AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1414130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1414130 MtrunA17_Chr4g0025051 81.911 586 78 3 1 577 1 567 0.0 878
Msa1414130 MtrunA17_Chr4g0025061 73.039 612 122 8 9 594 17 611 0.0 830
Msa1414130 MtrunA17_Chr4g0024391 73.265 490 110 3 124 594 1 488 0.0 686
Msa1414130 MtrunA17_Chr2g0322391 42.293 532 231 13 76 592 120 590 4.72e-103 324
Msa1414130 MtrunA17_Chr2g0288871 36.765 544 223 17 52 554 67 530 2.90e-77 255
Msa1414130 MtrunA17_Chr3g0099641 33.661 508 229 17 52 553 39 444 1.77e-67 226
Msa1414130 MtrunA17_Chr4g0075201 54.299 221 91 3 330 541 245 464 5.68e-63 215
Msa1414130 MtrunA17_Chr4g0024401 74.803 127 26 2 1 127 1 121 2.12e-54 181
Msa1414130 MtrunA17_Chr7g0270831 47.458 236 98 6 337 570 201 412 4.63e-53 187
Msa1414130 MtrunA17_Chr2g0302391 52.795 161 71 2 323 478 182 342 3.81e-46 168
Msa1414130 MtrunA17_Chr4g0051181 34.551 301 158 7 301 568 193 487 1.57e-34 137
Msa1414130 MtrunA17_Chr7g0216891 30.814 344 157 11 306 572 160 499 3.74e-34 137
Msa1414130 MtrunA17_Chr4g0060271 36.156 307 125 7 337 577 240 541 9.66e-28 118
Msa1414130 MtrunA17_Chr4g0001361 36.486 148 70 4 329 476 139 262 1.14e-23 102
Msa1414130 MtrunA17_Chr7g0218081 43.103 116 55 2 309 424 377 481 1.25e-23 104
Msa1414130 MtrunA17_Chr5g0418191 42.017 119 64 2 322 436 286 403 3.29e-23 102
Msa1414130 MtrunA17_Chr5g0418191 38.272 81 48 2 332 412 131 209 8.71e-11 64.3
Msa1414130 MtrunA17_Chr2g0333851 51.282 78 36 1 338 413 153 230 2.43e-22 98.2
Msa1414130 MtrunA17_Chr5g0419241 69.811 53 16 0 330 382 55 107 5.98e-22 91.3
Msa1414130 MtrunA17_Chr4g0042831 48.148 81 41 1 334 414 260 339 9.40e-22 97.8
Msa1414130 MtrunA17_Chr7g0224801 55.714 70 30 1 342 411 83 151 9.92e-22 92.8
Msa1414130 MtrunA17_Chr1g0150271 54.545 66 30 0 347 412 96 161 1.03e-21 95.1
Msa1414130 MtrunA17_Chr3g0101131 41.284 109 60 2 325 430 388 495 1.47e-21 99.0
Msa1414130 MtrunA17_Chr3g0079691 53.750 80 36 1 335 414 478 556 1.71e-21 99.0
Msa1414130 MtrunA17_Chr5g0432161 45.217 115 56 3 305 414 370 482 1.86e-21 98.6
Msa1414130 MtrunA17_Chr4g0004911 53.165 79 36 1 334 412 318 395 2.61e-21 97.4
Msa1414130 MtrunA17_Chr4g0004911 40.698 86 44 3 336 419 170 250 1.41e-11 67.0
Msa1414130 MtrunA17_Chr7g0243891 54.321 81 36 1 334 414 356 435 3.22e-21 97.4
Msa1414130 MtrunA17_Chr4g0051881 44.554 101 54 2 339 439 165 263 3.24e-21 95.1
Msa1414130 MtrunA17_Chr5g0445311 52.500 80 37 1 335 414 347 425 3.81e-21 97.4
Msa1414130 MtrunA17_Chr3g0136961 50.667 75 37 0 335 409 121 195 1.08e-20 92.8
Msa1414130 MtrunA17_Chr3g0106491 43.564 101 56 1 313 413 326 425 1.54e-20 95.1
Msa1414130 MtrunA17_Chr3g0106491 39.506 81 43 3 336 416 186 260 8.56e-11 64.7
Msa1414130 MtrunA17_Chr2g0294231 48.718 78 39 1 339 416 190 266 1.63e-20 94.0
Msa1414130 MtrunA17_Chr7g0270191 43.617 94 48 2 337 430 130 218 1.77e-20 92.4
Msa1414130 MtrunA17_Chr7g0249311 44.762 105 55 2 312 414 350 453 2.77e-20 95.1
Msa1414130 MtrunA17_Chr7g0249311 27.434 226 104 10 196 416 71 241 1.28e-11 67.8
Msa1414130 MtrunA17_Chr7g0270051 40.000 110 61 2 331 438 30 136 2.87e-20 90.9
Msa1414130 MtrunA17_Chr7g0249301 51.316 76 36 1 339 414 279 353 5.29e-20 92.4
Msa1414130 MtrunA17_Chr1g0194481 47.436 78 40 1 339 416 145 221 7.55e-20 90.9
Msa1414130 MtrunA17_Chr1g0150281 43.478 92 52 0 337 428 125 216 1.66e-19 89.4
Msa1414130 MtrunA17_Chr4g0068541 48.684 76 38 1 338 413 194 268 3.39e-19 90.5
Msa1414130 MtrunA17_Chr1g0150801 51.351 74 35 1 337 410 87 159 7.83e-19 84.0
Msa1414130 MtrunA17_Chr3g0129321 50.667 75 36 1 339 413 105 178 1.01e-18 85.1
Msa1414130 MtrunA17_Chr8g0386241 38.235 102 62 1 315 416 66 166 1.06e-18 84.3
Msa1414130 MtrunA17_Chr7g0248721 48.750 80 39 2 331 410 120 197 1.40e-18 84.7
Msa1414130 MtrunA17_Chr2g0293481 46.667 75 40 0 348 422 263 337 1.73e-18 88.6
Msa1414130 MtrunA17_Chr5g0443131 46.154 78 41 1 339 416 144 220 1.85e-18 86.7
Msa1414130 MtrunA17_Chr5g0447701 42.391 92 52 1 323 414 223 313 3.68e-18 87.0
Msa1414130 MtrunA17_Chr7g0263531 43.210 81 45 1 332 412 341 420 5.84e-18 86.7
Msa1414130 MtrunA17_Chr7g0263531 42.254 71 39 2 353 423 190 258 7.55e-11 64.7
Msa1414130 MtrunA17_Chr8g0379461 50.794 63 31 0 352 414 76 138 1.33e-17 82.8
Msa1414130 MtrunA17_Chr5g0418781 46.154 78 41 1 332 409 104 180 1.64e-17 83.2
Msa1414130 MtrunA17_Chr8g0383251 46.753 77 40 1 339 415 95 170 2.55e-17 80.5
Msa1414130 MtrunA17_Chr8g0387501 45.833 72 39 0 351 422 128 199 2.72e-17 82.4
Msa1414130 MtrunA17_Chr1g0147881 47.059 85 43 1 337 419 245 329 3.55e-17 83.2
Msa1414130 MtrunA17_Chr7g0248691 46.667 75 40 0 348 422 150 224 3.59e-17 83.2
Msa1414130 MtrunA17_Chr8g0348311 46.667 75 40 0 348 422 151 225 5.21e-17 82.8
Msa1414130 MtrunA17_Chr1g0202461 45.055 91 48 1 352 442 261 349 9.11e-17 82.8
Msa1414130 MtrunA17_Chr2g0319961 43.038 79 45 0 343 421 71 149 9.88e-17 80.5
Msa1414130 MtrunA17_Chr4g0053281 52.308 65 31 0 350 414 264 328 1.39e-16 81.3
Msa1414130 MtrunA17_Chr8g0335811 45.570 79 42 1 331 409 133 210 2.24e-16 78.6
Msa1414130 MtrunA17_Chr2g0289181 30.714 140 87 2 347 476 9 148 2.39e-16 79.0
Msa1414130 MtrunA17_Chr2g0284321 48.438 64 33 0 349 412 32 95 2.94e-16 78.2
Msa1414130 MtrunA17_Chr5g0401821 51.613 62 30 0 350 411 197 258 1.25e-15 77.4
Msa1414130 MtrunA17_Chr1g0188941 46.970 66 34 1 347 412 46 110 1.63e-15 73.2
Msa1414130 MtrunA17_Chr3g0129361 40.217 92 53 2 339 430 131 220 2.60e-15 75.5
Msa1414130 MtrunA17_Chr4g0074001 45.000 80 43 1 337 416 344 422 2.94e-15 79.0
Msa1414130 MtrunA17_Chr1g0184691 51.667 60 29 0 350 409 291 350 3.97e-15 77.4
Msa1414130 MtrunA17_Chr6g0485431 45.000 80 42 2 339 417 141 219 2.95e-14 74.7
Msa1414130 MtrunA17_Chr8g0383351 51.667 60 28 1 350 409 158 216 3.32e-14 72.4
Msa1414130 MtrunA17_Chr4g0071521 48.333 60 31 0 350 409 243 302 4.98e-14 73.6
Msa1414130 MtrunA17_Chr1g0189391 47.222 72 36 2 339 409 84 154 1.11e-13 72.8
Msa1414130 MtrunA17_Chr7g0228941 43.333 60 34 0 350 409 50 109 1.03e-12 65.5
Msa1414130 MtrunA17_Chr7g0244981 33.333 132 66 3 298 407 48 179 1.85e-12 68.2
Msa1414130 MtrunA17_Chr7g0238921 52.632 57 26 1 353 409 125 180 4.56e-12 67.4
Msa1414130 MtrunA17_Chr3g0139021 41.667 60 35 0 350 409 312 371 3.89e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1414130 AT4G04450.1 41.127 479 215 12 89 553 78 503 7.68e-87 280
Msa1414130 AT4G04450.2 40.909 462 206 12 106 553 1 409 2.89e-82 265
Msa1414130 AT1G62300.1 49.630 270 105 7 329 573 289 552 7.19e-62 214
Msa1414130 AT4G22070.4 70.946 148 42 1 331 477 276 423 9.65e-57 200
Msa1414130 AT4G22070.4 36.441 118 74 1 89 205 76 193 5.67e-13 72.0
Msa1414130 AT4G22070.3 70.946 148 42 1 331 477 276 423 9.65e-57 200
Msa1414130 AT4G22070.3 36.441 118 74 1 89 205 76 193 5.67e-13 72.0
Msa1414130 AT4G22070.2 70.946 148 42 1 331 477 276 423 9.65e-57 200
Msa1414130 AT4G22070.2 36.441 118 74 1 89 205 76 193 5.67e-13 72.0
Msa1414130 AT4G22070.1 70.946 148 42 1 331 477 276 423 9.65e-57 200
Msa1414130 AT4G22070.1 36.441 118 74 1 89 205 76 193 5.67e-13 72.0
Msa1414130 AT4G01720.1 40.273 293 128 7 286 550 170 443 5.48e-43 161
Msa1414130 AT1G68150.1 47.368 152 66 2 296 433 165 316 3.39e-38 145
Msa1414130 AT1G69810.2 46.386 166 82 4 323 487 116 275 5.83e-36 137
Msa1414130 AT1G69810.1 46.386 166 82 4 323 487 174 333 8.30e-36 139
Msa1414130 AT1G18860.1 45.109 184 89 3 335 511 222 400 4.40e-34 136
Msa1414130 AT5G15130.1 32.685 257 130 8 337 554 212 464 2.83e-29 122
Msa1414130 AT1G13960.2 51.899 79 37 1 334 412 238 315 1.15e-22 100
Msa1414130 AT1G13960.2 34.483 116 63 4 306 416 31 138 3.15e-11 65.9
Msa1414130 AT1G80840.1 48.718 78 38 1 338 413 130 207 1.60e-22 99.0
Msa1414130 AT1G13960.1 51.899 79 37 1 334 412 391 468 1.84e-22 101
Msa1414130 AT1G13960.1 34.483 116 63 4 306 416 184 291 2.01e-11 67.0
Msa1414130 AT2G03340.1 48.276 87 44 1 328 414 391 476 5.14e-22 100
Msa1414130 AT2G03340.1 50.000 60 28 2 353 412 251 308 1.87e-11 67.4
Msa1414130 AT2G25000.3 32.086 187 106 4 245 415 7 188 1.35e-21 94.7
Msa1414130 AT1G29860.1 44.681 94 46 2 337 430 121 208 1.37e-21 95.5
Msa1414130 AT2G25000.2 44.944 89 49 0 327 415 78 166 1.48e-21 94.4
Msa1414130 AT2G25000.4 44.944 89 49 0 327 415 78 166 1.48e-21 94.4
Msa1414130 AT2G25000.1 29.902 204 130 4 217 415 14 209 1.56e-21 95.1
Msa1414130 AT5G41570.1 44.444 99 50 2 339 437 85 178 2.11e-21 92.4
Msa1414130 AT1G64000.1 44.231 104 53 2 334 437 96 194 2.25e-21 92.8
Msa1414130 AT5G13080.1 54.795 73 32 1 339 411 54 125 2.30e-21 91.3
Msa1414130 AT4G18170.1 39.316 117 60 2 339 445 159 274 9.54e-21 94.0
Msa1414130 AT5G56270.1 52.500 80 37 1 335 414 470 548 1.03e-20 97.1
Msa1414130 AT5G46350.1 41.346 104 60 1 339 442 170 272 1.49e-20 93.6
Msa1414130 AT2G38470.1 50.617 81 39 1 334 414 344 423 1.84e-20 95.5
Msa1414130 AT4G31800.2 46.154 91 44 1 331 416 85 175 2.45e-20 91.3
Msa1414130 AT3G01080.2 45.349 86 46 1 327 412 319 403 2.63e-20 94.7
Msa1414130 AT3G01080.1 45.349 86 46 1 327 412 281 365 3.08e-20 94.0
Msa1414130 AT4G31800.1 54.545 66 30 0 351 416 175 240 3.48e-20 92.0
Msa1414130 AT4G26640.5 48.750 80 40 1 335 414 188 266 4.25e-20 93.2
Msa1414130 AT4G26640.6 48.750 80 40 1 335 414 188 266 4.25e-20 93.2
Msa1414130 AT4G26640.4 48.750 80 40 1 335 414 188 266 4.25e-20 93.2
Msa1414130 AT4G26640.3 48.750 80 40 1 335 414 188 266 4.25e-20 93.2
Msa1414130 AT2G30250.1 43.158 95 52 2 322 416 299 391 5.67e-20 92.8
Msa1414130 AT5G26170.1 51.389 72 34 1 338 409 99 169 7.13e-20 87.8
Msa1414130 AT3G01970.1 54.167 72 32 1 338 409 51 121 8.68e-20 86.7
Msa1414130 AT4G26640.7 48.750 80 40 1 335 414 324 402 8.69e-20 93.6
Msa1414130 AT4G26640.1 48.750 80 40 1 335 414 292 370 9.20e-20 93.2
Msa1414130 AT4G26640.2 48.750 80 40 1 335 414 364 442 1.12e-19 93.2
Msa1414130 AT5G49520.1 45.000 80 43 1 337 416 206 284 1.26e-19 92.0
Msa1414130 AT2G04880.2 41.758 91 52 1 322 412 253 342 1.63e-19 92.0
Msa1414130 AT2G04880.2 35.385 130 78 4 348 476 107 231 4.54e-13 72.0
Msa1414130 AT2G04880.1 41.758 91 52 1 322 412 277 366 1.99e-19 92.0
Msa1414130 AT2G04880.1 48.529 68 33 2 348 415 107 172 6.70e-13 71.6
Msa1414130 AT5G07100.2 48.148 81 41 1 332 412 121 200 3.63e-19 87.0
Msa1414130 AT5G07100.4 48.148 81 41 1 332 412 121 200 3.63e-19 87.0
Msa1414130 AT5G07100.5 48.148 81 41 1 332 412 121 200 3.63e-19 87.0
Msa1414130 AT5G07100.3 48.148 81 41 1 332 412 121 200 3.63e-19 87.0
Msa1414130 AT5G64810.1 49.462 93 43 2 320 409 75 166 3.70e-19 86.3
Msa1414130 AT2G46130.1 50.000 72 35 1 339 410 17 87 5.64e-19 83.2
Msa1414130 AT5G07100.1 45.882 85 45 1 332 416 214 297 6.58e-19 88.2
Msa1414130 AT2G47260.1 45.783 83 44 1 337 419 159 240 1.20e-18 88.2
Msa1414130 AT5G52830.1 46.341 82 44 0 341 422 154 235 3.32e-18 87.0
Msa1414130 AT1G30650.1 48.649 74 38 0 346 419 211 284 4.03e-18 87.4
Msa1414130 AT1G69310.4 46.667 75 39 1 335 409 130 203 6.76e-18 84.7
Msa1414130 AT1G69310.2 46.667 75 39 1 335 409 130 203 6.76e-18 84.7
Msa1414130 AT1G69310.1 46.667 75 39 1 335 409 130 203 6.76e-18 84.7
Msa1414130 AT2G30590.1 55.224 67 29 1 350 415 311 377 7.45e-18 86.3
Msa1414130 AT3G62340.1 51.351 74 35 1 339 412 105 177 7.87e-18 84.3
Msa1414130 AT2G34830.1 47.297 74 39 0 346 419 209 282 9.82e-18 86.3
Msa1414130 AT2G34830.2 47.297 74 39 0 346 419 218 291 1.18e-17 86.3
Msa1414130 AT1G29280.1 47.143 70 37 0 343 412 65 134 1.52e-17 83.2
Msa1414130 AT3G58710.1 45.205 73 40 0 343 415 62 134 1.63e-17 83.6
Msa1414130 AT3G58710.2 45.205 73 40 0 343 415 61 133 1.68e-17 83.6
Msa1414130 AT4G26440.1 37.600 125 73 2 339 463 359 478 2.31e-17 85.9
Msa1414130 AT4G30935.1 35.556 135 85 2 309 442 288 421 3.40e-17 85.1
Msa1414130 AT4G01250.1 46.667 75 40 0 348 422 124 198 3.48e-17 83.2
Msa1414130 AT2G23320.1 55.932 59 26 0 353 411 241 299 7.20e-17 82.4
Msa1414130 AT4G23550.1 44.737 76 42 0 347 422 135 210 2.04e-16 80.9
Msa1414130 AT1G55600.1 46.053 76 40 1 339 414 294 368 3.39e-16 82.0
Msa1414130 AT2G44745.1 43.038 79 44 1 331 409 124 201 5.26e-16 77.8
Msa1414130 AT4G24240.1 53.226 62 29 0 350 411 279 340 6.04e-16 80.1
Msa1414130 AT5G28650.1 53.333 60 28 0 350 409 260 319 8.05e-16 79.3
Msa1414130 AT3G04670.1 53.333 60 28 0 350 409 260 319 1.82e-15 78.6
Msa1414130 AT4G39410.1 47.887 71 36 1 339 409 210 279 3.81e-15 77.0
Msa1414130 AT5G45050.4 47.059 68 36 0 352 419 1041 1108 4.73e-15 79.3
Msa1414130 AT5G45050.2 47.059 68 36 0 352 419 1152 1219 4.74e-15 79.3
Msa1414130 AT5G45050.1 47.059 68 36 0 352 419 1180 1247 4.81e-15 79.3
Msa1414130 AT4G31550.1 53.333 60 28 0 350 409 244 303 5.07e-15 77.0
Msa1414130 AT4G31550.2 53.333 60 28 0 350 409 243 302 5.11e-15 77.0
Msa1414130 AT2G46130.2 47.222 72 33 2 339 410 17 83 1.08e-14 70.9
Msa1414130 AT2G24570.1 51.667 60 29 0 350 409 241 300 2.45e-14 74.7
Msa1414130 AT2G37260.2 40.000 100 53 2 312 411 233 325 2.68e-14 75.1
Msa1414130 AT2G37260.3 40.000 100 53 2 312 411 235 327 2.81e-14 75.1
Msa1414130 AT2G37260.1 50.769 65 31 1 347 411 344 407 4.85e-14 75.1
Msa1414130 AT2G21900.1 32.143 112 70 2 304 415 66 171 5.04e-14 71.6
Msa1414130 AT5G45260.1 39.785 93 50 2 336 426 1196 1284 9.42e-12 68.9

Find 111 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATAAAATTGCAGGAAAATT+TGG 0.122453 tig0024090:+38337 None:intergenic
CCTAACTGATCTTTACTTAT+AGG 0.125256 tig0024090:+39816 None:intergenic
AATAGAGTTTGATTTCTTTA+AGG 0.143956 tig0024090:-43009 Msa1414130:CDS
GAAGTTTATGATGGAAAATT+TGG 0.188184 tig0024090:-40065 Msa1414130:CDS
GTTCTCTTGTCTTCTGAATT+AGG 0.194946 tig0024090:+42661 None:intergenic
TTGACTGCCCGAGCAATATT+TGG 0.235969 tig0024090:+38379 None:intergenic
GCAGAAGTCTGACGGTTTAA+AGG 0.243460 tig0024090:+38484 None:intergenic
AACTCAAGGTTAATATTAAC+TGG 0.250989 tig0024090:+43146 None:intergenic
TCCCTTTCCTAGTTAATATT+AGG 0.292067 tig0024090:-43079 Msa1414130:CDS
CGATAATACGCTTTAGGAAA+TGG 0.298424 tig0024090:+39503 None:intergenic
AATAAGGTTATGGAAGTTAA+AGG 0.322766 tig0024090:-40092 Msa1414130:CDS
ACTGGTGCCAAGGAAAATTA+TGG 0.327217 tig0024090:-40132 Msa1414130:CDS
TCAAGTGTAATGGTTGGAAA+TGG 0.343703 tig0024090:+38559 None:intergenic
AAAGGAGTTTGAAACTGATC+TGG 0.348918 tig0024090:+38502 None:intergenic
CTGCAACGATAATACGCTTT+AGG 0.349365 tig0024090:+39497 None:intergenic
CTTGTTTCATTAGATGAGAT+TGG 0.354120 tig0024090:+43032 None:intergenic
AACTGATCTGGGTTCCTTTG+TGG 0.354361 tig0024090:+38514 None:intergenic
TTGTGTCCCTTCAAAACTAT+TGG 0.363975 tig0024090:-38407 Msa1414130:CDS
AAAAGGAAATTTGTTGATGC+TGG 0.369100 tig0024090:-40005 Msa1414130:CDS
CTACTAGTATTGGTAGTAAC+AGG 0.370957 tig0024090:+42715 None:intergenic
GATGCAAGATTGTAAGGTTA+AGG 0.371759 tig0024090:-40222 Msa1414130:CDS
GCCATTTCTTTGGCTGCTGC+AGG 0.373631 tig0024090:+38718 None:intergenic
TCTTGGATCAGCTACTAATA+AGG 0.377634 tig0024090:-40108 Msa1414130:CDS
TAGTGATACATCATCTTTGT+TGG 0.382295 tig0024090:-42925 Msa1414130:CDS
TGCTGGGTTGGCTACTAATA+AGG 0.384058 tig0024090:-39988 Msa1414130:CDS
CCAAGGAAAATTATGGATCT+TGG 0.393916 tig0024090:-40125 Msa1414130:CDS
TCTTTGGCTGCTGCAGGTAA+AGG 0.394516 tig0024090:+38724 None:intergenic
AAGGTCAAAGAAGTGTTTAA+TGG 0.396617 tig0024090:-39969 Msa1414130:CDS
TAACATCCTCATTCTTACTT+AGG 0.406214 tig0024090:+39751 None:intergenic
TTTCAGATGGCTATTCTTCA+AGG 0.408471 tig0024090:-40344 Msa1414130:intron
GGATGTCAATGGAGAAAGTA+TGG 0.409848 tig0024090:-39548 Msa1414130:CDS
CAAGTGTAATGGTTGGAAAT+GGG 0.411437 tig0024090:+38560 None:intergenic
AAGCTTCGAGGAGGCTTTGA+AGG 0.419669 tig0024090:-39781 Msa1414130:CDS
CTTTGGCTGCTGCAGGTAAA+GGG 0.420375 tig0024090:+38725 None:intergenic
ATCAGCTACTAATAAGGTTA+TGG 0.421535 tig0024090:-40102 Msa1414130:CDS
GATAATACGCTTTAGGAAAT+GGG 0.422168 tig0024090:+39504 None:intergenic
TAGATGAGATTGGAGAGGTT+TGG 0.425712 tig0024090:+43042 None:intergenic
GCTACTCTTACTTCCATGAT+TGG 0.436300 tig0024090:-38313 Msa1414130:CDS
AGAGTAGCTGATAAAATTGC+AGG 0.438645 tig0024090:+38328 None:intergenic
CTATGAATATGATCCTTGTC+GGG 0.440174 tig0024090:+42945 None:intergenic
GGGTTCCTTTGTGGAGTAGT+TGG 0.444283 tig0024090:+38523 None:intergenic
CAGAAGACAAGAGAACTAAG+AGG 0.448055 tig0024090:-42654 Msa1414130:CDS
GAAAGTGATGCAAGATTGTA+AGG 0.455429 tig0024090:-40228 Msa1414130:CDS
GTAGCAGCAGTAGTGTTGTT+TGG 0.455433 tig0024090:+38280 None:intergenic
ACCTGCAGCAGCCAAAGAAA+TGG 0.461509 tig0024090:-38719 Msa1414130:CDS
CCTATAAGTAAAGATCAGTT+AGG 0.468887 tig0024090:-39816 Msa1414130:CDS
AGTTGGTGCAAAGGCAATGT+AGG 0.470135 tig0024090:-39908 Msa1414130:CDS
ACATCAACAACAAGCAATGA+TGG 0.474277 tig0024090:-38658 Msa1414130:CDS
ACAGGTAGCAACAACAAAGA+TGG 0.479242 tig0024090:-38199 Msa1414130:CDS
AAAGGACAAGAAGTTTATGA+TGG 0.480807 tig0024090:-40074 Msa1414130:CDS
GACCTAATATTAACTAGGAA+AGG 0.482637 tig0024090:+43077 None:intergenic
ACTATGAATATGATCCTTGT+CGG 0.485934 tig0024090:+42944 None:intergenic
TGGTTGCTCAGTCCGAAAAC+AGG 0.487721 tig0024090:-39465 Msa1414130:intron
AATGGGAACAATGTCGCAAA+AGG 0.491408 tig0024090:-38241 Msa1414130:CDS
GGCAGTTCCAAATATTGCTC+GGG 0.494464 tig0024090:-38386 Msa1414130:CDS
AGCTGAGAATGGTGGAGTAC+TGG 0.504825 tig0024090:-40150 Msa1414130:CDS
CTCTGCCTCTGTCCCCGACA+AGG 0.510437 tig0024090:-42958 Msa1414130:CDS
TGGCAGTTCCAAATATTGCT+CGG 0.513777 tig0024090:-38387 Msa1414130:CDS
AAGGAGTTTGAAACTGATCT+GGG 0.518182 tig0024090:+38503 None:intergenic
TAGTAGTGATCAATCTATGA+TGG 0.520634 tig0024090:-42698 Msa1414130:CDS
TGGCTGAGTATCACCAATCA+TGG 0.521571 tig0024090:+38300 None:intergenic
ATTAACTGGATTTGAATCCA+TGG 0.524287 tig0024090:+43160 None:intergenic
TGGGACTAAGTTTCAACTCA+AGG 0.529586 tig0024090:+43132 None:intergenic
ACCTAATATTAACTAGGAAA+GGG 0.529628 tig0024090:+43078 None:intergenic
ATGGTGGAGAATTAGTGAAA+AGG 0.530673 tig0024090:-40022 Msa1414130:CDS
GAAATTTGTTGATGCTGGGT+TGG 0.532637 tig0024090:-40000 Msa1414130:CDS
AGGAATTTGCAGAAGTCTGA+CGG 0.535434 tig0024090:+38476 None:intergenic
GTTGTCATCACAACATATGA+AGG 0.537947 tig0024090:-38760 Msa1414130:CDS
AGTATTGGTAGTAACAGGAT+TGG 0.539477 tig0024090:+42720 None:intergenic
AGGCAGAGACAACTTCTTGA+TGG 0.540615 tig0024090:+42973 None:intergenic
TTGAGTATAATCAAGTGTAA+TGG 0.545850 tig0024090:+38549 None:intergenic
AAAGGAAATTTGTTGATGCT+GGG 0.547546 tig0024090:-40004 Msa1414130:CDS
AGATTGATCACTACTAGTAT+TGG 0.549551 tig0024090:+42705 None:intergenic
AGATTACAATTACATGCGAA+TGG 0.550976 tig0024090:-40258 Msa1414130:CDS
TGTAAGGTTAAGGAAGTCAA+AGG 0.554949 tig0024090:-40212 Msa1414130:CDS
TGGAGGACCTAATATTAACT+AGG 0.555671 tig0024090:+43072 None:intergenic
GTTAGTCCTAAGTAAGAATG+AGG 0.558419 tig0024090:-39757 Msa1414130:CDS
GTATTGGTAGTAACAGGATT+GGG 0.564404 tig0024090:+42721 None:intergenic
TTATTGTGTTAGATCACTGA+TGG 0.564668 tig0024090:-39569 Msa1414130:intron
AATTGAGAATGATGGAGAGT+TGG 0.565162 tig0024090:-39925 Msa1414130:CDS
ATGATCCTTGTCGGGGACAG+AGG 0.567680 tig0024090:+42953 None:intergenic
AAAATTTGGATTAGCAGCAA+TGG 0.568779 tig0024090:+38351 None:intergenic
ACTTAGTCCCAACGAAAACA+TGG 0.569432 tig0024090:-43120 Msa1414130:CDS
GTCGCAAAAGGTAATAACAA+TGG 0.570392 tig0024090:-38229 Msa1414130:CDS
TTGAGAGATCAGAGAAGCTG+AGG 0.571353 tig0024090:+38456 None:intergenic
GTATAATCAAGTGTAATGGT+TGG 0.576480 tig0024090:+38553 None:intergenic
AATAACAATGGAAATATCAC+AGG 0.579865 tig0024090:-38217 Msa1414130:CDS
CAGGTAGCAACAACAAAGAT+GGG 0.581390 tig0024090:-38198 Msa1414130:CDS
GTTGGTGCAAAGGCAATGTA+GGG 0.584702 tig0024090:-39907 Msa1414130:CDS
TACTAATGCTGAGACTGTGA+TGG 0.589292 tig0024090:-39871 Msa1414130:CDS
CAATACTTGAAGAACAAGGA+AGG 0.589537 tig0024090:+38602 None:intergenic
AAGTGTAATGGTTGGAAATG+GGG 0.590397 tig0024090:+38561 None:intergenic
ATGATGGAGAGTTGGTGCAA+AGG 0.595504 tig0024090:-39917 Msa1414130:CDS
TTCAAACTTAACAGGTACAA+AGG 0.596299 tig0024090:-38801 Msa1414130:intron
AGAAGACAAGAGAACTAAGA+GGG 0.598740 tig0024090:-42653 Msa1414130:CDS
ATCAGCGTTGAAAAGCTTCG+AGG 0.603132 tig0024090:-39793 Msa1414130:CDS
AATACTTGAAGAACAAGGAA+GGG 0.605302 tig0024090:+38603 None:intergenic
TAGCAACAACAAAGATGGGA+AGG 0.605972 tig0024090:-38194 Msa1414130:CDS
ATGGTGGAGTACTGGTGCCA+AGG 0.608936 tig0024090:-40142 Msa1414130:CDS
TATCGTTGCAGCATGGCCCG+TGG 0.614367 tig0024090:-39485 Msa1414130:CDS
TTCATTAGATGAGATTGGAG+AGG 0.619862 tig0024090:+43037 None:intergenic
AGATCACTGATGGATGTCAA+TGG 0.621939 tig0024090:-39559 Msa1414130:CDS
ATACTTGAAGAACAAGGAAG+GGG 0.623529 tig0024090:+38604 None:intergenic
TGGCTGCTGCAGGTAAAGGG+TGG 0.624702 tig0024090:+38728 None:intergenic
AGCGTATTATCGTTGCAGCA+TGG 0.651842 tig0024090:-39492 Msa1414130:CDS
TGTTAATGTTGAAAATGTTG+AGG 0.658284 tig0024090:-39733 Msa1414130:CDS
AGACAAGAGAACTAAGAGGG+AGG 0.677564 tig0024090:-42650 Msa1414130:intron
AATCTCCAACTACTCCACAA+AGG 0.678231 tig0024090:-38528 Msa1414130:CDS
TATGAATATGATCCTTGTCG+GGG 0.678269 tig0024090:+42946 None:intergenic
AGCGTTGAAAAGCTTCGAGG+AGG 0.678382 tig0024090:-39790 Msa1414130:CDS
GTTGCAATACTTGAAGAACA+AGG 0.694121 tig0024090:+38598 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAGTTGAAAAAATTAAAA+TGG + tig0024090:38925-38944 None:intergenic 10.0%
!! TGAATAAATAAATTCAATTT+AGG + tig0024090:39417-39436 None:intergenic 10.0%
!! ACTGATAATAATAATAATAA+TGG - tig0024090:43088-43107 Msa1414130:CDS 10.0%
!! CTGATAATAATAATAATAAT+GGG - tig0024090:43089-43108 Msa1414130:CDS 10.0%
!!! ATATATATAATTTTCTTGGT+TGG - tig0024090:39006-39025 Msa1414130:intron 15.0%
!! TGTACTATACTTATAAATAT+AGG + tig0024090:39068-39087 None:intergenic 15.0%
!! TTATCTATGGTTAAAATAAA+GGG + tig0024090:39131-39150 None:intergenic 15.0%
!! ATTATCTATGGTTAAAATAA+AGG + tig0024090:39132-39151 None:intergenic 15.0%
!! GAAAACATAATTATTATCTA+TGG + tig0024090:39144-39163 None:intergenic 15.0%
!!! ATTTTTTTCTCTCTTTTATT+TGG - tig0024090:39353-39372 Msa1414130:intron 15.0%
!!! CACTTAACAAATTTTTTTAA+CGG - tig0024090:40467-40486 Msa1414130:intron 15.0%
!!! TAGAATATTTTTATGTGATT+TGG - tig0024090:40747-40766 Msa1414130:intron 15.0%
!! AATAATCGAATTCAATTTAA+TGG - tig0024090:40886-40905 Msa1414130:intron 15.0%
!! AAATATCATCACATAAAAAA+TGG + tig0024090:40967-40986 None:intergenic 15.0%
!!! ATGCATATTTAAGTTTTTAA+TGG + tig0024090:42353-42372 None:intergenic 15.0%
!!! AATAGAGTTTGATTTCTTTA+AGG - tig0024090:38338-38357 Msa1414130:CDS 20.0%
!! AATACGTAGAAAAAAACAAT+GGG + tig0024090:38484-38503 None:intergenic 20.0%
!! TAATACGTAGAAAAAAACAA+TGG + tig0024090:38485-38504 None:intergenic 20.0%
!!! TTATGATCATCTTGATAATT+TGG - tig0024090:38571-38590 Msa1414130:CDS 20.0%
!!! ATTTTTTTCCTTCCATTTAT+TGG - tig0024090:38769-38788 Msa1414130:CDS 20.0%
!! AAAAATTAAAATGGAAGTGA+GGG + tig0024090:38916-38935 None:intergenic 20.0%
!! AAAAAATTAAAATGGAAGTG+AGG + tig0024090:38917-38936 None:intergenic 20.0%
!! TATCTATGGTTAAAATAAAG+GGG + tig0024090:39130-39149 None:intergenic 20.0%
!!! CACTTAACAGATTTTTTTAA+CGG + tig0024090:39568-39587 None:intergenic 20.0%
!! AATATCATCAATTTACTGTT+AGG - tig0024090:39751-39770 Msa1414130:CDS 20.0%
!! TGCTTATAATTTAGCAATTT+CGG + tig0024090:39944-39963 None:intergenic 20.0%
!! ATGACTTAATAGTTATGTTA+TGG - tig0024090:40076-40095 Msa1414130:CDS 20.0%
!!! AAACATTTGTTATCAAACTA+TGG - tig0024090:40099-40118 Msa1414130:CDS 20.0%
!! ACTAAAGTGAAAGTAAAATA+TGG + tig0024090:40406-40425 None:intergenic 20.0%
!! ATATTTGTTTCACAAATAAG+AGG + tig0024090:40775-40794 None:intergenic 20.0%
!! TAGTTAAAATACTAATGAAG+TGG - tig0024090:42490-42509 Msa1414130:intron 20.0%
! AACTCAAGGTTAATATTAAC+TGG + tig0024090:38204-38223 None:intergenic 25.0%
! ACCTAATATTAACTAGGAAA+GGG + tig0024090:38272-38291 None:intergenic 25.0%
! AACAATGGGATATTGAATTA+TGG + tig0024090:38470-38489 None:intergenic 25.0%
!!! TATTTTTTTCTTCAACAGCT+TGG - tig0024090:38602-38621 Msa1414130:CDS 25.0%
! TAAGTTCATTAAATTCAGCT+AGG + tig0024090:38737-38756 None:intergenic 25.0%
!!! ATTTTGATCCAATAAATGGA+AGG + tig0024090:38780-38799 None:intergenic 25.0%
!!! CTCAATTTTGATCCAATAAA+TGG + tig0024090:38784-38803 None:intergenic 25.0%
!!! TATAATTTTCTTGGTTGGTT+TGG - tig0024090:39011-39030 Msa1414130:intron 25.0%
! CTAAAGTGAAAGGAAAAAAA+TGG - tig0024090:39630-39649 Msa1414130:intron 25.0%
!! AAGGAAAAAAATGGTCATTT+TGG - tig0024090:39639-39658 Msa1414130:intron 25.0%
!!! TGATATTGATTTTCGATTCA+GGG + tig0024090:39738-39757 None:intergenic 25.0%
!!! ATGATATTGATTTTCGATTC+AGG + tig0024090:39739-39758 None:intergenic 25.0%
! TAATTTCGTGTTTACTATCA+GGG + tig0024090:39810-39829 None:intergenic 25.0%
! TGATAGTAAACACGAAATTA+GGG - tig0024090:39810-39829 Msa1414130:CDS 25.0%
! ACTAAAAAACATCACATAGT+TGG + tig0024090:39910-39929 None:intergenic 25.0%
! CTAAATTATAAGCACAATTG+TGG - tig0024090:39950-39969 Msa1414130:CDS 25.0%
! TTGAATTATATGCCCAAATA+TGG - tig0024090:40020-40039 Msa1414130:CDS 25.0%
! TAAAAGTTTGCACCATATTT+GGG + tig0024090:40035-40054 None:intergenic 25.0%
! TTAAAAGTTTGCACCATATT+TGG + tig0024090:40036-40055 None:intergenic 25.0%
!!! GCAAACTTTTAATTACTCTA+TGG - tig0024090:40044-40063 Msa1414130:CDS 25.0%
! AAATTTCGTGTTTAATGTCA+GGG - tig0024090:40226-40245 Msa1414130:CDS 25.0%
! AATATCCTCAATTTACTGTT+AGG + tig0024090:39679-39698 None:intergenic 25.0%
! AAAGTAAAATATGGTCACTT+TGG + tig0024090:40397-40416 None:intergenic 25.0%
!!! AAATTTGTTAAGTGATGATG+TGG + tig0024090:40461-40480 None:intergenic 25.0%
!!! AACAAATTTTTTTAACGGCA+AGG - tig0024090:40472-40491 Msa1414130:intron 25.0%
! TTTGTATTTAATCTTGAGTC+AGG - tig0024090:40532-40551 Msa1414130:intron 25.0%
! TTGTATTTAATCTTGAGTCA+GGG - tig0024090:40533-40552 Msa1414130:intron 25.0%
! TTAGAACACTATTAACATGA+TGG - tig0024090:40838-40857 Msa1414130:intron 25.0%
! TAGAACACTATTAACATGAT+GGG - tig0024090:40839-40858 Msa1414130:intron 25.0%
!! CATCACATAAAAAATGGATT+TGG + tig0024090:40961-40980 None:intergenic 25.0%
!! AAAGGAAAAGAAGTTTTTGA+TGG - tig0024090:41153-41172 Msa1414130:intron 25.0%
! AATAAGGTTATGGAAGTTAA+AGG - tig0024090:41255-41274 Msa1414130:intron 25.0%
!! GAAGTTTATGATGGAAAATT+TGG - tig0024090:41282-41301 Msa1414130:intron 25.0%
! AAAAAGAGAATTGAGAATGA+TGG - tig0024090:41414-41433 Msa1414130:intron 25.0%
! TGTTAATGTTGAAAATGTTG+AGG - tig0024090:41614-41633 Msa1414130:intron 25.0%
!!! ACACTTTAAGATACTTACAA+TGG + tig0024090:41688-41707 None:intergenic 25.0%
! AAGATAATGATTAAAGACCA+AGG + tig0024090:42117-42136 None:intergenic 25.0%
!! CTTAAATATGCATTGATGTT+TGG - tig0024090:42360-42379 Msa1414130:intron 25.0%
! TACTATAGTTCAAACTTAAC+AGG - tig0024090:42538-42557 Msa1414130:intron 25.0%
! TTGAGTATAATCAAGTGTAA+TGG + tig0024090:42801-42820 None:intergenic 25.0%
!!! AATTTTGATTGGTTCTGATT+AGG + tig0024090:42920-42939 None:intergenic 25.0%
! GATAAAATTGCAGGAAAATT+TGG + tig0024090:43013-43032 None:intergenic 25.0%
! AATAACAATGGAAATATCAC+AGG - tig0024090:43130-43149 Msa1414130:CDS 25.0%
TCCCTTTCCTAGTTAATATT+AGG - tig0024090:38268-38287 Msa1414130:CDS 30.0%
GACCTAATATTAACTAGGAA+AGG + tig0024090:38273-38292 None:intergenic 30.0%
CTTGTTTCATTAGATGAGAT+TGG + tig0024090:38318-38337 None:intergenic 30.0%
ACTATGAATATGATCCTTGT+CGG + tig0024090:38406-38425 None:intergenic 30.0%
TAGTGATACATCATCTTTGT+TGG - tig0024090:38422-38441 Msa1414130:CDS 30.0%
AGATTGATCACTACTAGTAT+TGG + tig0024090:38645-38664 None:intergenic 30.0%
TAGTAGTGATCAATCTATGA+TGG - tig0024090:38649-38668 Msa1414130:CDS 30.0%
!! TGTCTATATTTGATAATGCC+TGG - tig0024090:38828-38847 Msa1414130:intron 30.0%
ATTCACGTAGACAACAATAT+GGG - tig0024090:38884-38903 Msa1414130:intron 30.0%
GTTAAAATAAAGGGGAGAAA+TGG + tig0024090:39122-39141 None:intergenic 30.0%
CATCCAATGATATGTTATCA+CGG - tig0024090:39215-39234 Msa1414130:intron 30.0%
TTACCGTGATAACATATCAT+TGG + tig0024090:39221-39240 None:intergenic 30.0%
TTGTATTTAATCCTGAGTCA+GGG + tig0024090:39502-39521 None:intergenic 30.0%
TTTGTATTTAATCCTGAGTC+AGG + tig0024090:39503-39522 None:intergenic 30.0%
!!! AACAGATTTTTTTAACGGCA+GGG + tig0024090:39563-39582 None:intergenic 30.0%
!!! TAACAGATTTTTTTAACGGC+AGG + tig0024090:39564-39583 None:intergenic 30.0%
! AAATCTGTTAAGTGATGATG+TGG - tig0024090:39574-39593 Msa1414130:intron 30.0%
!!! GGATATTGATTTTCGATTCA+GGG + tig0024090:40298-40317 None:intergenic 30.0%
!!! AGGATATTGATTTTCGATTC+AGG + tig0024090:40297-40316 None:intergenic 30.0%
ACAGTAAGTATACACAATCA+GGG + tig0024090:39778-39797 None:intergenic 30.0%
CTAATTTCGTGTTTACTATC+AGG + tig0024090:39811-39830 None:intergenic 30.0%
CTGATAGTAAACACGAAATT+AGG - tig0024090:39809-39828 Msa1414130:CDS 30.0%
GATAGTAAACACGAAATTAG+GGG - tig0024090:39811-39830 Msa1414130:CDS 30.0%
CGAAATTTCACTAAGATCTT+TGG + tig0024090:40214-40233 None:intergenic 30.0%
GAAATTTCGTGTTTAATGTC+AGG - tig0024090:40225-40244 Msa1414130:CDS 30.0%
!!! AGGATATTGATTTTCGATTC+AGG - tig0024090:40297-40316 Msa1414130:CDS 30.0%
!!! GGATATTGATTTTCGATTCA+GGG - tig0024090:40298-40317 Msa1414130:CDS 30.0%
!!! AGGATATTGATTTTCGATTC+AGG - tig0024090:40297-40316 Msa1414130:CDS 30.0%
!!! GGATATTGATTTTCGATTCA+GGG - tig0024090:40298-40317 Msa1414130:CDS 30.0%
CCAGAAAATTTGAGTAGTAA+GGG + tig0024090:40624-40643 None:intergenic 30.0%
! CCTTACTACTCAAATTTTCT+GGG - tig0024090:40622-40641 Msa1414130:intron 30.0%
TTTCTGTCCATATCATATAG+GGG + tig0024090:40658-40677 None:intergenic 30.0%
GTTTCTGTCCATATCATATA+GGG + tig0024090:40659-40678 None:intergenic 30.0%
! TGTTTCTGTCCATATCATAT+AGG + tig0024090:40660-40679 None:intergenic 30.0%
AGAACACTATTAACATGATG+GGG - tig0024090:40840-40859 Msa1414130:intron 30.0%
TCAGCAAAAACAAAATGCAT+TGG + tig0024090:40867-40886 None:intergenic 30.0%
! TTCATTGAACTGTTTTCAGA+TGG - tig0024090:40990-41009 Msa1414130:intron 30.0%
AGATTACAATTACATGCGAA+TGG - tig0024090:41089-41108 Msa1414130:intron 30.0%
GAGAAAAAAATAGCTGAGAA+TGG - tig0024090:41186-41205 Msa1414130:intron 30.0%
AAAAAAATAGCTGAGAATGG+TGG - tig0024090:41189-41208 Msa1414130:intron 30.0%
ATCAGCTACTAATAAGGTTA+TGG - tig0024090:41245-41264 Msa1414130:intron 30.0%
AAAGGACAAGAAGTTTATGA+TGG - tig0024090:41273-41292 Msa1414130:intron 30.0%
GAGAAAAAGAGAATGAAGAA+TGG - tig0024090:41306-41325 Msa1414130:intron 30.0%
AAAAAGAGAATGAAGAATGG+TGG - tig0024090:41309-41328 Msa1414130:intron 30.0%
!! AAAAGGAAATTTGTTGATGC+TGG - tig0024090:41342-41361 Msa1414130:intron 30.0%
!! AAAGGAAATTTGTTGATGCT+GGG - tig0024090:41343-41362 Msa1414130:intron 30.0%
!! AAGGTCAAAGAAGTGTTTAA+TGG - tig0024090:41378-41397 Msa1414130:intron 30.0%
! TATAGGTTTTCTCATTGATG+AGG + tig0024090:41517-41536 None:intergenic 30.0%
CCTAACTGATCTTTACTTAT+AGG + tig0024090:41534-41553 None:intergenic 30.0%
CCTATAAGTAAAGATCAGTT+AGG - tig0024090:41531-41550 Msa1414130:intron 30.0%
TAACATCCTCATTCTTACTT+AGG + tig0024090:41599-41618 None:intergenic 30.0%
TTATTGTGTTAGATCACTGA+TGG - tig0024090:41778-41797 Msa1414130:intron 30.0%
!! GATAATACGCTTTAGGAAAT+GGG + tig0024090:41846-41865 None:intergenic 30.0%
! AGAAGAAAGTTACCTGTTTT+CGG + tig0024090:41897-41916 None:intergenic 30.0%
TAATGCGAAAGCAATCATTA+AGG + tig0024090:41968-41987 None:intergenic 30.0%
!!! ACATGCATATTTTAAGACCT+TGG - tig0024090:42097-42116 Msa1414130:intron 30.0%
AATTTGATATACATTGCACG+AGG - tig0024090:42200-42219 Msa1414130:intron 30.0%
! CATGTTTCTATGCTAGAAAA+TGG - tig0024090:42271-42290 Msa1414130:intron 30.0%
! TCTATGCTAGAAAATGGATT+TGG - tig0024090:42277-42296 Msa1414130:intron 30.0%
CAACAAACTCAAATCCAAAA+TGG - tig0024090:42450-42469 Msa1414130:intron 30.0%
!!! GTATTTTAACTAACCTAGCT+AGG + tig0024090:42482-42501 None:intergenic 30.0%
TTCAAACTTAACAGGTACAA+AGG - tig0024090:42546-42565 Msa1414130:intron 30.0%
!!! AGTTGTTTTTGCCATTTCTT+TGG + tig0024090:42642-42661 None:intergenic 30.0%
AATACTTGAAGAACAAGGAA+GGG + tig0024090:42747-42766 None:intergenic 30.0%
GTATAATCAAGTGTAATGGT+TGG + tig0024090:42797-42816 None:intergenic 30.0%
!! AAGGGACACAAAATTTTGAT+TGG + tig0024090:42931-42950 None:intergenic 30.0%
!! AAAATTTGGATTAGCAGCAA+TGG + tig0024090:42999-43018 None:intergenic 30.0%
TGGAGGACCTAATATTAACT+AGG + tig0024090:38278-38297 None:intergenic 35.0%
TTCATTAGATGAGATTGGAG+AGG + tig0024090:38313-38332 None:intergenic 35.0%
TATGAATATGATCCTTGTCG+GGG + tig0024090:38404-38423 None:intergenic 35.0%
CTATGAATATGATCCTTGTC+GGG + tig0024090:38405-38424 None:intergenic 35.0%
! GTATTGGTAGTAACAGGATT+GGG + tig0024090:38629-38648 None:intergenic 35.0%
!! AGTATTGGTAGTAACAGGAT+TGG + tig0024090:38630-38649 None:intergenic 35.0%
!! CTACTAGTATTGGTAGTAAC+AGG + tig0024090:38635-38654 None:intergenic 35.0%
GTTCTCTTGTCTTCTGAATT+AGG + tig0024090:38689-38708 None:intergenic 35.0%
AGAAGACAAGAGAACTAAGA+GGG - tig0024090:38694-38713 Msa1414130:CDS 35.0%
GATTCACGTAGACAACAATA+TGG - tig0024090:38883-38902 Msa1414130:intron 35.0%
CGTGATAACATATCATTGGA+TGG + tig0024090:39217-39236 None:intergenic 35.0%
TTGATGTAGCAACACATCAT+TGG - tig0024090:39281-39300 Msa1414130:intron 35.0%
AGGGATCTAACAGTAAATTG+AGG + tig0024090:40349-40368 None:intergenic 35.0%
ACAGTAAGTATACACAGTCA+GGG + tig0024090:39706-39725 None:intergenic 35.0%
GTGTATACTTACTGTCAGTT+AGG - tig0024090:39711-39730 Msa1414130:CDS 35.0%
GACAGTAAGTATACACAATC+AGG + tig0024090:39779-39798 None:intergenic 35.0%
! ATGCTACTTACTCAACACTA+AGG + tig0024090:40174-40193 None:intergenic 35.0%
GTGTGTACTTACTATCAGTT+AGG + tig0024090:40253-40272 None:intergenic 35.0%
ATAGTAAGTACACACAGTCA+GGG - tig0024090:40258-40277 Msa1414130:CDS 35.0%
AGGGATCTAACAGTAAATTG+AGG - tig0024090:40349-40368 Msa1414130:intron 35.0%
! CCCTTACTACTCAAATTTTC+TGG - tig0024090:40621-40640 Msa1414130:intron 35.0%
CCCAGAAAATTTGAGTAGTA+AGG + tig0024090:40625-40644 None:intergenic 35.0%
ATATCATATAGGGGCAATGA+CGG + tig0024090:40649-40668 None:intergenic 35.0%
ACTGACATACACATAAACAC+TGG + tig0024090:40722-40741 None:intergenic 35.0%
!! ACGTTTTATTCGCATGTGAT+GGG - tig0024090:40933-40952 Msa1414130:intron 35.0%
TTTCAGATGGCTATTCTTCA+AGG - tig0024090:41003-41022 Msa1414130:intron 35.0%
GAAAGTGATGCAAGATTGTA+AGG - tig0024090:41119-41138 Msa1414130:intron 35.0%
GATGCAAGATTGTAAGGTTA+AGG - tig0024090:41125-41144 Msa1414130:intron 35.0%
TGTAAGGTTAAGGAAGTCAA+AGG - tig0024090:41135-41154 Msa1414130:intron 35.0%
! CCAAGATCCATAATTTTCCT+TGG + tig0024090:41225-41244 None:intergenic 35.0%
CCAAGGAAAATTATGGATCT+TGG - tig0024090:41222-41241 Msa1414130:intron 35.0%
TCTTGGATCAGCTACTAATA+AGG - tig0024090:41239-41258 Msa1414130:intron 35.0%
! ATGGTGGAGAATTAGTGAAA+AGG - tig0024090:41325-41344 Msa1414130:intron 35.0%
! AATTGAGAATGATGGAGAGT+TGG - tig0024090:41422-41441 Msa1414130:intron 35.0%
GTTAGTCCTAAGTAAGAATG+AGG - tig0024090:41590-41609 Msa1414130:intron 35.0%
!! CGATAATACGCTTTAGGAAA+TGG + tig0024090:41847-41866 None:intergenic 35.0%
!! AGAAACATGAGCTTTGAAAG+TGG + tig0024090:42260-42279 None:intergenic 35.0%
! TAAATGCATGGATTGCAGAA+TGG + tig0024090:42310-42329 None:intergenic 35.0%
GTTGTCATCACAACATATGA+AGG - tig0024090:42587-42606 Msa1414130:intron 35.0%
ACATCAACAACAAGCAATGA+TGG - tig0024090:42689-42708 Msa1414130:CDS 35.0%
ATACTTGAAGAACAAGGAAG+GGG + tig0024090:42746-42765 None:intergenic 35.0%
CAATACTTGAAGAACAAGGA+AGG + tig0024090:42748-42767 None:intergenic 35.0%
GTTGCAATACTTGAAGAACA+AGG + tig0024090:42752-42771 None:intergenic 35.0%
AAGTGTAATGGTTGGAAATG+GGG + tig0024090:42789-42808 None:intergenic 35.0%
CAAGTGTAATGGTTGGAAAT+GGG + tig0024090:42790-42809 None:intergenic 35.0%
TCAAGTGTAATGGTTGGAAA+TGG + tig0024090:42791-42810 None:intergenic 35.0%
! AAGGAGTTTGAAACTGATCT+GGG + tig0024090:42847-42866 None:intergenic 35.0%
! AAAGGAGTTTGAAACTGATC+TGG + tig0024090:42848-42867 None:intergenic 35.0%
TTGTGTCCCTTCAAAACTAT+TGG - tig0024090:42940-42959 Msa1414130:CDS 35.0%
!!! GAACTGCCAATAGTTTTGAA+GGG + tig0024090:42949-42968 None:intergenic 35.0%
AGAGTAGCTGATAAAATTGC+AGG + tig0024090:43022-43041 None:intergenic 35.0%
GTCGCAAAAGGTAATAACAA+TGG - tig0024090:43118-43137 Msa1414130:CDS 35.0%
TGGGACTAAGTTTCAACTCA+AGG + tig0024090:38218-38237 None:intergenic 40.0%
ACTTAGTCCCAACGAAAACA+TGG - tig0024090:38227-38246 Msa1414130:CDS 40.0%
! GTAGCATCCATGTTTTCGTT+GGG + tig0024090:38237-38256 None:intergenic 40.0%
! TGTAGCATCCATGTTTTCGT+TGG + tig0024090:38238-38257 None:intergenic 40.0%
!!! AGAGGTTTGGTTTTCATTGG+AGG + tig0024090:38295-38314 None:intergenic 40.0%
!!! TGGAGAGGTTTGGTTTTCAT+TGG + tig0024090:38298-38317 None:intergenic 40.0%
TAGATGAGATTGGAGAGGTT+TGG + tig0024090:38308-38327 None:intergenic 40.0%
CAGAAGACAAGAGAACTAAG+AGG - tig0024090:38693-38712 Msa1414130:CDS 40.0%
ATTCGAGTGTCACACGTTAA+CGG + tig0024090:38856-38875 None:intergenic 40.0%
TTAACGTGTGACACTCGAAT+AGG - tig0024090:38856-38875 Msa1414130:intron 40.0%
TAACGTGTGACACTCGAATA+GGG - tig0024090:38857-38876 Msa1414130:intron 40.0%
! TAAAATGGAAGTGAGGGCAT+TGG + tig0024090:38910-38929 None:intergenic 40.0%
!! GTTGGTTTGGTTTGTAGCTT+TGG - tig0024090:39024-39043 Msa1414130:intron 40.0%
GGAGAAATGGATGACACTAA+TGG + tig0024090:39109-39128 None:intergenic 40.0%
! CAAATAGTCACTTTAGTCCC+TGG - tig0024090:39451-39470 Msa1414130:intron 40.0%
! ATAACGGAAGTGTAGAGTCA+GGG + tig0024090:40504-40523 None:intergenic 40.0%
GACAGTAAGTATACACAGTC+AGG + tig0024090:39707-39726 None:intergenic 40.0%
GTGTATACTTACTGTCAGTC+AGG - tig0024090:39783-39802 Msa1414130:CDS 40.0%
ATCTTTCATGCCAACTCCAA+GGG - tig0024090:39876-39895 Msa1414130:CDS 40.0%
! AAACATCACATAGTTGGCCT+CGG + tig0024090:39904-39923 None:intergenic 40.0%
GATAGTAAGTACACACAGTC+AGG - tig0024090:40257-40276 Msa1414130:CDS 40.0%
AGGGACCTAACAGTAAATTG+AGG - tig0024090:40277-40296 Msa1414130:CDS 40.0%
GTGTGTACTTACTGTCAGTT+AGG + tig0024090:40325-40344 None:intergenic 40.0%
ACAGTAAGTACACACAGTCA+GGG - tig0024090:40330-40349 Msa1414130:CDS 40.0%
GGCAAGGACTAAAGTGATAA+CGG - tig0024090:40488-40507 Msa1414130:intron 40.0%
! ATAACGGAAGTGTAGAGTCA+GGG - tig0024090:40504-40523 Msa1414130:intron 40.0%
TATCATATAGGGGCAATGAC+GGG + tig0024090:40648-40667 None:intergenic 40.0%
GTCATTGCCCCTATATGATA+TGG - tig0024090:40648-40667 Msa1414130:intron 40.0%
CATGCGAATAAAACGTGTCA+GGG + tig0024090:40929-40948 None:intergenic 40.0%
ACATGCGAATAAAACGTGTC+AGG + tig0024090:40930-40949 None:intergenic 40.0%
!! CACGTTTTATTCGCATGTGA+TGG - tig0024090:40932-40951 Msa1414130:intron 40.0%
! ACTGGTGCCAAGGAAAATTA+TGG - tig0024090:41215-41234 Msa1414130:intron 40.0%
!! GAAATTTGTTGATGCTGGGT+TGG - tig0024090:41347-41366 Msa1414130:intron 40.0%
TACTAATGCTGAGACTGTGA+TGG - tig0024090:41476-41495 Msa1414130:intron 40.0%
! AGATCACTGATGGATGTCAA+TGG - tig0024090:41788-41807 Msa1414130:intron 40.0%
GGATGTCAATGGAGAAAGTA+TGG - tig0024090:41799-41818 Msa1414130:intron 40.0%
CTGCAACGATAATACGCTTT+AGG + tig0024090:41853-41872 None:intergenic 40.0%
TTTAATGGCCATCAACGTAC+TGG + tig0024090:42338-42357 None:intergenic 40.0%
ATGGTCGTTGTATCGAAGAT+TGG + tig0024090:42391-42410 None:intergenic 40.0%
CCATATAGTAAGTACGTCGA+TGG + tig0024090:42410-42429 None:intergenic 40.0%
CCATCGACGTACTTACTATA+TGG - tig0024090:42407-42426 Msa1414130:intron 40.0%
! TAGCTAGGTAGCTACCATTT+TGG + tig0024090:42467-42486 None:intergenic 40.0%
AAAATGGTAGCTACCTAGCT+AGG - tig0024090:42466-42485 Msa1414130:intron 40.0%
AATCTCCAACTACTCCACAA+AGG - tig0024090:42819-42838 Msa1414130:intron 40.0%
AGGAATTTGCAGAAGTCTGA+CGG + tig0024090:42874-42893 None:intergenic 40.0%
!!! GGAACTGCCAATAGTTTTGA+AGG + tig0024090:42950-42969 None:intergenic 40.0%
TGGCAGTTCCAAATATTGCT+CGG - tig0024090:42960-42979 Msa1414130:CDS 40.0%
GCTACTCTTACTTCCATGAT+TGG - tig0024090:43034-43053 Msa1414130:CDS 40.0%
AATGGGAACAATGTCGCAAA+AGG - tig0024090:43106-43125 Msa1414130:CDS 40.0%
ACAGGTAGCAACAACAAAGA+TGG - tig0024090:43148-43167 Msa1414130:CDS 40.0%
CAGGTAGCAACAACAAAGAT+GGG - tig0024090:43149-43168 Msa1414130:CDS 40.0%
TAGCAACAACAAAGATGGGA+AGG - tig0024090:43153-43172 Msa1414130:CDS 40.0%
AGGCAGAGACAACTTCTTGA+TGG + tig0024090:38377-38396 None:intergenic 45.0%
AGACAAGAGAACTAAGAGGG+AGG - tig0024090:38697-38716 Msa1414130:CDS 45.0%
TTCGAGTGTCACACGTTAAC+GGG + tig0024090:38855-38874 None:intergenic 45.0%
!! GATAACGGAAGTGTAGAGTC+AGG + tig0024090:40503-40522 None:intergenic 45.0%
GGCAGGGACTAAAGTGATAA+CGG + tig0024090:39547-39566 None:intergenic 45.0%
! AAGGAGTATGACGTGTCACA+GGG - tig0024090:39606-39625 Msa1414130:intron 45.0%
GTCACAGGGACTAAAGTGAA+AGG - tig0024090:39620-39639 Msa1414130:intron 45.0%
CATCTTTCATGCCAACTCCA+AGG - tig0024090:39875-39894 Msa1414130:CDS 45.0%
GACAGTAAGTACACACAGTC+AGG - tig0024090:40329-40348 Msa1414130:CDS 45.0%
!! GATAACGGAAGTGTAGAGTC+AGG - tig0024090:40503-40522 Msa1414130:intron 45.0%
!! TGCTGGGTTGGCTACTAATA+AGG - tig0024090:41359-41378 Msa1414130:intron 45.0%
!! ATGATGGAGAGTTGGTGCAA+AGG - tig0024090:41430-41449 Msa1414130:intron 45.0%
! AGTTGGTGCAAAGGCAATGT+AGG - tig0024090:41439-41458 Msa1414130:intron 45.0%
GTTGGTGCAAAGGCAATGTA+GGG - tig0024090:41440-41459 Msa1414130:intron 45.0%
! ATCAGCGTTGAAAAGCTTCG+AGG - tig0024090:41554-41573 Msa1414130:intron 45.0%
AGCGTATTATCGTTGCAGCA+TGG - tig0024090:41855-41874 Msa1414130:intron 45.0%
AACTGATCTGGGTTCCTTTG+TGG + tig0024090:42836-42855 None:intergenic 45.0%
GCAGAAGTCTGACGGTTTAA+AGG + tig0024090:42866-42885 None:intergenic 45.0%
TTGAGAGATCAGAGAAGCTG+AGG + tig0024090:42894-42913 None:intergenic 45.0%
GGCAGTTCCAAATATTGCTC+GGG - tig0024090:42961-42980 Msa1414130:CDS 45.0%
TTGACTGCCCGAGCAATATT+TGG + tig0024090:42971-42990 None:intergenic 45.0%
TGGCTGAGTATCACCAATCA+TGG + tig0024090:43050-43069 None:intergenic 45.0%
! GTAGCAGCAGTAGTGTTGTT+TGG + tig0024090:43070-43089 None:intergenic 45.0%
!!! ATATATATATATAATTTTCT+TGG - tig0024090:39002-39021 Msa1414130:intron 5.0%
!! TAAAATATATGTATTTATTA+TGG - tig0024090:41926-41945 Msa1414130:intron 5.0%
GTGTGACACTCGAATAGGGA+TGG - tig0024090:38861-38880 Msa1414130:intron 50.0%
! CAAGGAGTATGACGTGTCAC+AGG - tig0024090:39605-39624 Msa1414130:intron 50.0%
AAGGAGGATGACGTGTCACA+GGG + tig0024090:40429-40448 None:intergenic 50.0%
GATGATGTGGCATGCTGACA+AGG + tig0024090:40448-40467 None:intergenic 50.0%
TTTGCACCTCGCTGTCACAT+AGG + tig0024090:40560-40579 None:intergenic 50.0%
! AGCTGAGAATGGTGGAGTAC+TGG - tig0024090:41197-41216 Msa1414130:intron 50.0%
! AGCGTTGAAAAGCTTCGAGG+AGG - tig0024090:41557-41576 Msa1414130:intron 50.0%
! AAGCTTCGAGGAGGCTTTGA+AGG - tig0024090:41566-41585 Msa1414130:intron 50.0%
! TTTTCGGACTGAGCAACCAC+GGG + tig0024090:41881-41900 None:intergenic 50.0%
! GTTTTCGGACTGAGCAACCA+CGG + tig0024090:41882-41901 None:intergenic 50.0%
TGGTTGCTCAGTCCGAAAAC+AGG - tig0024090:41882-41901 Msa1414130:intron 50.0%
CATGTCTGTGACTGCGATGT+AGG + tig0024090:42082-42101 None:intergenic 50.0%
!! GTACTGGCTGCGTAAATGCA+TGG + tig0024090:42322-42341 None:intergenic 50.0%
TTACGCAGCCAGTACGTTGA+TGG - tig0024090:42327-42346 Msa1414130:intron 50.0%
CTTTGGCTGCTGCAGGTAAA+GGG + tig0024090:42625-42644 None:intergenic 50.0%
TCTTTGGCTGCTGCAGGTAA+AGG + tig0024090:42626-42645 None:intergenic 50.0%
ACCTGCAGCAGCCAAAGAAA+TGG - tig0024090:42628-42647 Msa1414130:intron 50.0%
GGGTTCCTTTGTGGAGTAGT+TGG + tig0024090:42827-42846 None:intergenic 50.0%
ATGATCCTTGTCGGGGACAG+AGG + tig0024090:38397-38416 None:intergenic 55.0%
! TGTCACACGTTAACGGGTCC+AGG + tig0024090:38849-38868 None:intergenic 55.0%
TCCTGAGTCAGGGACCTATG+TGG + tig0024090:39492-39511 None:intergenic 55.0%
GATGATGTGGCACGCTGACA+AGG - tig0024090:39587-39606 Msa1414130:intron 55.0%
! ATAGTTGGCCTCGGAACCCT+TGG + tig0024090:39895-39914 None:intergenic 55.0%
CAAGGAGGATGACGTGTCAC+AGG + tig0024090:40430-40449 None:intergenic 55.0%
GATGTGGCATGCTGACAAGG+AGG + tig0024090:40445-40464 None:intergenic 55.0%
TGACAGCGAGGTGCAAAGTC+AGG - tig0024090:40563-40582 Msa1414130:intron 55.0%
GACAGCGAGGTGCAAAGTCA+GGG - tig0024090:40564-40583 Msa1414130:intron 55.0%
!! ATGGTGGAGTACTGGTGCCA+AGG - tig0024090:41205-41224 Msa1414130:intron 55.0%
GCCATTTCTTTGGCTGCTGC+AGG + tig0024090:42632-42651 None:intergenic 55.0%
TCTGCACCTCGCTGCCACAT+AGG - tig0024090:39475-39494 Msa1414130:CDS 60.0%
GCCACATAGGTCCCTGACTC+AGG - tig0024090:39488-39507 Msa1414130:CDS 60.0%
TGCCAACTCCAAGGGTTCCG+AGG - tig0024090:39884-39903 Msa1414130:CDS 60.0%
CAGGGACCTATGTGACAGCG+AGG - tig0024090:40551-40570 Msa1414130:intron 60.0%
TATCGTTGCAGCATGGCCCG+TGG - tig0024090:41862-41881 Msa1414130:intron 60.0%
TGGCTGCTGCAGGTAAAGGG+TGG + tig0024090:42622-42641 None:intergenic 60.0%
CTCTGCCTCTGTCCCCGACA+AGG - tig0024090:38389-38408 Msa1414130:CDS 65.0%
CAGGGACCTATGTGGCAGCG+AGG + tig0024090:39484-39503 None:intergenic 65.0%
GGCCTCGGAACCCTTGGAGT+TGG + tig0024090:39889-39908 None:intergenic 65.0%
GGCAGCGAGGTGCAGAGCCA+GGG + tig0024090:39471-39490 None:intergenic 70.0%
TGGCAGCGAGGTGCAGAGCC+AGG + tig0024090:39472-39491 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0024090 gene 38189 43180 38189 ID=Msa1414130;Name=Msa1414130
tig0024090 mRNA 38189 43180 38189 ID=Msa1414130-mRNA-1;Parent=Msa1414130;Name=Msa1414130-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|5|0|594
tig0024090 exon 42911 43180 42911 ID=Msa1414130-mRNA-1:exon:21603;Parent=Msa1414130-mRNA-1
tig0024090 exon 42651 42749 42651 ID=Msa1414130-mRNA-1:exon:21602;Parent=Msa1414130-mRNA-1
tig0024090 exon 39680 40360 39680 ID=Msa1414130-mRNA-1:exon:21601;Parent=Msa1414130-mRNA-1
tig0024090 exon 39466 39579 39466 ID=Msa1414130-mRNA-1:exon:21600;Parent=Msa1414130-mRNA-1
tig0024090 exon 38189 38809 38189 ID=Msa1414130-mRNA-1:exon:21599;Parent=Msa1414130-mRNA-1
tig0024090 CDS 42911 43180 42911 ID=Msa1414130-mRNA-1:cds;Parent=Msa1414130-mRNA-1
tig0024090 CDS 42651 42749 42651 ID=Msa1414130-mRNA-1:cds;Parent=Msa1414130-mRNA-1
tig0024090 CDS 39680 40360 39680 ID=Msa1414130-mRNA-1:cds;Parent=Msa1414130-mRNA-1
tig0024090 CDS 39466 39579 39466 ID=Msa1414130-mRNA-1:cds;Parent=Msa1414130-mRNA-1
tig0024090 CDS 38189 38809 38189 ID=Msa1414130-mRNA-1:cds;Parent=Msa1414130-mRNA-1
Gene Sequence

>Msa1414130

ATGGATTCAAATCCAGTTAATATTAACCTTGAGTTGAAACTTAGTCCCAACGAAAACATGGATGCTACACATAGTACTATCCCTTTCCTAGTTAATATTAGGTCCTCCAATGAAAACCAAACCTCTCCAATCTCATCTAATGAAACAAGAATAGAGTTTGATTTCTTTAAGGACAACAACAATGACCATCAAGAAGTTGTCTCTGCCTCTGTCCCCGACAAGGATCATATTCATAGTGATACATCATCTTTGTTGGAACTCAAGCTGAGTCTTGGTCCCAATCCTGTTACTACCAATACTAGTAGTGATCAATCTATGATGGATGACGACATGTCACCTAATTCAGAAGACAAGAGAACTAAGAGGGAGATGGCTATTCTTCAAGGCGAGCTTAAACGAAAGAAAACAGAGAACTGTAGATTAAAATTGATATATGATCAGCTTAAAACAGATTACAATTACATGCGAATGGATTTCGAGAAAGTGATGCAAGATTGTAAGGTTAAGGAAGTCAAAGGAAAAGAAGTTTTTGATGGAAAAATTAAAGAGAAAAAAATAGCTGAGAATGGTGGAGTACTGGTGCCAAGGAAAATTATGGATCTTGGATCAGCTACTAATAAGGTTATGGAAGTTAAAGGACAAGAAGTTTATGATGGAAAATTTGGTGAGAAAAAGAGAATGAAGAATGGTGGAGAATTAGTGAAAAGGAAATTTGTTGATGCTGGGTTGGCTACTAATAAGGTCAAAGAAGTGTTTAATGGTAAATGTGAAAAGAAAAAGAGAATTGAGAATGATGGAGAGTTGGTGCAAAGGCAATGTAGGGATCTTGTGTTGATTACTAATGCTGAGACTGTGATGGATCATGAAGCTTCTTCCTCATCAATGAGAAAACCTATAAGTAAAGATCAGTTAGGATCAGCGTTGAAAAGCTTCGAGGAGGCTTTGAAGGAGTTAGTCCTAAGTAAGAATGAGGATGTTAATGTTGAAAATGTTGAGGCTACATTGACAAAAGCAAGAGTTACTATTAGAGCTAGATCAGAAGAAACCATTATCACTGATGGATGTCAATGGAGAAAGTATGGACAGAAACTGTCGAAAAGAAACCCATTTCCTAAAGCGTATTATCGTTGCAGCATGGCCCGTGGTTGCTCAGTCCGAAAACAGGTACAAAGGTGTGCTCTTGACAGAGCAGTTGTCATCACAACATATGAAGGAAATCACAACCACCCTTTACCTGCAGCAGCCAAAGAAATGGCAAAAACAACTTCTACAGCTGCAAAGATGCTTCTTTCAACATCAACAACAAGCAATGATGGACAATTGAATGCAAATTTACTCAGAAGAACACCCCTTCCTTGTTCTTCAAGTATTGCAACTATCTCAACTTCTGCCCCATTTCCAACCATTACACTTGATTATACTCAATCTCCAACTACTCCACAAAGGAACCCAGATCAGTTTCAAACTCCTTTAAACCGTCAGACTTCTGCAAATTCCTCAGCTTCTCTGATCTCTCAAACACCTAATCAGAACCAATCAAAATTTTGTGTCCCTTCAAAACTATTGGCAGTTCCAAATATTGCTCGGGCAGTCAACGCTGCCATTGCTGCTAATCCAAATTTTCCTGCAATTTTATCAGCTACTCTTACTTCCATGATTGGTGATACTCAGCCAAACAACACTACTGCTGCTACTGATAATAATAATAATAATGGGAACAATGTCGCAAAAGGTAATAACAATGGAAATATCACAGGTAGCAACAACAAAGATGGGAAGGAATAA
Protein sequence

>Msa1414130

MDSNPVNINLELKLSPNENMDATHSTIPFLVNIRSSNENQTSPISSNETRIEFDFFKDNNNDHQEVVSASVPDKDHIHSDTSSLLELKLSLGPNPVTTNTSSDQSMMDDDMSPNSEDKRTKREMAILQGELKRKKTENCRLKLIYDQLKTDYNYMRMDFEKVMQDCKVKEVKGKEVFDGKIKEKKIAENGGVLVPRKIMDLGSATNKVMEVKGQEVYDGKFGEKKRMKNGGELVKRKFVDAGLATNKVKEVFNGKCEKKKRIENDGELVQRQCRDLVLITNAETVMDHEASSSSMRKPISKDQLGSALKSFEEALKELVLSKNEDVNVENVEATLTKARVTIRARSEETIITDGCQWRKYGQKLSKRNPFPKAYYRCSMARGCSVRKQVQRCALDRAVVITTYEGNHNHPLPAAAKEMAKTTSTAAKMLLSTSTTSNDGQLNANLLRRTPLPCSSSIATISTSAPFPTITLDYTQSPTTPQRNPDQFQTPLNRQTSANSSASLISQTPNQNQSKFCVPSKLLAVPNIARAVNAAIAANPNFPAILSATLTSMIGDTQPNNTTAATDNNNNNGNNVAKGNNNGNITGSNNKDGKE*