Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1414600 | sp|Q9SWG3|FAR1_ARATH | 31.498 | 781 | 471 | 16 | 39 | 784 | 48 | 799 | 4.13e-126 | 401 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1414600 | A0A2Z6P9Q3 | 69.127 | 813 | 221 | 7 | 7 | 805 | 29 | 825 | 0.0 | 1179 |
Gene ID | Type | Classification |
---|---|---|
Msa1414600 | TF | FAR1 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1414600 | MtrunA17_Chr2g0296781 | 72.829 | 714 | 181 | 4 | 48 | 749 | 3 | 715 | 0.0 | 1091 |
Msa1414600 | MtrunA17_Chr6g0477261 | 71.406 | 647 | 162 | 5 | 157 | 781 | 1 | 646 | 0.0 | 955 |
Msa1414600 | MtrunA17_Chr1g0196541 | 60.261 | 765 | 259 | 6 | 48 | 807 | 3 | 727 | 0.0 | 929 |
Msa1414600 | MtrunA17_Chr5g0441581 | 45.428 | 689 | 348 | 11 | 28 | 703 | 15 | 688 | 0.0 | 591 |
Msa1414600 | MtrunA17_Chr2g0291581 | 38.163 | 566 | 331 | 9 | 42 | 602 | 71 | 622 | 3.57e-126 | 394 |
Msa1414600 | MtrunA17_Chr1g0207551 | 37.326 | 576 | 335 | 7 | 39 | 603 | 31 | 591 | 6.71e-123 | 389 |
Msa1414600 | MtrunA17_Chr2g0329031 | 35.484 | 589 | 347 | 10 | 48 | 627 | 20 | 584 | 6.37e-122 | 384 |
Msa1414600 | MtrunA17_Chr5g0448761 | 36.915 | 577 | 342 | 12 | 39 | 601 | 57 | 625 | 4.59e-120 | 380 |
Msa1414600 | MtrunA17_Chr3g0080351 | 34.876 | 605 | 343 | 9 | 41 | 627 | 75 | 646 | 2.47e-119 | 380 |
Msa1414600 | MtrunA17_Chr1g0202341 | 36.348 | 575 | 339 | 12 | 41 | 602 | 50 | 610 | 2.26e-115 | 365 |
Msa1414600 | MtrunA17_Chr2g0291591 | 35.259 | 502 | 318 | 4 | 18 | 515 | 39 | 537 | 1.76e-102 | 328 |
Msa1414600 | MtrunA17_Chr5g0440451 | 32.800 | 625 | 364 | 17 | 41 | 636 | 42 | 639 | 1.83e-96 | 322 |
Msa1414600 | MtrunA17_Chr8g0363841 | 30.769 | 585 | 367 | 8 | 38 | 601 | 10 | 577 | 1.21e-86 | 289 |
Msa1414600 | MtrunA17_Chr5g0448511 | 36.500 | 400 | 244 | 6 | 199 | 596 | 1 | 392 | 1.46e-86 | 285 |
Msa1414600 | MtrunA17_Chr3g0118611 | 37.232 | 419 | 247 | 7 | 206 | 622 | 113 | 517 | 1.79e-85 | 288 |
Msa1414600 | MtrunA17_Chr2g0287061 | 32.831 | 597 | 321 | 17 | 23 | 599 | 163 | 699 | 6.91e-80 | 273 |
Msa1414600 | MtrunA17_Chr2g0287651 | 29.350 | 569 | 370 | 10 | 48 | 601 | 81 | 632 | 2.29e-79 | 273 |
Msa1414600 | MtrunA17_Chr6g0476441 | 50.865 | 289 | 99 | 5 | 541 | 787 | 1 | 288 | 1.03e-78 | 256 |
Msa1414600 | MtrunA17_Chr1g0198761 | 29.598 | 696 | 426 | 23 | 45 | 707 | 50 | 714 | 4.67e-77 | 265 |
Msa1414600 | MtrunA17_Chr2g0324011 | 29.116 | 577 | 380 | 11 | 39 | 601 | 7 | 568 | 1.21e-76 | 259 |
Msa1414600 | MtrunA17_Chr1g0203051 | 29.068 | 547 | 361 | 12 | 48 | 582 | 85 | 616 | 4.23e-72 | 249 |
Msa1414600 | MtrunA17_Chr2g0276841 | 27.609 | 594 | 356 | 15 | 42 | 598 | 70 | 626 | 3.22e-69 | 242 |
Msa1414600 | MtrunA17_Chr3g0082121 | 30.757 | 621 | 379 | 20 | 1 | 601 | 1 | 590 | 2.91e-66 | 234 |
Msa1414600 | MtrunA17_Chr1g0203721 | 28.498 | 586 | 364 | 14 | 44 | 601 | 65 | 623 | 2.36e-65 | 234 |
Msa1414600 | MtrunA17_Chr6g0458391 | 27.428 | 587 | 387 | 14 | 26 | 601 | 207 | 765 | 6.49e-65 | 231 |
Msa1414600 | MtrunA17_Chr2g0294841 | 25.175 | 715 | 463 | 17 | 42 | 714 | 45 | 729 | 3.27e-57 | 209 |
Msa1414600 | MtrunA17_Chr5g0431001 | 31.469 | 429 | 264 | 11 | 42 | 447 | 61 | 482 | 1.71e-56 | 202 |
Msa1414600 | MtrunA17_Chr2g0290391 | 26.298 | 597 | 387 | 20 | 29 | 599 | 42 | 611 | 5.39e-50 | 187 |
Msa1414600 | MtrunA17_Chr1g0164591 | 34.043 | 329 | 175 | 10 | 120 | 429 | 3 | 308 | 1.13e-47 | 172 |
Msa1414600 | MtrunA17_Chr7g0258861 | 31.818 | 286 | 182 | 5 | 39 | 314 | 7 | 289 | 9.92e-41 | 152 |
Msa1414600 | MtrunA17_Chr6g0476431 | 61.628 | 86 | 33 | 0 | 48 | 133 | 3 | 88 | 1.35e-31 | 118 |
Msa1414600 | MtrunA17_Chr6g0451441 | 32.500 | 200 | 125 | 5 | 10 | 203 | 52 | 247 | 3.15e-21 | 97.8 |
Msa1414600 | MtrunA17_Chr2g0308841 | 27.854 | 219 | 141 | 5 | 386 | 598 | 17 | 224 | 1.26e-16 | 80.9 |
Msa1414600 | MtrunA17_Chr1g0172041 | 31.818 | 110 | 74 | 1 | 515 | 624 | 3 | 111 | 8.73e-15 | 71.2 |
Msa1414600 | MtrunA17_Chr3g0077731 | 46.296 | 108 | 45 | 4 | 654 | 749 | 1 | 107 | 7.29e-13 | 66.2 |
Msa1414600 | MtrunA17_Chr1g0149131 | 29.915 | 117 | 67 | 3 | 316 | 424 | 1 | 110 | 5.57e-12 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1414600 | AT4G15090.1 | 31.498 | 781 | 471 | 16 | 39 | 784 | 48 | 799 | 4.20e-127 | 401 |
Msa1414600 | AT4G15090.5 | 31.498 | 781 | 471 | 16 | 39 | 784 | 48 | 799 | 4.20e-127 | 401 |
Msa1414600 | AT4G15090.3 | 31.498 | 781 | 471 | 16 | 39 | 784 | 48 | 799 | 4.20e-127 | 401 |
Msa1414600 | AT4G15090.2 | 31.498 | 781 | 471 | 16 | 39 | 784 | 48 | 799 | 4.20e-127 | 401 |
Msa1414600 | AT4G15090.4 | 31.498 | 781 | 471 | 16 | 39 | 784 | 48 | 799 | 4.20e-127 | 401 |
Msa1414600 | AT1G76320.3 | 36.585 | 574 | 326 | 12 | 48 | 608 | 3 | 551 | 5.90e-118 | 372 |
Msa1414600 | AT1G76320.2 | 36.585 | 574 | 326 | 12 | 48 | 608 | 3 | 551 | 7.72e-118 | 374 |
Msa1414600 | AT1G76320.1 | 36.585 | 574 | 326 | 12 | 48 | 608 | 3 | 551 | 8.95e-118 | 374 |
Msa1414600 | AT1G76320.4 | 36.585 | 574 | 326 | 12 | 48 | 608 | 3 | 551 | 8.95e-118 | 374 |
Msa1414600 | AT4G38180.1 | 34.732 | 596 | 363 | 10 | 20 | 601 | 51 | 634 | 1.33e-115 | 369 |
Msa1414600 | AT1G52520.1 | 34.077 | 672 | 391 | 17 | 9 | 643 | 37 | 693 | 1.10e-113 | 362 |
Msa1414600 | AT3G22170.2 | 33.849 | 582 | 338 | 6 | 41 | 604 | 69 | 621 | 9.70e-112 | 360 |
Msa1414600 | AT3G22170.1 | 33.849 | 582 | 338 | 6 | 41 | 604 | 69 | 621 | 9.70e-112 | 360 |
Msa1414600 | AT1G80010.1 | 32.582 | 577 | 364 | 13 | 42 | 602 | 95 | 662 | 1.85e-98 | 322 |
Msa1414600 | AT2G32250.5 | 33.989 | 559 | 315 | 9 | 45 | 598 | 41 | 550 | 6.14e-98 | 322 |
Msa1414600 | AT2G32250.6 | 33.989 | 559 | 315 | 9 | 45 | 598 | 41 | 550 | 2.08e-97 | 322 |
Msa1414600 | AT2G32250.1 | 33.989 | 559 | 315 | 9 | 45 | 598 | 41 | 550 | 2.08e-97 | 322 |
Msa1414600 | AT2G32250.3 | 33.989 | 559 | 315 | 9 | 45 | 598 | 41 | 550 | 2.08e-97 | 322 |
Msa1414600 | AT2G32250.7 | 33.993 | 556 | 313 | 9 | 48 | 598 | 3 | 509 | 2.19e-97 | 320 |
Msa1414600 | AT2G32250.8 | 33.993 | 556 | 313 | 9 | 48 | 598 | 3 | 509 | 2.50e-97 | 320 |
Msa1414600 | AT4G19990.3 | 35.149 | 606 | 324 | 16 | 45 | 627 | 24 | 583 | 2.60e-97 | 320 |
Msa1414600 | AT4G19990.4 | 35.149 | 606 | 324 | 16 | 45 | 627 | 24 | 583 | 2.60e-97 | 320 |
Msa1414600 | AT4G19990.5 | 35.149 | 606 | 324 | 16 | 45 | 627 | 24 | 583 | 2.91e-97 | 320 |
Msa1414600 | AT4G19990.7 | 35.149 | 606 | 324 | 16 | 45 | 627 | 38 | 597 | 4.08e-97 | 320 |
Msa1414600 | AT4G19990.6 | 35.149 | 606 | 324 | 16 | 45 | 627 | 24 | 583 | 5.36e-97 | 320 |
Msa1414600 | AT4G19990.2 | 35.149 | 606 | 324 | 16 | 45 | 627 | 24 | 583 | 5.36e-97 | 320 |
Msa1414600 | AT4G19990.1 | 35.551 | 526 | 287 | 11 | 108 | 627 | 47 | 526 | 5.78e-91 | 301 |
Msa1414600 | AT2G27110.2 | 33.049 | 587 | 348 | 14 | 23 | 601 | 30 | 579 | 1.07e-89 | 302 |
Msa1414600 | AT2G27110.1 | 33.049 | 587 | 348 | 14 | 23 | 601 | 30 | 579 | 1.07e-89 | 302 |
Msa1414600 | AT2G32250.2 | 37.760 | 384 | 227 | 4 | 218 | 598 | 176 | 550 | 2.83e-86 | 291 |
Msa1414600 | AT2G32250.4 | 37.760 | 384 | 227 | 4 | 218 | 598 | 176 | 550 | 2.83e-86 | 291 |
Msa1414600 | AT2G27110.3 | 35.535 | 439 | 262 | 9 | 166 | 601 | 14 | 434 | 2.52e-85 | 286 |
Msa1414600 | AT5G18960.2 | 31.041 | 567 | 333 | 15 | 41 | 599 | 210 | 726 | 3.94e-78 | 269 |
Msa1414600 | AT5G18960.1 | 31.041 | 567 | 333 | 15 | 41 | 599 | 210 | 726 | 3.94e-78 | 269 |
Msa1414600 | AT3G06250.2 | 30.796 | 565 | 334 | 13 | 41 | 599 | 189 | 702 | 6.85e-78 | 268 |
Msa1414600 | AT3G06250.1 | 30.796 | 565 | 334 | 13 | 41 | 599 | 189 | 702 | 6.85e-78 | 268 |
Msa1414600 | AT3G06250.3 | 30.796 | 565 | 334 | 13 | 41 | 599 | 189 | 702 | 6.85e-78 | 268 |
Msa1414600 | AT4G38170.1 | 34.684 | 395 | 246 | 6 | 213 | 605 | 19 | 403 | 2.27e-77 | 261 |
Msa1414600 | AT1G10240.2 | 28.525 | 610 | 357 | 20 | 28 | 598 | 35 | 604 | 3.36e-69 | 242 |
Msa1414600 | AT1G10240.1 | 28.525 | 610 | 357 | 20 | 28 | 598 | 35 | 604 | 3.36e-69 | 242 |
Msa1414600 | AT5G28530.3 | 25.763 | 590 | 377 | 14 | 42 | 599 | 55 | 615 | 2.26e-51 | 191 |
Msa1414600 | AT5G28530.2 | 25.763 | 590 | 377 | 14 | 42 | 599 | 55 | 615 | 2.26e-51 | 191 |
Msa1414600 | AT5G28530.1 | 25.763 | 590 | 381 | 14 | 42 | 599 | 55 | 619 | 4.55e-50 | 188 |
Msa1414600 | AT5G28530.5 | 27.019 | 322 | 208 | 7 | 284 | 599 | 252 | 552 | 3.41e-27 | 118 |
Msa1414600 | AT5G28530.4 | 27.019 | 322 | 212 | 7 | 284 | 599 | 252 | 556 | 5.18e-26 | 114 |
Find 108 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGCATTGGTGAATGCTTTC+TGG | 0.174694 | tig0024137:-37591 | None:intergenic |
CAAGAGTTATGCACAATCTA+TGG | 0.188703 | tig0024137:+36286 | Msa1414600:CDS |
TCACTCATAAGTATTGAATT+TGG | 0.202186 | tig0024137:-38595 | None:intergenic |
CACCATCGATGACGAGCTTT+TGG | 0.216625 | tig0024137:-37133 | None:intergenic |
AAGGAAAACAAGGCTGATTT+TGG | 0.221363 | tig0024137:+37514 | Msa1414600:CDS |
ATAGCTTGTATAAGTCATTT+TGG | 0.245260 | tig0024137:+37553 | Msa1414600:CDS |
AATGCATGTATTTCTTTAGA+TGG | 0.249459 | tig0024137:+36461 | Msa1414600:CDS |
CTAAAATAGCGTGCTTTGTC+AGG | 0.272247 | tig0024137:-36533 | None:intergenic |
TATGCACAATCTATGGGTTT+TGG | 0.276171 | tig0024137:+36293 | Msa1414600:CDS |
TTTGAGTAAGAGTGATTTCA+TGG | 0.279123 | tig0024137:+37252 | Msa1414600:CDS |
CCTTTACTTCGAGTCGGTAT+AGG | 0.287148 | tig0024137:-38159 | None:intergenic |
CTTTGTGTTCTAAAGTTAAC+AGG | 0.303944 | tig0024137:+37835 | Msa1414600:CDS |
CATATGTGAGAGACACGTTT+TGG | 0.314193 | tig0024137:+37365 | Msa1414600:CDS |
AGGGCTGCATATGAATATTT+TGG | 0.330794 | tig0024137:+36866 | Msa1414600:CDS |
CTCAAAGTCTTTCTCATTGA+AGG | 0.335766 | tig0024137:-37758 | None:intergenic |
TGATCGGTAATTATGGCATT+TGG | 0.337887 | tig0024137:-37073 | None:intergenic |
ATTTGTTTAAAATGAGGAAT+TGG | 0.340063 | tig0024137:+38040 | Msa1414600:CDS |
TTTGTGGCATATAATGAAAA+AGG | 0.344495 | tig0024137:+37156 | Msa1414600:CDS |
GCCAGGGGATGCTTCTTTAG+AGG | 0.348401 | tig0024137:-38088 | None:intergenic |
TCATACTTGCTTTGAGAGAT+TGG | 0.350261 | tig0024137:+37657 | Msa1414600:CDS |
CTTTACTTCGAGTCGGTATA+GGG | 0.362130 | tig0024137:-38158 | None:intergenic |
TACCTGTAACAATTCAAAAT+AGG | 0.379552 | tig0024137:-38747 | None:intergenic |
TTCATGAATTGAGAATAAAA+TGG | 0.380300 | tig0024137:-38713 | None:intergenic |
GCATGCACTCTAACCATGTT+TGG | 0.393751 | tig0024137:-37039 | None:intergenic |
TCAATAGTTGTTGAAGCAAA+TGG | 0.404794 | tig0024137:+36641 | Msa1414600:CDS |
AAGTGAGGAGACTACGACTT+GGG | 0.414907 | tig0024137:+36714 | Msa1414600:CDS |
AAGGGCGTCCTCCTTCAAAA+AGG | 0.415773 | tig0024137:+38178 | Msa1414600:CDS |
TATTCTCAATTCATGAATCA+TGG | 0.418189 | tig0024137:+38719 | Msa1414600:CDS |
TCATGGCCAATCTGTGTTGT+TGG | 0.420636 | tig0024137:+36967 | Msa1414600:CDS |
ACTTATGAGTGAAGTAAATC+AGG | 0.421958 | tig0024137:+38606 | Msa1414600:CDS |
AATTAAAGATATAGTGTTTG+AGG | 0.424835 | tig0024137:+37732 | Msa1414600:CDS |
TGATGGTTTACTCCAACAAA+TGG | 0.425908 | tig0024137:-36947 | None:intergenic |
TCTGTCTTGATCGGTAATTA+TGG | 0.452701 | tig0024137:-37080 | None:intergenic |
AAGTATTGAATTTGGATTGA+AGG | 0.452798 | tig0024137:-38587 | None:intergenic |
ATTTGATGAAAGAAATCGTT+GGG | 0.454237 | tig0024137:+37336 | Msa1414600:CDS |
GATGGTTTACTCCAACAAAT+GGG | 0.455733 | tig0024137:-36946 | None:intergenic |
GAATATGACATTTGGTGAAA+AGG | 0.456326 | tig0024137:+36670 | Msa1414600:CDS |
CATGGCCAATCTGTGTTGTT+GGG | 0.456597 | tig0024137:+36968 | Msa1414600:CDS |
GTTCAAGTAGTTGATGTAGT+TGG | 0.457215 | tig0024137:+38389 | Msa1414600:CDS |
ATGATGATTTGTTTAAAATG+AGG | 0.460118 | tig0024137:+38034 | Msa1414600:CDS |
TAAAATGAGGAATTGGATCA+AGG | 0.463705 | tig0024137:+38047 | Msa1414600:CDS |
ATTGAGAGATAAAGTTGAAA+AGG | 0.468812 | tig0024137:+37495 | Msa1414600:CDS |
AGAGTGATTTCATGGAAAAG+TGG | 0.471372 | tig0024137:+37260 | Msa1414600:CDS |
TCCTCTAAAGAAGCATCCCC+TGG | 0.474862 | tig0024137:+38087 | Msa1414600:CDS |
TGTTGTTTGTTTCAATTCAA+AGG | 0.475247 | tig0024137:+37793 | Msa1414600:CDS |
CCACTGAGAGAAAATATAAG+AGG | 0.477796 | tig0024137:-37878 | None:intergenic |
ACTCCAACAAATGGGGCAAA+AGG | 0.479062 | tig0024137:-36938 | None:intergenic |
GGTTATGAGAATATGACATT+TGG | 0.482364 | tig0024137:+36662 | Msa1414600:CDS |
AGTATTGAATTTGGATTGAA+GGG | 0.484124 | tig0024137:-38586 | None:intergenic |
TTTGGGCAGATGCGAGATGT+AGG | 0.485083 | tig0024137:+36846 | Msa1414600:CDS |
GAACCATCTTCCACAATGCC+AGG | 0.487132 | tig0024137:-38105 | None:intergenic |
AGGATACTAAGTCCTTTACT+TGG | 0.489445 | tig0024137:+37011 | Msa1414600:CDS |
TGGATCAAAGTATGTGAGTA+AGG | 0.495275 | tig0024137:+36382 | Msa1414600:CDS |
CTATACCGACTCGAAGTAAA+GGG | 0.496353 | tig0024137:+38160 | Msa1414600:CDS |
TCATGATAATGAATGGTTGA+AGG | 0.498087 | tig0024137:+37309 | Msa1414600:CDS |
CATGATAATGAATGGTTGAA+GGG | 0.498314 | tig0024137:+37310 | Msa1414600:CDS |
TCCCCTGGCATTGTGGAAGA+TGG | 0.500694 | tig0024137:+38102 | Msa1414600:CDS |
TTGAACTTCATGATAATGAA+TGG | 0.502013 | tig0024137:+37302 | Msa1414600:CDS |
CCTATACCGACTCGAAGTAA+AGG | 0.502755 | tig0024137:+38159 | Msa1414600:CDS |
CTCGTCATCGATGGTGTTTG+TGG | 0.503130 | tig0024137:+37140 | Msa1414600:CDS |
ACAACACAGATTGGCCATGA+TGG | 0.504337 | tig0024137:-36964 | None:intergenic |
GAGTGATTTCATGGAAAAGT+GGG | 0.506412 | tig0024137:+37261 | Msa1414600:CDS |
TTTCATGGATCTGTCTTGAT+CGG | 0.508760 | tig0024137:-37089 | None:intergenic |
TTGGGCAGATGCGAGATGTA+GGG | 0.512318 | tig0024137:+36847 | Msa1414600:CDS |
AGGAGACTACGACTTGGGGC+TGG | 0.514634 | tig0024137:+36719 | Msa1414600:CDS |
AAGAGTTATGCACAATCTAT+GGG | 0.515967 | tig0024137:+36287 | Msa1414600:CDS |
ACTTGCTTTGAGAGATTGGA+AGG | 0.519549 | tig0024137:+37661 | Msa1414600:CDS |
ATTTGTATCTTCTGATGAAG+AGG | 0.520293 | tig0024137:+36145 | Msa1414600:CDS |
TGGATCCTCGTTTGAAAAGG+AGG | 0.528466 | tig0024137:+36570 | Msa1414600:CDS |
AACGTGTCTCTCACATATGC+AGG | 0.530851 | tig0024137:-37361 | None:intergenic |
CACAGCCCAACAACACAGAT+TGG | 0.536074 | tig0024137:-36973 | None:intergenic |
ATTCAAAGAATTTCAAGTGG+AGG | 0.539575 | tig0024137:+37615 | Msa1414600:CDS |
TCCCAAAAGCTCGTCATCGA+TGG | 0.545629 | tig0024137:+37131 | Msa1414600:CDS |
GGGCTGTGCTTTATTGTCGA+AGG | 0.551617 | tig0024137:+36988 | Msa1414600:CDS |
TTTGTTGGAGTAAACCATCA+TGG | 0.557125 | tig0024137:+36950 | Msa1414600:CDS |
TAAAATAGCGTGCTTTGTCA+GGG | 0.562727 | tig0024137:-36532 | None:intergenic |
TTAGAACTCAATGATCAAGC+TGG | 0.567016 | tig0024137:+36593 | Msa1414600:CDS |
GAAATTATATAGATAAAGTG+AGG | 0.574294 | tig0024137:+36699 | Msa1414600:CDS |
AACCATCTTCCACAATGCCA+GGG | 0.580735 | tig0024137:-38104 | None:intergenic |
TGAGAGAAAATATAAGAGGA+TGG | 0.581159 | tig0024137:-37874 | None:intergenic |
AGACATACCCTTGTTAAATG+TGG | 0.581997 | tig0024137:+37919 | Msa1414600:CDS |
ACATGGTTAGAGTGCATGCA+TGG | 0.583025 | tig0024137:+37043 | Msa1414600:CDS |
ATTCAATCTAGCCTTGCACT+TGG | 0.584905 | tig0024137:-36441 | None:intergenic |
TTACTTGGTTATTCCAAACA+TGG | 0.586529 | tig0024137:+37026 | Msa1414600:CDS |
GATGAAGAGGAAATTAGAGA+GGG | 0.589473 | tig0024137:+36158 | Msa1414600:CDS |
AGAAGCATCCCCTGGCATTG+TGG | 0.590947 | tig0024137:+38095 | Msa1414600:CDS |
CTGTGCTTTATTGTCGAAGG+AGG | 0.593919 | tig0024137:+36991 | Msa1414600:CDS |
TGTTTGGAATAACCAAGTAA+AGG | 0.602120 | tig0024137:-37023 | None:intergenic |
TATTTGATGAAAGAAATCGT+TGG | 0.605577 | tig0024137:+37335 | Msa1414600:CDS |
GATCAAAACCACATTTAACA+AGG | 0.611615 | tig0024137:-37927 | None:intergenic |
ATGATAATGAATGGTTGAAG+GGG | 0.618077 | tig0024137:+37311 | Msa1414600:CDS |
CGTGTTATTGATGACAGCAA+CGG | 0.618404 | tig0024137:-38877 | None:intergenic |
TGATGAAGAGGAAATTAGAG+AGG | 0.620703 | tig0024137:+36157 | Msa1414600:CDS |
TAAAGTTGAAAAGGAAAACA+AGG | 0.627416 | tig0024137:+37504 | Msa1414600:CDS |
AGTGAGGAGACTACGACTTG+GGG | 0.641932 | tig0024137:+36715 | Msa1414600:CDS |
AAAATTCAAAGAATTTCAAG+TGG | 0.644675 | tig0024137:+37612 | Msa1414600:CDS |
ACAGAGTGGAACTCAACAAG+AGG | 0.645479 | tig0024137:+38266 | Msa1414600:CDS |
ATCAAAACCACATTTAACAA+GGG | 0.648419 | tig0024137:-37926 | None:intergenic |
CTAAATATAGTTCCAACCTG+AGG | 0.648571 | tig0024137:-36236 | None:intergenic |
CTGTTAACTTTAGAACACAA+AGG | 0.648788 | tig0024137:-37834 | None:intergenic |
AAAGTGAGGAGACTACGACT+TGG | 0.649574 | tig0024137:+36713 | Msa1414600:CDS |
ACTTGGGGCTGGAGATGCTG+AGG | 0.650883 | tig0024137:+36730 | Msa1414600:CDS |
TTTGGGAGGAATGGACATGG+TGG | 0.651520 | tig0024137:+38547 | Msa1414600:CDS |
ATGGTTTACTCCAACAAATG+GGG | 0.652441 | tig0024137:-36945 | None:intergenic |
TTTACTCTAGCATGTAGTCG+TGG | 0.653028 | tig0024137:+36362 | Msa1414600:CDS |
ACCATCTTCCACAATGCCAG+GGG | 0.654020 | tig0024137:-38103 | None:intergenic |
GGACGCCCTTTACTTCGAGT+CGG | 0.664200 | tig0024137:-38165 | None:intergenic |
CTTGTACTTTAGATGCACAC+AGG | 0.674948 | tig0024137:-38361 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAATTGATTTATCATATAA+AGG | - | tig0024137:35988-36007 | None:intergenic | 10.0% |
!! | ATCTAATATTCAATATTTAA+TGG | + | tig0024137:38333-38352 | Msa1414600:intron | 10.0% |
!!! | TTTAATACATATATGTTTTT+AGG | + | tig0024137:38510-38529 | Msa1414600:intron | 10.0% |
!!! | TTAATACATATATGTTTTTA+GGG | + | tig0024137:38511-38530 | Msa1414600:intron | 10.0% |
!!! | TTTTTAATTTATTGCATTAG+TGG | + | tig0024137:36115-36134 | Msa1414600:intron | 15.0% |
!!! | TAATACATATATGTTTTTAG+GGG | + | tig0024137:38512-38531 | Msa1414600:intron | 15.0% |
!! | TAAGTTAACTACCTTAAATT+GGG | + | tig0024137:35929-35948 | Msa1414600:intron | 20.0% |
!!! | TTTTGATATTGAAACTGATT+TGG | + | tig0024137:36017-36036 | Msa1414600:intron | 20.0% |
!!! | TTTTAGAAGTAGTAAGTTTT+TGG | + | tig0024137:36550-36569 | Msa1414600:CDS | 20.0% |
!! | GAAATTATATAGATAAAGTG+AGG | + | tig0024137:36699-36718 | Msa1414600:CDS | 20.0% |
!!! | AAATTCTTTGAATTTTGCAT+TGG | - | tig0024137:37608-37627 | None:intergenic | 20.0% |
!! | AAAATTCAAAGAATTTCAAG+TGG | + | tig0024137:37612-37631 | Msa1414600:CDS | 20.0% |
!! | AATTAAAGATATAGTGTTTG+AGG | + | tig0024137:37732-37751 | Msa1414600:CDS | 20.0% |
!!! | AATTCAAAGGTATTTTATGT+AGG | + | tig0024137:37806-37825 | Msa1414600:CDS | 20.0% |
!!! | CATTTTAAACAAATCATCAT+CGG | - | tig0024137:38034-38053 | None:intergenic | 20.0% |
!!! | ATGATGATTTGTTTAAAATG+AGG | + | tig0024137:38034-38053 | Msa1414600:CDS | 20.0% |
!!! | ATTTGTTTAAAATGAGGAAT+TGG | + | tig0024137:38040-38059 | Msa1414600:CDS | 20.0% |
!! | AATATTCAATATTTAATGGC+AGG | + | tig0024137:38337-38356 | Msa1414600:intron | 20.0% |
!! | ATATTCAATATTTAATGGCA+GGG | + | tig0024137:38338-38357 | Msa1414600:intron | 20.0% |
!!! | AATACATATATGTTTTTAGG+GGG | + | tig0024137:38513-38532 | Msa1414600:intron | 20.0% |
!! | TTTCTGTAACATTAATATTG+TGG | + | tig0024137:38658-38677 | Msa1414600:intron | 20.0% |
!!! | AAGTATTTTCCATGTTATTT+AGG | + | tig0024137:38688-38707 | Msa1414600:intron | 20.0% |
!! | TTCATGAATTGAGAATAAAA+TGG | - | tig0024137:38716-38735 | None:intergenic | 20.0% |
!!! | TGTTAGTTTTTTCTTTTTGT+AGG | + | tig0024137:38834-38853 | Msa1414600:intron | 20.0% |
! | GTAAGTTAACTACCTTAAAT+TGG | + | tig0024137:35928-35947 | Msa1414600:intron | 25.0% |
! | TAAGCATTCAATACAAATCT+AGG | - | tig0024137:36048-36067 | None:intergenic | 25.0% |
! | AGTAACAAAAATACAGATGA+TGG | + | tig0024137:36329-36348 | Msa1414600:CDS | 25.0% |
! | GTAACAAAAATACAGATGAT+GGG | + | tig0024137:36330-36349 | Msa1414600:CDS | 25.0% |
!! | TGGTTTTTGTTAAAGGATTT+GGG | - | tig0024137:36424-36443 | None:intergenic | 25.0% |
!!! | TTGGTTTTTGTTAAAGGATT+TGG | - | tig0024137:36425-36444 | None:intergenic | 25.0% |
! | AATGCATGTATTTCTTTAGA+TGG | + | tig0024137:36461-36480 | Msa1414600:CDS | 25.0% |
! | TTTGTGGCATATAATGAAAA+AGG | + | tig0024137:37156-37175 | Msa1414600:CDS | 25.0% |
!! | TTGAACTTCATGATAATGAA+TGG | + | tig0024137:37302-37321 | Msa1414600:CDS | 25.0% |
! | TATTTGATGAAAGAAATCGT+TGG | + | tig0024137:37335-37354 | Msa1414600:CDS | 25.0% |
! | ATTTGATGAAAGAAATCGTT+GGG | + | tig0024137:37336-37355 | Msa1414600:CDS | 25.0% |
! | ATTGAGAGATAAAGTTGAAA+AGG | + | tig0024137:37495-37514 | Msa1414600:CDS | 25.0% |
! | TAAAGTTGAAAAGGAAAACA+AGG | + | tig0024137:37504-37523 | Msa1414600:CDS | 25.0% |
!!! | ATAGCTTGTATAAGTCATTT+TGG | + | tig0024137:37553-37572 | Msa1414600:CDS | 25.0% |
!! | TGTTGTTTGTTTCAATTCAA+AGG | + | tig0024137:37793-37812 | Msa1414600:CDS | 25.0% |
! | ATCAAAACCACATTTAACAA+GGG | - | tig0024137:37929-37948 | None:intergenic | 25.0% |
!! | AGTATTGAATTTGGATTGAA+GGG | - | tig0024137:38589-38608 | None:intergenic | 25.0% |
!!! | AAGTATTGAATTTGGATTGA+AGG | - | tig0024137:38590-38609 | None:intergenic | 25.0% |
!!! | TCACTCATAAGTATTGAATT+TGG | - | tig0024137:38598-38617 | None:intergenic | 25.0% |
! | AAAATGGAACCTAAATAACA+TGG | - | tig0024137:38700-38719 | None:intergenic | 25.0% |
! | TATTCTCAATTCATGAATCA+TGG | + | tig0024137:38719-38738 | Msa1414600:CDS | 25.0% |
!!! | TTCCTATTTTGAATTGTTAC+AGG | + | tig0024137:38745-38764 | Msa1414600:CDS | 25.0% |
! | TACCTGTAACAATTCAAAAT+AGG | - | tig0024137:38750-38769 | None:intergenic | 25.0% |
ATTTGTATCTTCTGATGAAG+AGG | + | tig0024137:36145-36164 | Msa1414600:CDS | 30.0% | |
AAGAGTTATGCACAATCTAT+GGG | + | tig0024137:36287-36306 | Msa1414600:CDS | 30.0% | |
!! | TTGCACTTGGTTTTTGTTAA+AGG | - | tig0024137:36431-36450 | None:intergenic | 30.0% |
TTTAACAAAAACCAAGTGCA+AGG | + | tig0024137:36430-36449 | Msa1414600:CDS | 30.0% | |
TCAATAGTTGTTGAAGCAAA+TGG | + | tig0024137:36641-36660 | Msa1414600:CDS | 30.0% | |
GGTTATGAGAATATGACATT+TGG | + | tig0024137:36662-36681 | Msa1414600:CDS | 30.0% | |
! | GAATATGACATTTGGTGAAA+AGG | + | tig0024137:36670-36689 | Msa1414600:CDS | 30.0% |
!!! | TCGCTTACGAAATGTTTTTT+GGG | + | tig0024137:36829-36848 | Msa1414600:CDS | 30.0% |
! | TGTTTGGAATAACCAAGTAA+AGG | - | tig0024137:37026-37045 | None:intergenic | 30.0% |
TTACTTGGTTATTCCAAACA+TGG | + | tig0024137:37026-37045 | Msa1414600:CDS | 30.0% | |
ATCCATGAAAAATGCAATTG+CGG | + | tig0024137:37102-37121 | Msa1414600:CDS | 30.0% | |
! | TGTTTTCATAGACTCGTAAT+CGG | - | tig0024137:37206-37225 | None:intergenic | 30.0% |
TTTGAGTAAGAGTGATTTCA+TGG | + | tig0024137:37252-37271 | Msa1414600:CDS | 30.0% | |
! | TCATGATAATGAATGGTTGA+AGG | + | tig0024137:37309-37328 | Msa1414600:CDS | 30.0% |
! | CATGATAATGAATGGTTGAA+GGG | + | tig0024137:37310-37329 | Msa1414600:CDS | 30.0% |
! | ATGATAATGAATGGTTGAAG+GGG | + | tig0024137:37311-37330 | Msa1414600:CDS | 30.0% |
!!! | AGTATGAACTCGTTTTTTGA+TGG | + | tig0024137:37418-37437 | Msa1414600:CDS | 30.0% |
! | ATTCAAAGAATTTCAAGTGG+AGG | + | tig0024137:37615-37634 | Msa1414600:CDS | 30.0% |
!! | CTGTTAACTTTAGAACACAA+AGG | - | tig0024137:37837-37856 | None:intergenic | 30.0% |
!! | CTTTGTGTTCTAAAGTTAAC+AGG | + | tig0024137:37835-37854 | Msa1414600:CDS | 30.0% |
TGAGAGAAAATATAAGAGGA+TGG | - | tig0024137:37877-37896 | None:intergenic | 30.0% | |
GATCAAAACCACATTTAACA+AGG | - | tig0024137:37930-37949 | None:intergenic | 30.0% | |
!!! | TGTGGTTTTGATCATTTAGT+TGG | + | tig0024137:37937-37956 | Msa1414600:CDS | 30.0% |
TAAAATGAGGAATTGGATCA+AGG | + | tig0024137:38047-38066 | Msa1414600:CDS | 30.0% | |
! | TTAGAAGACTTCCTTTTTGA+AGG | - | tig0024137:38192-38211 | None:intergenic | 30.0% |
!!! | ACTCTGTTGACTTCTTTTTT+GGG | - | tig0024137:38253-38272 | None:intergenic | 30.0% |
ACTTATGAGTGAAGTAAATC+AGG | + | tig0024137:38606-38625 | Msa1414600:CDS | 30.0% | |
ATGGGTGATAACCCAATTTA+AGG | - | tig0024137:35943-35962 | Msa1414590:intron | 35.0% | |
!! | GTAGTTTGATCAGTTGATGA+GGG | - | tig0024137:35966-35985 | None:intergenic | 35.0% |
TGATGAAGAGGAAATTAGAG+AGG | + | tig0024137:36157-36176 | Msa1414600:CDS | 35.0% | |
GATGAAGAGGAAATTAGAGA+GGG | + | tig0024137:36158-36177 | Msa1414600:CDS | 35.0% | |
TCATGAAGATGAAAAACCTC+AGG | + | tig0024137:36220-36239 | Msa1414600:CDS | 35.0% | |
CTAAATATAGTTCCAACCTG+AGG | - | tig0024137:36239-36258 | None:intergenic | 35.0% | |
CAAGAGTTATGCACAATCTA+TGG | + | tig0024137:36286-36305 | Msa1414600:CDS | 35.0% | |
! | TATGCACAATCTATGGGTTT+TGG | + | tig0024137:36293-36312 | Msa1414600:CDS | 35.0% |
TGGATCAAAGTATGTGAGTA+AGG | + | tig0024137:36382-36401 | Msa1414600:CDS | 35.0% | |
TAAAATAGCGTGCTTTGTCA+GGG | - | tig0024137:36535-36554 | None:intergenic | 35.0% | |
! | TTTTGGATCCTCGTTTGAAA+AGG | + | tig0024137:36567-36586 | Msa1414600:CDS | 35.0% |
TTAGAACTCAATGATCAAGC+TGG | + | tig0024137:36593-36612 | Msa1414600:CDS | 35.0% | |
!!! | GTCGCTTACGAAATGTTTTT+TGG | + | tig0024137:36828-36847 | Msa1414600:CDS | 35.0% |
! | AGGGCTGCATATGAATATTT+TGG | + | tig0024137:36866-36885 | Msa1414600:CDS | 35.0% |
ATGGTTTACTCCAACAAATG+GGG | - | tig0024137:36948-36967 | None:intergenic | 35.0% | |
GATGGTTTACTCCAACAAAT+GGG | - | tig0024137:36949-36968 | None:intergenic | 35.0% | |
TGATGGTTTACTCCAACAAA+TGG | - | tig0024137:36950-36969 | None:intergenic | 35.0% | |
TTTGTTGGAGTAAACCATCA+TGG | + | tig0024137:36950-36969 | Msa1414600:CDS | 35.0% | |
AGGATACTAAGTCCTTTACT+TGG | + | tig0024137:37011-37030 | Msa1414600:CDS | 35.0% | |
TGATCGGTAATTATGGCATT+TGG | - | tig0024137:37076-37095 | None:intergenic | 35.0% | |
TCTGTCTTGATCGGTAATTA+TGG | - | tig0024137:37083-37102 | None:intergenic | 35.0% | |
TTTCATGGATCTGTCTTGAT+CGG | - | tig0024137:37092-37111 | None:intergenic | 35.0% | |
!! | GAGTATCTACTTAGCTTTTC+TGG | - | tig0024137:37184-37203 | None:intergenic | 35.0% |
AGAGTGATTTCATGGAAAAG+TGG | + | tig0024137:37260-37279 | Msa1414600:CDS | 35.0% | |
GAGTGATTTCATGGAAAAGT+GGG | + | tig0024137:37261-37280 | Msa1414600:CDS | 35.0% | |
! | ATATGTGAGAGACACGTTTT+GGG | + | tig0024137:37366-37385 | Msa1414600:CDS | 35.0% |
!! | AAGGAAAACAAGGCTGATTT+TGG | + | tig0024137:37514-37533 | Msa1414600:CDS | 35.0% |
!! | TCATACTTGCTTTGAGAGAT+TGG | + | tig0024137:37657-37676 | Msa1414600:CDS | 35.0% |
CTCAAAGTCTTTCTCATTGA+AGG | - | tig0024137:37761-37780 | None:intergenic | 35.0% | |
CCACTGAGAGAAAATATAAG+AGG | - | tig0024137:37881-37900 | None:intergenic | 35.0% | |
! | CCTCTTATATTTTCTCTCAG+TGG | + | tig0024137:37878-37897 | Msa1414600:CDS | 35.0% |
! | CTTATATTTTCTCTCAGTGG+AGG | + | tig0024137:37881-37900 | Msa1414600:CDS | 35.0% |
AGACATACCCTTGTTAAATG+TGG | + | tig0024137:37919-37938 | Msa1414600:CDS | 35.0% | |
! | CTTTTATGAAGTTGCTTCTG+AGG | + | tig0024137:37999-38018 | Msa1414600:CDS | 35.0% |
!!! | CACTCTGTTGACTTCTTTTT+TGG | - | tig0024137:38254-38273 | None:intergenic | 35.0% |
CAAAAAAGAAGTCAACAGAG+TGG | + | tig0024137:38252-38271 | Msa1414600:CDS | 35.0% | |
! | GTTCAAGTAGTTGATGTAGT+TGG | + | tig0024137:38389-38408 | Msa1414600:CDS | 35.0% |
!! | TAGGGGGAACAAATTAGTTT+TGG | + | tig0024137:38529-38548 | Msa1414600:intron | 35.0% |
!!! | AGGGGGAACAAATTAGTTTT+GGG | + | tig0024137:38530-38549 | Msa1414600:intron | 35.0% |
!!! | CAAATTAGTTTTGGGAGGAA+TGG | + | tig0024137:38538-38557 | Msa1414600:CDS | 35.0% |
!! | TTGATCAGTTGATGAGGGAT+GGG | - | tig0024137:35961-35980 | None:intergenic | 40.0% |
!! | TTTGATCAGTTGATGAGGGA+TGG | - | tig0024137:35962-35981 | None:intergenic | 40.0% |
! | GGTAGTTTGATCAGTTGATG+AGG | - | tig0024137:35967-35986 | None:intergenic | 40.0% |
GAAGATGAAAAACCTCAGGT+TGG | + | tig0024137:36224-36243 | Msa1414600:CDS | 40.0% | |
TTTACTCTAGCATGTAGTCG+TGG | + | tig0024137:36362-36381 | Msa1414600:CDS | 40.0% | |
!! | ATTCAATCTAGCCTTGCACT+TGG | - | tig0024137:36444-36463 | None:intergenic | 40.0% |
CTAAAATAGCGTGCTTTGTC+AGG | - | tig0024137:36536-36555 | None:intergenic | 40.0% | |
! | TCTAACCTCCTTTTCAAACG+AGG | - | tig0024137:36578-36597 | None:intergenic | 40.0% |
! | AGCCGCAATTGCATTTTTCA+TGG | - | tig0024137:37107-37126 | None:intergenic | 40.0% |
! | CATATGTGAGAGACACGTTT+TGG | + | tig0024137:37365-37384 | Msa1414600:CDS | 40.0% |
! | TTGCATTGGTGAATGCTTTC+TGG | - | tig0024137:37594-37613 | None:intergenic | 40.0% |
!! | ACTTGCTTTGAGAGATTGGA+AGG | + | tig0024137:37661-37680 | Msa1414600:CDS | 40.0% |
! | TATTTTCTCTCAGTGGAGGA+AGG | + | tig0024137:37885-37904 | Msa1414600:CDS | 40.0% |
CTTTACTTCGAGTCGGTATA+GGG | - | tig0024137:38161-38180 | None:intergenic | 40.0% | |
!! | CTATACCGACTCGAAGTAAA+GGG | + | tig0024137:38160-38179 | Msa1414600:CDS | 40.0% |
!! | GAAGACTTCCTTTTTGAAGG+AGG | - | tig0024137:38189-38208 | None:intergenic | 40.0% |
CTTGTACTTTAGATGCACAC+AGG | - | tig0024137:38364-38383 | None:intergenic | 40.0% | |
!!! | GGGAACAAATTAGTTTTGGG+AGG | + | tig0024137:38533-38552 | Msa1414600:CDS | 40.0% |
! | CGTGTTATTGATGACAGCAA+CGG | - | tig0024137:38880-38899 | None:intergenic | 40.0% |
TGGATCCTCGTTTGAAAAGG+AGG | + | tig0024137:36570-36589 | Msa1414600:CDS | 45.0% | |
AAAGTGAGGAGACTACGACT+TGG | + | tig0024137:36713-36732 | Msa1414600:CDS | 45.0% | |
AAGTGAGGAGACTACGACTT+GGG | + | tig0024137:36714-36733 | Msa1414600:CDS | 45.0% | |
! | ATGCCTTTTGCCCCATTTGT+TGG | + | tig0024137:36935-36954 | Msa1414600:CDS | 45.0% |
ACTCCAACAAATGGGGCAAA+AGG | - | tig0024137:36941-36960 | None:intergenic | 45.0% | |
! | ACAACACAGATTGGCCATGA+TGG | - | tig0024137:36967-36986 | None:intergenic | 45.0% |
TCATGGCCAATCTGTGTTGT+TGG | + | tig0024137:36967-36986 | Msa1414600:CDS | 45.0% | |
! | CATGGCCAATCTGTGTTGTT+GGG | + | tig0024137:36968-36987 | Msa1414600:CDS | 45.0% |
! | CTGTGCTTTATTGTCGAAGG+AGG | + | tig0024137:36991-37010 | Msa1414600:CDS | 45.0% |
GCATGCACTCTAACCATGTT+TGG | - | tig0024137:37042-37061 | None:intergenic | 45.0% | |
ACATGGTTAGAGTGCATGCA+TGG | + | tig0024137:37043-37062 | Msa1414600:CDS | 45.0% | |
! | ACCATCGATGACGAGCTTTT+GGG | - | tig0024137:37135-37154 | None:intergenic | 45.0% |
AACGTGTCTCTCACATATGC+AGG | - | tig0024137:37364-37383 | None:intergenic | 45.0% | |
AACCATCTTCCACAATGCCA+GGG | - | tig0024137:38107-38126 | None:intergenic | 45.0% | |
CCTTTACTTCGAGTCGGTAT+AGG | - | tig0024137:38162-38181 | None:intergenic | 45.0% | |
!! | CCTATACCGACTCGAAGTAA+AGG | + | tig0024137:38159-38178 | Msa1414600:CDS | 45.0% |
ACAGAGTGGAACTCAACAAG+AGG | + | tig0024137:38266-38285 | Msa1414600:CDS | 45.0% | |
!!! | AGTTTTGGGAGGAATGGACA+TGG | + | tig0024137:38544-38563 | Msa1414600:CDS | 45.0% |
AGTGAGGAGACTACGACTTG+GGG | + | tig0024137:36715-36734 | Msa1414600:CDS | 50.0% | |
TTTGGGCAGATGCGAGATGT+AGG | + | tig0024137:36846-36865 | Msa1414600:CDS | 50.0% | |
TTGGGCAGATGCGAGATGTA+GGG | + | tig0024137:36847-36866 | Msa1414600:CDS | 50.0% | |
CACAGCCCAACAACACAGAT+TGG | - | tig0024137:36976-36995 | None:intergenic | 50.0% | |
! | GGGCTGTGCTTTATTGTCGA+AGG | + | tig0024137:36988-37007 | Msa1414600:CDS | 50.0% |
TCCCAAAAGCTCGTCATCGA+TGG | + | tig0024137:37131-37150 | Msa1414600:CDS | 50.0% | |
! | CACCATCGATGACGAGCTTT+TGG | - | tig0024137:37136-37155 | None:intergenic | 50.0% |
CTCGTCATCGATGGTGTTTG+TGG | + | tig0024137:37140-37159 | Msa1414600:CDS | 50.0% | |
!! | TGTGAGAGACACGTTTTGGG+CGG | + | tig0024137:37369-37388 | Msa1414600:CDS | 50.0% |
!! | TCCTCTAAAGAAGCATCCCC+TGG | + | tig0024137:38087-38106 | Msa1414600:CDS | 50.0% |
ACCATCTTCCACAATGCCAG+GGG | - | tig0024137:38106-38125 | None:intergenic | 50.0% | |
GAACCATCTTCCACAATGCC+AGG | - | tig0024137:38108-38127 | None:intergenic | 50.0% | |
!! | AAGGGCGTCCTCCTTCAAAA+AGG | + | tig0024137:38178-38197 | Msa1414600:CDS | 50.0% |
TTTGGGAGGAATGGACATGG+TGG | + | tig0024137:38547-38566 | Msa1414600:CDS | 50.0% | |
!! | GTGAGAGACACGTTTTGGGC+GGG | + | tig0024137:37370-37389 | Msa1414600:CDS | 55.0% |
GCCAGGGGATGCTTCTTTAG+AGG | - | tig0024137:38091-38110 | None:intergenic | 55.0% | |
!! | AGAAGCATCCCCTGGCATTG+TGG | + | tig0024137:38095-38114 | Msa1414600:CDS | 55.0% |
TCCCCTGGCATTGTGGAAGA+TGG | + | tig0024137:38102-38121 | Msa1414600:CDS | 55.0% | |
GGACGCCCTTTACTTCGAGT+CGG | - | tig0024137:38168-38187 | None:intergenic | 55.0% | |
! | AGGAGACTACGACTTGGGGC+TGG | + | tig0024137:36719-36738 | Msa1414600:CDS | 60.0% |
ACTTGGGGCTGGAGATGCTG+AGG | + | tig0024137:36730-36749 | Msa1414600:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0024137 | gene | 35906 | 38909 | 35906 | ID=Msa1414600;Name=Msa1414600 |
tig0024137 | mRNA | 35906 | 38909 | 35906 | ID=Msa1414600-mRNA-1;Parent=Msa1414600;Name=Msa1414600-mRNA-1;_AED=0.25;_eAED=0.04;_QI=0|0.6|0.16|1|1|1|6|0|817 |
tig0024137 | exon | 35906 | 35927 | 35906 | ID=Msa1414600-mRNA-1:exon:21881;Parent=Msa1414600-mRNA-1 |
tig0024137 | exon | 36135 | 38287 | 36135 | ID=Msa1414600-mRNA-1:exon:21882;Parent=Msa1414600-mRNA-1 |
tig0024137 | exon | 38359 | 38430 | 38359 | ID=Msa1414600-mRNA-1:exon:21883;Parent=Msa1414600-mRNA-1 |
tig0024137 | exon | 38532 | 38627 | 38532 | ID=Msa1414600-mRNA-1:exon:21884;Parent=Msa1414600-mRNA-1 |
tig0024137 | exon | 38710 | 38766 | 38710 | ID=Msa1414600-mRNA-1:exon:21885;Parent=Msa1414600-mRNA-1 |
tig0024137 | exon | 38856 | 38909 | 38856 | ID=Msa1414600-mRNA-1:exon:21886;Parent=Msa1414600-mRNA-1 |
tig0024137 | CDS | 35906 | 35927 | 35906 | ID=Msa1414600-mRNA-1:cds;Parent=Msa1414600-mRNA-1 |
tig0024137 | CDS | 36135 | 38287 | 36135 | ID=Msa1414600-mRNA-1:cds;Parent=Msa1414600-mRNA-1 |
tig0024137 | CDS | 38359 | 38430 | 38359 | ID=Msa1414600-mRNA-1:cds;Parent=Msa1414600-mRNA-1 |
tig0024137 | CDS | 38532 | 38627 | 38532 | ID=Msa1414600-mRNA-1:cds;Parent=Msa1414600-mRNA-1 |
tig0024137 | CDS | 38710 | 38766 | 38710 | ID=Msa1414600-mRNA-1:cds;Parent=Msa1414600-mRNA-1 |
tig0024137 | CDS | 38856 | 38909 | 38856 | ID=Msa1414600-mRNA-1:cds;Parent=Msa1414600-mRNA-1 |
Gene Sequence |
Protein sequence |