Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1413850 | sp|F4IXE7|IDM1_ARATH | 30.966 | 507 | 279 | 16 | 51 | 536 | 567 | 1023 | 1.06e-57 | 211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1413850 | A0A396J566 | 80.147 | 544 | 36 | 4 | 1 | 544 | 1 | 472 | 0.0 | 766 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1413850 | TR | PHD |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1413850 | MtrunA17_Chr3g0134851 | 80.147 | 544 | 36 | 4 | 1 | 544 | 1 | 472 | 0.0 | 766 |
| Msa1413850 | MtrunA17_Chr7g0270101 | 51.322 | 643 | 177 | 13 | 4 | 537 | 173 | 788 | 0.0 | 557 |
| Msa1413850 | MtrunA17_Chr3g0134821 | 57.496 | 567 | 185 | 10 | 4 | 538 | 292 | 834 | 0.0 | 549 |
| Msa1413850 | MtrunA17_Chr3g0134811 | 48.974 | 682 | 183 | 12 | 3 | 538 | 131 | 793 | 0.0 | 543 |
| Msa1413850 | MtrunA17_Chr5g0407211 | 57.175 | 439 | 156 | 9 | 109 | 536 | 2 | 419 | 1.69e-164 | 474 |
| Msa1413850 | MtrunA17_Chr5g0407251 | 56.492 | 439 | 159 | 9 | 109 | 536 | 2 | 419 | 7.11e-162 | 467 |
| Msa1413850 | MtrunA17_Chr5g0430361 | 37.002 | 527 | 261 | 15 | 30 | 538 | 586 | 1059 | 7.42e-92 | 303 |
| Msa1413850 | MtrunA17_Chr3g0105291 | 36.832 | 505 | 269 | 12 | 46 | 536 | 540 | 1008 | 1.27e-86 | 290 |
| Msa1413850 | MtrunA17_Chr2g0316251 | 34.234 | 444 | 244 | 10 | 106 | 536 | 758 | 1166 | 3.73e-68 | 239 |
| Msa1413850 | MtrunA17_Chr1g0205451 | 33.976 | 415 | 234 | 7 | 106 | 510 | 602 | 986 | 2.74e-61 | 219 |
| Msa1413850 | MtrunA17_Chr1g0185491 | 32.360 | 445 | 269 | 12 | 106 | 543 | 808 | 1227 | 5.70e-61 | 218 |
| Msa1413850 | MtrunA17_Chr1g0182481 | 26.667 | 435 | 218 | 14 | 144 | 524 | 496 | 883 | 2.16e-39 | 153 |
| Msa1413850 | MtrunA17_Chr7g0259981 | 30.100 | 299 | 169 | 8 | 223 | 517 | 13 | 275 | 2.81e-34 | 131 |
| Msa1413850 | MtrunA17_Chr1g0179841 | 25.495 | 455 | 229 | 15 | 144 | 531 | 386 | 797 | 9.39e-32 | 130 |
| Msa1413850 | MtrunA17_Chr7g0265211 | 25.373 | 469 | 230 | 17 | 136 | 534 | 527 | 945 | 2.74e-30 | 126 |
| Msa1413850 | MtrunA17_Chr4g0028111 | 23.515 | 421 | 207 | 11 | 157 | 509 | 187 | 560 | 4.73e-21 | 97.1 |
| Msa1413850 | MtrunA17_Chr4g0055731 | 24.500 | 400 | 221 | 13 | 138 | 530 | 138 | 463 | 5.97e-21 | 95.9 |
| Msa1413850 | MtrunA17_Chr4g0027811 | 23.276 | 464 | 223 | 14 | 108 | 521 | 182 | 562 | 8.49e-21 | 96.3 |
| Msa1413850 | MtrunA17_Chr4g0025251 | 26.482 | 253 | 140 | 8 | 295 | 520 | 453 | 686 | 7.45e-19 | 90.5 |
| Msa1413850 | MtrunA17_Chr2g0320451 | 25.000 | 192 | 135 | 4 | 348 | 536 | 838 | 1023 | 3.43e-15 | 79.0 |
| Msa1413850 | MtrunA17_Chr2g0320451 | 30.093 | 216 | 107 | 7 | 62 | 269 | 421 | 600 | 1.47e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1413850 | AT5G58610.4 | 35.729 | 501 | 266 | 11 | 67 | 542 | 314 | 783 | 1.03e-83 | 278 |
| Msa1413850 | AT5G58610.8 | 35.729 | 501 | 266 | 11 | 67 | 542 | 545 | 1014 | 1.90e-82 | 277 |
| Msa1413850 | AT5G58610.2 | 35.729 | 501 | 266 | 11 | 67 | 542 | 545 | 1014 | 1.90e-82 | 277 |
| Msa1413850 | AT5G58610.3 | 35.729 | 501 | 266 | 11 | 67 | 542 | 545 | 1014 | 2.73e-82 | 278 |
| Msa1413850 | AT5G58610.7 | 35.729 | 501 | 266 | 11 | 67 | 542 | 536 | 1005 | 3.54e-82 | 278 |
| Msa1413850 | AT5G58610.5 | 35.729 | 501 | 266 | 11 | 67 | 542 | 536 | 1005 | 3.80e-82 | 277 |
| Msa1413850 | AT5G58610.1 | 34.608 | 497 | 251 | 12 | 67 | 542 | 536 | 979 | 5.72e-75 | 257 |
| Msa1413850 | AT5G58610.6 | 34.608 | 497 | 251 | 12 | 67 | 542 | 536 | 979 | 8.76e-75 | 256 |
| Msa1413850 | AT5G58610.10 | 34.932 | 438 | 229 | 11 | 67 | 479 | 545 | 951 | 2.14e-66 | 232 |
| Msa1413850 | AT5G58610.9 | 34.932 | 438 | 229 | 11 | 67 | 479 | 536 | 942 | 2.36e-66 | 232 |
| Msa1413850 | AT5G36740.5 | 32.644 | 435 | 257 | 9 | 118 | 542 | 547 | 955 | 4.28e-65 | 230 |
| Msa1413850 | AT5G36740.1 | 32.644 | 435 | 257 | 9 | 118 | 542 | 547 | 955 | 4.28e-65 | 230 |
| Msa1413850 | AT5G36740.4 | 32.054 | 443 | 259 | 10 | 118 | 542 | 394 | 812 | 7.61e-62 | 220 |
| Msa1413850 | AT1G05380.3 | 32.273 | 440 | 265 | 9 | 106 | 539 | 516 | 928 | 7.72e-59 | 212 |
| Msa1413850 | AT1G05380.1 | 32.273 | 440 | 265 | 9 | 106 | 539 | 516 | 928 | 7.72e-59 | 212 |
| Msa1413850 | AT1G05380.2 | 32.273 | 440 | 265 | 9 | 106 | 539 | 516 | 928 | 7.72e-59 | 212 |
| Msa1413850 | AT3G14980.6 | 30.966 | 507 | 279 | 16 | 51 | 536 | 567 | 1023 | 1.08e-58 | 211 |
| Msa1413850 | AT3G14980.1 | 30.966 | 507 | 279 | 16 | 51 | 536 | 567 | 1023 | 1.08e-58 | 211 |
| Msa1413850 | AT3G14980.2 | 30.966 | 507 | 279 | 16 | 51 | 536 | 567 | 1023 | 1.08e-58 | 211 |
| Msa1413850 | AT3G14980.5 | 31.041 | 509 | 276 | 17 | 51 | 536 | 522 | 978 | 1.12e-58 | 211 |
| Msa1413850 | AT3G14980.3 | 30.966 | 507 | 279 | 16 | 51 | 536 | 567 | 1023 | 1.31e-58 | 211 |
| Msa1413850 | AT5G36670.4 | 28.647 | 569 | 339 | 15 | 6 | 542 | 436 | 969 | 5.95e-57 | 206 |
| Msa1413850 | AT5G36670.5 | 28.647 | 569 | 339 | 15 | 6 | 542 | 436 | 969 | 5.95e-57 | 206 |
| Msa1413850 | AT5G36670.2 | 30.675 | 489 | 290 | 13 | 6 | 478 | 436 | 891 | 5.99e-56 | 202 |
| Msa1413850 | AT5G36740.2 | 30.675 | 489 | 290 | 13 | 6 | 478 | 436 | 891 | 5.99e-56 | 202 |
| Msa1413850 | AT5G36740.3 | 30.675 | 489 | 290 | 13 | 6 | 478 | 436 | 891 | 5.99e-56 | 202 |
| Msa1413850 | AT5G58610.11 | 33.827 | 405 | 212 | 11 | 67 | 446 | 536 | 909 | 4.53e-54 | 197 |
| Msa1413850 | AT5G63900.1 | 36.562 | 320 | 169 | 9 | 223 | 539 | 255 | 543 | 5.69e-54 | 192 |
| Msa1413850 | AT5G36670.3 | 28.250 | 577 | 341 | 16 | 6 | 542 | 283 | 826 | 6.53e-54 | 197 |
| Msa1413850 | AT4G14920.2 | 28.492 | 537 | 304 | 17 | 14 | 536 | 513 | 983 | 8.37e-54 | 197 |
| Msa1413850 | AT4G14920.1 | 28.492 | 537 | 304 | 17 | 14 | 536 | 513 | 983 | 8.37e-54 | 197 |
| Msa1413850 | AT4G14920.3 | 28.492 | 537 | 304 | 17 | 14 | 536 | 513 | 983 | 8.70e-54 | 197 |
| Msa1413850 | AT5G36670.1 | 28.250 | 577 | 341 | 16 | 6 | 542 | 436 | 979 | 1.58e-53 | 196 |
| Msa1413850 | AT2G37520.1 | 27.483 | 433 | 227 | 14 | 144 | 525 | 410 | 806 | 3.45e-38 | 150 |
| Msa1413850 | AT3G53680.1 | 27.842 | 431 | 227 | 14 | 144 | 525 | 427 | 822 | 1.05e-37 | 149 |
| Msa1413850 | AT3G53680.2 | 27.842 | 431 | 227 | 14 | 144 | 525 | 429 | 824 | 1.22e-37 | 148 |
| Msa1413850 | AT3G14980.4 | 29.904 | 418 | 222 | 16 | 51 | 447 | 567 | 934 | 2.52e-37 | 147 |
| Msa1413850 | AT2G36720.1 | 24.138 | 464 | 244 | 11 | 144 | 541 | 557 | 978 | 4.39e-35 | 141 |
| Msa1413850 | AT2G36720.2 | 24.138 | 464 | 244 | 11 | 144 | 541 | 557 | 978 | 4.39e-35 | 141 |
| Msa1413850 | AT2G27980.1 | 25.957 | 470 | 236 | 13 | 144 | 543 | 637 | 1064 | 7.20e-31 | 128 |
Find 99 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATACTTTCTTTGAATTTC+AGG | 0.141944 | tig0024068:-70360 | Msa1413850:CDS |
| ACATGTTCTGTTTGTTGTTT+TGG | 0.157762 | tig0024068:-71244 | Msa1413850:CDS |
| AGATCATTCCCAAGCTTATT+TGG | 0.196412 | tig0024068:+70872 | None:intergenic |
| GTGGCAACCATAAGGATTTA+TGG | 0.239122 | tig0024068:-70596 | Msa1413850:CDS |
| TGGTTTCTATACTGCGATTA+TGG | 0.240807 | tig0024068:-70642 | Msa1413850:CDS |
| TGCAAATTCTTGTTTGCGTT+TGG | 0.242204 | tig0024068:+71090 | None:intergenic |
| ACCATCCAAAAGTATCTTCT+TGG | 0.296021 | tig0024068:-71413 | Msa1413850:CDS |
| GTTGATAAAGGATGGAGTTT+TGG | 0.297915 | tig0024068:-71581 | Msa1413850:CDS |
| GTCTTCCAAGAAGATACTTT+TGG | 0.305890 | tig0024068:+71408 | None:intergenic |
| ACAAGCATGAGCCTCAAATT+TGG | 0.327395 | tig0024068:+71450 | None:intergenic |
| TCGTTCCACTCTGATTGTTT+AGG | 0.327474 | tig0024068:-71187 | Msa1413850:CDS |
| CTAAAGAGGGAAGGTATAAG+AGG | 0.337184 | tig0024068:-71616 | Msa1413850:CDS |
| ACAAGAGATACTCCCTCTTT+TGG | 0.339052 | tig0024068:+71516 | None:intergenic |
| CGGAACTTCATTGTTGGACT+TGG | 0.361651 | tig0024068:-71386 | Msa1413850:CDS |
| GTTTCTAAAGCCTCTAGTTC+CGG | 0.368804 | tig0024068:-71763 | Msa1413850:CDS |
| GCAAATTCTTGTTTGCGTTT+GGG | 0.380503 | tig0024068:+71091 | None:intergenic |
| CAGACCATCCGGATCTCGTT+TGG | 0.386226 | tig0024068:+71162 | None:intergenic |
| CCAAGTGTCTATAGCATCCT+TGG | 0.387385 | tig0024068:+70439 | None:intergenic |
| GGAACGGATAAATCAACTTC+TGG | 0.396861 | tig0024068:-71790 | Msa1413850:CDS |
| ACATGTTCCCACAAACTTCA+TGG | 0.397494 | tig0024068:+70924 | None:intergenic |
| ATTCACTCTCACCAAATTTG+AGG | 0.418669 | tig0024068:-71461 | Msa1413850:CDS |
| TGTGTAAAGGCAACAAGAAT+TGG | 0.422575 | tig0024068:-71007 | Msa1413850:CDS |
| CATAAGGATTTATGGTCAAA+AGG | 0.428606 | tig0024068:-70588 | Msa1413850:CDS |
| CAAACGAGATCCGGATGGTC+TGG | 0.433972 | tig0024068:-71161 | Msa1413850:CDS |
| AAGAAACGTTTGAACTTTCG+TGG | 0.439001 | tig0024068:-70662 | Msa1413850:CDS |
| AGTTGATTAACTTAGGAGTT+GGG | 0.439665 | tig0024068:-70481 | Msa1413850:CDS |
| GAGACACTTTCTTTGTTAAG+TGG | 0.443344 | tig0024068:+70317 | None:intergenic |
| AGACCATCCGGATCTCGTTT+GGG | 0.445042 | tig0024068:+71163 | None:intergenic |
| TTGTAATGCTGAAGCAAAAT+CGG | 0.448060 | tig0024068:-71317 | Msa1413850:CDS |
| TTTAGGTCCCAAACGAGATC+CGG | 0.450042 | tig0024068:-71170 | Msa1413850:CDS |
| ATGTGACTAGAAACTTCATT+TGG | 0.453838 | tig0024068:+70980 | None:intergenic |
| GGAAGACGGAACTTCATTGT+TGG | 0.455884 | tig0024068:-71392 | Msa1413850:CDS |
| TCTGAGCTCAGCCAATCAAA+AGG | 0.457877 | tig0024068:-71347 | Msa1413850:CDS |
| ATTGACAATGTTACCAAAAG+AGG | 0.459673 | tig0024068:-71529 | Msa1413850:CDS |
| GAAGTGTTCTCAGTTGATAA+AGG | 0.461389 | tig0024068:-71593 | Msa1413850:CDS |
| CGTAAATTGACTGTGGCTCT+TGG | 0.463118 | tig0024068:-70773 | Msa1413850:CDS |
| GAGGAACAGTTGATTAACTT+AGG | 0.464976 | tig0024068:-70488 | Msa1413850:CDS |
| GGTGTGCTGCGTGAGAGTTT+TGG | 0.469338 | tig0024068:-70752 | Msa1413850:CDS |
| TGTTGTTGTTGTTCCTTCCT+CGG | 0.473116 | tig0024068:+71873 | None:intergenic |
| CTGAGCTCAGCCAATCAAAA+GGG | 0.474959 | tig0024068:-71346 | Msa1413850:CDS |
| CTAGGAATACCAAATAAGCT+TGG | 0.478097 | tig0024068:-70881 | Msa1413850:CDS |
| TATACTGCGATTATGGAGAA+AGG | 0.478537 | tig0024068:-70635 | Msa1413850:CDS |
| CCGTTCCCTCAGATTCTCTC+AGG | 0.480436 | tig0024068:+71806 | None:intergenic |
| TAGGAATACCAAATAAGCTT+GGG | 0.480908 | tig0024068:-70880 | Msa1413850:CDS |
| ATACTGCGATTATGGAGAAA+GGG | 0.484197 | tig0024068:-70634 | Msa1413850:CDS |
| ATTTCACTTGGGGTGTGTAA+AGG | 0.484386 | tig0024068:-71020 | Msa1413850:CDS |
| CAGTTGATTAACTTAGGAGT+TGG | 0.492298 | tig0024068:-70482 | Msa1413850:CDS |
| TATAATGTGAGTTGTGATGA+TGG | 0.496882 | tig0024068:-70830 | Msa1413850:CDS |
| AGCTCAGAGCTTTCATTCGA+CGG | 0.500191 | tig0024068:+71362 | None:intergenic |
| TAACTTAGGAGTTGGGAGCT+TGG | 0.501005 | tig0024068:-70474 | Msa1413850:CDS |
| AGCTTGGGAATGATCTAACT+TGG | 0.501787 | tig0024068:-70865 | Msa1413850:CDS |
| GGATAAATCAACTTCTGGTA+AGG | 0.504650 | tig0024068:-71785 | Msa1413850:CDS |
| AAAGAGGGAAAGTACTAAAG+AGG | 0.506275 | tig0024068:-71630 | Msa1413850:CDS |
| TGAGTTCTGTGGCAACCATA+AGG | 0.512428 | tig0024068:-70604 | Msa1413850:CDS |
| CGGATGGTCTGGATGGTACA+TGG | 0.516273 | tig0024068:-71150 | Msa1413850:CDS |
| AAGAGGGAAAGTACTAAAGA+GGG | 0.517147 | tig0024068:-71629 | Msa1413850:CDS |
| AATGTGCCGTTTGTTGATGA+AGG | 0.520351 | tig0024068:-70516 | Msa1413850:CDS |
| GTTTCTAATTCAGTGGGTAG+TGG | 0.524886 | tig0024068:-71655 | Msa1413850:CDS |
| CCAAGGATGCTATAGACACT+TGG | 0.526403 | tig0024068:-70439 | Msa1413850:CDS |
| TAAAGAGGGAAGGTATAAGA+GGG | 0.542556 | tig0024068:-71615 | Msa1413850:CDS |
| CATGTACCATCCAGACCATC+CGG | 0.542947 | tig0024068:+71151 | None:intergenic |
| CAATCAGAGTGGAACGAAGA+AGG | 0.546313 | tig0024068:+71193 | None:intergenic |
| ATCAGAAGTTTCTAATTCAG+TGG | 0.547714 | tig0024068:-71662 | Msa1413850:CDS |
| TCAGTGGGTAGTGGTAAAAG+AGG | 0.549198 | tig0024068:-71646 | Msa1413850:CDS |
| ATGTGAACGAAAATTTCACT+TGG | 0.549257 | tig0024068:-71032 | Msa1413850:CDS |
| TGTTCTCAGTTGATAAAGGA+TGG | 0.550925 | tig0024068:-71589 | Msa1413850:CDS |
| CGAGATCCGGATGGTCTGGA+TGG | 0.554408 | tig0024068:-71157 | Msa1413850:CDS |
| CAGTGGGTAGTGGTAAAAGA+GGG | 0.562756 | tig0024068:-71645 | Msa1413850:CDS |
| CAAGCCCCTTCATCAACAAA+CGG | 0.563396 | tig0024068:+70510 | None:intergenic |
| AAAAGTATCTTCTTGGAAGA+CGG | 0.564085 | tig0024068:-71406 | Msa1413850:CDS |
| TGTGAACGAAAATTTCACTT+GGG | 0.566723 | tig0024068:-71031 | Msa1413850:CDS |
| AGATCGCCTGAGAGAATCTG+AGG | 0.577144 | tig0024068:-71812 | Msa1413850:CDS |
| TCAGAAGTTTCTAATTCAGT+GGG | 0.578275 | tig0024068:-71661 | Msa1413850:CDS |
| CCTGAGAGAATCTGAGGGAA+CGG | 0.579608 | tig0024068:-71806 | Msa1413850:CDS |
| CTGATGAGGAGTTTCATCAA+AGG | 0.590006 | tig0024068:-70799 | Msa1413850:CDS |
| GGTATCAAGATCAACTTCAA+AGG | 0.591691 | tig0024068:-71713 | Msa1413850:CDS |
| ATGTGCCGTTTGTTGATGAA+GGG | 0.591926 | tig0024068:-70515 | Msa1413850:CDS |
| TTTAACAGAACCGGAACTAG+AGG | 0.594122 | tig0024068:+71753 | None:intergenic |
| CGACAGAGAGAATCCGAGGA+AGG | 0.596626 | tig0024068:-71886 | Msa1413850:CDS |
| TTATGTCTAGAGAAACTACT+AGG | 0.598338 | tig0024068:-70899 | Msa1413850:CDS |
| AAAGCGACAGAGAGAATCCG+AGG | 0.599141 | tig0024068:-71890 | Msa1413850:CDS |
| GGGAAAGTACTAAAGAGGGA+AGG | 0.603607 | tig0024068:-71625 | Msa1413850:CDS |
| TACTGCGATTATGGAGAAAG+GGG | 0.609394 | tig0024068:-70633 | Msa1413850:CDS |
| CATATTCTACAACAGCAACT+CGG | 0.614325 | tig0024068:+71121 | None:intergenic |
| TGTGCCGTTTGTTGATGAAG+GGG | 0.619488 | tig0024068:-70514 | Msa1413850:CDS |
| TTGACAATGTTACCAAAAGA+GGG | 0.620789 | tig0024068:-71528 | Msa1413850:CDS |
| AGTGTCTATAGCATCCTTGG+AGG | 0.622116 | tig0024068:+70442 | None:intergenic |
| TTTGTTGATGAAGGGGCTTG+AGG | 0.622358 | tig0024068:-70507 | Msa1413850:CDS |
| GTGAACGAAAATTTCACTTG+GGG | 0.624887 | tig0024068:-71030 | Msa1413850:CDS |
| AAATGAAGTTTCTAGTCACA+TGG | 0.625461 | tig0024068:-70978 | Msa1413850:CDS |
| AGAGGGAGTATCTCTTGTGA+AGG | 0.627844 | tig0024068:-71511 | Msa1413850:CDS |
| TGAGCTCAGCCAATCAAAAG+GGG | 0.629047 | tig0024068:-71345 | Msa1413850:CDS |
| GGTGACTTAATATTATGTGA+TGG | 0.647953 | tig0024068:-71220 | Msa1413850:CDS |
| GATCGCCTGAGAGAATCTGA+GGG | 0.652065 | tig0024068:-71811 | Msa1413850:CDS |
| GGTCCCAAACGAGATCCGGA+TGG | 0.671675 | tig0024068:-71166 | Msa1413850:CDS |
| TGGTAACATTGTCAATACCA+CGG | 0.676702 | tig0024068:+71536 | None:intergenic |
| ACTGCGATTATGGAGAAAGG+GGG | 0.694924 | tig0024068:-70632 | Msa1413850:CDS |
| AAGGAAGCGTAAATTGACTG+TGG | 0.704717 | tig0024068:-70780 | Msa1413850:CDS |
| TGGGACCTAAACAATCAGAG+TGG | 0.741486 | tig0024068:+71182 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATTATTGAAAAAAATAAT+TGG | - | tig0024068:71274-71293 | Msa1413850:CDS | 10.0% |
| !! | ACATTATTGAAAAAAATAAT+TGG | - | tig0024068:71274-71293 | Msa1413850:CDS | 10.0% |
| !!! | ATCAAATCTTTTTTAGATAA+AGG | + | tig0024068:71513-71532 | None:intergenic | 15.0% |
| !!! | ATCAAATCTTTTTTAGATAA+AGG | + | tig0024068:71513-71532 | None:intergenic | 15.0% |
| !!! | TTGTCTTCGATATTTTTTTT+TGG | + | tig0024068:71688-71707 | None:intergenic | 20.0% |
| !! | AAAAAAAAATATCGAAGACA+AGG | - | tig0024068:71687-71706 | Msa1413850:CDS | 20.0% |
| !! | TTATACTTTCTTTGAATTTC+AGG | - | tig0024068:71866-71885 | Msa1413850:CDS | 20.0% |
| !!! | TTGTCTTCGATATTTTTTTT+TGG | + | tig0024068:71688-71707 | None:intergenic | 20.0% |
| !! | AAAAAAAAATATCGAAGACA+AGG | - | tig0024068:71687-71706 | Msa1413850:CDS | 20.0% |
| !! | TTATACTTTCTTTGAATTTC+AGG | - | tig0024068:71866-71885 | Msa1413850:CDS | 20.0% |
| ! | TAAAAAAGCTACACTAACAA+CGG | - | tig0024068:70492-70511 | Msa1413850:CDS | 25.0% |
| !!! | TCTTCGATATTTTTTTTTGG+TGG | + | tig0024068:71685-71704 | None:intergenic | 25.0% |
| ! | TAAAAAAGCTACACTAACAA+CGG | - | tig0024068:70492-70511 | Msa1413850:CDS | 25.0% |
| !!! | TCTTCGATATTTTTTTTTGG+TGG | + | tig0024068:71685-71704 | None:intergenic | 25.0% |
| !!! | TGTAGCTTTTTTAACAGAAC+CGG | + | tig0024068:70485-70504 | None:intergenic | 30.0% |
| ATCAGAAGTTTCTAATTCAG+TGG | - | tig0024068:70564-70583 | Msa1413850:CDS | 30.0% | |
| TCAGAAGTTTCTAATTCAGT+GGG | - | tig0024068:70565-70584 | Msa1413850:CDS | 30.0% | |
| ATTGACAATGTTACCAAAAG+AGG | - | tig0024068:70697-70716 | Msa1413850:CDS | 30.0% | |
| TTGACAATGTTACCAAAAGA+GGG | - | tig0024068:70698-70717 | Msa1413850:CDS | 30.0% | |
| !! | AAAAGTATCTTCTTGGAAGA+CGG | - | tig0024068:70820-70839 | Msa1413850:CDS | 30.0% |
| TTGTAATGCTGAAGCAAAAT+CGG | - | tig0024068:70909-70928 | Msa1413850:CDS | 30.0% | |
| !!! | ACATGTTCTGTTTGTTGTTT+TGG | - | tig0024068:70982-71001 | Msa1413850:CDS | 30.0% |
| !!! | CATGTTCTGTTTGTTGTTTT+GGG | - | tig0024068:70983-71002 | Msa1413850:CDS | 30.0% |
| !!! | ATGTTCTGTTTGTTGTTTTG+GGG | - | tig0024068:70984-71003 | Msa1413850:CDS | 30.0% |
| GGTGACTTAATATTATGTGA+TGG | - | tig0024068:71006-71025 | Msa1413850:CDS | 30.0% | |
| ATGTGAACGAAAATTTCACT+TGG | - | tig0024068:71194-71213 | Msa1413850:CDS | 30.0% | |
| TGTGAACGAAAATTTCACTT+GGG | - | tig0024068:71195-71214 | Msa1413850:CDS | 30.0% | |
| ATGTGACTAGAAACTTCATT+TGG | + | tig0024068:71249-71268 | None:intergenic | 30.0% | |
| !! | AAATGAAGTTTCTAGTCACA+TGG | - | tig0024068:71248-71267 | Msa1413850:CDS | 30.0% |
| TTATGTCTAGAGAAACTACT+AGG | - | tig0024068:71327-71346 | Msa1413850:CDS | 30.0% | |
| TAGGAATACCAAATAAGCTT+GGG | - | tig0024068:71346-71365 | Msa1413850:CDS | 30.0% | |
| TATAATGTGAGTTGTGATGA+TGG | - | tig0024068:71396-71415 | Msa1413850:CDS | 30.0% | |
| ! | CTTTTGACCATAAATCCTTA+TGG | + | tig0024068:71640-71659 | None:intergenic | 30.0% |
| CATAAGGATTTATGGTCAAA+AGG | - | tig0024068:71638-71657 | Msa1413850:CDS | 30.0% | |
| AGTTGATTAACTTAGGAGTT+GGG | - | tig0024068:71745-71764 | Msa1413850:CDS | 30.0% | |
| !!! | TGTAGCTTTTTTAACAGAAC+CGG | + | tig0024068:70485-70504 | None:intergenic | 30.0% |
| ATCAGAAGTTTCTAATTCAG+TGG | - | tig0024068:70564-70583 | Msa1413850:CDS | 30.0% | |
| TCAGAAGTTTCTAATTCAGT+GGG | - | tig0024068:70565-70584 | Msa1413850:CDS | 30.0% | |
| ATTGACAATGTTACCAAAAG+AGG | - | tig0024068:70697-70716 | Msa1413850:CDS | 30.0% | |
| TTGACAATGTTACCAAAAGA+GGG | - | tig0024068:70698-70717 | Msa1413850:CDS | 30.0% | |
| !! | AAAAGTATCTTCTTGGAAGA+CGG | - | tig0024068:70820-70839 | Msa1413850:CDS | 30.0% |
| TTGTAATGCTGAAGCAAAAT+CGG | - | tig0024068:70909-70928 | Msa1413850:CDS | 30.0% | |
| !!! | ACATGTTCTGTTTGTTGTTT+TGG | - | tig0024068:70982-71001 | Msa1413850:CDS | 30.0% |
| !!! | CATGTTCTGTTTGTTGTTTT+GGG | - | tig0024068:70983-71002 | Msa1413850:CDS | 30.0% |
| !!! | ATGTTCTGTTTGTTGTTTTG+GGG | - | tig0024068:70984-71003 | Msa1413850:CDS | 30.0% |
| GGTGACTTAATATTATGTGA+TGG | - | tig0024068:71006-71025 | Msa1413850:CDS | 30.0% | |
| ATGTGAACGAAAATTTCACT+TGG | - | tig0024068:71194-71213 | Msa1413850:CDS | 30.0% | |
| TGTGAACGAAAATTTCACTT+GGG | - | tig0024068:71195-71214 | Msa1413850:CDS | 30.0% | |
| ATGTGACTAGAAACTTCATT+TGG | + | tig0024068:71249-71268 | None:intergenic | 30.0% | |
| !! | AAATGAAGTTTCTAGTCACA+TGG | - | tig0024068:71248-71267 | Msa1413850:CDS | 30.0% |
| TTATGTCTAGAGAAACTACT+AGG | - | tig0024068:71327-71346 | Msa1413850:CDS | 30.0% | |
| TAGGAATACCAAATAAGCTT+GGG | - | tig0024068:71346-71365 | Msa1413850:CDS | 30.0% | |
| TATAATGTGAGTTGTGATGA+TGG | - | tig0024068:71396-71415 | Msa1413850:CDS | 30.0% | |
| ! | CTTTTGACCATAAATCCTTA+TGG | + | tig0024068:71640-71659 | None:intergenic | 30.0% |
| CATAAGGATTTATGGTCAAA+AGG | - | tig0024068:71638-71657 | Msa1413850:CDS | 30.0% | |
| AGTTGATTAACTTAGGAGTT+GGG | - | tig0024068:71745-71764 | Msa1413850:CDS | 30.0% | |
| GGATAAATCAACTTCTGGTA+AGG | - | tig0024068:70441-70460 | Msa1413850:CDS | 35.0% | |
| GGTATCAAGATCAACTTCAA+AGG | - | tig0024068:70513-70532 | Msa1413850:CDS | 35.0% | |
| !! | AAAGAGGGAAAGTACTAAAG+AGG | - | tig0024068:70596-70615 | Msa1413850:CDS | 35.0% |
| !! | AAGAGGGAAAGTACTAAAGA+GGG | - | tig0024068:70597-70616 | Msa1413850:CDS | 35.0% |
| ! | TAAAGAGGGAAGGTATAAGA+GGG | - | tig0024068:70611-70630 | Msa1413850:CDS | 35.0% |
| !! | GAAGTGTTCTCAGTTGATAA+AGG | - | tig0024068:70633-70652 | Msa1413850:CDS | 35.0% |
| !! | TGTTCTCAGTTGATAAAGGA+TGG | - | tig0024068:70637-70656 | Msa1413850:CDS | 35.0% |
| !! | GTTGATAAAGGATGGAGTTT+TGG | - | tig0024068:70645-70664 | Msa1413850:CDS | 35.0% |
| TGGTAACATTGTCAATACCA+CGG | + | tig0024068:70693-70712 | None:intergenic | 35.0% | |
| ATTCACTCTCACCAAATTTG+AGG | - | tig0024068:70765-70784 | Msa1413850:CDS | 35.0% | |
| !! | ACCATCCAAAAGTATCTTCT+TGG | - | tig0024068:70813-70832 | Msa1413850:CDS | 35.0% |
| ! | TCCAAGAAGATACTTTTGGA+TGG | + | tig0024068:70817-70836 | None:intergenic | 35.0% |
| ! | GTCTTCCAAGAAGATACTTT+TGG | + | tig0024068:70821-70840 | None:intergenic | 35.0% |
| ! | ACAATCATTCCCCTTTTGAT+TGG | + | tig0024068:70893-70912 | None:intergenic | 35.0% |
| !!! | TGTTCTGTTTGTTGTTTTGG+GGG | - | tig0024068:70985-71004 | Msa1413850:CDS | 35.0% |
| CATATTCTACAACAGCAACT+CGG | + | tig0024068:71108-71127 | None:intergenic | 35.0% | |
| ! | GCAAATTCTTGTTTGCGTTT+GGG | + | tig0024068:71138-71157 | None:intergenic | 35.0% |
| ! | TGCAAATTCTTGTTTGCGTT+TGG | + | tig0024068:71139-71158 | None:intergenic | 35.0% |
| GTGAACGAAAATTTCACTTG+GGG | - | tig0024068:71196-71215 | Msa1413850:CDS | 35.0% | |
| TGTGTAAAGGCAACAAGAAT+TGG | - | tig0024068:71219-71238 | Msa1413850:CDS | 35.0% | |
| CTAGGAATACCAAATAAGCT+TGG | - | tig0024068:71345-71364 | Msa1413850:CDS | 35.0% | |
| AGATCATTCCCAAGCTTATT+TGG | + | tig0024068:71357-71376 | None:intergenic | 35.0% | |
| ! | GTTCAAACGTTTCTTTTCAG+AGG | + | tig0024068:71559-71578 | None:intergenic | 35.0% |
| AAGAAACGTTTGAACTTTCG+TGG | - | tig0024068:71564-71583 | Msa1413850:CDS | 35.0% | |
| TGGTTTCTATACTGCGATTA+TGG | - | tig0024068:71584-71603 | Msa1413850:CDS | 35.0% | |
| TATACTGCGATTATGGAGAA+AGG | - | tig0024068:71591-71610 | Msa1413850:CDS | 35.0% | |
| ATACTGCGATTATGGAGAAA+GGG | - | tig0024068:71592-71611 | Msa1413850:CDS | 35.0% | |
| GAGGAACAGTTGATTAACTT+AGG | - | tig0024068:71738-71757 | Msa1413850:CDS | 35.0% | |
| CAGTTGATTAACTTAGGAGT+TGG | - | tig0024068:71744-71763 | Msa1413850:CDS | 35.0% | |
| GAGACACTTTCTTTGTTAAG+TGG | + | tig0024068:71912-71931 | None:intergenic | 35.0% | |
| GGATAAATCAACTTCTGGTA+AGG | - | tig0024068:70441-70460 | Msa1413850:CDS | 35.0% | |
| GGTATCAAGATCAACTTCAA+AGG | - | tig0024068:70513-70532 | Msa1413850:CDS | 35.0% | |
| !! | AAAGAGGGAAAGTACTAAAG+AGG | - | tig0024068:70596-70615 | Msa1413850:CDS | 35.0% |
| !! | AAGAGGGAAAGTACTAAAGA+GGG | - | tig0024068:70597-70616 | Msa1413850:CDS | 35.0% |
| ! | TAAAGAGGGAAGGTATAAGA+GGG | - | tig0024068:70611-70630 | Msa1413850:CDS | 35.0% |
| !! | GAAGTGTTCTCAGTTGATAA+AGG | - | tig0024068:70633-70652 | Msa1413850:CDS | 35.0% |
| !! | TGTTCTCAGTTGATAAAGGA+TGG | - | tig0024068:70637-70656 | Msa1413850:CDS | 35.0% |
| !! | GTTGATAAAGGATGGAGTTT+TGG | - | tig0024068:70645-70664 | Msa1413850:CDS | 35.0% |
| TGGTAACATTGTCAATACCA+CGG | + | tig0024068:70693-70712 | None:intergenic | 35.0% | |
| ATTCACTCTCACCAAATTTG+AGG | - | tig0024068:70765-70784 | Msa1413850:CDS | 35.0% | |
| !! | ACCATCCAAAAGTATCTTCT+TGG | - | tig0024068:70813-70832 | Msa1413850:CDS | 35.0% |
| ! | TCCAAGAAGATACTTTTGGA+TGG | + | tig0024068:70817-70836 | None:intergenic | 35.0% |
| ! | GTCTTCCAAGAAGATACTTT+TGG | + | tig0024068:70821-70840 | None:intergenic | 35.0% |
| ! | ACAATCATTCCCCTTTTGAT+TGG | + | tig0024068:70893-70912 | None:intergenic | 35.0% |
| !!! | TGTTCTGTTTGTTGTTTTGG+GGG | - | tig0024068:70985-71004 | Msa1413850:CDS | 35.0% |
| CATATTCTACAACAGCAACT+CGG | + | tig0024068:71108-71127 | None:intergenic | 35.0% | |
| ! | GCAAATTCTTGTTTGCGTTT+GGG | + | tig0024068:71138-71157 | None:intergenic | 35.0% |
| ! | TGCAAATTCTTGTTTGCGTT+TGG | + | tig0024068:71139-71158 | None:intergenic | 35.0% |
| GTGAACGAAAATTTCACTTG+GGG | - | tig0024068:71196-71215 | Msa1413850:CDS | 35.0% | |
| TGTGTAAAGGCAACAAGAAT+TGG | - | tig0024068:71219-71238 | Msa1413850:CDS | 35.0% | |
| CTAGGAATACCAAATAAGCT+TGG | - | tig0024068:71345-71364 | Msa1413850:CDS | 35.0% | |
| AGATCATTCCCAAGCTTATT+TGG | + | tig0024068:71357-71376 | None:intergenic | 35.0% | |
| ! | GTTCAAACGTTTCTTTTCAG+AGG | + | tig0024068:71559-71578 | None:intergenic | 35.0% |
| AAGAAACGTTTGAACTTTCG+TGG | - | tig0024068:71564-71583 | Msa1413850:CDS | 35.0% | |
| TGGTTTCTATACTGCGATTA+TGG | - | tig0024068:71584-71603 | Msa1413850:CDS | 35.0% | |
| TATACTGCGATTATGGAGAA+AGG | - | tig0024068:71591-71610 | Msa1413850:CDS | 35.0% | |
| ATACTGCGATTATGGAGAAA+GGG | - | tig0024068:71592-71611 | Msa1413850:CDS | 35.0% | |
| GAGGAACAGTTGATTAACTT+AGG | - | tig0024068:71738-71757 | Msa1413850:CDS | 35.0% | |
| CAGTTGATTAACTTAGGAGT+TGG | - | tig0024068:71744-71763 | Msa1413850:CDS | 35.0% | |
| GAGACACTTTCTTTGTTAAG+TGG | + | tig0024068:71912-71931 | None:intergenic | 35.0% | |
| ! | TGTTGTTGTTGTTCCTTCCT+CGG | + | tig0024068:70356-70375 | None:intergenic | 40.0% |
| !! | AGGCGATCTTTTGACTGTAA+TGG | + | tig0024068:70403-70422 | None:intergenic | 40.0% |
| GGAACGGATAAATCAACTTC+TGG | - | tig0024068:70436-70455 | Msa1413850:CDS | 40.0% | |
| !! | GTTTCTAAAGCCTCTAGTTC+CGG | - | tig0024068:70463-70482 | Msa1413850:CDS | 40.0% |
| TTTAACAGAACCGGAACTAG+AGG | + | tig0024068:70476-70495 | None:intergenic | 40.0% | |
| GTTTCTAATTCAGTGGGTAG+TGG | - | tig0024068:70571-70590 | Msa1413850:CDS | 40.0% | |
| ! | CTAAAGAGGGAAGGTATAAG+AGG | - | tig0024068:70610-70629 | Msa1413850:CDS | 40.0% |
| !!! | AAGGATGGAGTTTTGGTTTC+TGG | - | tig0024068:70652-70671 | Msa1413850:CDS | 40.0% |
| !!! | AGGATGGAGTTTTGGTTTCT+GGG | - | tig0024068:70653-70672 | Msa1413850:CDS | 40.0% |
| ! | ACAAGAGATACTCCCTCTTT+TGG | + | tig0024068:70713-70732 | None:intergenic | 40.0% |
| ACAAGCATGAGCCTCAAATT+TGG | + | tig0024068:70779-70798 | None:intergenic | 40.0% | |
| TCGTTCCACTCTGATTGTTT+AGG | - | tig0024068:71039-71058 | Msa1413850:CDS | 40.0% | |
| ATTTCACTTGGGGTGTGTAA+AGG | - | tig0024068:71206-71225 | Msa1413850:CDS | 40.0% | |
| !! | TGGTTTTGCCATGAAGTTTG+TGG | - | tig0024068:71294-71313 | Msa1413850:CDS | 40.0% |
| ! | GGTTTTGCCATGAAGTTTGT+GGG | - | tig0024068:71295-71314 | Msa1413850:CDS | 40.0% |
| ACATGTTCCCACAAACTTCA+TGG | + | tig0024068:71305-71324 | None:intergenic | 40.0% | |
| AGCTTGGGAATGATCTAACT+TGG | - | tig0024068:71361-71380 | Msa1413850:CDS | 40.0% | |
| ! | TGATGGAGATTTTGCTGATG+AGG | - | tig0024068:71413-71432 | Msa1413850:CDS | 40.0% |
| CTGATGAGGAGTTTCATCAA+AGG | - | tig0024068:71427-71446 | Msa1413850:CDS | 40.0% | |
| ! | AAGGAAGCGTAAATTGACTG+TGG | - | tig0024068:71446-71465 | Msa1413850:CDS | 40.0% |
| TACTGCGATTATGGAGAAAG+GGG | - | tig0024068:71593-71612 | Msa1413850:CDS | 40.0% | |
| GTGGCAACCATAAGGATTTA+TGG | - | tig0024068:71630-71649 | Msa1413850:CDS | 40.0% | |
| ! | GGTTGCTGAGATTGTTTTCA+TGG | - | tig0024068:71659-71678 | Msa1413850:CDS | 40.0% |
| !! | AATGTGCCGTTTGTTGATGA+AGG | - | tig0024068:71710-71729 | Msa1413850:CDS | 40.0% |
| !! | ATGTGCCGTTTGTTGATGAA+GGG | - | tig0024068:71711-71730 | Msa1413850:CDS | 40.0% |
| ! | TGTTGTTGTTGTTCCTTCCT+CGG | + | tig0024068:70356-70375 | None:intergenic | 40.0% |
| !! | AGGCGATCTTTTGACTGTAA+TGG | + | tig0024068:70403-70422 | None:intergenic | 40.0% |
| GGAACGGATAAATCAACTTC+TGG | - | tig0024068:70436-70455 | Msa1413850:CDS | 40.0% | |
| !! | GTTTCTAAAGCCTCTAGTTC+CGG | - | tig0024068:70463-70482 | Msa1413850:CDS | 40.0% |
| TTTAACAGAACCGGAACTAG+AGG | + | tig0024068:70476-70495 | None:intergenic | 40.0% | |
| GTTTCTAATTCAGTGGGTAG+TGG | - | tig0024068:70571-70590 | Msa1413850:CDS | 40.0% | |
| ! | CTAAAGAGGGAAGGTATAAG+AGG | - | tig0024068:70610-70629 | Msa1413850:CDS | 40.0% |
| !!! | AAGGATGGAGTTTTGGTTTC+TGG | - | tig0024068:70652-70671 | Msa1413850:CDS | 40.0% |
| !!! | AGGATGGAGTTTTGGTTTCT+GGG | - | tig0024068:70653-70672 | Msa1413850:CDS | 40.0% |
| ! | ACAAGAGATACTCCCTCTTT+TGG | + | tig0024068:70713-70732 | None:intergenic | 40.0% |
| ACAAGCATGAGCCTCAAATT+TGG | + | tig0024068:70779-70798 | None:intergenic | 40.0% | |
| TCGTTCCACTCTGATTGTTT+AGG | - | tig0024068:71039-71058 | Msa1413850:CDS | 40.0% | |
| ATTTCACTTGGGGTGTGTAA+AGG | - | tig0024068:71206-71225 | Msa1413850:CDS | 40.0% | |
| !! | TGGTTTTGCCATGAAGTTTG+TGG | - | tig0024068:71294-71313 | Msa1413850:CDS | 40.0% |
| ! | GGTTTTGCCATGAAGTTTGT+GGG | - | tig0024068:71295-71314 | Msa1413850:CDS | 40.0% |
| ACATGTTCCCACAAACTTCA+TGG | + | tig0024068:71305-71324 | None:intergenic | 40.0% | |
| AGCTTGGGAATGATCTAACT+TGG | - | tig0024068:71361-71380 | Msa1413850:CDS | 40.0% | |
| ! | TGATGGAGATTTTGCTGATG+AGG | - | tig0024068:71413-71432 | Msa1413850:CDS | 40.0% |
| CTGATGAGGAGTTTCATCAA+AGG | - | tig0024068:71427-71446 | Msa1413850:CDS | 40.0% | |
| ! | AAGGAAGCGTAAATTGACTG+TGG | - | tig0024068:71446-71465 | Msa1413850:CDS | 40.0% |
| TACTGCGATTATGGAGAAAG+GGG | - | tig0024068:71593-71612 | Msa1413850:CDS | 40.0% | |
| GTGGCAACCATAAGGATTTA+TGG | - | tig0024068:71630-71649 | Msa1413850:CDS | 40.0% | |
| ! | GGTTGCTGAGATTGTTTTCA+TGG | - | tig0024068:71659-71678 | Msa1413850:CDS | 40.0% |
| !! | AATGTGCCGTTTGTTGATGA+AGG | - | tig0024068:71710-71729 | Msa1413850:CDS | 40.0% |
| !! | ATGTGCCGTTTGTTGATGAA+GGG | - | tig0024068:71711-71730 | Msa1413850:CDS | 40.0% |
| ! | TCAGTGGGTAGTGGTAAAAG+AGG | - | tig0024068:70580-70599 | Msa1413850:CDS | 45.0% |
| ! | CAGTGGGTAGTGGTAAAAGA+GGG | - | tig0024068:70581-70600 | Msa1413850:CDS | 45.0% |
| !! | GGGAAAGTACTAAAGAGGGA+AGG | - | tig0024068:70601-70620 | Msa1413850:CDS | 45.0% |
| !! | AGAGGGAGTATCTCTTGTGA+AGG | - | tig0024068:70715-70734 | Msa1413850:CDS | 45.0% |
| GGAAGACGGAACTTCATTGT+TGG | - | tig0024068:70834-70853 | Msa1413850:CDS | 45.0% | |
| CGGAACTTCATTGTTGGACT+TGG | - | tig0024068:70840-70859 | Msa1413850:CDS | 45.0% | |
| AGCTCAGAGCTTTCATTCGA+CGG | + | tig0024068:70867-70886 | None:intergenic | 45.0% | |
| TCTGAGCTCAGCCAATCAAA+AGG | - | tig0024068:70879-70898 | Msa1413850:CDS | 45.0% | |
| CTGAGCTCAGCCAATCAAAA+GGG | - | tig0024068:70880-70899 | Msa1413850:CDS | 45.0% | |
| TGAGCTCAGCCAATCAAAAG+GGG | - | tig0024068:70881-70900 | Msa1413850:CDS | 45.0% | |
| CAATCAGAGTGGAACGAAGA+AGG | + | tig0024068:71036-71055 | None:intergenic | 45.0% | |
| TGGGACCTAAACAATCAGAG+TGG | + | tig0024068:71047-71066 | None:intergenic | 45.0% | |
| TTTAGGTCCCAAACGAGATC+CGG | - | tig0024068:71056-71075 | Msa1413850:CDS | 45.0% | |
| CGTAAATTGACTGTGGCTCT+TGG | - | tig0024068:71453-71472 | Msa1413850:CDS | 45.0% | |
| ACTGCGATTATGGAGAAAGG+GGG | - | tig0024068:71594-71613 | Msa1413850:CDS | 45.0% | |
| TGAGTTCTGTGGCAACCATA+AGG | - | tig0024068:71622-71641 | Msa1413850:CDS | 45.0% | |
| !! | TGTGCCGTTTGTTGATGAAG+GGG | - | tig0024068:71712-71731 | Msa1413850:CDS | 45.0% |
| CAAGCCCCTTCATCAACAAA+CGG | + | tig0024068:71719-71738 | None:intergenic | 45.0% | |
| ! | TTTGTTGATGAAGGGGCTTG+AGG | - | tig0024068:71719-71738 | Msa1413850:CDS | 45.0% |
| TAACTTAGGAGTTGGGAGCT+TGG | - | tig0024068:71752-71771 | Msa1413850:CDS | 45.0% | |
| !!! | CTTGGTTTTGCATTCCTCCA+AGG | - | tig0024068:71770-71789 | Msa1413850:CDS | 45.0% |
| AGTGTCTATAGCATCCTTGG+AGG | + | tig0024068:71787-71806 | None:intergenic | 45.0% | |
| CCAAGTGTCTATAGCATCCT+TGG | + | tig0024068:71790-71809 | None:intergenic | 45.0% | |
| CCAAGGATGCTATAGACACT+TGG | - | tig0024068:71787-71806 | Msa1413850:CDS | 45.0% | |
| ! | TCAGTGGGTAGTGGTAAAAG+AGG | - | tig0024068:70580-70599 | Msa1413850:CDS | 45.0% |
| ! | CAGTGGGTAGTGGTAAAAGA+GGG | - | tig0024068:70581-70600 | Msa1413850:CDS | 45.0% |
| !! | GGGAAAGTACTAAAGAGGGA+AGG | - | tig0024068:70601-70620 | Msa1413850:CDS | 45.0% |
| !! | AGAGGGAGTATCTCTTGTGA+AGG | - | tig0024068:70715-70734 | Msa1413850:CDS | 45.0% |
| GGAAGACGGAACTTCATTGT+TGG | - | tig0024068:70834-70853 | Msa1413850:CDS | 45.0% | |
| CGGAACTTCATTGTTGGACT+TGG | - | tig0024068:70840-70859 | Msa1413850:CDS | 45.0% | |
| AGCTCAGAGCTTTCATTCGA+CGG | + | tig0024068:70867-70886 | None:intergenic | 45.0% | |
| TCTGAGCTCAGCCAATCAAA+AGG | - | tig0024068:70879-70898 | Msa1413850:CDS | 45.0% | |
| CTGAGCTCAGCCAATCAAAA+GGG | - | tig0024068:70880-70899 | Msa1413850:CDS | 45.0% | |
| TGAGCTCAGCCAATCAAAAG+GGG | - | tig0024068:70881-70900 | Msa1413850:CDS | 45.0% | |
| CAATCAGAGTGGAACGAAGA+AGG | + | tig0024068:71036-71055 | None:intergenic | 45.0% | |
| TGGGACCTAAACAATCAGAG+TGG | + | tig0024068:71047-71066 | None:intergenic | 45.0% | |
| TTTAGGTCCCAAACGAGATC+CGG | - | tig0024068:71056-71075 | Msa1413850:CDS | 45.0% | |
| CGTAAATTGACTGTGGCTCT+TGG | - | tig0024068:71453-71472 | Msa1413850:CDS | 45.0% | |
| ACTGCGATTATGGAGAAAGG+GGG | - | tig0024068:71594-71613 | Msa1413850:CDS | 45.0% | |
| TGAGTTCTGTGGCAACCATA+AGG | - | tig0024068:71622-71641 | Msa1413850:CDS | 45.0% | |
| !! | TGTGCCGTTTGTTGATGAAG+GGG | - | tig0024068:71712-71731 | Msa1413850:CDS | 45.0% |
| CAAGCCCCTTCATCAACAAA+CGG | + | tig0024068:71719-71738 | None:intergenic | 45.0% | |
| ! | TTTGTTGATGAAGGGGCTTG+AGG | - | tig0024068:71719-71738 | Msa1413850:CDS | 45.0% |
| TAACTTAGGAGTTGGGAGCT+TGG | - | tig0024068:71752-71771 | Msa1413850:CDS | 45.0% | |
| !!! | CTTGGTTTTGCATTCCTCCA+AGG | - | tig0024068:71770-71789 | Msa1413850:CDS | 45.0% |
| AGTGTCTATAGCATCCTTGG+AGG | + | tig0024068:71787-71806 | None:intergenic | 45.0% | |
| CCAAGTGTCTATAGCATCCT+TGG | + | tig0024068:71790-71809 | None:intergenic | 45.0% | |
| CCAAGGATGCTATAGACACT+TGG | - | tig0024068:71787-71806 | Msa1413850:CDS | 45.0% | |
| AAAGCGACAGAGAGAATCCG+AGG | - | tig0024068:70336-70355 | Msa1413850:CDS | 50.0% | |
| AGATCGCCTGAGAGAATCTG+AGG | - | tig0024068:70414-70433 | Msa1413850:CDS | 50.0% | |
| GATCGCCTGAGAGAATCTGA+GGG | - | tig0024068:70415-70434 | Msa1413850:CDS | 50.0% | |
| CCTGAGAGAATCTGAGGGAA+CGG | - | tig0024068:70420-70439 | Msa1413850:CDS | 50.0% | |
| ! | GGGACTATTGTTTTCTGCCG+TGG | - | tig0024068:70673-70692 | Msa1413850:CDS | 50.0% |
| AGACCATCCGGATCTCGTTT+GGG | + | tig0024068:71066-71085 | None:intergenic | 50.0% | |
| CATGTACCATCCAGACCATC+CGG | + | tig0024068:71078-71097 | None:intergenic | 50.0% | |
| AGGGGGTAAAGTGAGTTCTG+TGG | - | tig0024068:71611-71630 | Msa1413850:CDS | 50.0% | |
| AAAGCGACAGAGAGAATCCG+AGG | - | tig0024068:70336-70355 | Msa1413850:CDS | 50.0% | |
| AGATCGCCTGAGAGAATCTG+AGG | - | tig0024068:70414-70433 | Msa1413850:CDS | 50.0% | |
| GATCGCCTGAGAGAATCTGA+GGG | - | tig0024068:70415-70434 | Msa1413850:CDS | 50.0% | |
| CCTGAGAGAATCTGAGGGAA+CGG | - | tig0024068:70420-70439 | Msa1413850:CDS | 50.0% | |
| ! | GGGACTATTGTTTTCTGCCG+TGG | - | tig0024068:70673-70692 | Msa1413850:CDS | 50.0% |
| AGACCATCCGGATCTCGTTT+GGG | + | tig0024068:71066-71085 | None:intergenic | 50.0% | |
| CATGTACCATCCAGACCATC+CGG | + | tig0024068:71078-71097 | None:intergenic | 50.0% | |
| AGGGGGTAAAGTGAGTTCTG+TGG | - | tig0024068:71611-71630 | Msa1413850:CDS | 50.0% | |
| CGACAGAGAGAATCCGAGGA+AGG | - | tig0024068:70340-70359 | Msa1413850:CDS | 55.0% | |
| CCGTTCCCTCAGATTCTCTC+AGG | + | tig0024068:70423-70442 | None:intergenic | 55.0% | |
| CAGACCATCCGGATCTCGTT+TGG | + | tig0024068:71067-71086 | None:intergenic | 55.0% | |
| CAAACGAGATCCGGATGGTC+TGG | - | tig0024068:71065-71084 | Msa1413850:CDS | 55.0% | |
| CGGATGGTCTGGATGGTACA+TGG | - | tig0024068:71076-71095 | Msa1413850:CDS | 55.0% | |
| ! | GGTGTGCTGCGTGAGAGTTT+TGG | - | tig0024068:71474-71493 | Msa1413850:CDS | 55.0% |
| CGACAGAGAGAATCCGAGGA+AGG | - | tig0024068:70340-70359 | Msa1413850:CDS | 55.0% | |
| CCGTTCCCTCAGATTCTCTC+AGG | + | tig0024068:70423-70442 | None:intergenic | 55.0% | |
| CAGACCATCCGGATCTCGTT+TGG | + | tig0024068:71067-71086 | None:intergenic | 55.0% | |
| CAAACGAGATCCGGATGGTC+TGG | - | tig0024068:71065-71084 | Msa1413850:CDS | 55.0% | |
| CGGATGGTCTGGATGGTACA+TGG | - | tig0024068:71076-71095 | Msa1413850:CDS | 55.0% | |
| ! | GGTGTGCTGCGTGAGAGTTT+TGG | - | tig0024068:71474-71493 | Msa1413850:CDS | 55.0% |
| GGTCCCAAACGAGATCCGGA+TGG | - | tig0024068:71060-71079 | Msa1413850:CDS | 60.0% | |
| CGAGATCCGGATGGTCTGGA+TGG | - | tig0024068:71069-71088 | Msa1413850:CDS | 60.0% | |
| GGTCCCAAACGAGATCCGGA+TGG | - | tig0024068:71060-71079 | Msa1413850:CDS | 60.0% | |
| CGAGATCCGGATGGTCTGGA+TGG | - | tig0024068:71069-71088 | Msa1413850:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024068 | gene | 70307 | 71941 | 70307 | ID=Msa1413850;Name=Msa1413850 |
| tig0024068 | mRNA | 70307 | 71941 | 70307 | ID=Msa1413850-mRNA-1;Parent=Msa1413850;Name=Msa1413850-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|-1|0|1|-1|1|1|0|544 |
| tig0024068 | exon | 70307 | 71941 | 70307 | ID=Msa1413850-mRNA-1:exon:21423;Parent=Msa1413850-mRNA-1 |
| tig0024068 | CDS | 70307 | 71941 | 70307 | ID=Msa1413850-mRNA-1:cds;Parent=Msa1413850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
