Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1415850 | sp|Q8GT74|NIP2_ARATH | 64.667 | 150 | 53 | 0 | 379 | 528 | 89 | 238 | 3.29e-62 | 208 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1415850 | G7K240 | 84.667 | 300 | 38 | 1 | 88 | 379 | 239 | 538 | 5.54e-160 | 480 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1415850 | MtrunA17_Chr5g0437131 | 84.667 | 300 | 38 | 1 | 88 | 379 | 239 | 538 | 7.97e-163 | 481 |
Msa1415850 | MtrunA17_Chr8g0371291 | 78.667 | 150 | 25 | 1 | 379 | 528 | 80 | 222 | 3.68e-79 | 249 |
Msa1415850 | MtrunA17_Chr6g0480541 | 61.991 | 221 | 62 | 5 | 213 | 421 | 859 | 1069 | 1.55e-73 | 255 |
Msa1415850 | MtrunA17_Chr5g0406031 | 68.000 | 150 | 47 | 1 | 379 | 528 | 83 | 231 | 3.27e-65 | 213 |
Msa1415850 | MtrunA17_Chr6g0480481 | 52.174 | 161 | 33 | 2 | 227 | 379 | 9 | 133 | 1.71e-41 | 149 |
Msa1415850 | MtrunA17_Chr8g0369241 | 38.378 | 185 | 95 | 5 | 210 | 379 | 91 | 271 | 2.82e-24 | 108 |
Msa1415850 | MtrunA17_Chr4g0060981 | 35.443 | 158 | 86 | 4 | 379 | 528 | 67 | 216 | 1.32e-21 | 93.6 |
Msa1415850 | MtrunA17_Chr3g0126701 | 77.358 | 53 | 12 | 0 | 528 | 580 | 510 | 562 | 2.03e-20 | 95.9 |
Msa1415850 | MtrunA17_Chr5g0444161 | 33.333 | 132 | 66 | 6 | 408 | 528 | 107 | 227 | 9.63e-14 | 71.2 |
Msa1415850 | MtrunA17_Chr1g0147121 | 61.224 | 49 | 19 | 0 | 532 | 580 | 483 | 531 | 1.00e-13 | 74.7 |
Msa1415850 | MtrunA17_Chr5g0444141 | 33.333 | 123 | 78 | 3 | 408 | 528 | 142 | 262 | 1.96e-12 | 67.8 |
Msa1415850 | MtrunA17_Chr1g0210061 | 33.562 | 146 | 80 | 4 | 247 | 379 | 605 | 746 | 2.18e-12 | 70.1 |
Msa1415850 | MtrunA17_Chr8g0388231 | 43.421 | 76 | 42 | 1 | 457 | 532 | 309 | 383 | 3.65e-12 | 68.6 |
Msa1415850 | MtrunA17_Chr4g0067591 | 35.065 | 77 | 45 | 1 | 452 | 528 | 75 | 146 | 4.44e-12 | 67.0 |
Msa1415850 | MtrunA17_Chr6g0451031 | 48.889 | 45 | 23 | 0 | 484 | 528 | 67 | 111 | 4.44e-12 | 63.5 |
Msa1415850 | MtrunA17_Chr3g0128771 | 41.026 | 78 | 39 | 2 | 456 | 530 | 90 | 163 | 5.85e-12 | 64.7 |
Msa1415850 | MtrunA17_Chr7g0246761 | 32.558 | 129 | 64 | 5 | 406 | 528 | 21 | 132 | 6.34e-12 | 64.7 |
Msa1415850 | MtrunA17_Chr5g0411081 | 37.209 | 86 | 47 | 1 | 443 | 528 | 112 | 190 | 8.43e-12 | 67.0 |
Msa1415850 | MtrunA17_Chr8g0366561 | 43.243 | 74 | 41 | 1 | 457 | 530 | 114 | 186 | 1.14e-11 | 66.6 |
Msa1415850 | MtrunA17_Chr8g0369571 | 48.889 | 45 | 23 | 0 | 484 | 528 | 88 | 132 | 2.97e-11 | 62.8 |
Msa1415850 | MtrunA17_Chr5g0437361 | 37.209 | 86 | 53 | 1 | 450 | 535 | 68 | 152 | 4.55e-11 | 62.0 |
Msa1415850 | MtrunA17_Chr6g0451051 | 31.915 | 94 | 61 | 1 | 456 | 549 | 39 | 129 | 5.54e-11 | 61.2 |
Msa1415850 | MtrunA17_Chr6g0451041 | 42.188 | 64 | 37 | 0 | 486 | 549 | 18 | 81 | 7.91e-11 | 59.3 |
Msa1415850 | MtrunA17_Chr8g0383921 | 32.692 | 104 | 65 | 2 | 455 | 558 | 109 | 207 | 9.14e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1415850 | AT2G40120.1 | 72.941 | 170 | 38 | 1 | 218 | 379 | 227 | 396 | 4.45e-77 | 255 |
Msa1415850 | AT1G73460.2 | 60.577 | 208 | 71 | 3 | 183 | 379 | 786 | 993 | 1.56e-70 | 247 |
Msa1415850 | AT1G73460.1 | 60.577 | 208 | 71 | 3 | 183 | 379 | 786 | 993 | 1.56e-70 | 247 |
Msa1415850 | AT1G73450.1 | 66.857 | 175 | 50 | 1 | 213 | 379 | 802 | 976 | 2.00e-70 | 246 |
Msa1415850 | AT3G17750.1 | 64.571 | 175 | 54 | 1 | 213 | 379 | 788 | 962 | 1.46e-66 | 235 |
Msa1415850 | AT2G17730.1 | 64.667 | 150 | 53 | 0 | 379 | 528 | 89 | 238 | 3.35e-63 | 208 |
Msa1415850 | AT4G35840.1 | 64.667 | 150 | 53 | 0 | 379 | 528 | 84 | 233 | 1.81e-62 | 206 |
Msa1415850 | AT5G66070.5 | 63.333 | 150 | 50 | 1 | 379 | 528 | 74 | 218 | 7.09e-59 | 196 |
Msa1415850 | AT5G66070.1 | 63.333 | 150 | 50 | 1 | 379 | 528 | 74 | 218 | 7.09e-59 | 196 |
Msa1415850 | AT2G17730.2 | 64.336 | 143 | 51 | 0 | 379 | 521 | 89 | 231 | 3.80e-58 | 195 |
Msa1415850 | AT4G35840.2 | 53.297 | 182 | 53 | 1 | 379 | 528 | 84 | 265 | 8.72e-56 | 189 |
Msa1415850 | AT5G66070.2 | 54.598 | 174 | 50 | 2 | 379 | 528 | 74 | 242 | 2.71e-53 | 182 |
Msa1415850 | AT5G66070.4 | 58.929 | 112 | 41 | 1 | 380 | 491 | 75 | 181 | 6.33e-36 | 133 |
Msa1415850 | AT5G66070.3 | 48.175 | 137 | 42 | 2 | 379 | 491 | 74 | 205 | 1.04e-28 | 114 |
Msa1415850 | AT1G74410.1 | 36.000 | 150 | 93 | 1 | 381 | 530 | 74 | 220 | 3.18e-24 | 101 |
Msa1415850 | AT5G35980.2 | 37.569 | 181 | 94 | 5 | 228 | 393 | 92 | 268 | 4.48e-23 | 104 |
Msa1415850 | AT5G35980.3 | 37.705 | 183 | 91 | 6 | 228 | 393 | 57 | 233 | 4.61e-23 | 104 |
Msa1415850 | AT5G35980.1 | 37.705 | 183 | 91 | 6 | 228 | 393 | 92 | 268 | 4.78e-23 | 104 |
Msa1415850 | AT3G20395.1 | 33.333 | 123 | 76 | 2 | 408 | 529 | 97 | 214 | 7.74e-16 | 77.4 |
Msa1415850 | AT3G18773.1 | 39.560 | 91 | 49 | 2 | 451 | 537 | 97 | 185 | 2.69e-13 | 70.1 |
Msa1415850 | AT5G53430.1 | 52.632 | 57 | 27 | 0 | 526 | 582 | 486 | 542 | 9.76e-13 | 72.0 |
Msa1415850 | AT1G49200.1 | 41.892 | 74 | 41 | 1 | 455 | 528 | 107 | 178 | 1.30e-12 | 68.2 |
Msa1415850 | AT2G17450.1 | 37.179 | 78 | 45 | 1 | 455 | 528 | 67 | 144 | 3.78e-12 | 65.9 |
Msa1415850 | AT5G05280.1 | 41.333 | 75 | 40 | 1 | 456 | 530 | 87 | 157 | 4.55e-12 | 65.5 |
Msa1415850 | AT4G27910.1 | 52.941 | 51 | 24 | 0 | 532 | 582 | 477 | 527 | 1.30e-11 | 68.2 |
Msa1415850 | AT5G17600.1 | 40.000 | 90 | 49 | 2 | 439 | 528 | 100 | 184 | 2.77e-11 | 65.9 |
Msa1415850 | AT1G49210.1 | 40.541 | 74 | 42 | 1 | 455 | 528 | 106 | 177 | 2.88e-11 | 63.9 |
Msa1415850 | AT5G01880.1 | 41.558 | 77 | 41 | 2 | 455 | 530 | 76 | 149 | 4.68e-11 | 62.0 |
Msa1415850 | AT3G16720.1 | 36.364 | 77 | 45 | 1 | 452 | 528 | 89 | 161 | 5.35e-11 | 64.3 |
Msa1415850 | AT2G27940.1 | 39.241 | 79 | 38 | 2 | 456 | 531 | 114 | 185 | 8.04e-11 | 63.2 |
Msa1415850 | AT5G53110.1 | 35.443 | 79 | 50 | 1 | 457 | 535 | 302 | 379 | 8.20e-11 | 64.7 |
Msa1415850 | AT5G10380.1 | 37.209 | 86 | 50 | 2 | 443 | 528 | 96 | 177 | 8.37e-11 | 63.9 |
Find 119 sgRNAs with CRISPR-Local
Find 364 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTAGCTACCTTAATTTAA+AGG | 0.143063 | tig0024288:+49334 | Msa1415850:CDS |
CTTTGGCATTCGAATAATTC+TGG | 0.197162 | tig0024288:+50157 | Msa1415850:CDS |
CATAAATTCAACCAAGAATA+TGG | 0.227119 | tig0024288:+49980 | Msa1415850:CDS |
GCTTAATTTCCTTTAAATTA+AGG | 0.237843 | tig0024288:-49343 | None:intergenic |
ATGCTTCACCACCATATTCT+TGG | 0.272074 | tig0024288:-49991 | None:intergenic |
TTAAGGTAGCTAATGTTTAT+AGG | 0.288253 | tig0024288:-49326 | None:intergenic |
TGCTCACTGTCTCTGCATAA+TGG | 0.302576 | tig0024288:-50553 | None:intergenic |
ACAGAAAAGCAAGCACTTAA+TGG | 0.303631 | tig0024288:+50676 | Msa1415850:CDS |
TTCCTGTTCAATTTGCCTTC+AGG | 0.305106 | tig0024288:+50432 | Msa1415850:CDS |
TTGTATGTTCTATTGATCTT+TGG | 0.316674 | tig0024288:+50140 | Msa1415850:CDS |
CATTACTCGACAGTGTTTAG+AGG | 0.319594 | tig0024288:+50039 | Msa1415850:CDS |
GGTTAAACGTATGATGATAA+TGG | 0.326660 | tig0024288:-50489 | None:intergenic |
CATTCGAATAATTCTGGAAT+AGG | 0.333342 | tig0024288:+50163 | Msa1415850:CDS |
CACTTGTGATTGAGACTATT+GGG | 0.340792 | tig0024288:-50378 | None:intergenic |
GTTAAACGTATGATGATAAT+GGG | 0.346709 | tig0024288:-50488 | None:intergenic |
TAGCTTCGATCCGGAGGTTT+GGG | 0.350467 | tig0024288:-49068 | None:intergenic |
ATGCGCAATGGCTTCTTTCT+CGG | 0.367067 | tig0024288:-49243 | None:intergenic |
TCACTTGTGATTGAGACTAT+TGG | 0.368196 | tig0024288:-50379 | None:intergenic |
ATAGCTTCGATCCGGAGGTT+TGG | 0.378202 | tig0024288:-49069 | None:intergenic |
TTCTAACAGTCTCTCCCATT+TGG | 0.383802 | tig0024288:-50459 | None:intergenic |
GCTCACTGTCTCTGCATAAT+GGG | 0.397596 | tig0024288:-50552 | None:intergenic |
GCAATCTGAACTATGCTTCA+TGG | 0.399375 | tig0024288:-49426 | None:intergenic |
AGACAGAATTATGAGGCTTC+AGG | 0.401315 | tig0024288:-50102 | None:intergenic |
ATTGCAATATTTACATAACT+TGG | 0.409904 | tig0024288:+50063 | Msa1415850:CDS |
TAAGAAGCTTGATTTCATCT+AGG | 0.411237 | tig0024288:-49835 | None:intergenic |
TGCCTTCAGGATTTCCAAAT+GGG | 0.419108 | tig0024288:+50445 | Msa1415850:CDS |
GAGTGAAGAACTCCATGTTC+CGG | 0.421411 | tig0024288:+49541 | Msa1415850:CDS |
CGATCCGGAGGTTTGGGTAG+TGG | 0.425881 | tig0024288:-49062 | None:intergenic |
TTTCAACATATCTTTGACAT+TGG | 0.427382 | tig0024288:+50316 | Msa1415850:CDS |
GTTCAGCAGGTTCTTGTAGT+GGG | 0.431132 | tig0024288:+49300 | Msa1415850:CDS |
ATCCTGAAGGCAAATTGAAC+AGG | 0.433788 | tig0024288:-50434 | None:intergenic |
GTTGCTGCAGCAGCTCACGC+CGG | 0.436700 | tig0024288:+51389 | Msa1415850:intron |
GGATGTGACAGAGGCTTACT+AGG | 0.444182 | tig0024288:+50337 | Msa1415850:CDS |
GGCTTCTTTCTCGGCACTGA+GGG | 0.450284 | tig0024288:-49234 | None:intergenic |
TCTGGTGGTGCAGGAAGTGG+TGG | 0.450710 | tig0024288:-49140 | None:intergenic |
TATTTCAACAAACATGTAAT+GGG | 0.455848 | tig0024288:-49210 | None:intergenic |
TTATGACTATTTCTACCATC+AGG | 0.460782 | tig0024288:+49907 | Msa1415850:CDS |
TCTCCATCTGTGGCAGCCTC+CGG | 0.462617 | tig0024288:-49560 | None:intergenic |
TTGCTGCAGCAGCTCACGCC+GGG | 0.462792 | tig0024288:+51390 | Msa1415850:intron |
TTGCCTTCAGGATTTCCAAA+TGG | 0.467728 | tig0024288:+50444 | Msa1415850:CDS |
CTACAAGAACCTGCTGAACC+TGG | 0.473048 | tig0024288:-49296 | None:intergenic |
GTGTCTGGTGGTGCAGGAAG+TGG | 0.476291 | tig0024288:-49143 | None:intergenic |
TTGGGTAGTGGCGGCAGAGT+CGG | 0.481200 | tig0024288:-49050 | None:intergenic |
TAAGTTTGCACGCAGAAGTT+CGG | 0.485105 | tig0024288:-49948 | None:intergenic |
AAAAGCAGTCCAGGTTCAGC+AGG | 0.497375 | tig0024288:+49287 | Msa1415850:CDS |
CACTTAGTTGTGTGCAAGTG+TGG | 0.500438 | tig0024288:+50643 | Msa1415850:CDS |
CTGTGGCAGCCTCCGGAACA+TGG | 0.502526 | tig0024288:-49553 | None:intergenic |
GGTTCAGCAGGTTCTTGTAG+TGG | 0.505056 | tig0024288:+49299 | Msa1415850:CDS |
TTGCAATATTTACATAACTT+GGG | 0.506178 | tig0024288:+50064 | Msa1415850:CDS |
AGTATGTGGCGTTTATCTCC+CGG | 0.506715 | tig0024288:-49878 | None:intergenic |
GTTCCGGAGGCTGCCACAGA+TGG | 0.508408 | tig0024288:+49557 | Msa1415850:CDS |
ATCTTCTGATAGCTTCGATC+CGG | 0.508560 | tig0024288:-49077 | None:intergenic |
ATAGAGAAGACAGAATTATG+AGG | 0.508809 | tig0024288:-50109 | None:intergenic |
CACACAACTAAGTGTAGGCT+TGG | 0.511853 | tig0024288:-50634 | None:intergenic |
GTATTTCAACAAACATGTAA+TGG | 0.512226 | tig0024288:-49211 | None:intergenic |
CCATTGCTTTCAATCCCATT+CGG | 0.516665 | tig0024288:-49497 | None:intergenic |
ACCTACCTTGCATTGACAAG+TGG | 0.517649 | tig0024288:+50509 | Msa1415850:CDS |
ACCAGACACCGAAAATAGAT+TGG | 0.519369 | tig0024288:+49157 | Msa1415850:CDS |
GGAGTTCTTCACTCAAATAT+CGG | 0.520249 | tig0024288:-49532 | None:intergenic |
ATCTGTTTCAACAACTTCGA+TGG | 0.530198 | tig0024288:-49471 | None:intergenic |
GCCATTTGTTGATCATGCCC+CGG | 0.533576 | tig0024288:-51408 | None:intergenic |
TTGAAACAGATCTACCGAAT+GGG | 0.535513 | tig0024288:+49483 | Msa1415850:CDS |
TAAAGGAAATTAAGCTGAGT+CGG | 0.536864 | tig0024288:+49351 | Msa1415850:CDS |
GGTGGTGCAGGAAGTGGTGG+AGG | 0.539230 | tig0024288:-49137 | None:intergenic |
TCGGTTCAGCTACCTTCAGT+AGG | 0.540246 | tig0024288:+49753 | Msa1415850:CDS |
TTCTGATAGCTTCGATCCGG+AGG | 0.545370 | tig0024288:-49074 | None:intergenic |
GATTGTGCTGAACACGGTCA+TGG | 0.546919 | tig0024288:+49703 | Msa1415850:CDS |
GTGCATGGAAAGAATAGGAC+TGG | 0.553009 | tig0024288:+49656 | Msa1415850:CDS |
GCCGCCACTACCCAAACCTC+CGG | 0.562559 | tig0024288:+49058 | Msa1415850:CDS |
AACTTCAGAATTATGCGCAA+TGG | 0.563755 | tig0024288:-49255 | None:intergenic |
GTATGTGGCGTTTATCTCCC+GGG | 0.564712 | tig0024288:-49877 | None:intergenic |
TTCAGCAGGTTCTTGTAGTG+GGG | 0.568017 | tig0024288:+49301 | Msa1415850:CDS |
GTACAAGTCTCCCACTCACT+AGG | 0.571667 | tig0024288:-50219 | None:intergenic |
AGTCATAAAGACGCAGTATG+TGG | 0.573921 | tig0024288:-49892 | None:intergenic |
TGCAGGAAGTGGTGGAGGCA+AGG | 0.579538 | tig0024288:-49132 | None:intergenic |
GACAAGTGGCTCATCAAGCA+TGG | 0.579677 | tig0024288:+50523 | Msa1415850:CDS |
CTCCCATTTGGAAATCCTGA+AGG | 0.579740 | tig0024288:-50447 | None:intergenic |
GAATTGTGCATGGAAAGAAT+AGG | 0.580039 | tig0024288:+49651 | Msa1415850:CDS |
TTCAGTAGGGATGCTCTCGA+TGG | 0.583985 | tig0024288:+49767 | Msa1415850:CDS |
CGGTTCAGCTACCTTCAGTA+GGG | 0.590898 | tig0024288:+49754 | Msa1415850:CDS |
TGCTGCAGCAGCTCACGCCG+GGG | 0.593738 | tig0024288:+51391 | Msa1415850:intron |
GTTCAAAGTCAGATGGGTGC+AGG | 0.598923 | tig0024288:+50274 | Msa1415850:CDS |
AAAAGCAAGCACTTAATGGA+TGG | 0.599900 | tig0024288:+50680 | Msa1415850:CDS |
CAATGAATAAATGTTCCTGA+TGG | 0.601057 | tig0024288:-49922 | None:intergenic |
GAATGCTGTTCAAAGTCAGA+TGG | 0.601226 | tig0024288:+50267 | Msa1415850:CDS |
GGGATTGAAAGCAATGGAGT+AGG | 0.601533 | tig0024288:+49503 | Msa1415850:CDS |
TTATTACTAGCCTAGTGAGT+GGG | 0.602053 | tig0024288:+50209 | Msa1415850:CDS |
TGTGAATGTTTCGATAGTAG+TGG | 0.604151 | tig0024288:-49011 | None:intergenic |
GGTGAAATTCATCACAACAT+CGG | 0.604562 | tig0024288:+49178 | Msa1415850:CDS |
TCCGGAGGTTTGGGTAGTGG+CGG | 0.605445 | tig0024288:-49059 | None:intergenic |
ATGAGCCACTTGTCAATGCA+AGG | 0.605600 | tig0024288:-50514 | None:intergenic |
GTTGAAACAGATCTACCGAA+TGG | 0.607989 | tig0024288:+49482 | Msa1415850:CDS |
CCGAATGGGATTGAAAGCAA+TGG | 0.608264 | tig0024288:+49497 | Msa1415850:CDS |
TTTGACATTGGATGTGACAG+AGG | 0.609823 | tig0024288:+50328 | Msa1415850:CDS |
TTTGAGCTAAGAATTGTGCA+TGG | 0.611242 | tig0024288:+49641 | Msa1415850:CDS |
GACTGGATTTGAAGAAAACA+AGG | 0.612197 | tig0024288:+49673 | Msa1415850:CDS |
TGGCTTCTTTCTCGGCACTG+AGG | 0.612609 | tig0024288:-49235 | None:intergenic |
ATCGAGAGCATCCCTACTGA+AGG | 0.612994 | tig0024288:-49765 | None:intergenic |
GCATAGTTCAGATTGCTACA+AGG | 0.615746 | tig0024288:+49433 | Msa1415850:CDS |
TACTATGTGACAGATTATCT+CGG | 0.618368 | tig0024288:+49734 | Msa1415850:CDS |
ATTATTATCCTCTCCATCTG+TGG | 0.619270 | tig0024288:-49570 | None:intergenic |
TGAACACGGTCATGGCTGAA+AGG | 0.620232 | tig0024288:+49711 | Msa1415850:CDS |
CTTGTCGATAAGCACGACCC+GGG | 0.628203 | tig0024288:+49860 | Msa1415850:CDS |
ACTTGCACACAACTAAGTGT+AGG | 0.640898 | tig0024288:-50639 | None:intergenic |
ACTTTGAACAGCATTCAACA+TGG | 0.643300 | tig0024288:-50260 | None:intergenic |
GGAGGCTGCCACAGATGGAG+AGG | 0.645603 | tig0024288:+49562 | Msa1415850:CDS |
AAGCTATCAGAAGATTCTCG+TGG | 0.653064 | tig0024288:+49085 | Msa1415850:CDS |
ATTATTACTAGCCTAGTGAG+TGG | 0.653310 | tig0024288:+50208 | Msa1415850:CDS |
TGAAGAACTCCATGTTCCGG+AGG | 0.656619 | tig0024288:+49544 | Msa1415850:CDS |
AATGCTGTTCAAAGTCAGAT+GGG | 0.656650 | tig0024288:+50268 | Msa1415850:CDS |
ACTTGTCGATAAGCACGACC+CGG | 0.656700 | tig0024288:+49859 | Msa1415850:CDS |
GCTTCTTTCTCGGCACTGAG+GGG | 0.663612 | tig0024288:-49233 | None:intergenic |
AAATTCAACCAAGAATATGG+TGG | 0.668921 | tig0024288:+49983 | Msa1415850:CDS |
TTAAACGTATGATGATAATG+GGG | 0.679275 | tig0024288:-50487 | None:intergenic |
AGACTTGTACGTGAAAGAGT+TGG | 0.691935 | tig0024288:+50232 | Msa1415850:CDS |
GCCACTTGTCAATGCAAGGT+AGG | 0.694066 | tig0024288:-50510 | None:intergenic |
AATGGATGGCAACAACACAA+AGG | 0.695166 | tig0024288:+50694 | Msa1415850:CDS |
AGTGCTGATTGTGCTGAACA+CGG | 0.717577 | tig0024288:+49697 | Msa1415850:CDS |
AGAGTCGGAGTGAAAACACG+TGG | 0.744559 | tig0024288:-49035 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTTCAACAAACATGTAAT+GGG | - | tig0024288:49213-49232 | None:intergenic | 20.0% |
!! | GCTTAATTTCCTTTAAATTA+AGG | - | tig0024288:49346-49365 | None:intergenic | 20.0% |
!! | GAAGATTATTAAAAATGACA+AGG | + | tig0024288:49796-49815 | Msa1415850:CDS | 20.0% |
!! | ATTGCAATATTTACATAACT+TGG | + | tig0024288:50063-50082 | Msa1415850:CDS | 20.0% |
!! | TTGCAATATTTACATAACTT+GGG | + | tig0024288:50064-50083 | Msa1415850:CDS | 20.0% |
!!! | AAGATTAATGTTTTTTGCAA+TGG | + | tig0024288:50592-50611 | Msa1415850:CDS | 20.0% |
!! | TCTAGAAAATTACTAAGATT+TGG | - | tig0024288:51040-51059 | None:intergenic | 20.0% |
!!! | TTTTATTTTATTTCAACCCA+TGG | + | tig0024288:51079-51098 | Msa1415850:intron | 20.0% |
!!! | TTTATTTTATTTCAACCCAT+GGG | + | tig0024288:51080-51099 | Msa1415850:intron | 20.0% |
!! | TATTTCAACAAACATGTAAT+GGG | - | tig0024288:49213-49232 | None:intergenic | 20.0% |
!! | GCTTAATTTCCTTTAAATTA+AGG | - | tig0024288:49346-49365 | None:intergenic | 20.0% |
!! | GAAGATTATTAAAAATGACA+AGG | + | tig0024288:49796-49815 | Msa1415850:CDS | 20.0% |
!! | ATTGCAATATTTACATAACT+TGG | + | tig0024288:50063-50082 | Msa1415850:CDS | 20.0% |
!! | TTGCAATATTTACATAACTT+GGG | + | tig0024288:50064-50083 | Msa1415850:CDS | 20.0% |
!!! | AAGATTAATGTTTTTTGCAA+TGG | + | tig0024288:50592-50611 | Msa1415850:CDS | 20.0% |
!! | TCTAGAAAATTACTAAGATT+TGG | - | tig0024288:51040-51059 | None:intergenic | 20.0% |
!!! | TTTTATTTTATTTCAACCCA+TGG | + | tig0024288:51079-51098 | Msa1415850:intron | 20.0% |
!!! | TTTATTTTATTTCAACCCAT+GGG | + | tig0024288:51080-51099 | Msa1415850:intron | 20.0% |
!! | GAATTTCACCAATCTATTTT+CGG | - | tig0024288:49168-49187 | None:intergenic | 25.0% |
! | GTATTTCAACAAACATGTAA+TGG | - | tig0024288:49214-49233 | None:intergenic | 25.0% |
! | TTAAGGTAGCTAATGTTTAT+AGG | - | tig0024288:49329-49348 | None:intergenic | 25.0% |
! | CATTAGCTACCTTAATTTAA+AGG | + | tig0024288:49334-49353 | Msa1415850:CDS | 25.0% |
! | CATAAATTCAACCAAGAATA+TGG | + | tig0024288:49980-49999 | Msa1415850:CDS | 25.0% |
! | TTGTATGTTCTATTGATCTT+TGG | + | tig0024288:50140-50159 | Msa1415850:CDS | 25.0% |
! | TTTCAACATATCTTTGACAT+TGG | + | tig0024288:50316-50335 | Msa1415850:CDS | 25.0% |
!! | TTAAACGTATGATGATAATG+GGG | - | tig0024288:50490-50509 | None:intergenic | 25.0% |
! | GTTAAACGTATGATGATAAT+GGG | - | tig0024288:50491-50510 | None:intergenic | 25.0% |
!! | TGTTTTCCAATCTCTTAATT+TGG | - | tig0024288:50722-50741 | None:intergenic | 25.0% |
! | ATGCTACTATATTTCTTCAA+TGG | + | tig0024288:50806-50825 | Msa1415850:intron | 25.0% |
! | TGCTACTATATTTCTTCAAT+GGG | + | tig0024288:50807-50826 | Msa1415850:intron | 25.0% |
!!! | AAACTTGTTCTTTTCTATCT+AGG | + | tig0024288:51270-51289 | Msa1415850:intron | 25.0% |
!! | GAATTTCACCAATCTATTTT+CGG | - | tig0024288:49168-49187 | None:intergenic | 25.0% |
! | GTATTTCAACAAACATGTAA+TGG | - | tig0024288:49214-49233 | None:intergenic | 25.0% |
! | TTAAGGTAGCTAATGTTTAT+AGG | - | tig0024288:49329-49348 | None:intergenic | 25.0% |
! | CATTAGCTACCTTAATTTAA+AGG | + | tig0024288:49334-49353 | Msa1415850:CDS | 25.0% |
! | CATAAATTCAACCAAGAATA+TGG | + | tig0024288:49980-49999 | Msa1415850:CDS | 25.0% |
! | TTGTATGTTCTATTGATCTT+TGG | + | tig0024288:50140-50159 | Msa1415850:CDS | 25.0% |
! | TTTCAACATATCTTTGACAT+TGG | + | tig0024288:50316-50335 | Msa1415850:CDS | 25.0% |
!! | TTAAACGTATGATGATAATG+GGG | - | tig0024288:50490-50509 | None:intergenic | 25.0% |
! | GTTAAACGTATGATGATAAT+GGG | - | tig0024288:50491-50510 | None:intergenic | 25.0% |
!! | TGTTTTCCAATCTCTTAATT+TGG | - | tig0024288:50722-50741 | None:intergenic | 25.0% |
! | ATGCTACTATATTTCTTCAA+TGG | + | tig0024288:50806-50825 | Msa1415850:intron | 25.0% |
! | TGCTACTATATTTCTTCAAT+GGG | + | tig0024288:50807-50826 | Msa1415850:intron | 25.0% |
!!! | AAACTTGTTCTTTTCTATCT+AGG | + | tig0024288:51270-51289 | Msa1415850:intron | 25.0% |
TAAAGGAAATTAAGCTGAGT+CGG | + | tig0024288:49351-49370 | Msa1415850:CDS | 30.0% | |
! | TCGGAATGATTTTCATATGA+AGG | + | tig0024288:49370-49389 | Msa1415850:CDS | 30.0% |
! | CGGAATGATTTTCATATGAA+GGG | + | tig0024288:49371-49390 | Msa1415850:CDS | 30.0% |
!! | CATCTTGACTGTATTTTAAG+AGG | - | tig0024288:49607-49626 | None:intergenic | 30.0% |
TACTATGTGACAGATTATCT+CGG | + | tig0024288:49734-49753 | Msa1415850:CDS | 30.0% | |
TAAGAAGCTTGATTTCATCT+AGG | - | tig0024288:49838-49857 | None:intergenic | 30.0% | |
!! | TTATGACTATTTCTACCATC+AGG | + | tig0024288:49907-49926 | Msa1415850:CDS | 30.0% |
CAATGAATAAATGTTCCTGA+TGG | - | tig0024288:49925-49944 | None:intergenic | 30.0% | |
AAATTCAACCAAGAATATGG+TGG | + | tig0024288:49983-50002 | Msa1415850:CDS | 30.0% | |
ATAGAGAAGACAGAATTATG+AGG | - | tig0024288:50112-50131 | None:intergenic | 30.0% | |
!! | CATTCGAATAATTCTGGAAT+AGG | + | tig0024288:50163-50182 | Msa1415850:CDS | 30.0% |
GGTTAAACGTATGATGATAA+TGG | - | tig0024288:50492-50511 | None:intergenic | 30.0% | |
AAGGTTCCAAATTAAGAGAT+TGG | + | tig0024288:50713-50732 | Msa1415850:intron | 30.0% | |
GTATTATTGTGAAAGACTCT+AGG | + | tig0024288:50743-50762 | Msa1415850:intron | 30.0% | |
TTTATCAAAATGAGAACTCG+AGG | + | tig0024288:50941-50960 | Msa1415850:intron | 30.0% | |
GAAAGAAATAACAAACCCAT+GGG | - | tig0024288:51098-51117 | None:intergenic | 30.0% | |
TGAAAGAAATAACAAACCCA+TGG | - | tig0024288:51099-51118 | None:intergenic | 30.0% | |
! | AATCAAAAAGTGTACCTCTT+AGG | - | tig0024288:51145-51164 | None:intergenic | 30.0% |
CGACAAACCTATCAAAATAA+GGG | - | tig0024288:51216-51235 | None:intergenic | 30.0% | |
TAAAGGAAATTAAGCTGAGT+CGG | + | tig0024288:49351-49370 | Msa1415850:CDS | 30.0% | |
! | TCGGAATGATTTTCATATGA+AGG | + | tig0024288:49370-49389 | Msa1415850:CDS | 30.0% |
! | CGGAATGATTTTCATATGAA+GGG | + | tig0024288:49371-49390 | Msa1415850:CDS | 30.0% |
!! | CATCTTGACTGTATTTTAAG+AGG | - | tig0024288:49607-49626 | None:intergenic | 30.0% |
TACTATGTGACAGATTATCT+CGG | + | tig0024288:49734-49753 | Msa1415850:CDS | 30.0% | |
TAAGAAGCTTGATTTCATCT+AGG | - | tig0024288:49838-49857 | None:intergenic | 30.0% | |
!! | TTATGACTATTTCTACCATC+AGG | + | tig0024288:49907-49926 | Msa1415850:CDS | 30.0% |
CAATGAATAAATGTTCCTGA+TGG | - | tig0024288:49925-49944 | None:intergenic | 30.0% | |
AAATTCAACCAAGAATATGG+TGG | + | tig0024288:49983-50002 | Msa1415850:CDS | 30.0% | |
ATAGAGAAGACAGAATTATG+AGG | - | tig0024288:50112-50131 | None:intergenic | 30.0% | |
!! | CATTCGAATAATTCTGGAAT+AGG | + | tig0024288:50163-50182 | Msa1415850:CDS | 30.0% |
GGTTAAACGTATGATGATAA+TGG | - | tig0024288:50492-50511 | None:intergenic | 30.0% | |
AAGGTTCCAAATTAAGAGAT+TGG | + | tig0024288:50713-50732 | Msa1415850:intron | 30.0% | |
GTATTATTGTGAAAGACTCT+AGG | + | tig0024288:50743-50762 | Msa1415850:intron | 30.0% | |
TTTATCAAAATGAGAACTCG+AGG | + | tig0024288:50941-50960 | Msa1415850:intron | 30.0% | |
GAAAGAAATAACAAACCCAT+GGG | - | tig0024288:51098-51117 | None:intergenic | 30.0% | |
TGAAAGAAATAACAAACCCA+TGG | - | tig0024288:51099-51118 | None:intergenic | 30.0% | |
! | AATCAAAAAGTGTACCTCTT+AGG | - | tig0024288:51145-51164 | None:intergenic | 30.0% |
CGACAAACCTATCAAAATAA+GGG | - | tig0024288:51216-51235 | None:intergenic | 30.0% | |
TGTGAATGTTTCGATAGTAG+TGG | - | tig0024288:49014-49033 | None:intergenic | 35.0% | |
GGTGAAATTCATCACAACAT+CGG | + | tig0024288:49178-49197 | Msa1415850:CDS | 35.0% | |
AACTTCAGAATTATGCGCAA+TGG | - | tig0024288:49258-49277 | None:intergenic | 35.0% | |
ATCTGTTTCAACAACTTCGA+TGG | - | tig0024288:49474-49493 | None:intergenic | 35.0% | |
TTGAAACAGATCTACCGAAT+GGG | + | tig0024288:49483-49502 | Msa1415850:CDS | 35.0% | |
GGAGTTCTTCACTCAAATAT+CGG | - | tig0024288:49535-49554 | None:intergenic | 35.0% | |
ATTATTATCCTCTCCATCTG+TGG | - | tig0024288:49573-49592 | None:intergenic | 35.0% | |
TTTGAGCTAAGAATTGTGCA+TGG | + | tig0024288:49641-49660 | Msa1415850:CDS | 35.0% | |
GAATTGTGCATGGAAAGAAT+AGG | + | tig0024288:49651-49670 | Msa1415850:CDS | 35.0% | |
GACTGGATTTGAAGAAAACA+AGG | + | tig0024288:49673-49692 | Msa1415850:CDS | 35.0% | |
CTTTGGCATTCGAATAATTC+TGG | + | tig0024288:50157-50176 | Msa1415850:CDS | 35.0% | |
! | ATTATTACTAGCCTAGTGAG+TGG | + | tig0024288:50208-50227 | Msa1415850:CDS | 35.0% |
! | TTATTACTAGCCTAGTGAGT+GGG | + | tig0024288:50209-50228 | Msa1415850:CDS | 35.0% |
ACTTTGAACAGCATTCAACA+TGG | - | tig0024288:50263-50282 | None:intergenic | 35.0% | |
AATGCTGTTCAAAGTCAGAT+GGG | + | tig0024288:50268-50287 | Msa1415850:CDS | 35.0% | |
CACTTGTGATTGAGACTATT+GGG | - | tig0024288:50381-50400 | None:intergenic | 35.0% | |
TCACTTGTGATTGAGACTAT+TGG | - | tig0024288:50382-50401 | None:intergenic | 35.0% | |
!! | GACAACAATTTTGATGCTTG+TGG | + | tig0024288:50400-50419 | Msa1415850:CDS | 35.0% |
ACAGAAAAGCAAGCACTTAA+TGG | + | tig0024288:50676-50695 | Msa1415850:CDS | 35.0% | |
AAAAGCAAGCACTTAATGGA+TGG | + | tig0024288:50680-50699 | Msa1415850:CDS | 35.0% | |
TAGAACTTATGTAGCCTAAG+AGG | + | tig0024288:51128-51147 | Msa1415850:intron | 35.0% | |
TCGAGAATTTCTCTCAATTC+TGG | + | tig0024288:51177-51196 | Msa1415850:intron | 35.0% | |
AGAATTTCTCTCAATTCTGG+TGG | + | tig0024288:51180-51199 | Msa1415850:intron | 35.0% | |
CCTATCAAAATAAGGGTTTC+CGG | - | tig0024288:51209-51228 | None:intergenic | 35.0% | |
GCGACAAACCTATCAAAATA+AGG | - | tig0024288:51217-51236 | None:intergenic | 35.0% | |
GCGACAAACTTGTGAAAATA+GGG | - | tig0024288:51246-51265 | None:intergenic | 35.0% | |
AGCGACAAACTTGTGAAAAT+AGG | - | tig0024288:51247-51266 | None:intergenic | 35.0% | |
GGGATGCAATACATAAAGTA+TGG | + | tig0024288:51335-51354 | Msa1415850:intron | 35.0% | |
TGTGAATGTTTCGATAGTAG+TGG | - | tig0024288:49014-49033 | None:intergenic | 35.0% | |
GGTGAAATTCATCACAACAT+CGG | + | tig0024288:49178-49197 | Msa1415850:CDS | 35.0% | |
AACTTCAGAATTATGCGCAA+TGG | - | tig0024288:49258-49277 | None:intergenic | 35.0% | |
ATCTGTTTCAACAACTTCGA+TGG | - | tig0024288:49474-49493 | None:intergenic | 35.0% | |
TTGAAACAGATCTACCGAAT+GGG | + | tig0024288:49483-49502 | Msa1415850:CDS | 35.0% | |
GGAGTTCTTCACTCAAATAT+CGG | - | tig0024288:49535-49554 | None:intergenic | 35.0% | |
ATTATTATCCTCTCCATCTG+TGG | - | tig0024288:49573-49592 | None:intergenic | 35.0% | |
TTTGAGCTAAGAATTGTGCA+TGG | + | tig0024288:49641-49660 | Msa1415850:CDS | 35.0% | |
GAATTGTGCATGGAAAGAAT+AGG | + | tig0024288:49651-49670 | Msa1415850:CDS | 35.0% | |
GACTGGATTTGAAGAAAACA+AGG | + | tig0024288:49673-49692 | Msa1415850:CDS | 35.0% | |
CTTTGGCATTCGAATAATTC+TGG | + | tig0024288:50157-50176 | Msa1415850:CDS | 35.0% | |
! | ATTATTACTAGCCTAGTGAG+TGG | + | tig0024288:50208-50227 | Msa1415850:CDS | 35.0% |
! | TTATTACTAGCCTAGTGAGT+GGG | + | tig0024288:50209-50228 | Msa1415850:CDS | 35.0% |
ACTTTGAACAGCATTCAACA+TGG | - | tig0024288:50263-50282 | None:intergenic | 35.0% | |
AATGCTGTTCAAAGTCAGAT+GGG | + | tig0024288:50268-50287 | Msa1415850:CDS | 35.0% | |
CACTTGTGATTGAGACTATT+GGG | - | tig0024288:50381-50400 | None:intergenic | 35.0% | |
TCACTTGTGATTGAGACTAT+TGG | - | tig0024288:50382-50401 | None:intergenic | 35.0% | |
!! | GACAACAATTTTGATGCTTG+TGG | + | tig0024288:50400-50419 | Msa1415850:CDS | 35.0% |
ACAGAAAAGCAAGCACTTAA+TGG | + | tig0024288:50676-50695 | Msa1415850:CDS | 35.0% | |
AAAAGCAAGCACTTAATGGA+TGG | + | tig0024288:50680-50699 | Msa1415850:CDS | 35.0% | |
TAGAACTTATGTAGCCTAAG+AGG | + | tig0024288:51128-51147 | Msa1415850:intron | 35.0% | |
TCGAGAATTTCTCTCAATTC+TGG | + | tig0024288:51177-51196 | Msa1415850:intron | 35.0% | |
AGAATTTCTCTCAATTCTGG+TGG | + | tig0024288:51180-51199 | Msa1415850:intron | 35.0% | |
CCTATCAAAATAAGGGTTTC+CGG | - | tig0024288:51209-51228 | None:intergenic | 35.0% | |
GCGACAAACCTATCAAAATA+AGG | - | tig0024288:51217-51236 | None:intergenic | 35.0% | |
GCGACAAACTTGTGAAAATA+GGG | - | tig0024288:51246-51265 | None:intergenic | 35.0% | |
AGCGACAAACTTGTGAAAAT+AGG | - | tig0024288:51247-51266 | None:intergenic | 35.0% | |
GGGATGCAATACATAAAGTA+TGG | + | tig0024288:51335-51354 | Msa1415850:intron | 35.0% | |
ATCTTCTGATAGCTTCGATC+CGG | - | tig0024288:49080-49099 | None:intergenic | 40.0% | |
AAGCTATCAGAAGATTCTCG+TGG | + | tig0024288:49085-49104 | Msa1415850:CDS | 40.0% | |
!!! | AATCTATTTTCGGTGTCTGG+TGG | - | tig0024288:49158-49177 | None:intergenic | 40.0% |
ACCAGACACCGAAAATAGAT+TGG | + | tig0024288:49157-49176 | Msa1415850:CDS | 40.0% | |
!!! | ACCAATCTATTTTCGGTGTC+TGG | - | tig0024288:49161-49180 | None:intergenic | 40.0% |
GCAATCTGAACTATGCTTCA+TGG | - | tig0024288:49429-49448 | None:intergenic | 40.0% | |
GCATAGTTCAGATTGCTACA+AGG | + | tig0024288:49433-49452 | Msa1415850:CDS | 40.0% | |
GTTGAAACAGATCTACCGAA+TGG | + | tig0024288:49482-49501 | Msa1415850:CDS | 40.0% | |
CCATTGCTTTCAATCCCATT+CGG | - | tig0024288:49500-49519 | None:intergenic | 40.0% | |
AGTCATAAAGACGCAGTATG+TGG | - | tig0024288:49895-49914 | None:intergenic | 40.0% | |
TAAGTTTGCACGCAGAAGTT+CGG | - | tig0024288:49951-49970 | None:intergenic | 40.0% | |
ATGCTTCACCACCATATTCT+TGG | - | tig0024288:49994-50013 | None:intergenic | 40.0% | |
CATTACTCGACAGTGTTTAG+AGG | + | tig0024288:50039-50058 | Msa1415850:CDS | 40.0% | |
AGACAGAATTATGAGGCTTC+AGG | - | tig0024288:50105-50124 | None:intergenic | 40.0% | |
AGACTTGTACGTGAAAGAGT+TGG | + | tig0024288:50232-50251 | Msa1415850:CDS | 40.0% | |
GAATGCTGTTCAAAGTCAGA+TGG | + | tig0024288:50267-50286 | Msa1415850:CDS | 40.0% | |
TTTGACATTGGATGTGACAG+AGG | + | tig0024288:50328-50347 | Msa1415850:CDS | 40.0% | |
TTCCTGTTCAATTTGCCTTC+AGG | + | tig0024288:50432-50451 | Msa1415850:CDS | 40.0% | |
ATCCTGAAGGCAAATTGAAC+AGG | - | tig0024288:50437-50456 | None:intergenic | 40.0% | |
TTGCCTTCAGGATTTCCAAA+TGG | + | tig0024288:50444-50463 | Msa1415850:CDS | 40.0% | |
TGCCTTCAGGATTTCCAAAT+GGG | + | tig0024288:50445-50464 | Msa1415850:CDS | 40.0% | |
TTCTAACAGTCTCTCCCATT+TGG | - | tig0024288:50462-50481 | None:intergenic | 40.0% | |
ACTTGCACACAACTAAGTGT+AGG | - | tig0024288:50642-50661 | None:intergenic | 40.0% | |
! | TGTGCAAGTGTGGTTTTTGT+GGG | + | tig0024288:50653-50672 | Msa1415850:CDS | 40.0% |
AATGGATGGCAACAACACAA+AGG | + | tig0024288:50694-50713 | Msa1415850:CDS | 40.0% | |
TTCACCATCCATTGTTCTAG+AGG | - | tig0024288:50772-50791 | None:intergenic | 40.0% | |
! | TCTAGAACAATGGATGGTGA+AGG | + | tig0024288:50771-50790 | Msa1415850:intron | 40.0% |
ATCCTCGCATTTCACTCAAT+GGG | + | tig0024288:50864-50883 | Msa1415850:intron | 40.0% | |
ATTGGAGGAGTAAACATGCA+TGG | + | tig0024288:50911-50930 | Msa1415850:intron | 40.0% | |
TTGGAGGAGTAAACATGCAT+GGG | + | tig0024288:50912-50931 | Msa1415850:intron | 40.0% | |
!!! | CCGGAAACCCTTATTTTGAT+AGG | + | tig0024288:51206-51225 | Msa1415850:intron | 40.0% |
ATCTTCTGATAGCTTCGATC+CGG | - | tig0024288:49080-49099 | None:intergenic | 40.0% | |
AAGCTATCAGAAGATTCTCG+TGG | + | tig0024288:49085-49104 | Msa1415850:CDS | 40.0% | |
!!! | AATCTATTTTCGGTGTCTGG+TGG | - | tig0024288:49158-49177 | None:intergenic | 40.0% |
ACCAGACACCGAAAATAGAT+TGG | + | tig0024288:49157-49176 | Msa1415850:CDS | 40.0% | |
!!! | ACCAATCTATTTTCGGTGTC+TGG | - | tig0024288:49161-49180 | None:intergenic | 40.0% |
GCAATCTGAACTATGCTTCA+TGG | - | tig0024288:49429-49448 | None:intergenic | 40.0% | |
GCATAGTTCAGATTGCTACA+AGG | + | tig0024288:49433-49452 | Msa1415850:CDS | 40.0% | |
GTTGAAACAGATCTACCGAA+TGG | + | tig0024288:49482-49501 | Msa1415850:CDS | 40.0% | |
CCATTGCTTTCAATCCCATT+CGG | - | tig0024288:49500-49519 | None:intergenic | 40.0% | |
AGTCATAAAGACGCAGTATG+TGG | - | tig0024288:49895-49914 | None:intergenic | 40.0% | |
TAAGTTTGCACGCAGAAGTT+CGG | - | tig0024288:49951-49970 | None:intergenic | 40.0% | |
ATGCTTCACCACCATATTCT+TGG | - | tig0024288:49994-50013 | None:intergenic | 40.0% | |
CATTACTCGACAGTGTTTAG+AGG | + | tig0024288:50039-50058 | Msa1415850:CDS | 40.0% | |
AGACAGAATTATGAGGCTTC+AGG | - | tig0024288:50105-50124 | None:intergenic | 40.0% | |
AGACTTGTACGTGAAAGAGT+TGG | + | tig0024288:50232-50251 | Msa1415850:CDS | 40.0% | |
GAATGCTGTTCAAAGTCAGA+TGG | + | tig0024288:50267-50286 | Msa1415850:CDS | 40.0% | |
TTTGACATTGGATGTGACAG+AGG | + | tig0024288:50328-50347 | Msa1415850:CDS | 40.0% | |
TTCCTGTTCAATTTGCCTTC+AGG | + | tig0024288:50432-50451 | Msa1415850:CDS | 40.0% | |
ATCCTGAAGGCAAATTGAAC+AGG | - | tig0024288:50437-50456 | None:intergenic | 40.0% | |
TTGCCTTCAGGATTTCCAAA+TGG | + | tig0024288:50444-50463 | Msa1415850:CDS | 40.0% | |
TGCCTTCAGGATTTCCAAAT+GGG | + | tig0024288:50445-50464 | Msa1415850:CDS | 40.0% | |
TTCTAACAGTCTCTCCCATT+TGG | - | tig0024288:50462-50481 | None:intergenic | 40.0% | |
ACTTGCACACAACTAAGTGT+AGG | - | tig0024288:50642-50661 | None:intergenic | 40.0% | |
! | TGTGCAAGTGTGGTTTTTGT+GGG | + | tig0024288:50653-50672 | Msa1415850:CDS | 40.0% |
AATGGATGGCAACAACACAA+AGG | + | tig0024288:50694-50713 | Msa1415850:CDS | 40.0% | |
TTCACCATCCATTGTTCTAG+AGG | - | tig0024288:50772-50791 | None:intergenic | 40.0% | |
! | TCTAGAACAATGGATGGTGA+AGG | + | tig0024288:50771-50790 | Msa1415850:intron | 40.0% |
ATCCTCGCATTTCACTCAAT+GGG | + | tig0024288:50864-50883 | Msa1415850:intron | 40.0% | |
ATTGGAGGAGTAAACATGCA+TGG | + | tig0024288:50911-50930 | Msa1415850:intron | 40.0% | |
TTGGAGGAGTAAACATGCAT+GGG | + | tig0024288:50912-50931 | Msa1415850:intron | 40.0% | |
!!! | CCGGAAACCCTTATTTTGAT+AGG | + | tig0024288:51206-51225 | Msa1415850:intron | 40.0% |
ATGCGCAATGGCTTCTTTCT+CGG | - | tig0024288:49246-49265 | None:intergenic | 45.0% | |
!! | CCTGGACTGCTTTTGCAAAA+TGG | - | tig0024288:49281-49300 | None:intergenic | 45.0% |
! | CCATTTTGCAAAAGCAGTCC+AGG | + | tig0024288:49278-49297 | Msa1415850:CDS | 45.0% |
GTTCAGCAGGTTCTTGTAGT+GGG | + | tig0024288:49300-49319 | Msa1415850:CDS | 45.0% | |
TTCAGCAGGTTCTTGTAGTG+GGG | + | tig0024288:49301-49320 | Msa1415850:CDS | 45.0% | |
CCGAATGGGATTGAAAGCAA+TGG | + | tig0024288:49497-49516 | Msa1415850:CDS | 45.0% | |
GGGATTGAAAGCAATGGAGT+AGG | + | tig0024288:49503-49522 | Msa1415850:CDS | 45.0% | |
GAGTGAAGAACTCCATGTTC+CGG | + | tig0024288:49541-49560 | Msa1415850:CDS | 45.0% | |
GTGCATGGAAAGAATAGGAC+TGG | + | tig0024288:49656-49675 | Msa1415850:CDS | 45.0% | |
!! | AGTGCTGATTGTGCTGAACA+CGG | + | tig0024288:49697-49716 | Msa1415850:CDS | 45.0% |
AGTATGTGGCGTTTATCTCC+CGG | - | tig0024288:49881-49900 | None:intergenic | 45.0% | |
CTCCCATTTGGAAATCCTGA+AGG | - | tig0024288:50450-50469 | None:intergenic | 45.0% | |
! | ACCTACCTTGCATTGACAAG+TGG | + | tig0024288:50509-50528 | Msa1415850:CDS | 45.0% |
ATGAGCCACTTGTCAATGCA+AGG | - | tig0024288:50517-50536 | None:intergenic | 45.0% | |
GCTCACTGTCTCTGCATAAT+GGG | - | tig0024288:50555-50574 | None:intergenic | 45.0% | |
TGCTCACTGTCTCTGCATAA+TGG | - | tig0024288:50556-50575 | None:intergenic | 45.0% | |
CACACAACTAAGTGTAGGCT+TGG | - | tig0024288:50637-50656 | None:intergenic | 45.0% | |
CACTTAGTTGTGTGCAAGTG+TGG | + | tig0024288:50643-50662 | Msa1415850:CDS | 45.0% | |
! | GTGTGCAAGTGTGGTTTTTG+TGG | + | tig0024288:50652-50671 | Msa1415850:CDS | 45.0% |
!! | CTAGGCTACCTCTAGAACAA+TGG | + | tig0024288:50761-50780 | Msa1415850:intron | 45.0% |
!! | GCTACCTCTAGAACAATGGA+TGG | + | tig0024288:50765-50784 | Msa1415850:intron | 45.0% |
CATCCTCGCATTTCACTCAA+TGG | + | tig0024288:50863-50882 | Msa1415850:intron | 45.0% | |
ATCCCATTGAGTGAAATGCG+AGG | - | tig0024288:50869-50888 | None:intergenic | 45.0% | |
CATTTCACTCAATGGGATCC+AGG | + | tig0024288:50871-50890 | Msa1415850:intron | 45.0% | |
!! | CTCTCAATTCTGGTGGATTC+CGG | + | tig0024288:51187-51206 | Msa1415850:intron | 45.0% |
CTTCCGTACTGCGTCAATAT+GGG | + | tig0024288:51315-51334 | Msa1415850:intron | 45.0% | |
CATCCCATATTGACGCAGTA+CGG | - | tig0024288:51321-51340 | None:intergenic | 45.0% | |
ATGCGCAATGGCTTCTTTCT+CGG | - | tig0024288:49246-49265 | None:intergenic | 45.0% | |
!! | CCTGGACTGCTTTTGCAAAA+TGG | - | tig0024288:49281-49300 | None:intergenic | 45.0% |
! | CCATTTTGCAAAAGCAGTCC+AGG | + | tig0024288:49278-49297 | Msa1415850:CDS | 45.0% |
GTTCAGCAGGTTCTTGTAGT+GGG | + | tig0024288:49300-49319 | Msa1415850:CDS | 45.0% | |
TTCAGCAGGTTCTTGTAGTG+GGG | + | tig0024288:49301-49320 | Msa1415850:CDS | 45.0% | |
CCGAATGGGATTGAAAGCAA+TGG | + | tig0024288:49497-49516 | Msa1415850:CDS | 45.0% | |
GGGATTGAAAGCAATGGAGT+AGG | + | tig0024288:49503-49522 | Msa1415850:CDS | 45.0% | |
GAGTGAAGAACTCCATGTTC+CGG | + | tig0024288:49541-49560 | Msa1415850:CDS | 45.0% | |
GTGCATGGAAAGAATAGGAC+TGG | + | tig0024288:49656-49675 | Msa1415850:CDS | 45.0% | |
!! | AGTGCTGATTGTGCTGAACA+CGG | + | tig0024288:49697-49716 | Msa1415850:CDS | 45.0% |
AGTATGTGGCGTTTATCTCC+CGG | - | tig0024288:49881-49900 | None:intergenic | 45.0% | |
CTCCCATTTGGAAATCCTGA+AGG | - | tig0024288:50450-50469 | None:intergenic | 45.0% | |
! | ACCTACCTTGCATTGACAAG+TGG | + | tig0024288:50509-50528 | Msa1415850:CDS | 45.0% |
ATGAGCCACTTGTCAATGCA+AGG | - | tig0024288:50517-50536 | None:intergenic | 45.0% | |
GCTCACTGTCTCTGCATAAT+GGG | - | tig0024288:50555-50574 | None:intergenic | 45.0% | |
TGCTCACTGTCTCTGCATAA+TGG | - | tig0024288:50556-50575 | None:intergenic | 45.0% | |
CACACAACTAAGTGTAGGCT+TGG | - | tig0024288:50637-50656 | None:intergenic | 45.0% | |
CACTTAGTTGTGTGCAAGTG+TGG | + | tig0024288:50643-50662 | Msa1415850:CDS | 45.0% | |
! | GTGTGCAAGTGTGGTTTTTG+TGG | + | tig0024288:50652-50671 | Msa1415850:CDS | 45.0% |
!! | CTAGGCTACCTCTAGAACAA+TGG | + | tig0024288:50761-50780 | Msa1415850:intron | 45.0% |
!! | GCTACCTCTAGAACAATGGA+TGG | + | tig0024288:50765-50784 | Msa1415850:intron | 45.0% |
CATCCTCGCATTTCACTCAA+TGG | + | tig0024288:50863-50882 | Msa1415850:intron | 45.0% | |
ATCCCATTGAGTGAAATGCG+AGG | - | tig0024288:50869-50888 | None:intergenic | 45.0% | |
CATTTCACTCAATGGGATCC+AGG | + | tig0024288:50871-50890 | Msa1415850:intron | 45.0% | |
!! | CTCTCAATTCTGGTGGATTC+CGG | + | tig0024288:51187-51206 | Msa1415850:intron | 45.0% |
CTTCCGTACTGCGTCAATAT+GGG | + | tig0024288:51315-51334 | Msa1415850:intron | 45.0% | |
CATCCCATATTGACGCAGTA+CGG | - | tig0024288:51321-51340 | None:intergenic | 45.0% | |
AGAGTCGGAGTGAAAACACG+TGG | - | tig0024288:49038-49057 | None:intergenic | 50.0% | |
TAGCTTCGATCCGGAGGTTT+GGG | - | tig0024288:49071-49090 | None:intergenic | 50.0% | |
ATAGCTTCGATCCGGAGGTT+TGG | - | tig0024288:49072-49091 | None:intergenic | 50.0% | |
TTCTGATAGCTTCGATCCGG+AGG | - | tig0024288:49077-49096 | None:intergenic | 50.0% | |
AAAAGCAGTCCAGGTTCAGC+AGG | + | tig0024288:49287-49306 | Msa1415850:CDS | 50.0% | |
CTACAAGAACCTGCTGAACC+TGG | - | tig0024288:49299-49318 | None:intergenic | 50.0% | |
GGTTCAGCAGGTTCTTGTAG+TGG | + | tig0024288:49299-49318 | Msa1415850:CDS | 50.0% | |
TGAAGAACTCCATGTTCCGG+AGG | + | tig0024288:49544-49563 | Msa1415850:CDS | 50.0% | |
GATTGTGCTGAACACGGTCA+TGG | + | tig0024288:49703-49722 | Msa1415850:CDS | 50.0% | |
TGAACACGGTCATGGCTGAA+AGG | + | tig0024288:49711-49730 | Msa1415850:CDS | 50.0% | |
TCGGTTCAGCTACCTTCAGT+AGG | + | tig0024288:49753-49772 | Msa1415850:CDS | 50.0% | |
CGGTTCAGCTACCTTCAGTA+GGG | + | tig0024288:49754-49773 | Msa1415850:CDS | 50.0% | |
!! | ATCGAGAGCATCCCTACTGA+AGG | - | tig0024288:49768-49787 | None:intergenic | 50.0% |
TTCAGTAGGGATGCTCTCGA+TGG | + | tig0024288:49767-49786 | Msa1415850:CDS | 50.0% | |
ACTTGTCGATAAGCACGACC+CGG | + | tig0024288:49859-49878 | Msa1415850:CDS | 50.0% | |
GTATGTGGCGTTTATCTCCC+GGG | - | tig0024288:49880-49899 | None:intergenic | 50.0% | |
GTACAAGTCTCCCACTCACT+AGG | - | tig0024288:50222-50241 | None:intergenic | 50.0% | |
GTTCAAAGTCAGATGGGTGC+AGG | + | tig0024288:50274-50293 | Msa1415850:CDS | 50.0% | |
GGATGTGACAGAGGCTTACT+AGG | + | tig0024288:50337-50356 | Msa1415850:CDS | 50.0% | |
GCCACTTGTCAATGCAAGGT+AGG | - | tig0024288:50513-50532 | None:intergenic | 50.0% | |
GACAAGTGGCTCATCAAGCA+TGG | + | tig0024288:50523-50542 | Msa1415850:CDS | 50.0% | |
TTCACTCAATGGGATCCAGG+AGG | + | tig0024288:50874-50893 | Msa1415850:intron | 50.0% | |
TCACTCAATGGGATCCAGGA+GGG | + | tig0024288:50875-50894 | Msa1415850:intron | 50.0% | |
GAGGGTGGTCTCTTGTTCAT+TGG | + | tig0024288:50893-50912 | Msa1415850:intron | 50.0% | |
GGTGGTCTCTTGTTCATTGG+AGG | + | tig0024288:50896-50915 | Msa1415850:intron | 50.0% | |
TGGAAGAGACTGATGCAGGA+GGG | + | tig0024288:50980-50999 | Msa1415850:intron | 50.0% | |
TGACGCAGTACGGAAGCTTA+GGG | - | tig0024288:51311-51330 | None:intergenic | 50.0% | |
TTGACGCAGTACGGAAGCTT+AGG | - | tig0024288:51312-51331 | None:intergenic | 50.0% | |
GCTTCCGTACTGCGTCAATA+TGG | + | tig0024288:51314-51333 | Msa1415850:intron | 50.0% | |
AGAGTCGGAGTGAAAACACG+TGG | - | tig0024288:49038-49057 | None:intergenic | 50.0% | |
TAGCTTCGATCCGGAGGTTT+GGG | - | tig0024288:49071-49090 | None:intergenic | 50.0% | |
ATAGCTTCGATCCGGAGGTT+TGG | - | tig0024288:49072-49091 | None:intergenic | 50.0% | |
TTCTGATAGCTTCGATCCGG+AGG | - | tig0024288:49077-49096 | None:intergenic | 50.0% | |
AAAAGCAGTCCAGGTTCAGC+AGG | + | tig0024288:49287-49306 | Msa1415850:CDS | 50.0% | |
CTACAAGAACCTGCTGAACC+TGG | - | tig0024288:49299-49318 | None:intergenic | 50.0% | |
GGTTCAGCAGGTTCTTGTAG+TGG | + | tig0024288:49299-49318 | Msa1415850:CDS | 50.0% | |
TGAAGAACTCCATGTTCCGG+AGG | + | tig0024288:49544-49563 | Msa1415850:CDS | 50.0% | |
GATTGTGCTGAACACGGTCA+TGG | + | tig0024288:49703-49722 | Msa1415850:CDS | 50.0% | |
TGAACACGGTCATGGCTGAA+AGG | + | tig0024288:49711-49730 | Msa1415850:CDS | 50.0% | |
TCGGTTCAGCTACCTTCAGT+AGG | + | tig0024288:49753-49772 | Msa1415850:CDS | 50.0% | |
CGGTTCAGCTACCTTCAGTA+GGG | + | tig0024288:49754-49773 | Msa1415850:CDS | 50.0% | |
!! | ATCGAGAGCATCCCTACTGA+AGG | - | tig0024288:49768-49787 | None:intergenic | 50.0% |
TTCAGTAGGGATGCTCTCGA+TGG | + | tig0024288:49767-49786 | Msa1415850:CDS | 50.0% | |
ACTTGTCGATAAGCACGACC+CGG | + | tig0024288:49859-49878 | Msa1415850:CDS | 50.0% | |
GTATGTGGCGTTTATCTCCC+GGG | - | tig0024288:49880-49899 | None:intergenic | 50.0% | |
GTACAAGTCTCCCACTCACT+AGG | - | tig0024288:50222-50241 | None:intergenic | 50.0% | |
GTTCAAAGTCAGATGGGTGC+AGG | + | tig0024288:50274-50293 | Msa1415850:CDS | 50.0% | |
GGATGTGACAGAGGCTTACT+AGG | + | tig0024288:50337-50356 | Msa1415850:CDS | 50.0% | |
GCCACTTGTCAATGCAAGGT+AGG | - | tig0024288:50513-50532 | None:intergenic | 50.0% | |
GACAAGTGGCTCATCAAGCA+TGG | + | tig0024288:50523-50542 | Msa1415850:CDS | 50.0% | |
TTCACTCAATGGGATCCAGG+AGG | + | tig0024288:50874-50893 | Msa1415850:intron | 50.0% | |
TCACTCAATGGGATCCAGGA+GGG | + | tig0024288:50875-50894 | Msa1415850:intron | 50.0% | |
GAGGGTGGTCTCTTGTTCAT+TGG | + | tig0024288:50893-50912 | Msa1415850:intron | 50.0% | |
GGTGGTCTCTTGTTCATTGG+AGG | + | tig0024288:50896-50915 | Msa1415850:intron | 50.0% | |
TGGAAGAGACTGATGCAGGA+GGG | + | tig0024288:50980-50999 | Msa1415850:intron | 50.0% | |
TGACGCAGTACGGAAGCTTA+GGG | - | tig0024288:51311-51330 | None:intergenic | 50.0% | |
TTGACGCAGTACGGAAGCTT+AGG | - | tig0024288:51312-51331 | None:intergenic | 50.0% | |
GCTTCCGTACTGCGTCAATA+TGG | + | tig0024288:51314-51333 | Msa1415850:intron | 50.0% | |
!!! | TTTTCGGTGTCTGGTGGTGC+AGG | - | tig0024288:49152-49171 | None:intergenic | 55.0% |
! | GCTTCTTTCTCGGCACTGAG+GGG | - | tig0024288:49236-49255 | None:intergenic | 55.0% |
! | GGCTTCTTTCTCGGCACTGA+GGG | - | tig0024288:49237-49256 | None:intergenic | 55.0% |
TGGCTTCTTTCTCGGCACTG+AGG | - | tig0024288:49238-49257 | None:intergenic | 55.0% | |
CTTGTCGATAAGCACGACCC+GGG | + | tig0024288:49860-49879 | Msa1415850:CDS | 55.0% | |
TGAACAAGAGACCACCCTCC+TGG | - | tig0024288:50892-50911 | None:intergenic | 55.0% | |
CTCGAGGTCGAGTTCTTCAG+AGG | + | tig0024288:50957-50976 | Msa1415850:intron | 55.0% | |
GAGGTCGAGTTCTTCAGAGG+TGG | + | tig0024288:50960-50979 | Msa1415850:intron | 55.0% | |
GAGGTGGAAGAGACTGATGC+AGG | + | tig0024288:50976-50995 | Msa1415850:intron | 55.0% | |
GTGGAAGAGACTGATGCAGG+AGG | + | tig0024288:50979-50998 | Msa1415850:intron | 55.0% | |
!!! | TTTTCGGTGTCTGGTGGTGC+AGG | - | tig0024288:49152-49171 | None:intergenic | 55.0% |
! | GCTTCTTTCTCGGCACTGAG+GGG | - | tig0024288:49236-49255 | None:intergenic | 55.0% |
! | GGCTTCTTTCTCGGCACTGA+GGG | - | tig0024288:49237-49256 | None:intergenic | 55.0% |
TGGCTTCTTTCTCGGCACTG+AGG | - | tig0024288:49238-49257 | None:intergenic | 55.0% | |
CTTGTCGATAAGCACGACCC+GGG | + | tig0024288:49860-49879 | Msa1415850:CDS | 55.0% | |
TGAACAAGAGACCACCCTCC+TGG | - | tig0024288:50892-50911 | None:intergenic | 55.0% | |
CTCGAGGTCGAGTTCTTCAG+AGG | + | tig0024288:50957-50976 | Msa1415850:intron | 55.0% | |
GAGGTCGAGTTCTTCAGAGG+TGG | + | tig0024288:50960-50979 | Msa1415850:intron | 55.0% | |
GAGGTGGAAGAGACTGATGC+AGG | + | tig0024288:50976-50995 | Msa1415850:intron | 55.0% | |
GTGGAAGAGACTGATGCAGG+AGG | + | tig0024288:50979-50998 | Msa1415850:intron | 55.0% | |
! | TTGGGTAGTGGCGGCAGAGT+CGG | - | tig0024288:49053-49072 | None:intergenic | 60.0% |
! | TCCGGAGGTTTGGGTAGTGG+CGG | - | tig0024288:49062-49081 | None:intergenic | 60.0% |
CGATCCGGAGGTTTGGGTAG+TGG | - | tig0024288:49065-49084 | None:intergenic | 60.0% | |
! | TGCAGGAAGTGGTGGAGGCA+AGG | - | tig0024288:49135-49154 | None:intergenic | 60.0% |
! | TCTGGTGGTGCAGGAAGTGG+TGG | - | tig0024288:49143-49162 | None:intergenic | 60.0% |
! | GTGTCTGGTGGTGCAGGAAG+TGG | - | tig0024288:49146-49165 | None:intergenic | 60.0% |
TCTCCATCTGTGGCAGCCTC+CGG | - | tig0024288:49563-49582 | None:intergenic | 60.0% | |
CTCAATGGGATCCAGGAGGG+TGG | + | tig0024288:50878-50897 | Msa1415850:intron | 60.0% | |
! | TTGGGTAGTGGCGGCAGAGT+CGG | - | tig0024288:49053-49072 | None:intergenic | 60.0% |
! | TCCGGAGGTTTGGGTAGTGG+CGG | - | tig0024288:49062-49081 | None:intergenic | 60.0% |
CGATCCGGAGGTTTGGGTAG+TGG | - | tig0024288:49065-49084 | None:intergenic | 60.0% | |
! | TGCAGGAAGTGGTGGAGGCA+AGG | - | tig0024288:49135-49154 | None:intergenic | 60.0% |
! | TCTGGTGGTGCAGGAAGTGG+TGG | - | tig0024288:49143-49162 | None:intergenic | 60.0% |
! | GTGTCTGGTGGTGCAGGAAG+TGG | - | tig0024288:49146-49165 | None:intergenic | 60.0% |
TCTCCATCTGTGGCAGCCTC+CGG | - | tig0024288:49563-49582 | None:intergenic | 60.0% | |
CTCAATGGGATCCAGGAGGG+TGG | + | tig0024288:50878-50897 | Msa1415850:intron | 60.0% | |
GCCGCCACTACCCAAACCTC+CGG | + | tig0024288:49058-49077 | Msa1415850:CDS | 65.0% | |
GGTGGTGCAGGAAGTGGTGG+AGG | - | tig0024288:49140-49159 | None:intergenic | 65.0% | |
CTGTGGCAGCCTCCGGAACA+TGG | - | tig0024288:49556-49575 | None:intergenic | 65.0% | |
GTTCCGGAGGCTGCCACAGA+TGG | + | tig0024288:49557-49576 | Msa1415850:CDS | 65.0% | |
GGAGGCTGCCACAGATGGAG+AGG | + | tig0024288:49562-49581 | Msa1415850:CDS | 65.0% | |
GTTGCTGCAGCAGCTCACGC+CGG | + | tig0024288:51389-51408 | Msa1415850:intron | 65.0% | |
TTGCTGCAGCAGCTCACGCC+GGG | + | tig0024288:51390-51409 | Msa1415850:intron | 65.0% | |
GCCGCCACTACCCAAACCTC+CGG | + | tig0024288:49058-49077 | Msa1415850:CDS | 65.0% | |
GGTGGTGCAGGAAGTGGTGG+AGG | - | tig0024288:49140-49159 | None:intergenic | 65.0% | |
CTGTGGCAGCCTCCGGAACA+TGG | - | tig0024288:49556-49575 | None:intergenic | 65.0% | |
GTTCCGGAGGCTGCCACAGA+TGG | + | tig0024288:49557-49576 | Msa1415850:CDS | 65.0% | |
GGAGGCTGCCACAGATGGAG+AGG | + | tig0024288:49562-49581 | Msa1415850:CDS | 65.0% | |
GTTGCTGCAGCAGCTCACGC+CGG | + | tig0024288:51389-51408 | Msa1415850:intron | 65.0% | |
TTGCTGCAGCAGCTCACGCC+GGG | + | tig0024288:51390-51409 | Msa1415850:intron | 65.0% | |
TGCTGCAGCAGCTCACGCCG+GGG | + | tig0024288:51391-51410 | Msa1415850:intron | 70.0% | |
TGCTGCAGCAGCTCACGCCG+GGG | + | tig0024288:51391-51410 | Msa1415850:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0024288 | gene | 48981 | 51418 | 48981 | ID=Msa1415850;Name=Msa1415850 |
tig0024288 | mRNA | 48981 | 51418 | 48981 | ID=Msa1415850-mRNA-1;Parent=Msa1415850;Name=Msa1415850-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0|0|0.5|1|1|2|0|584 |
tig0024288 | exon | 48981 | 50715 | 48981 | ID=Msa1415850-mRNA-1:exon:22638;Parent=Msa1415850-mRNA-1 |
tig0024288 | exon | 51399 | 51418 | 51399 | ID=Msa1415850-mRNA-1:exon:22639;Parent=Msa1415850-mRNA-1 |
tig0024288 | CDS | 48981 | 50715 | 48981 | ID=Msa1415850-mRNA-1:cds;Parent=Msa1415850-mRNA-1 |
tig0024288 | CDS | 51399 | 51418 | 51399 | ID=Msa1415850-mRNA-1:cds;Parent=Msa1415850-mRNA-1 |
Gene Sequence |
Protein sequence |