Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417910 | sp|O82799|NGA1_ARATH | 43.642 | 346 | 75 | 13 | 53 | 377 | 6 | 252 | 3.29e-69 | 224 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417910 | A0A072U667 | 80.851 | 423 | 49 | 10 | 14 | 431 | 62 | 457 | 0.0 | 568 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1417910 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417910 | MtrunA17_Chr7g0276471 | 80.851 | 423 | 49 | 10 | 14 | 431 | 62 | 457 | 0.0 | 568 |
| Msa1417910 | MtrunA17_Chr8g0345771 | 41.410 | 454 | 180 | 15 | 3 | 423 | 108 | 508 | 2.90e-90 | 283 |
| Msa1417910 | MtrunA17_Chr1g0178071 | 64.179 | 134 | 41 | 3 | 54 | 182 | 50 | 181 | 3.81e-49 | 170 |
| Msa1417910 | MtrunA17_Chr7g0266821 | 74.257 | 101 | 23 | 2 | 81 | 181 | 65 | 162 | 8.33e-46 | 160 |
| Msa1417910 | MtrunA17_Chr5g0422501 | 65.812 | 117 | 30 | 2 | 73 | 181 | 232 | 346 | 1.12e-44 | 160 |
| Msa1417910 | MtrunA17_Chr1g0198661 | 61.789 | 123 | 32 | 2 | 73 | 182 | 188 | 308 | 8.37e-43 | 154 |
| Msa1417910 | MtrunA17_Chr1g0213701 | 47.107 | 121 | 52 | 2 | 44 | 164 | 138 | 246 | 8.89e-29 | 114 |
| Msa1417910 | MtrunA17_Chr2g0282961 | 39.091 | 110 | 66 | 1 | 57 | 165 | 138 | 247 | 5.62e-15 | 77.0 |
| Msa1417910 | MtrunA17_Chr4g0012861 | 40.659 | 91 | 49 | 3 | 76 | 164 | 314 | 401 | 2.78e-14 | 75.1 |
| Msa1417910 | MtrunA17_Chr5g0432721 | 38.462 | 91 | 51 | 3 | 76 | 164 | 321 | 408 | 5.21e-14 | 74.3 |
| Msa1417910 | MtrunA17_Chr2g0281191 | 38.679 | 106 | 57 | 4 | 76 | 179 | 352 | 451 | 1.41e-13 | 73.2 |
| Msa1417910 | MtrunA17_Chr3g0107701 | 40.659 | 91 | 49 | 3 | 76 | 164 | 338 | 425 | 1.45e-13 | 72.8 |
| Msa1417910 | MtrunA17_Chr4g0046371 | 39.000 | 100 | 60 | 1 | 67 | 165 | 138 | 237 | 8.69e-13 | 70.5 |
| Msa1417910 | MtrunA17_Chr7g0244871 | 38.889 | 90 | 50 | 3 | 76 | 163 | 12 | 98 | 8.81e-13 | 64.3 |
| Msa1417910 | MtrunA17_Chr4g0029671 | 36.111 | 108 | 68 | 1 | 75 | 181 | 164 | 271 | 3.23e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417910 | AT2G46870.1 | 43.642 | 346 | 75 | 13 | 53 | 377 | 6 | 252 | 3.35e-70 | 224 |
| Msa1417910 | AT1G01030.2 | 76.562 | 128 | 29 | 1 | 72 | 198 | 51 | 178 | 9.96e-64 | 209 |
| Msa1417910 | AT1G01030.1 | 80.165 | 121 | 23 | 1 | 72 | 191 | 51 | 171 | 6.21e-62 | 204 |
| Msa1417910 | AT3G61970.1 | 63.871 | 155 | 49 | 3 | 58 | 207 | 4 | 156 | 2.60e-59 | 196 |
| Msa1417910 | AT4G01500.1 | 41.304 | 322 | 94 | 12 | 73 | 378 | 32 | 274 | 4.06e-58 | 194 |
| Msa1417910 | AT3G11580.4 | 63.492 | 126 | 33 | 2 | 68 | 182 | 20 | 143 | 2.05e-50 | 171 |
| Msa1417910 | AT3G11580.2 | 63.492 | 126 | 33 | 2 | 68 | 182 | 20 | 143 | 2.05e-50 | 171 |
| Msa1417910 | AT3G11580.5 | 63.492 | 126 | 33 | 2 | 68 | 182 | 20 | 143 | 2.05e-50 | 171 |
| Msa1417910 | AT3G11580.1 | 63.492 | 126 | 33 | 2 | 68 | 182 | 20 | 143 | 6.77e-50 | 170 |
| Msa1417910 | AT3G11580.3 | 63.492 | 126 | 33 | 2 | 68 | 182 | 20 | 143 | 8.69e-49 | 171 |
| Msa1417910 | AT2G36080.4 | 69.231 | 117 | 31 | 2 | 69 | 182 | 30 | 144 | 1.04e-47 | 161 |
| Msa1417910 | AT2G36080.2 | 69.231 | 117 | 31 | 2 | 69 | 182 | 30 | 144 | 1.04e-47 | 161 |
| Msa1417910 | AT2G36080.1 | 69.231 | 117 | 31 | 2 | 69 | 182 | 30 | 144 | 1.37e-47 | 164 |
| Msa1417910 | AT2G36080.3 | 69.231 | 117 | 31 | 2 | 69 | 182 | 30 | 144 | 1.52e-47 | 163 |
| Msa1417910 | AT5G06250.5 | 65.546 | 119 | 29 | 2 | 73 | 181 | 42 | 158 | 3.13e-47 | 163 |
| Msa1417910 | AT5G06250.2 | 65.546 | 119 | 29 | 2 | 73 | 181 | 42 | 158 | 4.42e-47 | 163 |
| Msa1417910 | AT5G06250.4 | 65.546 | 119 | 29 | 2 | 73 | 181 | 42 | 158 | 4.47e-47 | 163 |
| Msa1417910 | AT5G06250.1 | 65.000 | 120 | 30 | 2 | 73 | 182 | 42 | 159 | 8.68e-47 | 162 |
| Msa1417910 | AT5G06250.3 | 65.000 | 120 | 30 | 2 | 73 | 182 | 42 | 159 | 9.88e-47 | 162 |
| Msa1417910 | AT1G68840.2 | 68.966 | 116 | 32 | 3 | 69 | 182 | 180 | 293 | 1.19e-46 | 164 |
| Msa1417910 | AT1G68840.1 | 68.966 | 116 | 32 | 3 | 69 | 182 | 180 | 293 | 1.19e-46 | 164 |
| Msa1417910 | AT1G13260.1 | 70.536 | 112 | 30 | 2 | 74 | 184 | 185 | 294 | 1.20e-46 | 164 |
| Msa1417910 | AT3G25730.1 | 59.524 | 126 | 42 | 3 | 64 | 182 | 166 | 289 | 5.78e-44 | 157 |
| Msa1417910 | AT1G25560.1 | 62.295 | 122 | 36 | 2 | 69 | 182 | 187 | 306 | 6.00e-44 | 157 |
| Msa1417910 | AT1G50680.1 | 50.000 | 100 | 39 | 2 | 75 | 163 | 155 | 254 | 7.76e-26 | 107 |
| Msa1417910 | AT1G51120.1 | 49.485 | 97 | 41 | 1 | 75 | 163 | 176 | 272 | 2.30e-24 | 103 |
| Msa1417910 | AT4G32010.1 | 41.053 | 95 | 51 | 3 | 76 | 168 | 285 | 376 | 2.30e-14 | 75.9 |
| Msa1417910 | AT4G32010.2 | 41.053 | 95 | 51 | 3 | 76 | 168 | 281 | 372 | 2.38e-14 | 75.9 |
| Msa1417910 | AT2G30470.1 | 39.560 | 91 | 50 | 3 | 76 | 164 | 294 | 381 | 7.74e-14 | 74.3 |
| Msa1417910 | AT2G33860.1 | 41.304 | 92 | 53 | 1 | 75 | 165 | 157 | 248 | 5.53e-12 | 68.2 |
| Msa1417910 | AT1G35240.1 | 37.864 | 103 | 58 | 2 | 77 | 173 | 126 | 228 | 1.43e-11 | 67.0 |
| Msa1417910 | AT2G33860.2 | 40.659 | 91 | 53 | 1 | 76 | 165 | 1 | 91 | 4.93e-11 | 64.7 |
| Msa1417910 | AT1G35520.1 | 36.893 | 103 | 59 | 2 | 77 | 173 | 126 | 228 | 7.09e-11 | 64.7 |
| Msa1417910 | AT5G60450.2 | 34.426 | 122 | 79 | 1 | 61 | 181 | 137 | 258 | 7.84e-11 | 64.7 |
| Msa1417910 | AT5G60450.1 | 34.426 | 122 | 79 | 1 | 61 | 181 | 161 | 282 | 8.45e-11 | 64.7 |
Find 134 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTTCGATCTTCAAAATTT+AGG | 0.195221 | tig0024531:-13263 | None:intergenic |
| TTCAGTGGTGCCGGCGATAT+TGG | 0.224155 | tig0024531:-14193 | None:intergenic |
| GGAAAACGACTGAGACTATT+TGG | 0.226531 | tig0024531:+14002 | Msa1417910:CDS |
| CCCTCTTCTACAACAACTTC+TGG | 0.253546 | tig0024531:+14107 | Msa1417910:CDS |
| GTAGAAGGGGCAGCGTAATT+AGG | 0.294314 | tig0024531:-13633 | None:intergenic |
| AACTTCGCTGCACTTTGATT+TGG | 0.298974 | tig0024531:+14157 | Msa1417910:CDS |
| TACTTCTCTGCGTGCTGCTT+TGG | 0.305864 | tig0024531:-13201 | None:intergenic |
| ATGGTAAGATGTGGCGGTTC+AGG | 0.308215 | tig0024531:+13283 | Msa1417910:CDS |
| GAATCAATTATCATATTCAT+AGG | 0.331308 | tig0024531:-13933 | None:intergenic |
| GGCGGTTCAGGTATTCATAT+TGG | 0.345717 | tig0024531:+13295 | Msa1417910:CDS |
| GTGGTTGATGGTGGCGTAAT+TGG | 0.354445 | tig0024531:-13828 | None:intergenic |
| TGAAGAGGAGGTAGATTTGA+TGG | 0.354882 | tig0024531:+12981 | Msa1417910:CDS |
| TCAGTGGTGCCGGCGATATT+GGG | 0.365725 | tig0024531:-14192 | None:intergenic |
| AAAGGCAGTGGAGGAGGAGG+AGG | 0.366186 | tig0024531:-13519 | None:intergenic |
| CGCAGAGAAGTACTTCCCTT+TGG | 0.372478 | tig0024531:+13212 | Msa1417910:CDS |
| GAAAACGACTGAGACTATTT+GGG | 0.373722 | tig0024531:+14003 | Msa1417910:CDS |
| TGAGGATGAGATATTGTAGA+AGG | 0.383802 | tig0024531:-13648 | None:intergenic |
| ACCAAAATGAATCCATGGTT+GGG | 0.385348 | tig0024531:+12793 | None:intergenic |
| AGAGCATATGTTTGATAAAG+TGG | 0.387272 | tig0024531:+13137 | Msa1417910:CDS |
| AAAGGATGAGGAGGAGGAGG+AGG | 0.387884 | tig0024531:+13083 | Msa1417910:CDS |
| CAGAGTTATGTGATGACAAA+AGG | 0.396646 | tig0024531:+13327 | Msa1417910:CDS |
| TAGAAAGGCAGTGGAGGAGG+AGG | 0.402946 | tig0024531:-13522 | None:intergenic |
| AGATAGAAAGGCAGTGGAGG+AGG | 0.405784 | tig0024531:-13525 | None:intergenic |
| CCACCAGCTGTGGTGGTTGA+TGG | 0.413549 | tig0024531:-13840 | None:intergenic |
| AAGGGCAATGACGAAGGATT+AGG | 0.420096 | tig0024531:+13036 | Msa1417910:CDS |
| GGGGCAGCGTAATTAGGATT+AGG | 0.420563 | tig0024531:-13627 | None:intergenic |
| AATCATCACTATTCATCATA+TGG | 0.429981 | tig0024531:+13555 | Msa1417910:CDS |
| GACGAAGGATTAGGAGGAAT+AGG | 0.436627 | tig0024531:+13045 | Msa1417910:CDS |
| TTGATGGAGTTAAGACTTGG+AGG | 0.438088 | tig0024531:+12997 | Msa1417910:CDS |
| GAGGGTGGAAGTTGACGATT+AGG | 0.443967 | tig0024531:-14089 | None:intergenic |
| CCTCTTCTACAACAACTTCT+GGG | 0.444861 | tig0024531:+14108 | Msa1417910:CDS |
| GACACAGATTGTACATAGAT+TGG | 0.447780 | tig0024531:+13430 | Msa1417910:CDS |
| TAGGAAGGTGAGAATATTGA+GGG | 0.450373 | tig0024531:-13608 | None:intergenic |
| GATATTGAGGGATGAGGTGG+TGG | 0.450649 | tig0024531:-13497 | None:intergenic |
| GGAAGATAGAAAGGCAGTGG+AGG | 0.452590 | tig0024531:-13528 | None:intergenic |
| GCGAGGAGGTGAGATAATAG+AGG | 0.457021 | tig0024531:-13806 | None:intergenic |
| GGAGGAAGATAGAAAGGCAG+TGG | 0.458358 | tig0024531:-13531 | None:intergenic |
| CCGCGGTGATGATGTGCAAC+TGG | 0.459480 | tig0024531:-13960 | None:intergenic |
| ATCATGATCAACATCACATA+GGG | 0.468716 | tig0024531:+14132 | Msa1417910:CDS |
| AGGTGATCAGCAGCAGGAGC+AGG | 0.469663 | tig0024531:-13747 | None:intergenic |
| GATTCTTCTACCAACGAGAA+AGG | 0.473959 | tig0024531:+13234 | Msa1417910:CDS |
| TTAGGAAGGTGAGAATATTG+AGG | 0.476881 | tig0024531:-13609 | None:intergenic |
| GAGTTAAGACTTGGAGGAGG+GGG | 0.479014 | tig0024531:+13003 | Msa1417910:CDS |
| TGGAGTTAAGACTTGGAGGA+GGG | 0.479526 | tig0024531:+13001 | Msa1417910:CDS |
| CGGCGATATTGGGAATTAGA+AGG | 0.483289 | tig0024531:-14182 | None:intergenic |
| CGAGGAGGTGAGATAATAGA+GGG | 0.488870 | tig0024531:-13805 | None:intergenic |
| CACCAAAATGAATCCATGGT+TGG | 0.489235 | tig0024531:+12792 | None:intergenic |
| GATTTGATGGAGTTAAGACT+TGG | 0.489573 | tig0024531:+12994 | Msa1417910:CDS |
| TATGATGAATAGTGATGATT+GGG | 0.494045 | tig0024531:-13552 | None:intergenic |
| GAGGAGGAGGAGGATATTGA+GGG | 0.497580 | tig0024531:-13509 | None:intergenic |
| CAGCAGCAGGAGCAGGGTGG+TGG | 0.502611 | tig0024531:-13740 | None:intergenic |
| TTCAAAGGATGAGGAGGAGG+AGG | 0.506022 | tig0024531:+13080 | Msa1417910:CDS |
| GAGGATGAGATATTGTAGAA+GGG | 0.507152 | tig0024531:-13647 | None:intergenic |
| CCACCATCAACCACCACAGC+TGG | 0.507318 | tig0024531:+13837 | Msa1417910:CDS |
| ATTCTTCTACCAACGAGAAA+GGG | 0.509922 | tig0024531:+13235 | Msa1417910:CDS |
| ATATGATGAATAGTGATGAT+TGG | 0.513248 | tig0024531:-13553 | None:intergenic |
| TTCTTCAAATTCAAAGGATG+AGG | 0.513842 | tig0024531:+13071 | Msa1417910:CDS |
| GTTTCTTCTCCTTAACGAAA+CGG | 0.517535 | tig0024531:-13356 | None:intergenic |
| TTCTTCTTCAGCACCACCAC+AGG | 0.518188 | tig0024531:+14058 | Msa1417910:CDS |
| AGGATGTTCTTCAAATTCAA+AGG | 0.518491 | tig0024531:+13065 | Msa1417910:CDS |
| AGGGTGGAGCCGTTTCGTTA+AGG | 0.519476 | tig0024531:+13347 | Msa1417910:CDS |
| TTTCAGGGATCCGTGGTGCA+AGG | 0.522724 | tig0024531:+13879 | Msa1417910:CDS |
| TGATTGGGAGGAAGATAGAA+AGG | 0.523415 | tig0024531:-13537 | None:intergenic |
| AGGATGAGATATTGTAGAAG+GGG | 0.527536 | tig0024531:-13646 | None:intergenic |
| AAATTGTTGTTGTAATATTG+AGG | 0.530975 | tig0024531:-13666 | None:intergenic |
| GAGACTATTTGGGGTTAACA+TGG | 0.535206 | tig0024531:+14013 | Msa1417910:CDS |
| GATATGATCTTCAGTGGTGC+CGG | 0.535398 | tig0024531:-14202 | None:intergenic |
| ATGGAGTTAAGACTTGGAGG+AGG | 0.540445 | tig0024531:+13000 | Msa1417910:CDS |
| GGAGTTAAGACTTGGAGGAG+GGG | 0.544084 | tig0024531:+13002 | Msa1417910:CDS |
| TTCAGGGATCCGTGGTGCAA+GGG | 0.545428 | tig0024531:+13880 | Msa1417910:CDS |
| CGTTGGTAGAAGAATCCAAA+GGG | 0.545569 | tig0024531:-13227 | None:intergenic |
| AGGGTTACAGACGTCACAGC+TGG | 0.549480 | tig0024531:+12918 | Msa1417910:intron |
| GAGGATATTGAGGGATGAGG+TGG | 0.549967 | tig0024531:-13500 | None:intergenic |
| TTCAAATTCAAAGGATGAGG+AGG | 0.550070 | tig0024531:+13074 | Msa1417910:CDS |
| TGTACATAGATTGGAGGCCA+AGG | 0.550302 | tig0024531:+13439 | Msa1417910:CDS |
| CCCAGAAGTTGTTGTAGAAG+AGG | 0.550466 | tig0024531:-14108 | None:intergenic |
| AAATTCAAAGGATGAGGAGG+AGG | 0.551226 | tig0024531:+13077 | Msa1417910:CDS |
| CCAAAATGAATCCATGGTTG+GGG | 0.554397 | tig0024531:+12794 | None:intergenic |
| TTCAGCTTCCCTACGTCACT+AGG | 0.557671 | tig0024531:-13165 | None:intergenic |
| CACTATTCATCATATGGTGG+TGG | 0.562154 | tig0024531:+13561 | Msa1417910:CDS |
| AGAGTTATGTGATGACAAAA+GGG | 0.563519 | tig0024531:+13328 | Msa1417910:CDS |
| GAGGAGGATATTGAGGGATG+AGG | 0.567145 | tig0024531:-13503 | None:intergenic |
| GGCAATGACGAAGGATTAGG+AGG | 0.574623 | tig0024531:+13039 | Msa1417910:CDS |
| TTAACAAGGTGATCAGCAGC+AGG | 0.575298 | tig0024531:-13753 | None:intergenic |
| TGTGCAATTCAGCACGTCCA+CGG | 0.575558 | tig0024531:-13407 | None:intergenic |
| CCAGAAGTTGTTGTAGAAGA+GGG | 0.577780 | tig0024531:-14107 | None:intergenic |
| AATCAATTATCATATTCATA+GGG | 0.579857 | tig0024531:-13932 | None:intergenic |
| GAGTACTGAGAGTGTGCCCT+TGG | 0.581237 | tig0024531:-13456 | None:intergenic |
| CTTCTAATTCCCAATATCGC+CGG | 0.581436 | tig0024531:+14183 | Msa1417910:CDS |
| TTAGGCATTGCCGCCTGTGG+TGG | 0.586107 | tig0024531:-14071 | None:intergenic |
| GATCATGATCAACATCACAT+AGG | 0.586128 | tig0024531:+14131 | Msa1417910:CDS |
| CACACCACCACCAGCTGTGG+TGG | 0.589837 | tig0024531:-13847 | None:intergenic |
| TGGGAAGTTGAATGAAGAGG+AGG | 0.590300 | tig0024531:+12969 | Msa1417910:CDS |
| CACCACAGCTGGTGGTGGTG+TGG | 0.591127 | tig0024531:+13848 | Msa1417910:CDS |
| GGTGATCAGCAGCAGGAGCA+GGG | 0.594253 | tig0024531:-13746 | None:intergenic |
| AAGGAGAAGAAACTTGATGC+TGG | 0.595535 | tig0024531:+13366 | Msa1417910:CDS |
| ATCCACACCACCACCAGCTG+TGG | 0.603339 | tig0024531:-13850 | None:intergenic |
| ACAGATTGTACATAGATTGG+AGG | 0.603584 | tig0024531:+13433 | Msa1417910:CDS |
| TAGTATTAACATTGCCTCCG+CGG | 0.604612 | tig0024531:-13977 | None:intergenic |
| CGATTAGGCATTGCCGCCTG+TGG | 0.607948 | tig0024531:-14074 | None:intergenic |
| AGGAAGGTGAGAATATTGAG+GGG | 0.607953 | tig0024531:-13607 | None:intergenic |
| CCATCAACCACCACAGCTGG+TGG | 0.608577 | tig0024531:+13840 | Msa1417910:CDS |
| AAGATCCCAAACCCCAACCA+TGG | 0.608616 | tig0024531:-12805 | None:intergenic |
| ATCGAAATGGTAAGATGTGG+CGG | 0.613418 | tig0024531:+13277 | Msa1417910:CDS |
| AAGGTGAGAATATTGAGGGG+AGG | 0.614133 | tig0024531:-13604 | None:intergenic |
| CCAGCTGTGGTGGTTGATGG+TGG | 0.616460 | tig0024531:-13837 | None:intergenic |
| CTCTTCTACAACAACTTCTG+GGG | 0.618726 | tig0024531:+14109 | Msa1417910:CDS |
| TGGTGACACCTAGTGACGTA+GGG | 0.621412 | tig0024531:+13157 | Msa1417910:CDS |
| AAGAGCAAGGGCAATGACGA+AGG | 0.626355 | tig0024531:+13030 | Msa1417910:CDS |
| CATCACTATTCATCATATGG+TGG | 0.627152 | tig0024531:+13558 | Msa1417910:CDS |
| GAAGTTGTTGTAGAAGAGGG+TGG | 0.628343 | tig0024531:-14104 | None:intergenic |
| CAGCGTAATTAGGATTAGGA+AGG | 0.629941 | tig0024531:-13623 | None:intergenic |
| TCAACCACCACAGCTGGTGG+TGG | 0.631467 | tig0024531:+13843 | Msa1417910:CDS |
| TTCTTCAGCACCACCACAGG+CGG | 0.633356 | tig0024531:+14061 | Msa1417910:CDS |
| AAAACGACTGAGACTATTTG+GGG | 0.634135 | tig0024531:+14004 | Msa1417910:CDS |
| GATGAATAGTGATGATTGGG+AGG | 0.640962 | tig0024531:-13549 | None:intergenic |
| GAGGAGGTGAGATAATAGAG+GGG | 0.642836 | tig0024531:-13804 | None:intergenic |
| GGTTGGGAAGTTGAATGAAG+AGG | 0.643292 | tig0024531:+12966 | Msa1417910:CDS |
| GTGGTGACACCTAGTGACGT+AGG | 0.643690 | tig0024531:+13156 | Msa1417910:CDS |
| TGATGGTGGCGTAATTGGCG+AGG | 0.643835 | tig0024531:-13823 | None:intergenic |
| AAGATCGAAATGGTAAGATG+TGG | 0.654473 | tig0024531:+13274 | Msa1417910:CDS |
| GTACATAGATTGGAGGCCAA+GGG | 0.664207 | tig0024531:+13440 | Msa1417910:CDS |
| GGAGGCAATGTTAATACTAG+CGG | 0.665755 | tig0024531:+13981 | Msa1417910:CDS |
| GTTATGTGATGACAAAAGGG+TGG | 0.673333 | tig0024531:+13331 | Msa1417910:CDS |
| TTGTTGATGCCCTTGCACCA+CGG | 0.680815 | tig0024531:-13889 | None:intergenic |
| TCGTTGGTAGAAGAATCCAA+AGG | 0.680986 | tig0024531:-13228 | None:intergenic |
| CATGATCAACATCACATAGG+GGG | 0.690937 | tig0024531:+14134 | Msa1417910:CDS |
| GTTGCACATCATCACCGCGG+AGG | 0.703943 | tig0024531:+13963 | Msa1417910:CDS |
| GATCAGCAGCAGGAGCAGGG+TGG | 0.705208 | tig0024531:-13743 | None:intergenic |
| TCATGATCAACATCACATAG+GGG | 0.705858 | tig0024531:+14133 | Msa1417910:CDS |
| TGGTGGCGTAATTGGCGAGG+AGG | 0.722964 | tig0024531:-13820 | None:intergenic |
| GCAATTCAGCACGTCCACGG+TGG | 0.740263 | tig0024531:-13404 | None:intergenic |
| CCAGTTGCACATCATCACCG+CGG | 0.781500 | tig0024531:+13960 | Msa1417910:CDS |
| GACATTGTATCATTCCACCG+TGG | 0.786574 | tig0024531:+13390 | Msa1417910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATCAATTCAATCTATATT+TGG | + | tig0024531:12839-12858 | Msa1417910:intron | 15.0% |
| !! | AATCAATTATCATATTCATA+GGG | - | tig0024531:13935-13954 | None:intergenic | 15.0% |
| !! | AAATCAATTCAATCTATATT+TGG | + | tig0024531:12839-12858 | Msa1417910:intron | 15.0% |
| !! | AATCAATTATCATATTCATA+GGG | - | tig0024531:13935-13954 | None:intergenic | 15.0% |
| !!! | AAATTGTTGTTGTAATATTG+AGG | - | tig0024531:13669-13688 | None:intergenic | 20.0% |
| !! | GAATCAATTATCATATTCAT+AGG | - | tig0024531:13936-13955 | None:intergenic | 20.0% |
| !!! | AAATTGTTGTTGTAATATTG+AGG | - | tig0024531:13669-13688 | None:intergenic | 20.0% |
| !! | GAATCAATTATCATATTCAT+AGG | - | tig0024531:13936-13955 | None:intergenic | 20.0% |
| ! | TCAATTCAATCTATATTTGG+TGG | + | tig0024531:12842-12861 | Msa1417910:intron | 25.0% |
| !! | ATGAATTAATTTGATCCACT+TGG | + | tig0024531:12888-12907 | Msa1417910:intron | 25.0% |
| ! | CATTTCGATCTTCAAAATTT+AGG | - | tig0024531:13266-13285 | None:intergenic | 25.0% |
| !!! | CTAAATTTTGAAGATCGAAA+TGG | + | tig0024531:13264-13283 | Msa1417910:CDS | 25.0% |
| ! | TATGATGAATAGTGATGATT+GGG | - | tig0024531:13555-13574 | None:intergenic | 25.0% |
| ! | ATATGATGAATAGTGATGAT+TGG | - | tig0024531:13556-13575 | None:intergenic | 25.0% |
| ! | AATCATCACTATTCATCATA+TGG | + | tig0024531:13555-13574 | Msa1417910:CDS | 25.0% |
| ! | TCAATTCAATCTATATTTGG+TGG | + | tig0024531:12842-12861 | Msa1417910:intron | 25.0% |
| !! | ATGAATTAATTTGATCCACT+TGG | + | tig0024531:12888-12907 | Msa1417910:intron | 25.0% |
| ! | CATTTCGATCTTCAAAATTT+AGG | - | tig0024531:13266-13285 | None:intergenic | 25.0% |
| !!! | CTAAATTTTGAAGATCGAAA+TGG | + | tig0024531:13264-13283 | Msa1417910:CDS | 25.0% |
| ! | TATGATGAATAGTGATGATT+GGG | - | tig0024531:13555-13574 | None:intergenic | 25.0% |
| ! | ATATGATGAATAGTGATGAT+TGG | - | tig0024531:13556-13575 | None:intergenic | 25.0% |
| ! | AATCATCACTATTCATCATA+TGG | + | tig0024531:13555-13574 | Msa1417910:CDS | 25.0% |
| TTGATCCACTTGGTATAATT+AGG | + | tig0024531:12898-12917 | Msa1417910:intron | 30.0% | |
| TGATCCACTTGGTATAATTA+GGG | + | tig0024531:12899-12918 | Msa1417910:intron | 30.0% | |
| AGGATGTTCTTCAAATTCAA+AGG | + | tig0024531:13065-13084 | Msa1417910:CDS | 30.0% | |
| TTCTTCAAATTCAAAGGATG+AGG | + | tig0024531:13071-13090 | Msa1417910:CDS | 30.0% | |
| AGAGCATATGTTTGATAAAG+TGG | + | tig0024531:13137-13156 | Msa1417910:CDS | 30.0% | |
| AGAGTTATGTGATGACAAAA+GGG | + | tig0024531:13328-13347 | Msa1417910:CDS | 30.0% | |
| ATCATGATCAACATCACATA+GGG | + | tig0024531:14132-14151 | Msa1417910:CDS | 30.0% | |
| TTGATCCACTTGGTATAATT+AGG | + | tig0024531:12898-12917 | Msa1417910:intron | 30.0% | |
| TGATCCACTTGGTATAATTA+GGG | + | tig0024531:12899-12918 | Msa1417910:intron | 30.0% | |
| AGGATGTTCTTCAAATTCAA+AGG | + | tig0024531:13065-13084 | Msa1417910:CDS | 30.0% | |
| TTCTTCAAATTCAAAGGATG+AGG | + | tig0024531:13071-13090 | Msa1417910:CDS | 30.0% | |
| AGAGCATATGTTTGATAAAG+TGG | + | tig0024531:13137-13156 | Msa1417910:CDS | 30.0% | |
| AGAGTTATGTGATGACAAAA+GGG | + | tig0024531:13328-13347 | Msa1417910:CDS | 30.0% | |
| ATCATGATCAACATCACATA+GGG | + | tig0024531:14132-14151 | Msa1417910:CDS | 30.0% | |
| GTAACCCTAATTATACCAAG+TGG | - | tig0024531:12906-12925 | None:intergenic | 35.0% | |
| AGAAGAAGAAGAAGAAGATG+TGG | + | tig0024531:12942-12961 | Msa1417910:CDS | 35.0% | |
| GAAGAAGAAGAAGAAGATGT+GGG | + | tig0024531:12943-12962 | Msa1417910:CDS | 35.0% | |
| AAGAAGAAGAAGAAGATGTG+GGG | + | tig0024531:12944-12963 | Msa1417910:CDS | 35.0% | |
| GATTTGATGGAGTTAAGACT+TGG | + | tig0024531:12994-13013 | Msa1417910:CDS | 35.0% | |
| TTCAAATTCAAAGGATGAGG+AGG | + | tig0024531:13074-13093 | Msa1417910:CDS | 35.0% | |
| ATTCTTCTACCAACGAGAAA+GGG | + | tig0024531:13235-13254 | Msa1417910:CDS | 35.0% | |
| AAGATCGAAATGGTAAGATG+TGG | + | tig0024531:13274-13293 | Msa1417910:CDS | 35.0% | |
| ! | CTTTTGTCATCACATAACTC+TGG | - | tig0024531:13329-13348 | None:intergenic | 35.0% |
| CAGAGTTATGTGATGACAAA+AGG | + | tig0024531:13327-13346 | Msa1417910:CDS | 35.0% | |
| GTTTCTTCTCCTTAACGAAA+CGG | - | tig0024531:13359-13378 | None:intergenic | 35.0% | |
| GACACAGATTGTACATAGAT+TGG | + | tig0024531:13430-13449 | Msa1417910:CDS | 35.0% | |
| ACAGATTGTACATAGATTGG+AGG | + | tig0024531:13433-13452 | Msa1417910:CDS | 35.0% | |
| CATCACTATTCATCATATGG+TGG | + | tig0024531:13558-13577 | Msa1417910:CDS | 35.0% | |
| TAGGAAGGTGAGAATATTGA+GGG | - | tig0024531:13611-13630 | None:intergenic | 35.0% | |
| TTAGGAAGGTGAGAATATTG+AGG | - | tig0024531:13612-13631 | None:intergenic | 35.0% | |
| AGGATGAGATATTGTAGAAG+GGG | - | tig0024531:13649-13668 | None:intergenic | 35.0% | |
| GAGGATGAGATATTGTAGAA+GGG | - | tig0024531:13650-13669 | None:intergenic | 35.0% | |
| TGAGGATGAGATATTGTAGA+AGG | - | tig0024531:13651-13670 | None:intergenic | 35.0% | |
| GAAAACGACTGAGACTATTT+GGG | + | tig0024531:14003-14022 | Msa1417910:CDS | 35.0% | |
| AAAACGACTGAGACTATTTG+GGG | + | tig0024531:14004-14023 | Msa1417910:CDS | 35.0% | |
| GATCATGATCAACATCACAT+AGG | + | tig0024531:14131-14150 | Msa1417910:CDS | 35.0% | |
| TCATGATCAACATCACATAG+GGG | + | tig0024531:14133-14152 | Msa1417910:CDS | 35.0% | |
| GTAACCCTAATTATACCAAG+TGG | - | tig0024531:12906-12925 | None:intergenic | 35.0% | |
| AGAAGAAGAAGAAGAAGATG+TGG | + | tig0024531:12942-12961 | Msa1417910:CDS | 35.0% | |
| GAAGAAGAAGAAGAAGATGT+GGG | + | tig0024531:12943-12962 | Msa1417910:CDS | 35.0% | |
| AAGAAGAAGAAGAAGATGTG+GGG | + | tig0024531:12944-12963 | Msa1417910:CDS | 35.0% | |
| GATTTGATGGAGTTAAGACT+TGG | + | tig0024531:12994-13013 | Msa1417910:CDS | 35.0% | |
| TTCAAATTCAAAGGATGAGG+AGG | + | tig0024531:13074-13093 | Msa1417910:CDS | 35.0% | |
| ATTCTTCTACCAACGAGAAA+GGG | + | tig0024531:13235-13254 | Msa1417910:CDS | 35.0% | |
| AAGATCGAAATGGTAAGATG+TGG | + | tig0024531:13274-13293 | Msa1417910:CDS | 35.0% | |
| ! | CTTTTGTCATCACATAACTC+TGG | - | tig0024531:13329-13348 | None:intergenic | 35.0% |
| CAGAGTTATGTGATGACAAA+AGG | + | tig0024531:13327-13346 | Msa1417910:CDS | 35.0% | |
| GTTTCTTCTCCTTAACGAAA+CGG | - | tig0024531:13359-13378 | None:intergenic | 35.0% | |
| GACACAGATTGTACATAGAT+TGG | + | tig0024531:13430-13449 | Msa1417910:CDS | 35.0% | |
| ACAGATTGTACATAGATTGG+AGG | + | tig0024531:13433-13452 | Msa1417910:CDS | 35.0% | |
| CATCACTATTCATCATATGG+TGG | + | tig0024531:13558-13577 | Msa1417910:CDS | 35.0% | |
| TAGGAAGGTGAGAATATTGA+GGG | - | tig0024531:13611-13630 | None:intergenic | 35.0% | |
| TTAGGAAGGTGAGAATATTG+AGG | - | tig0024531:13612-13631 | None:intergenic | 35.0% | |
| AGGATGAGATATTGTAGAAG+GGG | - | tig0024531:13649-13668 | None:intergenic | 35.0% | |
| GAGGATGAGATATTGTAGAA+GGG | - | tig0024531:13650-13669 | None:intergenic | 35.0% | |
| TGAGGATGAGATATTGTAGA+AGG | - | tig0024531:13651-13670 | None:intergenic | 35.0% | |
| GAAAACGACTGAGACTATTT+GGG | + | tig0024531:14003-14022 | Msa1417910:CDS | 35.0% | |
| AAAACGACTGAGACTATTTG+GGG | + | tig0024531:14004-14023 | Msa1417910:CDS | 35.0% | |
| GATCATGATCAACATCACAT+AGG | + | tig0024531:14131-14150 | Msa1417910:CDS | 35.0% | |
| TCATGATCAACATCACATAG+GGG | + | tig0024531:14133-14152 | Msa1417910:CDS | 35.0% | |
| AGAAGAAGAAGAAGATGTGG+GGG | + | tig0024531:12945-12964 | Msa1417910:CDS | 40.0% | |
| TGAAGAGGAGGTAGATTTGA+TGG | + | tig0024531:12981-13000 | Msa1417910:CDS | 40.0% | |
| TTGATGGAGTTAAGACTTGG+AGG | + | tig0024531:12997-13016 | Msa1417910:CDS | 40.0% | |
| AAATTCAAAGGATGAGGAGG+AGG | + | tig0024531:13077-13096 | Msa1417910:CDS | 40.0% | |
| ! | CGTTGGTAGAAGAATCCAAA+GGG | - | tig0024531:13230-13249 | None:intergenic | 40.0% |
| ! | TCGTTGGTAGAAGAATCCAA+AGG | - | tig0024531:13231-13250 | None:intergenic | 40.0% |
| GATTCTTCTACCAACGAGAA+AGG | + | tig0024531:13234-13253 | Msa1417910:CDS | 40.0% | |
| ATCGAAATGGTAAGATGTGG+CGG | + | tig0024531:13277-13296 | Msa1417910:CDS | 40.0% | |
| GTTATGTGATGACAAAAGGG+TGG | + | tig0024531:13331-13350 | Msa1417910:CDS | 40.0% | |
| AAGGAGAAGAAACTTGATGC+TGG | + | tig0024531:13366-13385 | Msa1417910:CDS | 40.0% | |
| TGATTGGGAGGAAGATAGAA+AGG | - | tig0024531:13540-13559 | None:intergenic | 40.0% | |
| GATGAATAGTGATGATTGGG+AGG | - | tig0024531:13552-13571 | None:intergenic | 40.0% | |
| CACTATTCATCATATGGTGG+TGG | + | tig0024531:13561-13580 | Msa1417910:CDS | 40.0% | |
| AGGAAGGTGAGAATATTGAG+GGG | - | tig0024531:13610-13629 | None:intergenic | 40.0% | |
| CAGCGTAATTAGGATTAGGA+AGG | - | tig0024531:13626-13645 | None:intergenic | 40.0% | |
| ! | TGGTGTGGATCAACATTTTC+AGG | + | tig0024531:13863-13882 | Msa1417910:CDS | 40.0% |
| ! | GGTGTGGATCAACATTTTCA+GGG | + | tig0024531:13864-13883 | Msa1417910:CDS | 40.0% |
| TAGTATTAACATTGCCTCCG+CGG | - | tig0024531:13980-13999 | None:intergenic | 40.0% | |
| GGAGGCAATGTTAATACTAG+CGG | + | tig0024531:13981-14000 | Msa1417910:CDS | 40.0% | |
| GGAAAACGACTGAGACTATT+TGG | + | tig0024531:14002-14021 | Msa1417910:CDS | 40.0% | |
| ! | GAGACTATTTGGGGTTAACA+TGG | + | tig0024531:14013-14032 | Msa1417910:CDS | 40.0% |
| CCAGAAGTTGTTGTAGAAGA+GGG | - | tig0024531:14110-14129 | None:intergenic | 40.0% | |
| CCTCTTCTACAACAACTTCT+GGG | + | tig0024531:14108-14127 | Msa1417910:CDS | 40.0% | |
| CTCTTCTACAACAACTTCTG+GGG | + | tig0024531:14109-14128 | Msa1417910:CDS | 40.0% | |
| CATGATCAACATCACATAGG+GGG | + | tig0024531:14134-14153 | Msa1417910:CDS | 40.0% | |
| AACTTCGCTGCACTTTGATT+TGG | + | tig0024531:14157-14176 | Msa1417910:CDS | 40.0% | |
| CTTCTAATTCCCAATATCGC+CGG | + | tig0024531:14183-14202 | Msa1417910:CDS | 40.0% | |
| AGAAGAAGAAGAAGATGTGG+GGG | + | tig0024531:12945-12964 | Msa1417910:CDS | 40.0% | |
| TGAAGAGGAGGTAGATTTGA+TGG | + | tig0024531:12981-13000 | Msa1417910:CDS | 40.0% | |
| TTGATGGAGTTAAGACTTGG+AGG | + | tig0024531:12997-13016 | Msa1417910:CDS | 40.0% | |
| AAATTCAAAGGATGAGGAGG+AGG | + | tig0024531:13077-13096 | Msa1417910:CDS | 40.0% | |
| ! | CGTTGGTAGAAGAATCCAAA+GGG | - | tig0024531:13230-13249 | None:intergenic | 40.0% |
| ! | TCGTTGGTAGAAGAATCCAA+AGG | - | tig0024531:13231-13250 | None:intergenic | 40.0% |
| GATTCTTCTACCAACGAGAA+AGG | + | tig0024531:13234-13253 | Msa1417910:CDS | 40.0% | |
| ATCGAAATGGTAAGATGTGG+CGG | + | tig0024531:13277-13296 | Msa1417910:CDS | 40.0% | |
| GTTATGTGATGACAAAAGGG+TGG | + | tig0024531:13331-13350 | Msa1417910:CDS | 40.0% | |
| AAGGAGAAGAAACTTGATGC+TGG | + | tig0024531:13366-13385 | Msa1417910:CDS | 40.0% | |
| TGATTGGGAGGAAGATAGAA+AGG | - | tig0024531:13540-13559 | None:intergenic | 40.0% | |
| GATGAATAGTGATGATTGGG+AGG | - | tig0024531:13552-13571 | None:intergenic | 40.0% | |
| CACTATTCATCATATGGTGG+TGG | + | tig0024531:13561-13580 | Msa1417910:CDS | 40.0% | |
| AGGAAGGTGAGAATATTGAG+GGG | - | tig0024531:13610-13629 | None:intergenic | 40.0% | |
| CAGCGTAATTAGGATTAGGA+AGG | - | tig0024531:13626-13645 | None:intergenic | 40.0% | |
| ! | TGGTGTGGATCAACATTTTC+AGG | + | tig0024531:13863-13882 | Msa1417910:CDS | 40.0% |
| ! | GGTGTGGATCAACATTTTCA+GGG | + | tig0024531:13864-13883 | Msa1417910:CDS | 40.0% |
| TAGTATTAACATTGCCTCCG+CGG | - | tig0024531:13980-13999 | None:intergenic | 40.0% | |
| GGAGGCAATGTTAATACTAG+CGG | + | tig0024531:13981-14000 | Msa1417910:CDS | 40.0% | |
| GGAAAACGACTGAGACTATT+TGG | + | tig0024531:14002-14021 | Msa1417910:CDS | 40.0% | |
| ! | GAGACTATTTGGGGTTAACA+TGG | + | tig0024531:14013-14032 | Msa1417910:CDS | 40.0% |
| CCAGAAGTTGTTGTAGAAGA+GGG | - | tig0024531:14110-14129 | None:intergenic | 40.0% | |
| CCTCTTCTACAACAACTTCT+GGG | + | tig0024531:14108-14127 | Msa1417910:CDS | 40.0% | |
| CTCTTCTACAACAACTTCTG+GGG | + | tig0024531:14109-14128 | Msa1417910:CDS | 40.0% | |
| CATGATCAACATCACATAGG+GGG | + | tig0024531:14134-14153 | Msa1417910:CDS | 40.0% | |
| AACTTCGCTGCACTTTGATT+TGG | + | tig0024531:14157-14176 | Msa1417910:CDS | 40.0% | |
| CTTCTAATTCCCAATATCGC+CGG | + | tig0024531:14183-14202 | Msa1417910:CDS | 40.0% | |
| AAGAAGAAGATGTGGGGGTT+GGG | + | tig0024531:12950-12969 | Msa1417910:CDS | 45.0% | |
| GGTTGGGAAGTTGAATGAAG+AGG | + | tig0024531:12966-12985 | Msa1417910:CDS | 45.0% | |
| TGGGAAGTTGAATGAAGAGG+AGG | + | tig0024531:12969-12988 | Msa1417910:CDS | 45.0% | |
| ATGGAGTTAAGACTTGGAGG+AGG | + | tig0024531:13000-13019 | Msa1417910:CDS | 45.0% | |
| TGGAGTTAAGACTTGGAGGA+GGG | + | tig0024531:13001-13020 | Msa1417910:CDS | 45.0% | |
| AAGGGCAATGACGAAGGATT+AGG | + | tig0024531:13036-13055 | Msa1417910:CDS | 45.0% | |
| GACGAAGGATTAGGAGGAAT+AGG | + | tig0024531:13045-13064 | Msa1417910:CDS | 45.0% | |
| GGCGGTTCAGGTATTCATAT+TGG | + | tig0024531:13295-13314 | Msa1417910:CDS | 45.0% | |
| GACATTGTATCATTCCACCG+TGG | + | tig0024531:13390-13409 | Msa1417910:CDS | 45.0% | |
| TGTACATAGATTGGAGGCCA+AGG | + | tig0024531:13439-13458 | Msa1417910:CDS | 45.0% | |
| GTACATAGATTGGAGGCCAA+GGG | + | tig0024531:13440-13459 | Msa1417910:CDS | 45.0% | |
| AAGGTGAGAATATTGAGGGG+AGG | - | tig0024531:13607-13626 | None:intergenic | 45.0% | |
| TTAACAAGGTGATCAGCAGC+AGG | - | tig0024531:13756-13775 | None:intergenic | 45.0% | |
| GAGGAGGTGAGATAATAGAG+GGG | - | tig0024531:13807-13826 | None:intergenic | 45.0% | |
| CGAGGAGGTGAGATAATAGA+GGG | - | tig0024531:13808-13827 | None:intergenic | 45.0% | |
| !! | TCAACATTTTCAGGGATCCG+TGG | + | tig0024531:13872-13891 | Msa1417910:CDS | 45.0% |
| GAAGTTGTTGTAGAAGAGGG+TGG | - | tig0024531:14107-14126 | None:intergenic | 45.0% | |
| CCCTCTTCTACAACAACTTC+TGG | + | tig0024531:14107-14126 | Msa1417910:CDS | 45.0% | |
| CCCAGAAGTTGTTGTAGAAG+AGG | - | tig0024531:14111-14130 | None:intergenic | 45.0% | |
| CGGCGATATTGGGAATTAGA+AGG | - | tig0024531:14185-14204 | None:intergenic | 45.0% | |
| AAGAAGAAGATGTGGGGGTT+GGG | + | tig0024531:12950-12969 | Msa1417910:CDS | 45.0% | |
| GGTTGGGAAGTTGAATGAAG+AGG | + | tig0024531:12966-12985 | Msa1417910:CDS | 45.0% | |
| TGGGAAGTTGAATGAAGAGG+AGG | + | tig0024531:12969-12988 | Msa1417910:CDS | 45.0% | |
| ATGGAGTTAAGACTTGGAGG+AGG | + | tig0024531:13000-13019 | Msa1417910:CDS | 45.0% | |
| TGGAGTTAAGACTTGGAGGA+GGG | + | tig0024531:13001-13020 | Msa1417910:CDS | 45.0% | |
| AAGGGCAATGACGAAGGATT+AGG | + | tig0024531:13036-13055 | Msa1417910:CDS | 45.0% | |
| GACGAAGGATTAGGAGGAAT+AGG | + | tig0024531:13045-13064 | Msa1417910:CDS | 45.0% | |
| GGCGGTTCAGGTATTCATAT+TGG | + | tig0024531:13295-13314 | Msa1417910:CDS | 45.0% | |
| GACATTGTATCATTCCACCG+TGG | + | tig0024531:13390-13409 | Msa1417910:CDS | 45.0% | |
| TGTACATAGATTGGAGGCCA+AGG | + | tig0024531:13439-13458 | Msa1417910:CDS | 45.0% | |
| GTACATAGATTGGAGGCCAA+GGG | + | tig0024531:13440-13459 | Msa1417910:CDS | 45.0% | |
| AAGGTGAGAATATTGAGGGG+AGG | - | tig0024531:13607-13626 | None:intergenic | 45.0% | |
| TTAACAAGGTGATCAGCAGC+AGG | - | tig0024531:13756-13775 | None:intergenic | 45.0% | |
| GAGGAGGTGAGATAATAGAG+GGG | - | tig0024531:13807-13826 | None:intergenic | 45.0% | |
| CGAGGAGGTGAGATAATAGA+GGG | - | tig0024531:13808-13827 | None:intergenic | 45.0% | |
| !! | TCAACATTTTCAGGGATCCG+TGG | + | tig0024531:13872-13891 | Msa1417910:CDS | 45.0% |
| GAAGTTGTTGTAGAAGAGGG+TGG | - | tig0024531:14107-14126 | None:intergenic | 45.0% | |
| CCCTCTTCTACAACAACTTC+TGG | + | tig0024531:14107-14126 | Msa1417910:CDS | 45.0% | |
| CCCAGAAGTTGTTGTAGAAG+AGG | - | tig0024531:14111-14130 | None:intergenic | 45.0% | |
| CGGCGATATTGGGAATTAGA+AGG | - | tig0024531:14185-14204 | None:intergenic | 45.0% | |
| !! | TATTATTATTATTATTAACA+AGG | - | tig0024531:13770-13789 | None:intergenic | 5.0% |
| !! | TATTATTATTATTATTAACA+AGG | - | tig0024531:13770-13789 | None:intergenic | 5.0% |
| GAAGAAGAAGATGTGGGGGT+TGG | + | tig0024531:12949-12968 | Msa1417910:CDS | 50.0% | |
| GGAGTTAAGACTTGGAGGAG+GGG | + | tig0024531:13002-13021 | Msa1417910:CDS | 50.0% | |
| GAGTTAAGACTTGGAGGAGG+GGG | + | tig0024531:13003-13022 | Msa1417910:CDS | 50.0% | |
| AAGAGCAAGGGCAATGACGA+AGG | + | tig0024531:13030-13049 | Msa1417910:CDS | 50.0% | |
| GGCAATGACGAAGGATTAGG+AGG | + | tig0024531:13039-13058 | Msa1417910:CDS | 50.0% | |
| TTCAAAGGATGAGGAGGAGG+AGG | + | tig0024531:13080-13099 | Msa1417910:CDS | 50.0% | |
| TGGTGACACCTAGTGACGTA+GGG | + | tig0024531:13157-13176 | Msa1417910:CDS | 50.0% | |
| TTCAGCTTCCCTACGTCACT+AGG | - | tig0024531:13168-13187 | None:intergenic | 50.0% | |
| !! | TACTTCTCTGCGTGCTGCTT+TGG | - | tig0024531:13204-13223 | None:intergenic | 50.0% |
| !! | CGCAGAGAAGTACTTCCCTT+TGG | + | tig0024531:13212-13231 | Msa1417910:CDS | 50.0% |
| TAGGAGAAGCCCTTTCTCGT+TGG | - | tig0024531:13247-13266 | None:intergenic | 50.0% | |
| ATGGTAAGATGTGGCGGTTC+AGG | + | tig0024531:13283-13302 | Msa1417910:CDS | 50.0% | |
| TGTGCAATTCAGCACGTCCA+CGG | - | tig0024531:13410-13429 | None:intergenic | 50.0% | |
| GATATTGAGGGATGAGGTGG+TGG | - | tig0024531:13500-13519 | None:intergenic | 50.0% | |
| GAGGATATTGAGGGATGAGG+TGG | - | tig0024531:13503-13522 | None:intergenic | 50.0% | |
| GAGGAGGATATTGAGGGATG+AGG | - | tig0024531:13506-13525 | None:intergenic | 50.0% | |
| GAGGAGGAGGAGGATATTGA+GGG | - | tig0024531:13512-13531 | None:intergenic | 50.0% | |
| AGATAGAAAGGCAGTGGAGG+AGG | - | tig0024531:13528-13547 | None:intergenic | 50.0% | |
| GGAAGATAGAAAGGCAGTGG+AGG | - | tig0024531:13531-13550 | None:intergenic | 50.0% | |
| GGAGGAAGATAGAAAGGCAG+TGG | - | tig0024531:13534-13553 | None:intergenic | 50.0% | |
| GGGGCAGCGTAATTAGGATT+AGG | - | tig0024531:13630-13649 | None:intergenic | 50.0% | |
| GTAGAAGGGGCAGCGTAATT+AGG | - | tig0024531:13636-13655 | None:intergenic | 50.0% | |
| GCGAGGAGGTGAGATAATAG+AGG | - | tig0024531:13809-13828 | None:intergenic | 50.0% | |
| !! | GTGGTTGATGGTGGCGTAAT+TGG | - | tig0024531:13831-13850 | None:intergenic | 50.0% |
| TTGTTGATGCCCTTGCACCA+CGG | - | tig0024531:13892-13911 | None:intergenic | 50.0% | |
| TTCTTCTTCAGCACCACCAC+AGG | + | tig0024531:14058-14077 | Msa1417910:CDS | 50.0% | |
| GAGGGTGGAAGTTGACGATT+AGG | - | tig0024531:14092-14111 | None:intergenic | 50.0% | |
| GAAGAAGAAGATGTGGGGGT+TGG | + | tig0024531:12949-12968 | Msa1417910:CDS | 50.0% | |
| GGAGTTAAGACTTGGAGGAG+GGG | + | tig0024531:13002-13021 | Msa1417910:CDS | 50.0% | |
| GAGTTAAGACTTGGAGGAGG+GGG | + | tig0024531:13003-13022 | Msa1417910:CDS | 50.0% | |
| AAGAGCAAGGGCAATGACGA+AGG | + | tig0024531:13030-13049 | Msa1417910:CDS | 50.0% | |
| GGCAATGACGAAGGATTAGG+AGG | + | tig0024531:13039-13058 | Msa1417910:CDS | 50.0% | |
| TTCAAAGGATGAGGAGGAGG+AGG | + | tig0024531:13080-13099 | Msa1417910:CDS | 50.0% | |
| TGGTGACACCTAGTGACGTA+GGG | + | tig0024531:13157-13176 | Msa1417910:CDS | 50.0% | |
| TTCAGCTTCCCTACGTCACT+AGG | - | tig0024531:13168-13187 | None:intergenic | 50.0% | |
| !! | TACTTCTCTGCGTGCTGCTT+TGG | - | tig0024531:13204-13223 | None:intergenic | 50.0% |
| !! | CGCAGAGAAGTACTTCCCTT+TGG | + | tig0024531:13212-13231 | Msa1417910:CDS | 50.0% |
| TAGGAGAAGCCCTTTCTCGT+TGG | - | tig0024531:13247-13266 | None:intergenic | 50.0% | |
| ATGGTAAGATGTGGCGGTTC+AGG | + | tig0024531:13283-13302 | Msa1417910:CDS | 50.0% | |
| TGTGCAATTCAGCACGTCCA+CGG | - | tig0024531:13410-13429 | None:intergenic | 50.0% | |
| GATATTGAGGGATGAGGTGG+TGG | - | tig0024531:13500-13519 | None:intergenic | 50.0% | |
| GAGGATATTGAGGGATGAGG+TGG | - | tig0024531:13503-13522 | None:intergenic | 50.0% | |
| GAGGAGGATATTGAGGGATG+AGG | - | tig0024531:13506-13525 | None:intergenic | 50.0% | |
| GAGGAGGAGGAGGATATTGA+GGG | - | tig0024531:13512-13531 | None:intergenic | 50.0% | |
| AGATAGAAAGGCAGTGGAGG+AGG | - | tig0024531:13528-13547 | None:intergenic | 50.0% | |
| GGAAGATAGAAAGGCAGTGG+AGG | - | tig0024531:13531-13550 | None:intergenic | 50.0% | |
| GGAGGAAGATAGAAAGGCAG+TGG | - | tig0024531:13534-13553 | None:intergenic | 50.0% | |
| GGGGCAGCGTAATTAGGATT+AGG | - | tig0024531:13630-13649 | None:intergenic | 50.0% | |
| GTAGAAGGGGCAGCGTAATT+AGG | - | tig0024531:13636-13655 | None:intergenic | 50.0% | |
| GCGAGGAGGTGAGATAATAG+AGG | - | tig0024531:13809-13828 | None:intergenic | 50.0% | |
| !! | GTGGTTGATGGTGGCGTAAT+TGG | - | tig0024531:13831-13850 | None:intergenic | 50.0% |
| TTGTTGATGCCCTTGCACCA+CGG | - | tig0024531:13892-13911 | None:intergenic | 50.0% | |
| TTCTTCTTCAGCACCACCAC+AGG | + | tig0024531:14058-14077 | Msa1417910:CDS | 50.0% | |
| GAGGGTGGAAGTTGACGATT+AGG | - | tig0024531:14092-14111 | None:intergenic | 50.0% | |
| AGGGTTACAGACGTCACAGC+TGG | + | tig0024531:12918-12937 | Msa1417910:intron | 55.0% | |
| AAAGGATGAGGAGGAGGAGG+AGG | + | tig0024531:13083-13102 | Msa1417910:CDS | 55.0% | |
| GTGGTGACACCTAGTGACGT+AGG | + | tig0024531:13156-13175 | Msa1417910:CDS | 55.0% | |
| AGGGTGGAGCCGTTTCGTTA+AGG | + | tig0024531:13347-13366 | Msa1417910:CDS | 55.0% | |
| !! | GAGTACTGAGAGTGTGCCCT+TGG | - | tig0024531:13459-13478 | None:intergenic | 55.0% |
| GGAGGAGGAGGAGGATATTG+AGG | - | tig0024531:13513-13532 | None:intergenic | 55.0% | |
| TAGAAAGGCAGTGGAGGAGG+AGG | - | tig0024531:13525-13544 | None:intergenic | 55.0% | |
| !! | TGATGGTGGCGTAATTGGCG+AGG | - | tig0024531:13826-13845 | None:intergenic | 55.0% |
| TTTCAGGGATCCGTGGTGCA+AGG | + | tig0024531:13879-13898 | Msa1417910:CDS | 55.0% | |
| TTCAGGGATCCGTGGTGCAA+GGG | + | tig0024531:13880-13899 | Msa1417910:CDS | 55.0% | |
| CCAGTTGCACATCATCACCG+CGG | + | tig0024531:13960-13979 | Msa1417910:CDS | 55.0% | |
| TTCTTCAGCACCACCACAGG+CGG | + | tig0024531:14061-14080 | Msa1417910:CDS | 55.0% | |
| !! | TCAGTGGTGCCGGCGATATT+GGG | - | tig0024531:14195-14214 | None:intergenic | 55.0% |
| AGGGTTACAGACGTCACAGC+TGG | + | tig0024531:12918-12937 | Msa1417910:intron | 55.0% | |
| AAAGGATGAGGAGGAGGAGG+AGG | + | tig0024531:13083-13102 | Msa1417910:CDS | 55.0% | |
| GTGGTGACACCTAGTGACGT+AGG | + | tig0024531:13156-13175 | Msa1417910:CDS | 55.0% | |
| AGGGTGGAGCCGTTTCGTTA+AGG | + | tig0024531:13347-13366 | Msa1417910:CDS | 55.0% | |
| !! | GAGTACTGAGAGTGTGCCCT+TGG | - | tig0024531:13459-13478 | None:intergenic | 55.0% |
| GGAGGAGGAGGAGGATATTG+AGG | - | tig0024531:13513-13532 | None:intergenic | 55.0% | |
| TAGAAAGGCAGTGGAGGAGG+AGG | - | tig0024531:13525-13544 | None:intergenic | 55.0% | |
| !! | TGATGGTGGCGTAATTGGCG+AGG | - | tig0024531:13826-13845 | None:intergenic | 55.0% |
| TTTCAGGGATCCGTGGTGCA+AGG | + | tig0024531:13879-13898 | Msa1417910:CDS | 55.0% | |
| TTCAGGGATCCGTGGTGCAA+GGG | + | tig0024531:13880-13899 | Msa1417910:CDS | 55.0% | |
| CCAGTTGCACATCATCACCG+CGG | + | tig0024531:13960-13979 | Msa1417910:CDS | 55.0% | |
| TTCTTCAGCACCACCACAGG+CGG | + | tig0024531:14061-14080 | Msa1417910:CDS | 55.0% | |
| !! | TCAGTGGTGCCGGCGATATT+GGG | - | tig0024531:14195-14214 | None:intergenic | 55.0% |
| AGGAGGGGGAAGCAAGAGCA+AGG | + | tig0024531:13017-13036 | Msa1417910:CDS | 60.0% | |
| GGAGGGGGAAGCAAGAGCAA+GGG | + | tig0024531:13018-13037 | Msa1417910:CDS | 60.0% | |
| GCAATTCAGCACGTCCACGG+TGG | - | tig0024531:13407-13426 | None:intergenic | 60.0% | |
| AAAGGCAGTGGAGGAGGAGG+AGG | - | tig0024531:13522-13541 | None:intergenic | 60.0% | |
| GGTGATCAGCAGCAGGAGCA+GGG | - | tig0024531:13749-13768 | None:intergenic | 60.0% | |
| AGGTGATCAGCAGCAGGAGC+AGG | - | tig0024531:13750-13769 | None:intergenic | 60.0% | |
| ! | TGGTGGCGTAATTGGCGAGG+AGG | - | tig0024531:13823-13842 | None:intergenic | 60.0% |
| !! | CCAGCTGTGGTGGTTGATGG+TGG | - | tig0024531:13840-13859 | None:intergenic | 60.0% |
| CCACCATCAACCACCACAGC+TGG | + | tig0024531:13837-13856 | Msa1417910:CDS | 60.0% | |
| CCACCAGCTGTGGTGGTTGA+TGG | - | tig0024531:13843-13862 | None:intergenic | 60.0% | |
| CCATCAACCACCACAGCTGG+TGG | + | tig0024531:13840-13859 | Msa1417910:CDS | 60.0% | |
| TCAACCACCACAGCTGGTGG+TGG | + | tig0024531:13843-13862 | Msa1417910:CDS | 60.0% | |
| ATCCACACCACCACCAGCTG+TGG | - | tig0024531:13853-13872 | None:intergenic | 60.0% | |
| ! | CCGCGGTGATGATGTGCAAC+TGG | - | tig0024531:13963-13982 | None:intergenic | 60.0% |
| GTTGCACATCATCACCGCGG+AGG | + | tig0024531:13963-13982 | Msa1417910:CDS | 60.0% | |
| ! | TTAGGCATTGCCGCCTGTGG+TGG | - | tig0024531:14074-14093 | None:intergenic | 60.0% |
| ! | CGATTAGGCATTGCCGCCTG+TGG | - | tig0024531:14077-14096 | None:intergenic | 60.0% |
| AGGAGGGGGAAGCAAGAGCA+AGG | + | tig0024531:13017-13036 | Msa1417910:CDS | 60.0% | |
| GGAGGGGGAAGCAAGAGCAA+GGG | + | tig0024531:13018-13037 | Msa1417910:CDS | 60.0% | |
| GCAATTCAGCACGTCCACGG+TGG | - | tig0024531:13407-13426 | None:intergenic | 60.0% | |
| AAAGGCAGTGGAGGAGGAGG+AGG | - | tig0024531:13522-13541 | None:intergenic | 60.0% | |
| GGTGATCAGCAGCAGGAGCA+GGG | - | tig0024531:13749-13768 | None:intergenic | 60.0% | |
| AGGTGATCAGCAGCAGGAGC+AGG | - | tig0024531:13750-13769 | None:intergenic | 60.0% | |
| ! | TGGTGGCGTAATTGGCGAGG+AGG | - | tig0024531:13823-13842 | None:intergenic | 60.0% |
| !! | CCAGCTGTGGTGGTTGATGG+TGG | - | tig0024531:13840-13859 | None:intergenic | 60.0% |
| CCACCATCAACCACCACAGC+TGG | + | tig0024531:13837-13856 | Msa1417910:CDS | 60.0% | |
| CCACCAGCTGTGGTGGTTGA+TGG | - | tig0024531:13843-13862 | None:intergenic | 60.0% | |
| CCATCAACCACCACAGCTGG+TGG | + | tig0024531:13840-13859 | Msa1417910:CDS | 60.0% | |
| TCAACCACCACAGCTGGTGG+TGG | + | tig0024531:13843-13862 | Msa1417910:CDS | 60.0% | |
| ATCCACACCACCACCAGCTG+TGG | - | tig0024531:13853-13872 | None:intergenic | 60.0% | |
| ! | CCGCGGTGATGATGTGCAAC+TGG | - | tig0024531:13963-13982 | None:intergenic | 60.0% |
| GTTGCACATCATCACCGCGG+AGG | + | tig0024531:13963-13982 | Msa1417910:CDS | 60.0% | |
| ! | TTAGGCATTGCCGCCTGTGG+TGG | - | tig0024531:14074-14093 | None:intergenic | 60.0% |
| ! | CGATTAGGCATTGCCGCCTG+TGG | - | tig0024531:14077-14096 | None:intergenic | 60.0% |
| GGATGAGGAGGAGGAGGAGG+AGG | + | tig0024531:13086-13105 | Msa1417910:CDS | 65.0% | |
| GATCAGCAGCAGGAGCAGGG+TGG | - | tig0024531:13746-13765 | None:intergenic | 65.0% | |
| CACACCACCACCAGCTGTGG+TGG | - | tig0024531:13850-13869 | None:intergenic | 65.0% | |
| !! | CACCACAGCTGGTGGTGGTG+TGG | + | tig0024531:13848-13867 | Msa1417910:CDS | 65.0% |
| GGATGAGGAGGAGGAGGAGG+AGG | + | tig0024531:13086-13105 | Msa1417910:CDS | 65.0% | |
| GATCAGCAGCAGGAGCAGGG+TGG | - | tig0024531:13746-13765 | None:intergenic | 65.0% | |
| CACACCACCACCAGCTGTGG+TGG | - | tig0024531:13850-13869 | None:intergenic | 65.0% | |
| !! | CACCACAGCTGGTGGTGGTG+TGG | + | tig0024531:13848-13867 | Msa1417910:CDS | 65.0% |
| CAGCAGCAGGAGCAGGGTGG+TGG | - | tig0024531:13743-13762 | None:intergenic | 70.0% | |
| CAGCAGCAGGAGCAGGGTGG+TGG | - | tig0024531:13743-13762 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024531 | gene | 12807 | 14214 | 12807 | ID=Msa1417910;Name=Msa1417910 |
| tig0024531 | mRNA | 12807 | 14214 | 12807 | ID=Msa1417910-mRNA-1;Parent=Msa1417910;Name=Msa1417910-mRNA-1;_AED=0.01;_eAED=0.02;_QI=0|0|0|0.5|1|1|2|0|431 |
| tig0024531 | exon | 12807 | 12815 | 12807 | ID=Msa1417910-mRNA-1:exon:121;Parent=Msa1417910-mRNA-1 |
| tig0024531 | exon | 12928 | 14214 | 12928 | ID=Msa1417910-mRNA-1:exon:122;Parent=Msa1417910-mRNA-1 |
| tig0024531 | CDS | 12807 | 12815 | 12807 | ID=Msa1417910-mRNA-1:cds;Parent=Msa1417910-mRNA-1 |
| tig0024531 | CDS | 12928 | 14214 | 12928 | ID=Msa1417910-mRNA-1:cds;Parent=Msa1417910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
