AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1411190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1411190 MtrunA17_Chr8g0341671 95.872 218 6 1 1 215 1 218 3.70e-134 375
Msa1411190 MtrunA17_Chr7g0251181 59.124 137 24 3 1 137 1 105 1.69e-36 125
Msa1411190 MtrunA17_Chr8g0374111 56.667 120 50 2 15 132 24 143 1.84e-36 127
Msa1411190 MtrunA17_Chr2g0328021 51.145 131 57 3 15 143 57 182 8.57e-36 127
Msa1411190 MtrunA17_Chr4g0031411 61.628 86 32 1 15 100 70 154 6.57e-32 118
Msa1411190 MtrunA17_Chr8g0374251 39.062 192 93 5 17 192 65 248 2.49e-31 117
Msa1411190 MtrunA17_Chr7g0223311 75.385 65 16 0 21 85 78 142 2.31e-30 115
Msa1411190 MtrunA17_Chr2g0308011 50.000 122 47 2 20 135 37 150 3.97e-30 110
Msa1411190 MtrunA17_Chr4g0047001 65.000 80 26 1 21 98 56 135 4.23e-30 114
Msa1411190 MtrunA17_Chr4g0030051 75.000 64 16 0 8 71 29 92 5.19e-30 112
Msa1411190 MtrunA17_Chr7g0237921 60.638 94 35 2 13 104 68 161 1.35e-29 112
Msa1411190 MtrunA17_Chr4g0061761 84.906 53 8 0 18 70 38 90 2.34e-29 111
Msa1411190 MtrunA17_Chr4g0010151 52.679 112 38 3 13 111 74 183 2.84e-29 112
Msa1411190 MtrunA17_Chr8g0346551 54.545 88 40 0 17 104 21 108 6.42e-29 108
Msa1411190 MtrunA17_Chr5g0411951 75.000 56 14 0 15 70 38 93 1.29e-28 109
Msa1411190 MtrunA17_Chr8g0367161 62.821 78 25 1 20 97 32 105 1.58e-28 109
Msa1411190 MtrunA17_Chr3g0127201 71.875 64 16 2 15 77 21 83 1.06e-27 106
Msa1411190 MtrunA17_Chr1g0188851 67.164 67 19 1 8 71 28 94 1.29e-27 106
Msa1411190 MtrunA17_Chr2g0282511 87.755 49 6 0 20 68 45 93 1.76e-27 106
Msa1411190 MtrunA17_Chr3g0117601 76.786 56 13 0 15 70 56 111 5.88e-27 105
Msa1411190 MtrunA17_Chr2g0326001 68.750 64 20 0 8 71 28 91 7.58e-27 104
Msa1411190 MtrunA17_Chr3g0126201 84.000 50 8 0 22 71 53 102 1.69e-26 103
Msa1411190 MtrunA17_Chr6g0453321 60.870 69 27 0 20 88 136 204 3.00e-26 105
Msa1411190 MtrunA17_Chr4g0047761 77.358 53 12 0 18 70 70 122 6.18e-26 102
Msa1411190 MtrunA17_Chr2g0282441 78.431 51 11 0 21 71 26 76 1.47e-25 101
Msa1411190 MtrunA17_Chr2g0283811 67.857 56 18 0 17 72 44 99 1.69e-25 97.4
Msa1411190 MtrunA17_Chr1g0177251 82.000 50 9 0 22 71 14 63 1.92e-25 100
Msa1411190 MtrunA17_Chr2g0282051 67.742 62 17 1 9 67 32 93 3.30e-25 99.4
Msa1411190 MtrunA17_Chr7g0217581 62.857 70 25 1 20 89 232 300 4.10e-25 102
Msa1411190 MtrunA17_Chr7g0254161 35.519 183 95 4 20 182 101 280 5.10e-25 101
Msa1411190 MtrunA17_Chr3g0092111 57.143 77 33 0 20 96 136 212 1.26e-24 100
Msa1411190 MtrunA17_Chr5g0417601 59.211 76 27 1 9 84 133 204 2.01e-24 99.0
Msa1411190 MtrunA17_Chr6g0460731 47.561 82 43 0 20 101 96 177 4.26e-24 98.2
Msa1411190 MtrunA17_Chr8g0355261 69.231 52 16 0 20 71 118 169 4.30e-24 99.0
Msa1411190 MtrunA17_Chr5g0417571 62.500 64 23 1 8 71 127 189 4.76e-24 97.4
Msa1411190 MtrunA17_Chr4g0042481 69.231 52 16 0 20 71 122 173 1.66e-23 97.4
Msa1411190 MtrunA17_Chr6g0460721 45.977 87 47 0 20 106 89 175 4.08e-23 94.7
Msa1411190 MtrunA17_Chr5g0417551 53.409 88 35 1 20 101 127 214 6.77e-23 94.7
Msa1411190 MtrunA17_Chr5g0417561 56.471 85 29 2 20 96 119 203 2.90e-22 93.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1411190 AT1G51700.1 56.643 143 55 2 5 142 18 158 3.43e-46 152
Msa1411190 AT5G60850.1 64.368 87 27 1 16 102 47 129 9.04e-33 120
Msa1411190 AT3G50410.1 73.973 73 13 2 10 76 14 86 9.34e-33 119
Msa1411190 AT3G21270.1 52.113 142 58 4 20 151 29 170 1.06e-32 117
Msa1411190 AT5G66940.1 70.423 71 21 0 16 86 28 98 2.57e-32 117
Msa1411190 AT5G60200.1 59.302 86 33 1 15 98 50 135 1.16e-30 113
Msa1411190 AT1G07640.1 73.438 64 17 0 15 78 16 79 2.54e-30 113
Msa1411190 AT3G45610.1 68.831 77 20 3 11 85 32 106 2.94e-30 112
Msa1411190 AT1G07640.2 73.438 64 17 0 15 78 72 135 4.84e-30 114
Msa1411190 AT5G65590.1 69.014 71 21 1 16 85 37 107 6.59e-30 113
Msa1411190 AT1G07640.3 73.438 64 17 0 15 78 80 143 6.63e-30 113
Msa1411190 AT4G38000.1 58.242 91 33 1 11 101 32 117 2.34e-29 110
Msa1411190 AT2G28810.2 75.439 57 14 0 15 71 72 128 3.55e-29 111
Msa1411190 AT2G28810.1 75.439 57 14 0 15 71 89 145 4.98e-29 111
Msa1411190 AT3G52440.1 55.208 96 39 1 22 113 27 122 1.30e-28 108
Msa1411190 AT3G52440.2 55.208 96 39 1 22 113 46 141 2.20e-28 108
Msa1411190 AT1G21340.1 50.980 102 47 1 16 114 31 132 2.42e-28 107
Msa1411190 AT2G37590.1 75.862 58 13 1 14 71 84 140 4.00e-28 108
Msa1411190 AT3G61850.2 63.889 72 19 1 17 88 59 123 5.06e-28 107
Msa1411190 AT3G61850.3 63.889 72 19 1 17 88 59 123 5.06e-28 107
Msa1411190 AT3G55370.1 39.735 151 69 4 14 144 71 219 6.45e-28 107
Msa1411190 AT3G55370.3 39.610 154 71 4 11 144 113 264 6.53e-28 108
Msa1411190 AT3G61850.1 63.889 72 19 1 17 88 71 135 6.55e-28 107
Msa1411190 AT3G55370.2 39.735 151 69 4 14 144 71 219 7.75e-28 108
Msa1411190 AT3G61850.5 63.889 72 19 1 17 88 59 123 7.78e-28 107
Msa1411190 AT3G61850.4 63.889 72 19 1 17 88 71 135 9.34e-28 107
Msa1411190 AT1G28310.1 84.615 52 8 0 20 71 27 78 1.30e-27 107
Msa1411190 AT1G28310.2 84.615 52 8 0 20 71 51 102 1.89e-27 107
Msa1411190 AT2G28510.1 75.806 62 14 1 18 79 46 106 3.68e-27 105
Msa1411190 AT4G24060.1 74.138 58 14 1 15 71 47 104 1.52e-26 104
Msa1411190 AT5G62940.1 76.786 56 13 0 15 70 68 123 1.68e-26 105
Msa1411190 AT5G02460.1 71.667 60 16 1 13 71 87 146 5.63e-26 103
Msa1411190 AT4G00940.1 72.414 58 16 0 17 74 65 122 1.43e-25 101
Msa1411190 AT4G00940.3 72.414 58 16 0 17 74 65 122 1.43e-25 101
Msa1411190 AT4G00940.2 72.414 58 16 0 17 74 65 122 1.43e-25 101
Msa1411190 AT1G47655.1 61.765 68 23 1 5 69 11 78 1.78e-25 99.0
Msa1411190 AT2G46590.1 76.471 51 12 0 17 67 65 115 2.05e-25 102
Msa1411190 AT2G46590.2 76.471 51 12 0 17 67 77 127 2.43e-25 102
Msa1411190 AT1G64620.1 75.000 56 13 1 15 69 43 98 3.45e-25 101
Msa1411190 AT4G21050.1 80.000 50 10 0 22 71 26 75 3.63e-25 98.2
Msa1411190 AT1G29160.1 73.077 52 14 0 20 71 62 113 3.67e-25 97.4
Msa1411190 AT2G34140.1 73.077 52 14 0 20 71 58 109 3.79e-25 97.1
Msa1411190 AT1G69570.1 73.077 52 14 0 20 71 132 183 6.21e-25 101
Msa1411190 AT3G47500.1 61.644 73 27 1 20 92 110 181 8.62e-25 101
Msa1411190 AT5G39660.3 59.420 69 28 0 20 88 138 206 9.32e-24 98.6
Msa1411190 AT5G39660.1 59.420 69 28 0 20 88 138 206 9.32e-24 98.6
Msa1411190 AT5G39660.2 59.420 69 28 0 20 88 138 206 9.32e-24 98.6
Msa1411190 AT1G26790.1 69.231 52 16 0 20 71 111 162 2.20e-23 96.7
Msa1411190 AT5G62430.1 69.231 52 16 0 20 71 54 105 5.64e-23 94.4
Msa1411190 AT4G21040.1 68.519 54 17 0 22 75 27 80 7.29e-23 92.8
Msa1411190 AT4G21080.1 70.370 54 16 0 22 75 27 80 2.11e-22 92.0
Msa1411190 AT4G21030.1 62.000 50 19 0 22 71 23 72 3.51e-14 68.6

Find 56 sgRNAs with CRISPR-Local

Find 63 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGACTAAAGGTGGCGCTTTA+AGG 0.181398 tig0023724:+46571 Msa1411190:CDS
TGTTCTTGTTCTGGAAAATT+TGG 0.207790 tig0023724:-46444 None:intergenic
AAATGGGTCGGGTTTGAAAA+TGG 0.208231 tig0023724:+46851 Msa1411190:CDS
ATCTTTCTTGGTTTGCAAAA+TGG 0.257606 tig0023724:+46960 Msa1411190:CDS
CTTGCATCAACTGAGCGATT+TGG 0.269361 tig0023724:+46804 Msa1411190:CDS
TTCTGGAAAATTTGGTTTCA+TGG 0.271012 tig0023724:-46436 None:intergenic
CATTTGAGTTGTTCTTGTTC+TGG 0.291270 tig0023724:-46453 None:intergenic
CCCGGTTGTGAATACGGATT+TGG 0.293449 tig0023724:+46902 Msa1411190:CDS
GGGGAATCAGAGATCTTTCT+TGG 0.299700 tig0023724:+46948 Msa1411190:CDS
CACCCGGGTCAACATGAATC+TGG 0.303329 tig0023724:-46746 None:intergenic
TTGCATCAACTGAGCGATTT+GGG 0.303955 tig0023724:+46805 Msa1411190:CDS
GACCCGGGTGAGAGGAATTT+TGG 0.316050 tig0023724:+46759 Msa1411190:CDS
TTGAATTCAGACCTTCAAAA+AGG 0.316361 tig0023724:-46830 None:intergenic
GGTTTGAAAATGGGTGAATT+TGG 0.336305 tig0023724:+46861 Msa1411190:CDS
CATAACCCGGGTGGTAGAAA+TGG 0.353048 tig0023724:+46927 Msa1411190:CDS
TTTGAAGGTCTGAATTCAAA+TGG 0.368494 tig0023724:+46834 Msa1411190:CDS
TCATGGGTTGAAATGTTGTT+TGG 0.390520 tig0023724:-46419 None:intergenic
CCCAAATCCGTATTCACAAC+CGG 0.400363 tig0023724:-46903 None:intergenic
ATAACCCGGGTGGTAGAAAT+GGG 0.416940 tig0023724:+46928 Msa1411190:CDS
AATGGGTCGGGTTTGAAAAT+GGG 0.442550 tig0023724:+46852 Msa1411190:CDS
CTGTGACCCGGTTGTGAATA+CGG 0.450073 tig0023724:+46896 Msa1411190:CDS
AAAATGGTGGTTCAAATTGT+TGG 0.451811 tig0023724:+46976 Msa1411190:CDS
TTTCTTGTTCCACCACCAAC+TGG 0.453104 tig0023724:-46600 None:intergenic
CCGGTTGTGAATACGGATTT+GGG 0.453312 tig0023724:+46903 Msa1411190:CDS
TGCAAAAGATATTGGACTAA+AGG 0.473852 tig0023724:+46558 Msa1411190:CDS
CCACCAAAATTCCTCTCACC+CGG 0.474564 tig0023724:-46762 None:intergenic
TCTGGAAAATTTGGTTTCAT+GGG 0.485487 tig0023724:-46435 None:intergenic
TACGGATTTGGGTCATAACC+CGG 0.489454 tig0023724:+46914 Msa1411190:CDS
TTGAAGGTCTGAATTCAAAT+GGG 0.494568 tig0023724:+46835 Msa1411190:CDS
GGTCTGAATTCAAATGGGTC+GGG 0.510843 tig0023724:+46840 Msa1411190:CDS
TTTCTTGGTTTGCAAAATGG+TGG 0.514745 tig0023724:+46963 Msa1411190:CDS
AATTGTTGGAATGATAATCA+TGG 0.521992 tig0023724:+46990 Msa1411190:CDS
AGGTCTGAATTCAAATGGGT+CGG 0.529995 tig0023724:+46839 Msa1411190:CDS
GACCCAGATTCATGTTGACC+CGG 0.541258 tig0023724:+46743 Msa1411190:CDS
GGTCAACATGAATCTGGGTC+GGG 0.542667 tig0023724:-46740 None:intergenic
GATTCCCCATTTCTACCACC+CGG 0.543789 tig0023724:-46933 None:intergenic
ACCCGGGTCAACATGAATCT+GGG 0.549644 tig0023724:-46745 None:intergenic
TTCATGTTGACCCGGGTGAG+AGG 0.558997 tig0023724:+46751 Msa1411190:CDS
AGGAACATACCAGTTGGTGG+TGG 0.578156 tig0023724:+46591 Msa1411190:CDS
ATCTACTGATAAGTTGAGCT+AGG 0.579652 tig0023724:-47038 None:intergenic
TGAGAATTTGAACTGTGACC+CGG 0.580599 tig0023724:+46884 Msa1411190:CDS
GGGTCAACATGAATCTGGGT+CGG 0.590125 tig0023724:-46741 None:intergenic
CCAAATCCGTATTCACAACC+GGG 0.603508 tig0023724:-46902 None:intergenic
TTAAGGAACATACCAGTTGG+TGG 0.605626 tig0023724:+46588 Msa1411190:CDS
AAAAGATATTGGACTAAAGG+TGG 0.610002 tig0023724:+46561 Msa1411190:CDS
GAACTGGTTGTTGATGCTGA+TGG 0.611011 tig0023724:-46678 None:intergenic
GCTTTAAGGAACATACCAGT+TGG 0.613785 tig0023724:+46585 Msa1411190:CDS
GTTGGAATGATAATCATGGT+TGG 0.627491 tig0023724:+46994 Msa1411190:CDS
ACGGATTTGGGTCATAACCC+GGG 0.629532 tig0023724:+46915 Msa1411190:CDS
CACCAAAATTCCTCTCACCC+GGG 0.635635 tig0023724:-46761 None:intergenic
ACCCAGATTCATGTTGACCC+GGG 0.637927 tig0023724:+46744 Msa1411190:CDS
ATTCCCCATTTCTACCACCC+GGG 0.643173 tig0023724:-46932 None:intergenic
GCTGATGGAGAAGATGAAGA+TGG 0.658893 tig0023724:-46663 None:intergenic
TAACCCGGGTGGTAGAAATG+GGG 0.710853 tig0023724:+46929 Msa1411190:CDS
GTGTTGCTTGATTCACAACG+TGG 0.731087 tig0023724:-46477 None:intergenic
GATTTGGGTCATAACCCGGG+TGG 0.768929 tig0023724:+46918 Msa1411190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTTGCAGTTTTTGCAAAAA+TGG - tig0023724:46545-46564 None:intergenic 25.0%
! AATTGTTGGAATGATAATCA+TGG + tig0023724:46990-47009 Msa1411190:CDS 25.0%
! TCTGGAAAATTTGGTTTCAT+GGG - tig0023724:46438-46457 None:intergenic 30.0%
! TTCTGGAAAATTTGGTTTCA+TGG - tig0023724:46439-46458 None:intergenic 30.0%
!! TGTTCTTGTTCTGGAAAATT+TGG - tig0023724:46447-46466 None:intergenic 30.0%
GCAAAAACTGCAAAAGATAT+TGG + tig0023724:46550-46569 Msa1411190:CDS 30.0%
TGCAAAAGATATTGGACTAA+AGG + tig0023724:46558-46577 Msa1411190:CDS 30.0%
AAAAGATATTGGACTAAAGG+TGG + tig0023724:46561-46580 Msa1411190:CDS 30.0%
TTGAATTCAGACCTTCAAAA+AGG - tig0023724:46833-46852 None:intergenic 30.0%
TTTGAAGGTCTGAATTCAAA+TGG + tig0023724:46834-46853 Msa1411190:CDS 30.0%
TTGAAGGTCTGAATTCAAAT+GGG + tig0023724:46835-46854 Msa1411190:CDS 30.0%
!! ATCTTTCTTGGTTTGCAAAA+TGG + tig0023724:46960-46979 Msa1411190:CDS 30.0%
AAAATGGTGGTTCAAATTGT+TGG + tig0023724:46976-46995 Msa1411190:CDS 30.0%
! TCATGGGTTGAAATGTTGTT+TGG - tig0023724:46422-46441 None:intergenic 35.0%
!! CATTTGAGTTGTTCTTGTTC+TGG - tig0023724:46456-46475 None:intergenic 35.0%
GGTTTGAAAATGGGTGAATT+TGG + tig0023724:46861-46880 Msa1411190:CDS 35.0%
!! TTTCTTGGTTTGCAAAATGG+TGG + tig0023724:46963-46982 Msa1411190:CDS 35.0%
GTTGGAATGATAATCATGGT+TGG + tig0023724:46994-47013 Msa1411190:CDS 35.0%
! CAGTTTTTGCAAAAATGGCG+TGG - tig0023724:46540-46559 None:intergenic 40.0%
!! GCTTTAAGGAACATACCAGT+TGG + tig0023724:46585-46604 Msa1411190:CDS 40.0%
TTAAGGAACATACCAGTTGG+TGG + tig0023724:46588-46607 Msa1411190:CDS 40.0%
! AACTTTTGCTGCTGAAGAAC+TGG - tig0023724:46697-46716 None:intergenic 40.0%
TTGCATCAACTGAGCGATTT+GGG + tig0023724:46805-46824 Msa1411190:CDS 40.0%
!! CGATTTGGGAACCTTTTTGA+AGG + tig0023724:46819-46838 Msa1411190:CDS 40.0%
AGGTCTGAATTCAAATGGGT+CGG + tig0023724:46839-46858 Msa1411190:CDS 40.0%
AAATGGGTCGGGTTTGAAAA+TGG + tig0023724:46851-46870 Msa1411190:CDS 40.0%
AATGGGTCGGGTTTGAAAAT+GGG + tig0023724:46852-46871 Msa1411190:CDS 40.0%
TGAGAATTTGAACTGTGACC+CGG + tig0023724:46884-46903 Msa1411190:CDS 40.0%
!! GTGTTGCTTGATTCACAACG+TGG - tig0023724:46480-46499 None:intergenic 45.0%
TTTCTTGTTCCACCACCAAC+TGG - tig0023724:46603-46622 None:intergenic 45.0%
GCTGATGGAGAAGATGAAGA+TGG - tig0023724:46666-46685 None:intergenic 45.0%
GAACTGGTTGTTGATGCTGA+TGG - tig0023724:46681-46700 None:intergenic 45.0%
!! GTGAGAGGAATTTTGGTGGA+GGG + tig0023724:46766-46785 Msa1411190:CDS 45.0%
CTTGCATCAACTGAGCGATT+TGG + tig0023724:46804-46823 Msa1411190:CDS 45.0%
GGTCTGAATTCAAATGGGTC+GGG + tig0023724:46840-46859 Msa1411190:CDS 45.0%
CCAAATCCGTATTCACAACC+GGG - tig0023724:46905-46924 None:intergenic 45.0%
CCCAAATCCGTATTCACAAC+CGG - tig0023724:46906-46925 None:intergenic 45.0%
CCGGTTGTGAATACGGATTT+GGG + tig0023724:46903-46922 Msa1411190:CDS 45.0%
TACGGATTTGGGTCATAACC+CGG + tig0023724:46914-46933 Msa1411190:CDS 45.0%
ATAACCCGGGTGGTAGAAAT+GGG + tig0023724:46928-46947 Msa1411190:CDS 45.0%
GGGGAATCAGAGATCTTTCT+TGG + tig0023724:46948-46967 Msa1411190:CDS 45.0%
GGACTAAAGGTGGCGCTTTA+AGG + tig0023724:46571-46590 Msa1411190:CDS 50.0%
!! AGGAACATACCAGTTGGTGG+TGG + tig0023724:46591-46610 Msa1411190:CDS 50.0%
GGTCAACATGAATCTGGGTC+GGG - tig0023724:46743-46762 None:intergenic 50.0%
GGGTCAACATGAATCTGGGT+CGG - tig0023724:46744-46763 None:intergenic 50.0%
GACCCAGATTCATGTTGACC+CGG + tig0023724:46743-46762 Msa1411190:CDS 50.0%
ACCCAGATTCATGTTGACCC+GGG + tig0023724:46744-46763 Msa1411190:CDS 50.0%
ACCCGGGTCAACATGAATCT+GGG - tig0023724:46748-46767 None:intergenic 50.0%
CACCAAAATTCCTCTCACCC+GGG - tig0023724:46764-46783 None:intergenic 50.0%
CCACCAAAATTCCTCTCACC+CGG - tig0023724:46765-46784 None:intergenic 50.0%
!! GGTGAGAGGAATTTTGGTGG+AGG + tig0023724:46765-46784 Msa1411190:CDS 50.0%
CTGTGACCCGGTTGTGAATA+CGG + tig0023724:46896-46915 Msa1411190:CDS 50.0%
CCCGGTTGTGAATACGGATT+TGG + tig0023724:46902-46921 Msa1411190:CDS 50.0%
ACGGATTTGGGTCATAACCC+GGG + tig0023724:46915-46934 Msa1411190:CDS 50.0%
CATAACCCGGGTGGTAGAAA+TGG + tig0023724:46927-46946 Msa1411190:CDS 50.0%
TAACCCGGGTGGTAGAAATG+GGG + tig0023724:46929-46948 Msa1411190:CDS 50.0%
ATTCCCCATTTCTACCACCC+GGG - tig0023724:46935-46954 None:intergenic 50.0%
GATTCCCCATTTCTACCACC+CGG - tig0023724:46936-46955 None:intergenic 50.0%
CACCCGGGTCAACATGAATC+TGG - tig0023724:46749-46768 None:intergenic 55.0%
TTCATGTTGACCCGGGTGAG+AGG + tig0023724:46751-46770 Msa1411190:CDS 55.0%
! GACCCGGGTGAGAGGAATTT+TGG + tig0023724:46759-46778 Msa1411190:CDS 55.0%
! CCGGGTGAGAGGAATTTTGG+TGG + tig0023724:46762-46781 Msa1411190:CDS 55.0%
GATTTGGGTCATAACCCGGG+TGG + tig0023724:46918-46937 Msa1411190:CDS 55.0%
Chromosome Type Strat End Strand Name
tig0023724 gene 46411 47058 46411 ID=Msa1411190;Name=Msa1411190
tig0023724 mRNA 46411 47058 46411 ID=Msa1411190-mRNA-1;Parent=Msa1411190;Name=Msa1411190-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|215
tig0023724 exon 46411 47058 46411 ID=Msa1411190-mRNA-1:exon:19932;Parent=Msa1411190-mRNA-1
tig0023724 CDS 46411 47058 46411 ID=Msa1411190-mRNA-1:cds;Parent=Msa1411190-mRNA-1
Gene Sequence

>Msa1411190

ATGCAAAACCAAACAACATTTCAACCCATGAAACCAAATTTTCCAGAACAAGAACAACTCAAATGTCCACGTTGTGAATCAAGCAACACAAAATTCTGCTACTACAACAACTACAATCTCTCACAACCACGCCATTTTTGCAAAAACTGCAAAAGATATTGGACTAAAGGTGGCGCTTTAAGGAACATACCAGTTGGTGGTGGAACAAGAAAAGTTACAAAACGTTCATCAAATTCTAAACGTTCAACAACACCATCTTCATCTTCTCCATCAGCATCAACAACCAGTTCTTCAGCAGCAAAAGTTTCAGCTTCAGTTTCAGAAACTGACCCGACCCAGATTCATGTTGACCCGGGTGAGAGGAATTTTGGTGGAGGGAGTTTTAGTTCACTTCTTGCATCAACTGAGCGATTTGGGAACCTTTTTGAAGGTCTGAATTCAAATGGGTCGGGTTTGAAAATGGGTGAATTTGGTGAGAATTTGAACTGTGACCCGGTTGTGAATACGGATTTGGGTCATAACCCGGGTGGTAGAAATGGGGAATCAGAGATCTTTCTTGGTTTGCAAAATGGTGGTTCAAATTGTTGGAATGATAATCATGGTTGGTCTGATCTTGCTATATACACTCCTAGCTCAACTTATCAGTAG
Protein sequence

>Msa1411190

MQNQTTFQPMKPNFPEQEQLKCPRCESSNTKFCYYNNYNLSQPRHFCKNCKRYWTKGGALRNIPVGGGTRKVTKRSSNSKRSTTPSSSSPSASTTSSSAAKVSASVSETDPTQIHVDPGERNFGGGSFSSLLASTERFGNLFEGLNSNGSGLKMGEFGENLNCDPVVNTDLGHNPGGRNGESEIFLGLQNGGSNCWNDNHGWSDLAIYTPSSTYQ*