG | - | tig0023205:72615-72634 | Msa1406250:intron | 50.0% |
| GAATTCACTGCGTCCTCATC+AGG | - | tig0023205:72837-72856 | Msa1406250:intron | 50.0% | |
| ! | AACCCGACGAATCTAAGGCT+TGG | - | tig0023205:73569-73588 | Msa1406250:five_prime_UTR | 50.0% |
| GACCAAGCCTTAGATTCGTC+GGG | + | tig0023205:73574-73593 | None:intergenic | 50.0% | |
| GGACCAAGCCTTAGATTCGT+CGG | + | tig0023205:73575-73594 | None:intergenic | 50.0% | |
| GGTGTATGAACCTATGAGGG+AGG | + | tig0023205:73596-73615 | None:intergenic | 50.0% | |
| TACACCCATGGCTACTTACC+AGG | - | tig0023205:73610-73629 | Msa1406250:intron | 50.0% | |
| ACACCCATGGCTACTTACCA+GGG | - | tig0023205:73611-73630 | Msa1406250:intron | 50.0% | |
| CTGGGCAAAGAAGGGAGAAA+TGG | + | tig0023205:74038-74057 | None:intergenic | 50.0% | |
| GACCGCTCTCTGTTTCGGTT+TGG | - | tig0023205:69875-69894 | Msa1406250:three_prime_UTR | 55.0% | |
| CGGGAGGAGCTTACTAGGTT+TGG | + | tig0023205:70037-70056 | None:intergenic | 55.0% | |
| !! | TCAATTGGTGGTGGAGGCTC+TGG | + | tig0023205:70800-70819 | None:intergenic | 55.0% |
| GAGCCTCCACCACCAATTGA+AGG | - | tig0023205:70800-70819 | Msa1406250:intron | 55.0% | |
| ACTCTAACACCAGGCCCGTT+TGG | + | tig0023205:71475-71494 | None:intergenic | 55.0% | |
| GAGTAAGCTCCCATCATGGC+AGG | - | tig0023205:71491-71510 | Msa1406250:CDS | 55.0% | |
| GTTGCTGCCATATGCCTAGG+AGG | + | tig0023205:71569-71588 | None:intergenic | 55.0% | |
| !! | AGAGCGCCGTAAACAAGCTG+TGG | - | tig0023205:73007-73026 | Msa1406250:intron | 55.0% |
| ! | AAGGCTTGGTCCTCCCTCAT+AGG | - | tig0023205:73583-73602 | Msa1406250:five_prime_UTR | 55.0% |
| !! | GAGGCTCTGGAGCAGACTCA+GGG | + | tig0023205:70787-70806 | None:intergenic | 60.0% |
| GCGCCGTAAACAAGCTGTGG+AGG | - | tig0023205:73010-73029 | Msa1406250:intron | 60.0% | |
| !! | GGAGGCTCTGGAGCAGACTC+AGG | + | tig0023205:70788-70807 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023205 | gene | 69802 | 74476 | 69802 | ID=Msa1406250;Name=Msa1406250 |
| tig0023205 | mRNA | 69802 | 74476 | 69802 | ID=Msa1406250-mRNA-1;Parent=Msa1406250;Name=Msa1406250-mRNA-1;_AED=0.07;_eAED=0.07;_QI=300|0.42|0.75|0.75|0.85|0.75|8|266|189 |
| tig0023205 | exon | 69802 | 70097 | 69802 | ID=Msa1406250-mRNA-1:exon:24512;Parent=Msa1406250-mRNA-1 |
| tig0023205 | exon | 71118 | 71202 | 71118 | ID=Msa1406250-mRNA-1:exon:24511;Parent=Msa1406250-mRNA-1 |
| tig0023205 | exon | 71236 | 71309 | 71236 | ID=Msa1406250-mRNA-1:exon:24510;Parent=Msa1406250-mRNA-1 |
| tig0023205 | exon | 71420 | 71586 | 71420 | ID=Msa1406250-mRNA-1:exon:24509;Parent=Msa1406250-mRNA-1 |
| tig0023205 | exon | 71893 | 71962 | 71893 | ID=Msa1406250-mRNA-1:exon:24508;Parent=Msa1406250-mRNA-1 |
| tig0023205 | exon | 73190 | 73198 | 73190 | ID=Msa1406250-mRNA-1:exon:24507;Parent=Msa1406250-mRNA-1 |
| tig0023205 | exon | 73425 | 73618 | 73425 | ID=Msa1406250-mRNA-1:exon:24506;Parent=Msa1406250-mRNA-1 |
| tig0023205 | exon | 74236 | 74476 | 74236 | ID=Msa1406250-mRNA-1:exon:24505;Parent=Msa1406250-mRNA-1 |
| tig0023205 | five_prime_UTR | 74236 | 74476 | 74236 | ID=Msa1406250-mRNA-1:five_prime_utr;Parent=Msa1406250-mRNA-1 |
| tig0023205 | five_prime_UTR | 73560 | 73618 | 73560 | ID=Msa1406250-mRNA-1:five_prime_utr;Parent=Msa1406250-mRNA-1 |
| tig0023205 | CDS | 73425 | 73559 | 73425 | ID=Msa1406250-mRNA-1:cds;Parent=Msa1406250-mRNA-1 |
| tig0023205 | CDS | 73190 | 73198 | 73190 | ID=Msa1406250-mRNA-1:cds;Parent=Msa1406250-mRNA-1 |
| tig0023205 | CDS | 71893 | 71962 | 71893 | ID=Msa1406250-mRNA-1:cds;Parent=Msa1406250-mRNA-1 |
| tig0023205 | CDS | 71420 | 71586 | 71420 | ID=Msa1406250-mRNA-1:cds;Parent=Msa1406250-mRNA-1 |
| tig0023205 | CDS | 71236 | 71309 | 71236 | ID=Msa1406250-mRNA-1:cds;Parent=Msa1406250-mRNA-1 |
| tig0023205 | CDS | 71118 | 71202 | 71118 | ID=Msa1406250-mRNA-1:cds;Parent=Msa1406250-mRNA-1 |
| tig0023205 | CDS | 70068 | 70097 | 70068 | ID=Msa1406250-mRNA-1:cds;Parent=Msa1406250-mRNA-1 |
| tig0023205 | three_prime_UTR | 69802 | 70067 | 69802 | ID=Msa1406250-mRNA-1:three_prime_utr;Parent=Msa1406250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
