Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421140 | sp|Q8L3W1|VRN1_ARATH | 48.485 | 99 | 51 | 0 | 21 | 119 | 6 | 104 | 5.82e-25 | 104 |
| Msa1421140 | sp|Q8L3W1|VRN1_ARATH | 34.247 | 146 | 74 | 5 | 134 | 273 | 212 | 341 | 3.56e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421140 | G7KE59 | 90.511 | 274 | 26 | 0 | 1 | 274 | 1 | 274 | 0.0 | 518 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1421140 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421140 | MtrunA17_Chr5g0429931 | 90.377 | 239 | 23 | 0 | 36 | 274 | 10 | 248 | 4.88e-163 | 452 |
| Msa1421140 | MtrunA17_Chr3g0077451 | 71.967 | 239 | 56 | 2 | 35 | 272 | 10 | 238 | 6.67e-121 | 345 |
| Msa1421140 | MtrunA17_Chr3g0077411 | 66.415 | 265 | 81 | 2 | 16 | 272 | 257 | 521 | 5.93e-119 | 350 |
| Msa1421140 | MtrunA17_Chr3g0077411 | 54.511 | 266 | 94 | 3 | 1 | 262 | 1 | 243 | 1.84e-89 | 275 |
| Msa1421140 | MtrunA17_Chr3g0077431 | 70.335 | 209 | 51 | 2 | 65 | 272 | 1 | 199 | 4.84e-102 | 296 |
| Msa1421140 | MtrunA17_Chr3g0077421 | 66.667 | 210 | 58 | 2 | 65 | 272 | 1 | 200 | 8.87e-96 | 280 |
| Msa1421140 | MtrunA17_Chr3g0077441 | 66.667 | 210 | 58 | 2 | 65 | 272 | 1 | 200 | 8.87e-96 | 280 |
| Msa1421140 | MtrunA17_Chr3g0077361 | 56.554 | 267 | 92 | 3 | 1 | 265 | 20 | 264 | 2.29e-93 | 284 |
| Msa1421140 | MtrunA17_Chr3g0077361 | 55.212 | 259 | 81 | 1 | 16 | 274 | 284 | 507 | 1.43e-89 | 275 |
| Msa1421140 | MtrunA17_Chr4g0009491 | 61.611 | 211 | 81 | 0 | 16 | 226 | 220 | 430 | 1.95e-85 | 261 |
| Msa1421140 | MtrunA17_Chr4g0009491 | 52.113 | 213 | 80 | 1 | 35 | 247 | 11 | 201 | 1.64e-65 | 210 |
| Msa1421140 | MtrunA17_Chr3g0077461 | 54.789 | 261 | 96 | 7 | 10 | 266 | 225 | 467 | 1.95e-82 | 255 |
| Msa1421140 | MtrunA17_Chr3g0077461 | 51.055 | 237 | 85 | 3 | 36 | 271 | 22 | 228 | 1.98e-71 | 226 |
| Msa1421140 | MtrunA17_Chr3g0077381 | 59.716 | 211 | 78 | 1 | 16 | 226 | 242 | 445 | 4.36e-80 | 248 |
| Msa1421140 | MtrunA17_Chr3g0077381 | 50.644 | 233 | 69 | 3 | 35 | 265 | 34 | 222 | 3.62e-64 | 207 |
| Msa1421140 | MtrunA17_Chr1g0162441 | 48.485 | 99 | 51 | 0 | 21 | 119 | 7 | 105 | 1.24e-29 | 115 |
| Msa1421140 | MtrunA17_Chr1g0162441 | 34.266 | 143 | 69 | 5 | 134 | 268 | 267 | 392 | 2.84e-12 | 66.2 |
| Msa1421140 | MtrunA17_Chr7g0233521 | 28.938 | 273 | 148 | 8 | 37 | 271 | 2 | 266 | 5.12e-27 | 106 |
| Msa1421140 | MtrunA17_Chr3g0131891 | 28.041 | 296 | 174 | 8 | 14 | 271 | 12 | 306 | 1.40e-26 | 105 |
| Msa1421140 | MtrunA17_Chr4g0033961 | 36.025 | 161 | 97 | 2 | 18 | 173 | 3 | 162 | 7.99e-26 | 105 |
| Msa1421140 | MtrunA17_Chr4g0033961 | 34.247 | 146 | 71 | 5 | 134 | 271 | 263 | 391 | 2.83e-13 | 69.3 |
| Msa1421140 | MtrunA17_Chr3g0103171 | 29.104 | 268 | 147 | 7 | 36 | 267 | 5 | 265 | 1.97e-25 | 101 |
| Msa1421140 | MtrunA17_Chr8g0390841 | 25.667 | 300 | 164 | 7 | 21 | 268 | 39 | 331 | 2.68e-25 | 104 |
| Msa1421140 | MtrunA17_Chr3g0103181 | 27.437 | 277 | 164 | 6 | 20 | 267 | 11 | 279 | 1.45e-24 | 99.4 |
| Msa1421140 | MtrunA17_Chr1g0162411 | 48.889 | 90 | 46 | 0 | 21 | 110 | 7 | 96 | 4.23e-24 | 100 |
| Msa1421140 | MtrunA17_Chr7g0233561 | 27.575 | 301 | 167 | 8 | 20 | 271 | 17 | 315 | 2.39e-23 | 97.1 |
| Msa1421140 | MtrunA17_Chr1g0208771 | 25.436 | 287 | 154 | 8 | 36 | 269 | 12 | 291 | 8.91e-21 | 91.3 |
| Msa1421140 | MtrunA17_Chr1g0163071 | 25.676 | 296 | 146 | 8 | 37 | 268 | 2 | 287 | 5.02e-20 | 87.8 |
| Msa1421140 | MtrunA17_Chr1g0154161 | 23.592 | 284 | 179 | 6 | 20 | 269 | 29 | 308 | 5.53e-20 | 87.8 |
| Msa1421140 | MtrunA17_Chr7g0233571 | 33.835 | 133 | 76 | 1 | 20 | 140 | 9 | 141 | 7.92e-20 | 85.5 |
| Msa1421140 | MtrunA17_Chr5g0421921 | 40.566 | 106 | 62 | 1 | 167 | 272 | 8 | 112 | 8.13e-20 | 82.4 |
| Msa1421140 | MtrunA17_Chr5g0421731 | 40.566 | 106 | 62 | 1 | 167 | 272 | 8 | 112 | 8.13e-20 | 82.4 |
| Msa1421140 | MtrunA17_Chr5g0419201 | 29.697 | 165 | 105 | 2 | 21 | 185 | 16 | 169 | 9.14e-20 | 84.7 |
| Msa1421140 | MtrunA17_Chr7g0233531 | 27.737 | 274 | 150 | 7 | 37 | 271 | 2 | 266 | 1.88e-19 | 85.5 |
| Msa1421140 | MtrunA17_Chr5g0421851 | 40.566 | 106 | 62 | 1 | 167 | 272 | 83 | 187 | 3.74e-19 | 82.8 |
| Msa1421140 | MtrunA17_Chr7g0233541 | 25.685 | 292 | 150 | 8 | 37 | 271 | 2 | 283 | 4.52e-19 | 84.7 |
| Msa1421140 | MtrunA17_Chr1g0163221 | 26.102 | 295 | 173 | 8 | 12 | 267 | 2 | 290 | 7.62e-19 | 85.1 |
| Msa1421140 | MtrunA17_Chr3g0103151 | 40.000 | 100 | 58 | 1 | 20 | 119 | 11 | 108 | 7.06e-18 | 78.6 |
| Msa1421140 | MtrunA17_Chr1g0162421 | 50.000 | 58 | 29 | 0 | 35 | 92 | 7 | 64 | 8.80e-18 | 75.5 |
| Msa1421140 | MtrunA17_Chr3g0103191 | 35.172 | 145 | 87 | 3 | 21 | 163 | 12 | 151 | 1.94e-17 | 79.7 |
| Msa1421140 | MtrunA17_Chr4g0067431 | 26.174 | 298 | 170 | 10 | 20 | 267 | 14 | 311 | 1.02e-15 | 75.9 |
| Msa1421140 | MtrunA17_Chr6g0467351 | 31.655 | 139 | 91 | 2 | 20 | 154 | 14 | 152 | 8.99e-15 | 72.0 |
| Msa1421140 | MtrunA17_Chr1g0163261 | 25.175 | 286 | 171 | 10 | 19 | 269 | 7 | 284 | 3.20e-14 | 71.2 |
| Msa1421140 | MtrunA17_Chr3g0103201 | 23.894 | 226 | 124 | 6 | 80 | 267 | 5 | 220 | 3.12e-13 | 67.4 |
| Msa1421140 | MtrunA17_Chr1g0163251 | 22.794 | 272 | 176 | 8 | 30 | 270 | 14 | 282 | 3.28e-13 | 68.9 |
| Msa1421140 | MtrunA17_Chr1g0154131 | 23.985 | 271 | 157 | 11 | 29 | 274 | 32 | 278 | 3.73e-13 | 68.9 |
| Msa1421140 | MtrunA17_Chr1g0171611 | 25.092 | 271 | 174 | 9 | 19 | 269 | 7 | 268 | 1.29e-12 | 66.6 |
| Msa1421140 | MtrunA17_Chr1g0154041 | 30.928 | 97 | 66 | 1 | 20 | 116 | 15 | 110 | 2.14e-12 | 67.0 |
| Msa1421140 | MtrunA17_Chr1g0163061 | 30.769 | 130 | 80 | 2 | 20 | 139 | 14 | 143 | 4.00e-12 | 65.1 |
| Msa1421140 | MtrunA17_Chr1g0154101 | 31.579 | 95 | 65 | 0 | 20 | 114 | 24 | 118 | 1.68e-11 | 64.3 |
| Msa1421140 | MtrunA17_Chr1g0154101 | 34.737 | 95 | 60 | 2 | 20 | 114 | 183 | 275 | 3.92e-11 | 63.2 |
| Msa1421140 | MtrunA17_Chr1g0163231 | 23.273 | 275 | 182 | 9 | 21 | 269 | 9 | 280 | 2.65e-11 | 62.8 |
| Msa1421140 | MtrunA17_Chr1g0154191 | 33.684 | 95 | 63 | 0 | 20 | 114 | 21 | 115 | 7.10e-11 | 62.0 |
| Msa1421140 | MtrunA17_Chr1g0154171 | 36.709 | 79 | 50 | 0 | 33 | 111 | 34 | 112 | 7.97e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421140 | AT3G18990.1 | 48.485 | 99 | 51 | 0 | 21 | 119 | 6 | 104 | 5.91e-26 | 104 |
| Msa1421140 | AT3G18990.1 | 34.247 | 146 | 74 | 5 | 134 | 273 | 212 | 341 | 3.62e-12 | 66.2 |
| Msa1421140 | AT3G18990.2 | 48.485 | 99 | 51 | 0 | 21 | 119 | 6 | 104 | 1.15e-25 | 104 |
| Msa1421140 | AT3G18990.2 | 34.694 | 147 | 74 | 5 | 134 | 274 | 212 | 342 | 1.71e-12 | 67.0 |
| Msa1421140 | AT4G01580.1 | 40.367 | 109 | 65 | 0 | 13 | 121 | 22 | 130 | 2.02e-20 | 86.7 |
| Msa1421140 | AT3G18960.2 | 38.889 | 108 | 66 | 0 | 14 | 121 | 23 | 130 | 5.99e-19 | 82.8 |
| Msa1421140 | AT3G18960.1 | 38.889 | 108 | 66 | 0 | 14 | 121 | 23 | 130 | 9.12e-19 | 82.8 |
| Msa1421140 | AT1G49475.1 | 38.793 | 116 | 70 | 1 | 14 | 129 | 27 | 141 | 1.89e-18 | 81.3 |
| Msa1421140 | AT3G18960.3 | 38.636 | 88 | 54 | 0 | 34 | 121 | 6 | 93 | 2.54e-13 | 67.0 |
| Msa1421140 | AT1G49480.3 | 32.919 | 161 | 82 | 6 | 123 | 273 | 82 | 226 | 5.07e-13 | 67.4 |
| Msa1421140 | AT1G49480.1 | 32.919 | 161 | 82 | 6 | 123 | 273 | 82 | 226 | 5.07e-13 | 67.4 |
| Msa1421140 | AT1G49480.2 | 32.919 | 161 | 82 | 6 | 123 | 273 | 82 | 226 | 5.07e-13 | 67.4 |
Find 53 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAGCTTTATAGGAATATT+TGG | 0.189992 | tig0024918:+12450 | None:intergenic |
| ACTGCTCTCCATGAGAATTT+TGG | 0.201463 | tig0024918:+12430 | None:intergenic |
| CCCCTCACTATTTGCATTGC+TGG | 0.224390 | tig0024918:+12372 | None:intergenic |
| AGTGAAGCTTACTATTTCTT+TGG | 0.231343 | tig0024918:+14111 | None:intergenic |
| GATGAATTTATATCAAGATT+TGG | 0.269670 | tig0024918:-13014 | Msa1421140:CDS |
| CAACGAAAATAAGGGTTGTT+TGG | 0.270085 | tig0024918:+12612 | None:intergenic |
| TACTATTTCTTTGGAATGAA+TGG | 0.303913 | tig0024918:+14120 | None:intergenic |
| AGATGGTCGTGTCTGGAAAA+TGG | 0.306967 | tig0024918:-12955 | Msa1421140:CDS |
| ATGAATTTATATCAAGATTT+GGG | 0.336114 | tig0024918:-13013 | Msa1421140:CDS |
| ATGAATGGGTGAGGGAAGTA+TGG | 0.359095 | tig0024918:+14135 | None:intergenic |
| TCCCTTCATATTTGAAAGAA+AGG | 0.361097 | tig0024918:+12847 | None:intergenic |
| ATTATCCTAGTTCTAGAAAA+AGG | 0.363374 | tig0024918:-12731 | Msa1421140:CDS |
| AACGAAAATAAGGGTTGTTT+GGG | 0.366185 | tig0024918:+12613 | None:intergenic |
| GAATACTATTCTATAGGATA+TGG | 0.373789 | tig0024918:-12876 | Msa1421140:CDS |
| ATGTGAGAGGCGTGGGAAAA+AGG | 0.385584 | tig0024918:-12694 | Msa1421140:CDS |
| TTCCTTTCTTTCAAATATGA+AGG | 0.389522 | tig0024918:-12849 | Msa1421140:CDS |
| AATCTTGATATAAATTCATC+TGG | 0.413169 | tig0024918:+13017 | None:intergenic |
| CTGTTCCAGATGGTCGTGTC+TGG | 0.416931 | tig0024918:-12962 | Msa1421140:CDS |
| GTTGTTTGGGTTGAGTTCCT+TGG | 0.432159 | tig0024918:+12626 | None:intergenic |
| ACTATTTCTTTGGAATGAAT+GGG | 0.437997 | tig0024918:+14121 | None:intergenic |
| TTTGTAGAATACTATTCTAT+AGG | 0.438154 | tig0024918:-12882 | Msa1421140:CDS |
| GGAGAGCAGTGGGTAGTGTT+TGG | 0.444007 | tig0024918:-12417 | Msa1421140:CDS |
| TTCTTTGGAATGAATGGGTG+AGG | 0.464859 | tig0024918:+14126 | None:intergenic |
| CCTCTCACATGTTTCAACCT+TGG | 0.481695 | tig0024918:+12707 | None:intergenic |
| CTCGCCGGCGAAAGTGTGTC+CGG | 0.493553 | tig0024918:-14198 | Msa1421140:CDS |
| CCTTCTCCGGTGATGATGTC+CGG | 0.498771 | tig0024918:+14179 | None:intergenic |
| ATAAAGCTCCAAAATTCTCA+TGG | 0.500218 | tig0024918:-12438 | Msa1421140:CDS |
| CACAATAATCTCCATGTGAC+AGG | 0.508749 | tig0024918:+12322 | None:intergenic |
| TCCTTTCTTTCAAATATGAA+GGG | 0.512330 | tig0024918:-12848 | Msa1421140:CDS |
| TTGCAACAATGCAGCCTCGC+CGG | 0.517685 | tig0024918:-14213 | None:intergenic |
| CCGGACATCATCACCGGAGA+AGG | 0.524281 | tig0024918:-14179 | Msa1421140:CDS |
| TCTTTGGAATGAATGGGTGA+GGG | 0.542125 | tig0024918:+14127 | None:intergenic |
| TTGAAACATGTGAGAGGCGT+GGG | 0.548958 | tig0024918:-12701 | Msa1421140:CDS |
| TTTCGTTGCAAAATCGTCAA+GGG | 0.551442 | tig0024918:-12597 | Msa1421140:CDS |
| TTCAAAACTTCGAGTACTAA+CGG | 0.553811 | tig0024918:-12768 | Msa1421140:CDS |
| AAGAGTAGAGGATGCTGCCA+AGG | 0.559277 | tig0024918:-12643 | Msa1421140:CDS |
| ATGTCCGGACACACTTTCGC+CGG | 0.577646 | tig0024918:+14194 | None:intergenic |
| TGAGCTGATCAAGAGGAGGC+CGG | 0.579304 | tig0024918:-12295 | Msa1421140:CDS |
| GTGTGTCCGGACATCATCAC+CGG | 0.579924 | tig0024918:-14185 | Msa1421140:CDS |
| ACCAGCAATGCAAATAGTGA+GGG | 0.598487 | tig0024918:-12373 | Msa1421140:CDS |
| AAATTCTCATGGAGAGCAGT+GGG | 0.599658 | tig0024918:-12427 | Msa1421140:CDS |
| AGGGACAACAACCTGTCACA+TGG | 0.606824 | tig0024918:-12333 | Msa1421140:CDS |
| AAAATTCTCATGGAGAGCAG+TGG | 0.611008 | tig0024918:-12428 | Msa1421140:CDS |
| ATATGCTTCTAAAAGAGTAG+AGG | 0.611088 | tig0024918:-12655 | Msa1421140:CDS |
| GTTGAAACATGTGAGAGGCG+TGG | 0.612877 | tig0024918:-12702 | Msa1421140:CDS |
| CACCAGCAATGCAAATAGTG+AGG | 0.613032 | tig0024918:-12374 | Msa1421140:CDS |
| GCTACAATTACTGTTCCAGA+TGG | 0.621864 | tig0024918:-12972 | Msa1421140:CDS |
| CCAAGGTTGAAACATGTGAG+AGG | 0.654125 | tig0024918:-12707 | Msa1421140:CDS |
| CGGACACACTTTCGCCGGCG+AGG | 0.660589 | tig0024918:+14199 | None:intergenic |
| GTGTGTTTGAGCTGATCAAG+AGG | 0.667194 | tig0024918:-12302 | Msa1421140:CDS |
| AATCGTCAAGGGAAAATATG+CGG | 0.692781 | tig0024918:-12586 | Msa1421140:intron |
| CCAGCAATGCAAATAGTGAG+GGG | 0.692866 | tig0024918:-12372 | Msa1421140:CDS |
| TGTTTGAGCTGATCAAGAGG+AGG | 0.730047 | tig0024918:-12299 | Msa1421140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAGTCAAAA+AGG | + | tig0024918:12465-12484 | None:intergenic | 10.0% |
| !!! | TTTTTGACTTTTTTTTTTTT+TGG | - | tig0024918:12464-12483 | Msa1421140:CDS | 10.0% |
| !! | AAAAAAAAAAAAAGTCAAAA+AGG | + | tig0024918:12465-12484 | None:intergenic | 10.0% |
| !!! | TTTTTGACTTTTTTTTTTTT+TGG | - | tig0024918:12464-12483 | Msa1421140:CDS | 10.0% |
| !!! | ATAATAAAAGTACAAAACAA+GGG | + | tig0024918:12374-12393 | None:intergenic | 15.0% |
| !!! | AAAATTGATTTTGACATATT+TGG | - | tig0024918:12637-12656 | Msa1421140:CDS | 15.0% |
| !!! | ATAAATTCTAATTTGAAGTT+AGG | + | tig0024918:13196-13215 | None:intergenic | 15.0% |
| !! | ATGAATTTATATCAAGATTT+GGG | - | tig0024918:13440-13459 | Msa1421140:intron | 15.0% |
| !!! | ATAATAAAAGTACAAAACAA+GGG | + | tig0024918:12374-12393 | None:intergenic | 15.0% |
| !!! | AAAATTGATTTTGACATATT+TGG | - | tig0024918:12637-12656 | Msa1421140:CDS | 15.0% |
| !!! | ATAAATTCTAATTTGAAGTT+AGG | + | tig0024918:13196-13215 | None:intergenic | 15.0% |
| !! | ATGAATTTATATCAAGATTT+GGG | - | tig0024918:13440-13459 | Msa1421140:intron | 15.0% |
| !!! | CATAATAAAAGTACAAAACA+AGG | + | tig0024918:12375-12394 | None:intergenic | 20.0% |
| !! | ATTAAATTCTAACTTCAAGT+TGG | + | tig0024918:12704-12723 | None:intergenic | 20.0% |
| !! | CTTGAAGTTAGAATTTAATT+TGG | - | tig0024918:12705-12724 | Msa1421140:CDS | 20.0% |
| !! | AATCTTGATATAAATTCATC+TGG | + | tig0024918:13439-13458 | None:intergenic | 20.0% |
| !! | GATGAATTTATATCAAGATT+TGG | - | tig0024918:13439-13458 | Msa1421140:intron | 20.0% |
| !! | TTTGTAGAATACTATTCTAT+AGG | - | tig0024918:13571-13590 | Msa1421140:intron | 20.0% |
| !!! | CATAATAAAAGTACAAAACA+AGG | + | tig0024918:12375-12394 | None:intergenic | 20.0% |
| !! | ATTAAATTCTAACTTCAAGT+TGG | + | tig0024918:12704-12723 | None:intergenic | 20.0% |
| !! | CTTGAAGTTAGAATTTAATT+TGG | - | tig0024918:12705-12724 | Msa1421140:CDS | 20.0% |
| !! | AATCTTGATATAAATTCATC+TGG | + | tig0024918:13439-13458 | None:intergenic | 20.0% |
| !! | GATGAATTTATATCAAGATT+TGG | - | tig0024918:13439-13458 | Msa1421140:intron | 20.0% |
| !! | TTTGTAGAATACTATTCTAT+AGG | - | tig0024918:13571-13590 | Msa1421140:intron | 20.0% |
| !!! | ACTATTTCTTTGGAATGAAT+GGG | + | tig0024918:12335-12354 | None:intergenic | 25.0% |
| !!! | TACTATTTCTTTGGAATGAA+TGG | + | tig0024918:12336-12355 | None:intergenic | 25.0% |
| !! | TGAGTGTTTCTTTTATTCAA+TGG | - | tig0024918:12526-12545 | Msa1421140:intron | 25.0% |
| ! | ATCACTTTCAATTCAACTAA+GGG | + | tig0024918:12776-12795 | None:intergenic | 25.0% |
| ! | AATCACTTTCAATTCAACTA+AGG | + | tig0024918:12777-12796 | None:intergenic | 25.0% |
| ! | CATACTTTACTTAGTATGTT+TGG | - | tig0024918:12805-12824 | Msa1421140:CDS | 25.0% |
| !!! | AGAATTGATTTTGACATGTT+TGG | - | tig0024918:12867-12886 | Msa1421140:CDS | 25.0% |
| !!! | GTAGATTTTGATTCTTGAAT+TGG | - | tig0024918:12947-12966 | Msa1421140:CDS | 25.0% |
| !!! | TGATTCTCTAGAATTGATTT+TGG | + | tig0024918:13057-13076 | None:intergenic | 25.0% |
| ! | GAATACTATTCTATAGGATA+TGG | - | tig0024918:13577-13596 | Msa1421140:intron | 25.0% |
| ! | TTCCTTTCTTTCAAATATGA+AGG | - | tig0024918:13604-13623 | Msa1421140:intron | 25.0% |
| ! | TCCTTTCTTTCAAATATGAA+GGG | - | tig0024918:13605-13624 | Msa1421140:intron | 25.0% |
| !!! | GAACTAGGATAATTTGTTTT+TGG | + | tig0024918:13715-13734 | None:intergenic | 25.0% |
| !!! | ATTATCCTAGTTCTAGAAAA+AGG | - | tig0024918:13722-13741 | Msa1421140:intron | 25.0% |
| ! | AAAATTAACATACTGCACAA+TGG | + | tig0024918:13959-13978 | None:intergenic | 25.0% |
| !! | GGGATTTTCTATATTTCAAA+GGG | - | tig0024918:14101-14120 | Msa1421140:intron | 25.0% |
| !!! | ACTATTTCTTTGGAATGAAT+GGG | + | tig0024918:12335-12354 | None:intergenic | 25.0% |
| !!! | TACTATTTCTTTGGAATGAA+TGG | + | tig0024918:12336-12355 | None:intergenic | 25.0% |
| !! | TGAGTGTTTCTTTTATTCAA+TGG | - | tig0024918:12526-12545 | Msa1421140:intron | 25.0% |
| ! | ATCACTTTCAATTCAACTAA+GGG | + | tig0024918:12776-12795 | None:intergenic | 25.0% |
| ! | AATCACTTTCAATTCAACTA+AGG | + | tig0024918:12777-12796 | None:intergenic | 25.0% |
| ! | CATACTTTACTTAGTATGTT+TGG | - | tig0024918:12805-12824 | Msa1421140:CDS | 25.0% |
| !!! | AGAATTGATTTTGACATGTT+TGG | - | tig0024918:12867-12886 | Msa1421140:CDS | 25.0% |
| !!! | GTAGATTTTGATTCTTGAAT+TGG | - | tig0024918:12947-12966 | Msa1421140:CDS | 25.0% |
| !!! | TGATTCTCTAGAATTGATTT+TGG | + | tig0024918:13057-13076 | None:intergenic | 25.0% |
| ! | GAATACTATTCTATAGGATA+TGG | - | tig0024918:13577-13596 | Msa1421140:intron | 25.0% |
| ! | TTCCTTTCTTTCAAATATGA+AGG | - | tig0024918:13604-13623 | Msa1421140:intron | 25.0% |
| ! | TCCTTTCTTTCAAATATGAA+GGG | - | tig0024918:13605-13624 | Msa1421140:intron | 25.0% |
| !!! | GAACTAGGATAATTTGTTTT+TGG | + | tig0024918:13715-13734 | None:intergenic | 25.0% |
| !!! | ATTATCCTAGTTCTAGAAAA+AGG | - | tig0024918:13722-13741 | Msa1421140:intron | 25.0% |
| ! | AAAATTAACATACTGCACAA+TGG | + | tig0024918:13959-13978 | None:intergenic | 25.0% |
| !! | GGGATTTTCTATATTTCAAA+GGG | - | tig0024918:14101-14120 | Msa1421140:intron | 25.0% |
| !!! | AAATGTTTTGATTCCTTCTC+CGG | + | tig0024918:12290-12309 | None:intergenic | 30.0% |
| ! | AGTGAAGCTTACTATTTCTT+TGG | + | tig0024918:12345-12364 | None:intergenic | 30.0% |
| !!! | ATTTTGAGTTAGTGTGTGTT+TGG | - | tig0024918:12575-12594 | Msa1421140:intron | 30.0% |
| !! | CTTCAAGTTGGAAACAATTA+TGG | + | tig0024918:12692-12711 | None:intergenic | 30.0% |
| !! | CTTAAAGTGAATGGATTTTG+AGG | + | tig0024918:12918-12937 | None:intergenic | 30.0% |
| AAATCCATTCACTTTAAGCT+AGG | - | tig0024918:12920-12939 | Msa1421140:CDS | 30.0% | |
| AAATCCTAGCTTAAAGTGAA+TGG | + | tig0024918:12927-12946 | None:intergenic | 30.0% | |
| ! | ATCCAAACACAAATCACTTT+TGG | - | tig0024918:13015-13034 | Msa1421140:CDS | 30.0% |
| AAATTTATGTTCGCAGCTTT+GGG | + | tig0024918:13239-13258 | None:intergenic | 30.0% | |
| AAAATTTATGTTCGCAGCTT+TGG | + | tig0024918:13240-13259 | None:intergenic | 30.0% | |
| ! | ACGTTTTCTTTTGCAACAAA+TGG | - | tig0024918:13542-13561 | Msa1421140:intron | 30.0% |
| TCCCTTCATATTTGAAAGAA+AGG | + | tig0024918:13609-13628 | None:intergenic | 30.0% | |
| !!! | TTAGTACTCGAAGTTTTGAA+AGG | + | tig0024918:13685-13704 | None:intergenic | 30.0% |
| TTCAAAACTTCGAGTACTAA+CGG | - | tig0024918:13685-13704 | Msa1421140:intron | 30.0% | |
| ! | ATATGCTTCTAAAAGAGTAG+AGG | - | tig0024918:13798-13817 | Msa1421140:intron | 30.0% |
| AACGAAAATAAGGGTTGTTT+GGG | + | tig0024918:13843-13862 | None:intergenic | 30.0% | |
| ! | CGATTTTGCAACGAAAATAA+GGG | + | tig0024918:13852-13871 | None:intergenic | 30.0% |
| ! | ACGATTTTGCAACGAAAATA+AGG | + | tig0024918:13853-13872 | None:intergenic | 30.0% |
| ! | TGGAGCTTTATAGGAATATT+TGG | + | tig0024918:14006-14025 | None:intergenic | 30.0% |
| !!! | TGAGAATTTTGGAGCTTTAT+AGG | + | tig0024918:14015-14034 | None:intergenic | 30.0% |
| ATAAAGCTCCAAAATTCTCA+TGG | - | tig0024918:14015-14034 | Msa1421140:intron | 30.0% | |
| ! | GGGGATTTTCTATATTTCAA+AGG | - | tig0024918:14100-14119 | Msa1421140:intron | 30.0% |
| !!! | AAATGTTTTGATTCCTTCTC+CGG | + | tig0024918:12290-12309 | None:intergenic | 30.0% |
| ! | AGTGAAGCTTACTATTTCTT+TGG | + | tig0024918:12345-12364 | None:intergenic | 30.0% |
| !!! | ATTTTGAGTTAGTGTGTGTT+TGG | - | tig0024918:12575-12594 | Msa1421140:intron | 30.0% |
| !! | CTTCAAGTTGGAAACAATTA+TGG | + | tig0024918:12692-12711 | None:intergenic | 30.0% |
| !! | CTTAAAGTGAATGGATTTTG+AGG | + | tig0024918:12918-12937 | None:intergenic | 30.0% |
| AAATCCATTCACTTTAAGCT+AGG | - | tig0024918:12920-12939 | Msa1421140:CDS | 30.0% | |
| AAATCCTAGCTTAAAGTGAA+TGG | + | tig0024918:12927-12946 | None:intergenic | 30.0% | |
| ! | ATCCAAACACAAATCACTTT+TGG | - | tig0024918:13015-13034 | Msa1421140:CDS | 30.0% |
| AAATTTATGTTCGCAGCTTT+GGG | + | tig0024918:13239-13258 | None:intergenic | 30.0% | |
| AAAATTTATGTTCGCAGCTT+TGG | + | tig0024918:13240-13259 | None:intergenic | 30.0% | |
| ! | ACGTTTTCTTTTGCAACAAA+TGG | - | tig0024918:13542-13561 | Msa1421140:intron | 30.0% |
| TCCCTTCATATTTGAAAGAA+AGG | + | tig0024918:13609-13628 | None:intergenic | 30.0% | |
| !!! | TTAGTACTCGAAGTTTTGAA+AGG | + | tig0024918:13685-13704 | None:intergenic | 30.0% |
| TTCAAAACTTCGAGTACTAA+CGG | - | tig0024918:13685-13704 | Msa1421140:intron | 30.0% | |
| ! | ATATGCTTCTAAAAGAGTAG+AGG | - | tig0024918:13798-13817 | Msa1421140:intron | 30.0% |
| AACGAAAATAAGGGTTGTTT+GGG | + | tig0024918:13843-13862 | None:intergenic | 30.0% | |
| ! | CGATTTTGCAACGAAAATAA+GGG | + | tig0024918:13852-13871 | None:intergenic | 30.0% |
| ! | ACGATTTTGCAACGAAAATA+AGG | + | tig0024918:13853-13872 | None:intergenic | 30.0% |
| ! | TGGAGCTTTATAGGAATATT+TGG | + | tig0024918:14006-14025 | None:intergenic | 30.0% |
| !!! | TGAGAATTTTGGAGCTTTAT+AGG | + | tig0024918:14015-14034 | None:intergenic | 30.0% |
| ATAAAGCTCCAAAATTCTCA+TGG | - | tig0024918:14015-14034 | Msa1421140:intron | 30.0% | |
| ! | GGGGATTTTCTATATTTCAA+AGG | - | tig0024918:14100-14119 | Msa1421140:intron | 30.0% |
| ! | GACATATTTGGAATGAGATG+AGG | - | tig0024918:12649-12668 | Msa1421140:CDS | 35.0% |
| ! | GACCAAAAGTGATTTGTGTT+TGG | + | tig0024918:13020-13039 | None:intergenic | 35.0% |
| ! | ACTCTAAAAGCAACTTAGAG+TGG | - | tig0024918:13158-13177 | Msa1421140:intron | 35.0% |
| CAGTTACTCTCATCAAGAAA+GGG | + | tig0024918:13320-13339 | None:intergenic | 35.0% | |
| TCAGTTACTCTCATCAAGAA+AGG | + | tig0024918:13321-13340 | None:intergenic | 35.0% | |
| TAGGACCAAACTTCAAAAGA+CGG | + | tig0024918:13372-13391 | None:intergenic | 35.0% | |
| TGGTCCTATAGTATAGTGAA+TGG | - | tig0024918:13384-13403 | Msa1421140:intron | 35.0% | |
| CACACCATTCACTATACTAT+AGG | + | tig0024918:13391-13410 | None:intergenic | 35.0% | |
| !!! | TTGGACCTTTTTCTAGAACT+AGG | + | tig0024918:13730-13749 | None:intergenic | 35.0% |
| !! | TAGTTCTAGAAAAAGGTCCA+AGG | - | tig0024918:13729-13748 | Msa1421140:intron | 35.0% |
| CAACGAAAATAAGGGTTGTT+TGG | + | tig0024918:13844-13863 | None:intergenic | 35.0% | |
| ! | TTTTCGTTGCAAAATCGTCA+AGG | - | tig0024918:13855-13874 | Msa1421140:intron | 35.0% |
| TTTCGTTGCAAAATCGTCAA+GGG | - | tig0024918:13856-13875 | Msa1421140:intron | 35.0% | |
| AATCGTCAAGGGAAAATATG+CGG | - | tig0024918:13867-13886 | Msa1421140:intron | 35.0% | |
| ! | ATTGTGACTTTTAGCACAAC+CGG | + | tig0024918:14180-14199 | None:intergenic | 35.0% |
| ! | GACATATTTGGAATGAGATG+AGG | - | tig0024918:12649-12668 | Msa1421140:CDS | 35.0% |
| ! | GACCAAAAGTGATTTGTGTT+TGG | + | tig0024918:13020-13039 | None:intergenic | 35.0% |
| ! | ACTCTAAAAGCAACTTAGAG+TGG | - | tig0024918:13158-13177 | Msa1421140:intron | 35.0% |
| CAGTTACTCTCATCAAGAAA+GGG | + | tig0024918:13320-13339 | None:intergenic | 35.0% | |
| TCAGTTACTCTCATCAAGAA+AGG | + | tig0024918:13321-13340 | None:intergenic | 35.0% | |
| TAGGACCAAACTTCAAAAGA+CGG | + | tig0024918:13372-13391 | None:intergenic | 35.0% | |
| TGGTCCTATAGTATAGTGAA+TGG | - | tig0024918:13384-13403 | Msa1421140:intron | 35.0% | |
| CACACCATTCACTATACTAT+AGG | + | tig0024918:13391-13410 | None:intergenic | 35.0% | |
| !!! | TTGGACCTTTTTCTAGAACT+AGG | + | tig0024918:13730-13749 | None:intergenic | 35.0% |
| !! | TAGTTCTAGAAAAAGGTCCA+AGG | - | tig0024918:13729-13748 | Msa1421140:intron | 35.0% |
| CAACGAAAATAAGGGTTGTT+TGG | + | tig0024918:13844-13863 | None:intergenic | 35.0% | |
| ! | TTTTCGTTGCAAAATCGTCA+AGG | - | tig0024918:13855-13874 | Msa1421140:intron | 35.0% |
| TTTCGTTGCAAAATCGTCAA+GGG | - | tig0024918:13856-13875 | Msa1421140:intron | 35.0% | |
| AATCGTCAAGGGAAAATATG+CGG | - | tig0024918:13867-13886 | Msa1421140:intron | 35.0% | |
| ! | ATTGTGACTTTTAGCACAAC+CGG | + | tig0024918:14180-14199 | None:intergenic | 35.0% |
| !! | TCTTTGGAATGAATGGGTGA+GGG | + | tig0024918:12329-12348 | None:intergenic | 40.0% |
| !! | TTCTTTGGAATGAATGGGTG+AGG | + | tig0024918:12330-12349 | None:intergenic | 40.0% |
| ! | ATGTTTGGTTCCACTTCTAG+AGG | - | tig0024918:12820-12839 | Msa1421140:CDS | 40.0% |
| ! | TGTTTGGTTCCACTTCTAGA+GGG | - | tig0024918:12821-12840 | Msa1421140:CDS | 40.0% |
| ! | AATTCTAGTCCCTCTAGAAG+TGG | + | tig0024918:12833-12852 | None:intergenic | 40.0% |
| ! | AGAGGGACTAGAATTGATTC+TGG | - | tig0024918:12838-12857 | Msa1421140:CDS | 40.0% |
| CTTCTGATACAACGTGAGTT+TGG | + | tig0024918:13098-13117 | None:intergenic | 40.0% | |
| !!! | ATGTTTTGACACGTTTGGGT+AGG | + | tig0024918:13284-13303 | None:intergenic | 40.0% |
| !!! | GTGCATGTTTTGACACGTTT+GGG | + | tig0024918:13288-13307 | None:intergenic | 40.0% |
| !!! | AGTGCATGTTTTGACACGTT+TGG | + | tig0024918:13289-13308 | None:intergenic | 40.0% |
| !!! | GTAAGCCGTCTTTTGAAGTT+TGG | - | tig0024918:13364-13383 | Msa1421140:intron | 40.0% |
| GCTACAATTACTGTTCCAGA+TGG | - | tig0024918:13481-13500 | Msa1421140:intron | 40.0% | |
| ! | ACTGCTCTCCATGAGAATTT+TGG | + | tig0024918:14026-14045 | None:intergenic | 40.0% |
| AAAATTCTCATGGAGAGCAG+TGG | - | tig0024918:14025-14044 | Msa1421140:intron | 40.0% | |
| AAATTCTCATGGAGAGCAGT+GGG | - | tig0024918:14026-14045 | Msa1421140:intron | 40.0% | |
| ACCAGCAATGCAAATAGTGA+GGG | - | tig0024918:14080-14099 | Msa1421140:intron | 40.0% | |
| CACAATAATCTCCATGTGAC+AGG | + | tig0024918:14134-14153 | None:intergenic | 40.0% | |
| !! | TCTTTGGAATGAATGGGTGA+GGG | + | tig0024918:12329-12348 | None:intergenic | 40.0% |
| !! | TTCTTTGGAATGAATGGGTG+AGG | + | tig0024918:12330-12349 | None:intergenic | 40.0% |
| ! | ATGTTTGGTTCCACTTCTAG+AGG | - | tig0024918:12820-12839 | Msa1421140:CDS | 40.0% |
| ! | TGTTTGGTTCCACTTCTAGA+GGG | - | tig0024918:12821-12840 | Msa1421140:CDS | 40.0% |
| ! | AATTCTAGTCCCTCTAGAAG+TGG | + | tig0024918:12833-12852 | None:intergenic | 40.0% |
| ! | AGAGGGACTAGAATTGATTC+TGG | - | tig0024918:12838-12857 | Msa1421140:CDS | 40.0% |
| CTTCTGATACAACGTGAGTT+TGG | + | tig0024918:13098-13117 | None:intergenic | 40.0% | |
| !!! | ATGTTTTGACACGTTTGGGT+AGG | + | tig0024918:13284-13303 | None:intergenic | 40.0% |
| !!! | GTGCATGTTTTGACACGTTT+GGG | + | tig0024918:13288-13307 | None:intergenic | 40.0% |
| !!! | AGTGCATGTTTTGACACGTT+TGG | + | tig0024918:13289-13308 | None:intergenic | 40.0% |
| !!! | GTAAGCCGTCTTTTGAAGTT+TGG | - | tig0024918:13364-13383 | Msa1421140:intron | 40.0% |
| GCTACAATTACTGTTCCAGA+TGG | - | tig0024918:13481-13500 | Msa1421140:intron | 40.0% | |
| ! | ACTGCTCTCCATGAGAATTT+TGG | + | tig0024918:14026-14045 | None:intergenic | 40.0% |
| AAAATTCTCATGGAGAGCAG+TGG | - | tig0024918:14025-14044 | Msa1421140:intron | 40.0% | |
| AAATTCTCATGGAGAGCAGT+GGG | - | tig0024918:14026-14045 | Msa1421140:intron | 40.0% | |
| ACCAGCAATGCAAATAGTGA+GGG | - | tig0024918:14080-14099 | Msa1421140:intron | 40.0% | |
| CACAATAATCTCCATGTGAC+AGG | + | tig0024918:14134-14153 | None:intergenic | 40.0% | |
| ATGAATGGGTGAGGGAAGTA+TGG | + | tig0024918:12321-12340 | None:intergenic | 45.0% | |
| ACAACGTGAGTTTGGTTGTG+TGG | + | tig0024918:13090-13109 | None:intergenic | 45.0% | |
| ! | ATTTTCCAGACACGACCATC+TGG | + | tig0024918:13499-13518 | None:intergenic | 45.0% |
| AGATGGTCGTGTCTGGAAAA+TGG | - | tig0024918:13498-13517 | Msa1421140:intron | 45.0% | |
| CCTCTCACATGTTTCAACCT+TGG | + | tig0024918:13749-13768 | None:intergenic | 45.0% | |
| CCAAGGTTGAAACATGTGAG+AGG | - | tig0024918:13746-13765 | Msa1421140:intron | 45.0% | |
| ! | TTGAAACATGTGAGAGGCGT+GGG | - | tig0024918:13752-13771 | Msa1421140:intron | 45.0% |
| !! | GTTGTTTGGGTTGAGTTCCT+TGG | + | tig0024918:13830-13849 | None:intergenic | 45.0% |
| CACCAGCAATGCAAATAGTG+AGG | - | tig0024918:14079-14098 | Msa1421140:intron | 45.0% | |
| CCAGCAATGCAAATAGTGAG+GGG | - | tig0024918:14081-14100 | Msa1421140:intron | 45.0% | |
| GTGTGTTTGAGCTGATCAAG+AGG | - | tig0024918:14151-14170 | Msa1421140:CDS | 45.0% | |
| TGTTTGAGCTGATCAAGAGG+AGG | - | tig0024918:14154-14173 | Msa1421140:CDS | 45.0% | |
| ATGAATGGGTGAGGGAAGTA+TGG | + | tig0024918:12321-12340 | None:intergenic | 45.0% | |
| ACAACGTGAGTTTGGTTGTG+TGG | + | tig0024918:13090-13109 | None:intergenic | 45.0% | |
| ! | ATTTTCCAGACACGACCATC+TGG | + | tig0024918:13499-13518 | None:intergenic | 45.0% |
| AGATGGTCGTGTCTGGAAAA+TGG | - | tig0024918:13498-13517 | Msa1421140:intron | 45.0% | |
| CCTCTCACATGTTTCAACCT+TGG | + | tig0024918:13749-13768 | None:intergenic | 45.0% | |
| CCAAGGTTGAAACATGTGAG+AGG | - | tig0024918:13746-13765 | Msa1421140:intron | 45.0% | |
| ! | TTGAAACATGTGAGAGGCGT+GGG | - | tig0024918:13752-13771 | Msa1421140:intron | 45.0% |
| !! | GTTGTTTGGGTTGAGTTCCT+TGG | + | tig0024918:13830-13849 | None:intergenic | 45.0% |
| CACCAGCAATGCAAATAGTG+AGG | - | tig0024918:14079-14098 | Msa1421140:intron | 45.0% | |
| CCAGCAATGCAAATAGTGAG+GGG | - | tig0024918:14081-14100 | Msa1421140:intron | 45.0% | |
| GTGTGTTTGAGCTGATCAAG+AGG | - | tig0024918:14151-14170 | Msa1421140:CDS | 45.0% | |
| TGTTTGAGCTGATCAAGAGG+AGG | - | tig0024918:14154-14173 | Msa1421140:CDS | 45.0% | |
| ACGTGAGTTTGGTTGTGTGG+TGG | + | tig0024918:13087-13106 | None:intergenic | 50.0% | |
| GTTGAAACATGTGAGAGGCG+TGG | - | tig0024918:13751-13770 | Msa1421140:intron | 50.0% | |
| ! | ATGTGAGAGGCGTGGGAAAA+AGG | - | tig0024918:13759-13778 | Msa1421140:intron | 50.0% |
| AAGAGTAGAGGATGCTGCCA+AGG | - | tig0024918:13810-13829 | Msa1421140:intron | 50.0% | |
| CCCCTCACTATTTGCATTGC+TGG | + | tig0024918:14084-14103 | None:intergenic | 50.0% | |
| AGGGACAACAACCTGTCACA+TGG | - | tig0024918:14120-14139 | Msa1421140:intron | 50.0% | |
| ACGTGAGTTTGGTTGTGTGG+TGG | + | tig0024918:13087-13106 | None:intergenic | 50.0% | |
| GTTGAAACATGTGAGAGGCG+TGG | - | tig0024918:13751-13770 | Msa1421140:intron | 50.0% | |
| ! | ATGTGAGAGGCGTGGGAAAA+AGG | - | tig0024918:13759-13778 | Msa1421140:intron | 50.0% |
| AAGAGTAGAGGATGCTGCCA+AGG | - | tig0024918:13810-13829 | Msa1421140:intron | 50.0% | |
| CCCCTCACTATTTGCATTGC+TGG | + | tig0024918:14084-14103 | None:intergenic | 50.0% | |
| AGGGACAACAACCTGTCACA+TGG | - | tig0024918:14120-14139 | Msa1421140:intron | 50.0% | |
| ATGTCCGGACACACTTTCGC+CGG | + | tig0024918:12262-12281 | None:intergenic | 55.0% | |
| GTGTGTCCGGACATCATCAC+CGG | - | tig0024918:12268-12287 | Msa1421140:CDS | 55.0% | |
| ! | CCTTCTCCGGTGATGATGTC+CGG | + | tig0024918:12277-12296 | None:intergenic | 55.0% |
| CTGTTCCAGATGGTCGTGTC+TGG | - | tig0024918:13491-13510 | Msa1421140:intron | 55.0% | |
| GGAGAGCAGTGGGTAGTGTT+TGG | - | tig0024918:14036-14055 | Msa1421140:intron | 55.0% | |
| TGAGCTGATCAAGAGGAGGC+CGG | - | tig0024918:14158-14177 | Msa1421140:CDS | 55.0% | |
| ATGTCCGGACACACTTTCGC+CGG | + | tig0024918:12262-12281 | None:intergenic | 55.0% | |
| GTGTGTCCGGACATCATCAC+CGG | - | tig0024918:12268-12287 | Msa1421140:CDS | 55.0% | |
| ! | CCTTCTCCGGTGATGATGTC+CGG | + | tig0024918:12277-12296 | None:intergenic | 55.0% |
| CTGTTCCAGATGGTCGTGTC+TGG | - | tig0024918:13491-13510 | Msa1421140:intron | 55.0% | |
| GGAGAGCAGTGGGTAGTGTT+TGG | - | tig0024918:14036-14055 | Msa1421140:intron | 55.0% | |
| TGAGCTGATCAAGAGGAGGC+CGG | - | tig0024918:14158-14177 | Msa1421140:CDS | 55.0% | |
| CCGGACATCATCACCGGAGA+AGG | - | tig0024918:12274-12293 | Msa1421140:CDS | 60.0% | |
| CCGGACATCATCACCGGAGA+AGG | - | tig0024918:12274-12293 | Msa1421140:CDS | 60.0% | |
| ! | CTCGCCGGCGAAAGTGTGTC+CGG | - | tig0024918:12255-12274 | Msa1421140:CDS | 65.0% |
| ! | CTCGCCGGCGAAAGTGTGTC+CGG | - | tig0024918:12255-12274 | Msa1421140:CDS | 65.0% |
| CGGACACACTTTCGCCGGCG+AGG | + | tig0024918:12257-12276 | None:intergenic | 70.0% | |
| CGGACACACTTTCGCCGGCG+AGG | + | tig0024918:12257-12276 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024918 | gene | 12248 | 14227 | 12248 | ID=Msa1421140;Name=Msa1421140 |
| tig0024918 | mRNA | 12248 | 14227 | 12248 | ID=Msa1421140-mRNA-1;Parent=Msa1421140;Name=Msa1421140-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|1|1|3|0|274 |
| tig0024918 | exon | 14123 | 14227 | 14123 | ID=Msa1421140-mRNA-1:exon:1954;Parent=Msa1421140-mRNA-1 |
| tig0024918 | exon | 12587 | 13045 | 12587 | ID=Msa1421140-mRNA-1:exon:1953;Parent=Msa1421140-mRNA-1 |
| tig0024918 | exon | 12248 | 12508 | 12248 | ID=Msa1421140-mRNA-1:exon:1952;Parent=Msa1421140-mRNA-1 |
| tig0024918 | CDS | 14123 | 14227 | 14123 | ID=Msa1421140-mRNA-1:cds;Parent=Msa1421140-mRNA-1 |
| tig0024918 | CDS | 12587 | 13045 | 12587 | ID=Msa1421140-mRNA-1:cds;Parent=Msa1421140-mRNA-1 |
| tig0024918 | CDS | 12248 | 12508 | 12248 | ID=Msa1421140-mRNA-1:cds;Parent=Msa1421140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
