Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1422040 | G7KM54 | 70.370 | 135 | 19 | 1 | 54 | 188 | 36 | 149 | 1.60e-46 | 161 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1422040 | TF | MADS-M-type |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1422040 | MtrunA17_Chr4g0052061 | 54.472 | 123 | 36 | 2 | 96 | 198 | 28 | 150 | 2.75e-32 | 115 |
| Msa1422040 | MtrunA17_Chr4g0052061 | 61.290 | 62 | 21 | 1 | 3 | 64 | 100 | 158 | 1.38e-13 | 66.2 |
| Msa1422040 | MtrunA17_Chr4g0052081 | 47.863 | 117 | 35 | 4 | 98 | 188 | 30 | 146 | 2.37e-17 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 47 sgRNAs with CRISPR-Local
Find 493 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATCGAAATTCGATATATT+TGG | 0.161085 | tig0025333:+63101 | None:intergenic |
| CTCCACCTTCTTCAGCTCTT+TGG | 0.185358 | tig0025333:+69904 | None:intergenic |
| CCTTGCTGATCTTGATTTAG+AGG | 0.189952 | tig0025333:-62117 | Msa1422040:CDS |
| TTCAATGAAGCCTTCACTTT+TGG | 0.244581 | tig0025333:+69824 | None:intergenic |
| CTTGACCCTCTTGATTATAT+AGG | 0.297565 | tig0025333:+62012 | None:intergenic |
| TCTTCTAAATCAAGATCAAC+AGG | 0.378343 | tig0025333:+69851 | None:intergenic |
| TCTCATTGGTTCGGATTGTA+AGG | 0.394212 | tig0025333:-61971 | Msa1422040:CDS |
| CGAATTGAATCGCATGTCCT+TGG | 0.402217 | tig0025333:-63080 | Msa1422040:CDS |
| ATCACCTTCTGCAGCACATA+AGG | 0.415600 | tig0025333:+62996 | None:intergenic |
| ATCAAATAGGTTACCGGCAG+AGG | 0.427874 | tig0025333:+62291 | None:intergenic |
| TTGCAGCATACAAGTCTCAT+TGG | 0.446238 | tig0025333:-61985 | Msa1422040:CDS |
| ATTATATACGTTTCTTTGAA+AGG | 0.450202 | tig0025333:+69759 | None:intergenic |
| GGTGCTAGAATTAGTATTGT+TGG | 0.455289 | tig0025333:-62319 | Msa1422040:CDS |
| ATTATATAGGTTTCTTTGAA+AGG | 0.460178 | tig0025333:+62025 | None:intergenic |
| GCATACAAGTCTCATTGGTT+CGG | 0.464178 | tig0025333:-61980 | Msa1422040:CDS |
| CGGGATTTGTTTGATTGTCA+TGG | 0.487057 | tig0025333:-63056 | Msa1422040:CDS |
| ATTGTTGGATTCACCTCTGC+CGG | 0.504066 | tig0025333:-62304 | Msa1422040:intron |
| AAGAAACCTATATAATCAAG+AGG | 0.508847 | tig0025333:-62018 | Msa1422040:CDS |
| AGAGGAACTTCTAAAAGTGA+AGG | 0.528038 | tig0025333:-62099 | Msa1422040:CDS |
| AGAAGAACTTCCAAAAGTGA+AGG | 0.541786 | tig0025333:-69834 | Msa1422040:CDS |
| ATTCACATTGTCCTTCATGA+AGG | 0.552772 | tig0025333:+62231 | None:intergenic |
| TGAATCGCATGTCCTTGGAC+GGG | 0.556587 | tig0025333:-63075 | Msa1422040:CDS |
| TTGAATCGCATGTCCTTGGA+CGG | 0.564602 | tig0025333:-63076 | Msa1422040:CDS |
| CTCTAAATCAAGATCAGCAA+GGG | 0.577150 | tig0025333:+62118 | None:intergenic |
| AAACATCAACATGCTCAAGA+AGG | 0.584063 | tig0025333:-62174 | Msa1422040:CDS |
| ACCTCCTTATGTGCTGCAGA+AGG | 0.585928 | tig0025333:-63000 | Msa1422040:intron |
| CAAAGAGCTGAAGAAGGTGG+AGG | 0.586884 | tig0025333:-69903 | Msa1422040:CDS |
| AGTGAATTATCAGTTCTTTG+CGG | 0.592278 | tig0025333:-62340 | Msa1422040:CDS |
| AATCAAACAAATCCCGTCCA+AGG | 0.598244 | tig0025333:+63063 | None:intergenic |
| TTTGACCAAAGAGCTGAAGA+AGG | 0.599670 | tig0025333:-69909 | Msa1422040:CDS |
| CATCAACATGCTCAAGAAGG+TGG | 0.605156 | tig0025333:-62171 | Msa1422040:CDS |
| AAGGTGGAGGAAGTTGACAA+AGG | 0.605500 | tig0025333:-69890 | Msa1422040:CDS |
| CAACATGCTCAAGAAGGTGG+AGG | 0.612438 | tig0025333:-62168 | Msa1422040:CDS |
| ACCTTCTGCAGCACATAAGG+AGG | 0.613637 | tig0025333:+62999 | None:intergenic |
| GCTTCATTGAAAGTGCTCCA+TGG | 0.617747 | tig0025333:-62077 | Msa1422040:CDS |
| CCTCTAAATCAAGATCAGCA+AGG | 0.626143 | tig0025333:+62117 | None:intergenic |
| ACTAAGGAGTACCTTCATGA+AGG | 0.633770 | tig0025333:-62242 | Msa1422040:CDS |
| GCTTCATTGAAAGAGCTCCA+TGG | 0.633908 | tig0025333:-69812 | Msa1422040:CDS |
| AGAAACCTATATAATCAAGA+GGG | 0.637657 | tig0025333:-62017 | Msa1422040:CDS |
| CTTCTAAATCAAGATCAACA+GGG | 0.641176 | tig0025333:+69852 | None:intergenic |
| GACCAAAGAGCTGAAGAAGG+TGG | 0.645671 | tig0025333:-69906 | Msa1422040:CDS |
| TTGTTACTTCAATGTCACCA+TGG | 0.662319 | tig0025333:+62060 | None:intergenic |
| TTCTAAATCAAGATCAACAG+GGG | 0.664097 | tig0025333:+69853 | None:intergenic |
| TTGATACTTCAATGTCACCA+TGG | 0.666112 | tig0025333:+69795 | None:intergenic |
| GATAGAGCTACTACATCGAG+AGG | 0.675490 | tig0025333:-63032 | Msa1422040:CDS |
| AAGGTGGAGGAAGTTGACAA+AGG | 0.721445 | tig0025333:-62155 | Msa1422040:CDS |
| AAGGACAATGTGAATCATCG+AGG | 0.753335 | tig0025333:-62223 | Msa1422040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAAAAAATATTTAAAATA+AGG | + | tig0025333:66117-66136 | None:intergenic | 0.0% |
| !! | AAAAAAAAAAAACCAATAAT+AGG | - | tig0025333:62951-62970 | Msa1422040:intron | 10.0% |
| !! | ATAATTAACAATTAAAAAGT+TGG | - | tig0025333:63679-63698 | Msa1422040:intron | 10.0% |
| !! | TTTAGTATTAAATTTATTAG+TGG | + | tig0025333:63974-63993 | None:intergenic | 10.0% |
| !! | ATTCATAATATGAAAATAAA+TGG | - | tig0025333:64056-64075 | Msa1422040:intron | 10.0% |
| !! | TTCATAATATGAAAATAAAT+GGG | - | tig0025333:64057-64076 | Msa1422040:intron | 10.0% |
| !! | TAAGTAATAGAAAAATATTA+GGG | + | tig0025333:64382-64401 | None:intergenic | 10.0% |
| !! | TTAAGTAATAGAAAAATATT+AGG | + | tig0025333:64383-64402 | None:intergenic | 10.0% |
| !! | AGAAATAAAATTAAATAAAG+AGG | - | tig0025333:64907-64926 | Msa1422040:intron | 10.0% |
| !!! | CATTTTGATTTTATATTATT+TGG | + | tig0025333:65946-65965 | None:intergenic | 10.0% |
| !! | TTAAACTCTTAATATATTAA+CGG | - | tig0025333:66308-66327 | Msa1422040:intron | 10.0% |
| !!! | AATATTTTTAAGAGTATAAT+TGG | + | tig0025333:66696-66715 | None:intergenic | 10.0% |
| !! | ATATATATATATATATGAGA+GGG | + | tig0025333:67000-67019 | None:intergenic | 10.0% |
| !! | TATATATATATATATATGAG+AGG | + | tig0025333:67001-67020 | None:intergenic | 10.0% |
| !! | CATAATATATATTAATGAAA+AGG | + | tig0025333:67195-67214 | None:intergenic | 10.0% |
| !!! | GACAATTTAATTTTTTTTAT+CGG | - | tig0025333:67954-67973 | Msa1422040:intron | 10.0% |
| !! | ATAATAAACTTTGTAAAAAA+AGG | - | tig0025333:68100-68119 | Msa1422040:intron | 10.0% |
| !!! | ATTTTATAGGTTTTTTTGTA+AGG | + | tig0025333:62268-62287 | None:intergenic | 15.0% |
| !! | AAAAAGATTGAATGAATTTA+GGG | + | tig0025333:63149-63168 | None:intergenic | 15.0% |
| !! | TTGTACTAATTGTTTATAAT+TGG | + | tig0025333:64108-64127 | None:intergenic | 15.0% |
| !! | TAGTACCAATTATAAAAAAA+TGG | - | tig0025333:64148-64167 | Msa1422040:intron | 15.0% |
| !! | AGTACCAATTATAAAAAAAT+GGG | - | tig0025333:64149-64168 | Msa1422040:intron | 15.0% |
| !!! | AATTAAGAAAGTAGAAATTT+TGG | - | tig0025333:64252-64271 | Msa1422040:intron | 15.0% |
| !! | AGATTTCAAAAAAGATTTAA+AGG | - | tig0025333:64352-64371 | Msa1422040:intron | 15.0% |
| !! | TTTGTTCAATATTCTAAATT+CGG | - | tig0025333:66546-66565 | Msa1422040:intron | 15.0% |
| !! | TGTTTGAACATAATTATTAA+TGG | + | tig0025333:66870-66889 | None:intergenic | 15.0% |
| !! | GAAAAATGCATAATATATTA+AGG | + | tig0025333:67713-67732 | None:intergenic | 15.0% |
| !! | ATATTGAAAAATTTACTCAT+AGG | - | tig0025333:67903-67922 | Msa1422040:intron | 15.0% |
| !! | TGATGTTAAAGAATTTATTA+AGG | - | tig0025333:67931-67950 | Msa1422040:intron | 15.0% |
| !! | GATGTTAAAGAATTTATTAA+GGG | - | tig0025333:67932-67951 | Msa1422040:intron | 15.0% |
| !!! | TTTTCCATATATTATTTCTA+TGG | + | tig0025333:68620-68639 | None:intergenic | 15.0% |
| !! | GAAGAATAATTTGATATATA+AGG | + | tig0025333:68705-68724 | None:intergenic | 15.0% |
| !!! | AAAGTTTTTTGTTTTAATTC+AGG | + | tig0025333:69283-69302 | None:intergenic | 15.0% |
| !!! | AAACAAAAAACTTTTTTACA+AGG | - | tig0025333:69289-69308 | Msa1422040:intron | 15.0% |
| !! | ATTATATACGTTTCTTTGAA+AGG | + | tig0025333:62105-62124 | None:intergenic | 20.0% |
| !! | TAAACCATTATACATATGTT+TGG | - | tig0025333:62713-62732 | Msa1422040:intron | 20.0% |
| !! | TTATCCAAACATATGTATAA+TGG | + | tig0025333:62720-62739 | None:intergenic | 20.0% |
| !!! | GAACTTTAAAATCAAATCTA+AGG | - | tig0025333:63099-63118 | Msa1422040:CDS | 20.0% |
| !! | CAAAAAGATTGAATGAATTT+AGG | + | tig0025333:63150-63169 | None:intergenic | 20.0% |
| !!! | ATTCATTCAATCTTTTTGAT+TGG | - | tig0025333:63152-63171 | Msa1422040:intron | 20.0% |
| !!! | ATAGTAGATTTTTGTGTAAA+TGG | - | tig0025333:63483-63502 | Msa1422040:intron | 20.0% |
| !! | AATTCATTAATAATGACTTC+TGG | + | tig0025333:63538-63557 | None:intergenic | 20.0% |
| !!! | AAAAGGTTTTATAATGTTTG+AGG | + | tig0025333:63593-63612 | None:intergenic | 20.0% |
| !!! | ATGACCCATTTTTTTATAAT+TGG | + | tig0025333:64156-64175 | None:intergenic | 20.0% |
| !!! | AATTTTTGAAACATAACCTA+AGG | + | tig0025333:64660-64679 | None:intergenic | 20.0% |
| !! | TTAGGTTATGTTTCAAAAAT+TGG | - | tig0025333:64659-64678 | Msa1422040:intron | 20.0% |
| !! | TAGGTTATGTTTCAAAAATT+GGG | - | tig0025333:64660-64679 | Msa1422040:intron | 20.0% |
| !! | CATGTGATAGAAATAATATT+TGG | - | tig0025333:65791-65810 | Msa1422040:intron | 20.0% |
| !! | GATTAAAATTCGATATTTCA+TGG | + | tig0025333:65909-65928 | None:intergenic | 20.0% |
| !! | TATCTTAATTTACTCAACAT+AGG | - | tig0025333:66146-66165 | Msa1422040:intron | 20.0% |
| !! | ATCTTAATTTACTCAACATA+GGG | - | tig0025333:66147-66166 | Msa1422040:intron | 20.0% |
| !! | TAGTTATGATTAAAATGAAG+CGG | + | tig0025333:66215-66234 | None:intergenic | 20.0% |
| !! | AATTTGATCACAATAGAATT+AGG | - | tig0025333:66433-66452 | Msa1422040:intron | 20.0% |
| !! | ACATAATTATTAATGGTGTT+CGG | + | tig0025333:66863-66882 | None:intergenic | 20.0% |
| !! | GAAAATCAAAACAAGTAATT+AGG | + | tig0025333:66959-66978 | None:intergenic | 20.0% |
| !! | TAATATATATTATGAGTGAG+TGG | - | tig0025333:67201-67220 | Msa1422040:intron | 20.0% |
| !!! | TATGTTTGGTTTATATAATG+AGG | - | tig0025333:67813-67832 | Msa1422040:intron | 20.0% |
| !! | TCTAAATTGAAACAATTACT+TGG | - | tig0025333:67860-67879 | Msa1422040:intron | 20.0% |
| !!! | TACAATTCTAAGATTTCTTA+TGG | + | tig0025333:68566-68585 | None:intergenic | 20.0% |
| !!! | ATTGAATTTTAATCTTGACA+CGG | + | tig0025333:68649-68668 | None:intergenic | 20.0% |
| !! | AAATTATTCTTCGTGAAATA+TGG | - | tig0025333:68713-68732 | Msa1422040:intron | 20.0% |
| !! | TTCATTGATAAGTTTAAAGA+TGG | - | tig0025333:68934-68953 | Msa1422040:intron | 20.0% |
| !! | AAACTACATATTTAATCACA+AGG | + | tig0025333:69095-69114 | None:intergenic | 20.0% |
| !!! | GAGTCTTTTTTTCTATTATT+TGG | + | tig0025333:69125-69144 | None:intergenic | 20.0% |
| !!! | TTTTATTCACTTGAAAACTA+AGG | + | tig0025333:69324-69343 | None:intergenic | 20.0% |
| !!! | AGTTTTCAAGTGAATAAAAT+TGG | - | tig0025333:69325-69344 | Msa1422040:intron | 20.0% |
| !! | CAAATAAAAGAACAAACAAT+AGG | + | tig0025333:69352-69371 | None:intergenic | 20.0% |
| !!! | GTTTGTTCTTTTATTTGAAA+TGG | - | tig0025333:69355-69374 | Msa1422040:intron | 20.0% |
| !! | ATTATATAGGTTTCTTTGAA+AGG | + | tig0025333:69839-69858 | None:intergenic | 20.0% |
| ! | AAGAAACGTATATAATCAAG+AGG | - | tig0025333:62109-62128 | Msa1422040:CDS | 25.0% |
| ! | AGAAACGTATATAATCAAGA+GGG | - | tig0025333:62110-62129 | Msa1422040:CDS | 25.0% |
| ! | CATGAGAAAAATACAATGTT+CGG | - | tig0025333:62179-62198 | Msa1422040:CDS | 25.0% |
| !! | TCACACACATAAGATTTTAT+AGG | + | tig0025333:62281-62300 | None:intergenic | 25.0% |
| !!! | TAAAAGAACTTCTAAAGTGA+AGG | - | tig0025333:62373-62392 | Msa1422040:intron | 25.0% |
| ! | ATTATATAGGTTTCTTTGCA+AGG | + | tig0025333:62450-62469 | None:intergenic | 25.0% |
| ! | AAGAAACCTATATAATCAAG+AGG | - | tig0025333:62454-62473 | Msa1422040:intron | 25.0% |
| ! | AGAAACCTATATAATCAAGA+GGG | - | tig0025333:62455-62474 | Msa1422040:intron | 25.0% |
| ! | TTTATCAGTGTGTTTGTATT+TGG | + | tig0025333:62697-62716 | None:intergenic | 25.0% |
| ! | ATCACATTAATATGAAAGCT+TGG | + | tig0025333:62797-62816 | None:intergenic | 25.0% |
| ! | GAATACAACAATCTGATAAA+AGG | + | tig0025333:63015-63034 | None:intergenic | 25.0% |
| !!! | CTTTAAAATCAAATCTAAGG+TGG | - | tig0025333:63102-63121 | Msa1422040:CDS | 25.0% |
| !!! | CATTGACTGATTTTTCTATA+AGG | - | tig0025333:63314-63333 | Msa1422040:intron | 25.0% |
| !!! | GCTATATTTGAGATTTTAGA+TGG | + | tig0025333:63374-63393 | None:intergenic | 25.0% |
| ! | GATGAGTTATAGAACTAAAA+TGG | + | tig0025333:63735-63754 | None:intergenic | 25.0% |
| ! | CCACAGATATAAATATAATG+AGG | + | tig0025333:63768-63787 | None:intergenic | 25.0% |
| ! | CCTCATTATATTTATATCTG+TGG | - | tig0025333:63765-63784 | Msa1422040:intron | 25.0% |
| !!! | GAAATTTTGAGTAATGTTCA+AGG | + | tig0025333:64029-64048 | None:intergenic | 25.0% |
| !!! | AAAGTAGAAATTTTGGTAGT+GGG | - | tig0025333:64259-64278 | Msa1422040:intron | 25.0% |
| ! | ATTAAAAAAAAGTCCAAGTG+TGG | + | tig0025333:64467-64486 | None:intergenic | 25.0% |
| ! | TGTTTGTACAACTTTGTTAA+CGG | + | tig0025333:64592-64611 | None:intergenic | 25.0% |
| ! | GCAAAAAAAAAAAGATCATG+TGG | + | tig0025333:64866-64885 | None:intergenic | 25.0% |
| ! | TAAAAAAATCAGAAGATCTG+AGG | - | tig0025333:65753-65772 | Msa1422040:intron | 25.0% |
| ! | GGAGAATAATTTGATAGAAA+AGG | + | tig0025333:65888-65907 | None:intergenic | 25.0% |
| ! | TGGTAGATAGTGATATTTAT+AGG | - | tig0025333:66072-66091 | Msa1422040:intron | 25.0% |
| ! | AATATACACTATGAGTGTAA+TGG | - | tig0025333:66179-66198 | Msa1422040:intron | 25.0% |
| ! | TCATAACTATCTTTAACGTT+AGG | - | tig0025333:66226-66245 | Msa1422040:intron | 25.0% |
| ! | AATATTCTAAATTCGGCAAT+AGG | - | tig0025333:66553-66572 | Msa1422040:intron | 25.0% |
| !! | GTAAAAGGAATACATGATTT+TGG | - | tig0025333:66655-66674 | Msa1422040:intron | 25.0% |
| ! | ATTATGTTCAAACAACAGTT+TGG | - | tig0025333:66876-66895 | Msa1422040:intron | 25.0% |
| !!! | TTACTTGTTTTGATTTTCTG+AGG | - | tig0025333:66961-66980 | Msa1422040:intron | 25.0% |
| !!! | TACTTGTTTTGATTTTCTGA+GGG | - | tig0025333:66962-66981 | Msa1422040:intron | 25.0% |
| ! | GTAACATACACAAGAAAAAA+GGG | + | tig0025333:67070-67089 | None:intergenic | 25.0% |
| ! | TGTAACATACACAAGAAAAA+AGG | + | tig0025333:67071-67090 | None:intergenic | 25.0% |
| ! | AGATAAATATGAGATAGAAG+AGG | + | tig0025333:67610-67629 | None:intergenic | 25.0% |
| ! | TTAAGATGAAGGGAAAATAT+AGG | + | tig0025333:67645-67664 | None:intergenic | 25.0% |
| ! | ATGCATAATATATTAAGGTC+CGG | + | tig0025333:67708-67727 | None:intergenic | 25.0% |
| !! | ACCATTGTAAAATTAAGTTG+GGG | + | tig0025333:67770-67789 | None:intergenic | 25.0% |
| ! | GACCATTGTAAAATTAAGTT+GGG | + | tig0025333:67771-67790 | None:intergenic | 25.0% |
| !! | CAACTTAATTTTACAATGGT+CGG | - | tig0025333:67770-67789 | Msa1422040:intron | 25.0% |
| !!! | TATTTTTACGAAAAATCGAG+AGG | - | tig0025333:68135-68154 | Msa1422040:intron | 25.0% |
| !!! | TTTTTCTAAAAGAGCTTTGA+TGG | + | tig0025333:68255-68274 | None:intergenic | 25.0% |
| ! | AAACTTACCTGTAAAACAAT+GGG | + | tig0025333:68495-68514 | None:intergenic | 25.0% |
| ! | AAAACTTACCTGTAAAACAA+TGG | + | tig0025333:68496-68515 | None:intergenic | 25.0% |
| !!! | CCATATATTATTTCTATGGT+AGG | + | tig0025333:68616-68635 | None:intergenic | 25.0% |
| ! | CCTACCATAGAAATAATATA+TGG | - | tig0025333:68613-68632 | Msa1422040:intron | 25.0% |
| ! | CAAAAACATTAGACACATTA+TGG | + | tig0025333:68909-68928 | None:intergenic | 25.0% |
| ! | GATGATGCAATAATAGAAAA+AGG | - | tig0025333:69031-69050 | Msa1422040:intron | 25.0% |
| !!! | GTTCTTTTATTTGAAATGGA+TGG | - | tig0025333:69359-69378 | Msa1422040:intron | 25.0% |
| ! | ATATGATTCTATGATATTGC+AGG | - | tig0025333:69405-69424 | Msa1422040:intron | 25.0% |
| ! | TTGAAGAGACAAAATCAAAT+AGG | + | tig0025333:69586-69605 | None:intergenic | 25.0% |
| ! | AAGAAACCTATATAATCAAG+AGG | - | tig0025333:62454-62473 | Msa1422040:intron | 25.0% |
| ! | AGAAACCTATATAATCAAGA+GGG | - | tig0025333:62455-62474 | Msa1422040:intron | 25.0% |
| TTCTAAATCAAGATCAACAG+GGG | + | tig0025333:62011-62030 | None:intergenic | 30.0% | |
| CTTCTAAATCAAGATCAACA+GGG | + | tig0025333:62012-62031 | None:intergenic | 30.0% | |
| TCTTCTAAATCAAGATCAAC+AGG | + | tig0025333:62013-62032 | None:intergenic | 30.0% | |
| !! | TTGTATTTGGCTTGTGAAAA+AGG | + | tig0025333:62684-62703 | None:intergenic | 30.0% |
| AGCTTTGCTCTAACTTTAAA+TGG | - | tig0025333:62851-62870 | Msa1422040:intron | 30.0% | |
| GCTTTGCTCTAACTTTAAAT+GGG | - | tig0025333:62852-62871 | Msa1422040:intron | 30.0% | |
| CTTTGCTCTAACTTTAAATG+GGG | - | tig0025333:62853-62872 | Msa1422040:intron | 30.0% | |
| AACAATCTGATAAAAGGTCA+TGG | + | tig0025333:63009-63028 | None:intergenic | 30.0% | |
| GATAGAATGACATGATAAGA+AGG | + | tig0025333:63037-63056 | None:intergenic | 30.0% | |
| ! | AAAATCAAATCTAAGGTGGT+AGG | - | tig0025333:63106-63125 | Msa1422040:CDS | 30.0% |
| ACATAGTAAACAAGACAGAA+TGG | - | tig0025333:63188-63207 | Msa1422040:intron | 30.0% | |
| GTGTTGAAAAACATAGTACA+GGG | - | tig0025333:63210-63229 | Msa1422040:intron | 30.0% | |
| AAAAGATCAGTGAATCAAAG+TGG | - | tig0025333:63233-63252 | Msa1422040:intron | 30.0% | |
| ! | TTCTATTTTCAATGACAGTC+TGG | + | tig0025333:63264-63283 | None:intergenic | 30.0% |
| GATAACTGATGCAAATGTTA+TGG | - | tig0025333:63344-63363 | Msa1422040:intron | 30.0% | |
| CATTAATAATGACTTCTGGT+TGG | + | tig0025333:63534-63553 | None:intergenic | 30.0% | |
| TCAAATGAAAGGGAAACAAA+AGG | + | tig0025333:63610-63629 | None:intergenic | 30.0% | |
| !! | TCTTGGATTGTGTTGATAAT+TGG | - | tig0025333:63651-63670 | Msa1422040:intron | 30.0% |
| !! | CTTGGATTGTGTTGATAATT+GGG | - | tig0025333:63652-63671 | Msa1422040:intron | 30.0% |
| GTTATAGAACTAAAATGGTC+AGG | + | tig0025333:63730-63749 | None:intergenic | 30.0% | |
| TATTGTATTGTTGTCAACTG+AGG | + | tig0025333:63839-63858 | None:intergenic | 30.0% | |
| AGTTGACAACAATACAATAG+AGG | - | tig0025333:63840-63859 | Msa1422040:intron | 30.0% | |
| TTATCTCTATGTTGTCAATG+CGG | - | tig0025333:63877-63896 | Msa1422040:intron | 30.0% | |
| ! | ATAGTGATTGGTTAACTTAG+AGG | - | tig0025333:64178-64197 | Msa1422040:intron | 30.0% |
| ! | TAGTGATTGGTTAACTTAGA+GGG | - | tig0025333:64179-64198 | Msa1422040:intron | 30.0% |
| !! | GAAAGTAGAAATTTTGGTAG+TGG | - | tig0025333:64258-64277 | Msa1422040:intron | 30.0% |
| !!! | AAGTAGAAATTTTGGTAGTG+GGG | - | tig0025333:64260-64279 | Msa1422040:intron | 30.0% |
| ! | ACTCAAGTGCTATTCTTAAT+CGG | - | tig0025333:64315-64334 | Msa1422040:intron | 30.0% |
| !!! | ATTTTACTCTAAGGTGGTTT+TGG | + | tig0025333:64551-64570 | None:intergenic | 30.0% |
| GTGTATCTTAATGCTTATCA+CGG | + | tig0025333:64728-64747 | None:intergenic | 30.0% | |
| TAGTCTCAAAAACTGGAAAT+TGG | + | tig0025333:64750-64769 | None:intergenic | 30.0% | |
| ATAGATCTAGTCTCAAAAAC+TGG | + | tig0025333:64757-64776 | None:intergenic | 30.0% | |
| ACTCTTCTTGAAGAAAAATG+TGG | - | tig0025333:64778-64797 | Msa1422040:intron | 30.0% | |
| ! | AAACCACTCAATTTTACATG+TGG | - | tig0025333:64829-64848 | Msa1422040:intron | 30.0% |
| ! | AACCACTCAATTTTACATGT+GGG | - | tig0025333:64830-64849 | Msa1422040:intron | 30.0% |
| ! | AGTGAATGTTTAGAGTATCA+AGG | - | tig0025333:65106-65125 | Msa1422040:intron | 30.0% |
| ! | AATGTTTAGAGTATCAAGGT+AGG | - | tig0025333:65110-65129 | Msa1422040:intron | 30.0% |
| !! | AGTTTTCCAGATTTAAGATC+TGG | + | tig0025333:65413-65432 | None:intergenic | 30.0% |
| GATTAACAACAACTAAGATC+TGG | - | tig0025333:65441-65460 | Msa1422040:intron | 30.0% | |
| !!! | GTTGGTTTTGTTTTGTTTTC+AGG | + | tig0025333:65492-65511 | None:intergenic | 30.0% |
| GAAAAAATCAGATCTTGTGT+GGG | + | tig0025333:65719-65738 | None:intergenic | 30.0% | |
| CAAAATTTATGACAAACGAG+TGG | - | tig0025333:65853-65872 | Msa1422040:intron | 30.0% | |
| TACCACATAAAAACTCAAAG+AGG | + | tig0025333:66057-66076 | None:intergenic | 30.0% | |
| TACGTGATTGTGTTTATTGA+CGG | - | tig0025333:66253-66272 | Msa1422040:intron | 30.0% | |
| TTAATATATTAACGGCCAAC+TGG | - | tig0025333:66316-66335 | Msa1422040:intron | 30.0% | |
| CAATAGAATTAGGCATGAAA+AGG | - | tig0025333:66443-66462 | Msa1422040:intron | 30.0% | |
| TTTCAATAAAGACGTAGGTT+CGG | + | tig0025333:66611-66630 | None:intergenic | 30.0% | |
| ACTTCTTTCAATAAAGACGT+AGG | + | tig0025333:66616-66635 | None:intergenic | 30.0% | |
| ! | GCAAACATTTTACGTGTAAA+AGG | - | tig0025333:66640-66659 | Msa1422040:intron | 30.0% |
| AATTATTAATGGTGTTCGGT+CGG | + | tig0025333:66859-66878 | None:intergenic | 30.0% | |
| TTAAACAAAGATTCCCTAAG+AGG | + | tig0025333:66920-66939 | None:intergenic | 30.0% | |
| ! | TCTTAGGGAATCTTTGTTTA+AGG | - | tig0025333:66919-66938 | Msa1422040:intron | 30.0% |
| !!! | TTTTGATTTTCTGAGGGTTT+TGG | - | tig0025333:66968-66987 | Msa1422040:intron | 30.0% |
| ! | AAATTTTAGACTTCCCAACT+AGG | + | tig0025333:67256-67275 | None:intergenic | 30.0% |
| GGCAATGAAAAAAAAAGTTG+GGG | + | tig0025333:67672-67691 | None:intergenic | 30.0% | |
| CGGCAATGAAAAAAAAAGTT+GGG | + | tig0025333:67673-67692 | None:intergenic | 30.0% | |
| !!! | CCAACTTTTTTTTTCATTGC+CGG | - | tig0025333:67671-67690 | Msa1422040:intron | 30.0% |
| !!! | CAACTTTTTTTTTCATTGCC+GGG | - | tig0025333:67672-67691 | Msa1422040:intron | 30.0% |
| !!! | AACTTTTTTTTTCATTGCCG+GGG | - | tig0025333:67673-67692 | Msa1422040:intron | 30.0% |
| TGCATAATATATTAAGGTCC+GGG | + | tig0025333:67707-67726 | None:intergenic | 30.0% | |
| ! | TCCCCAACTTAATTTTACAA+TGG | - | tig0025333:67766-67785 | Msa1422040:intron | 30.0% |
| CGACCATTGTAAAATTAAGT+TGG | + | tig0025333:67772-67791 | None:intergenic | 30.0% | |
| CCTTAAAAAGAGTTCAATGT+GGG | + | tig0025333:68162-68181 | None:intergenic | 30.0% | |
| TCCTTAAAAAGAGTTCAATG+TGG | + | tig0025333:68163-68182 | None:intergenic | 30.0% | |
| ! | GTTTTATGAAACTATGGTTG+GGG | + | tig0025333:68209-68228 | None:intergenic | 30.0% |
| !! | GGTTTTATGAAACTATGGTT+GGG | + | tig0025333:68210-68229 | None:intergenic | 30.0% |
| !! | AGGTTTTATGAAACTATGGT+TGG | + | tig0025333:68211-68230 | None:intergenic | 30.0% |
| !! | AAGGAGGTTTTATGAAACTA+TGG | + | tig0025333:68215-68234 | None:intergenic | 30.0% |
| TAATATATGAAGCACAACCA+AGG | + | tig0025333:68337-68356 | None:intergenic | 30.0% | |
| TTGGTTGTGCTTCATATATT+AGG | - | tig0025333:68336-68355 | Msa1422040:intron | 30.0% | |
| !! | AGTTAAGATCCACCATTTTT+AGG | - | tig0025333:68411-68430 | Msa1422040:intron | 30.0% |
| TCTTCAAAACCTAAAAATGG+TGG | + | tig0025333:68423-68442 | None:intergenic | 30.0% | |
| TGGTCTTCAAAACCTAAAAA+TGG | + | tig0025333:68426-68445 | None:intergenic | 30.0% | |
| !! | TTTTTAGCCCATTGTTTTAC+AGG | - | tig0025333:68485-68504 | Msa1422040:intron | 30.0% |
| !!! | AAGTTTTTTTTAGCCTTGCA+TGG | - | tig0025333:68509-68528 | Msa1422040:intron | 30.0% |
| CGATCGAAATTCGATATATT+TGG | + | tig0025333:68763-68782 | None:intergenic | 30.0% | |
| ACACATTATGGTAGCAATAA+AGG | + | tig0025333:68897-68916 | None:intergenic | 30.0% | |
| TATTGCATCATCATTGCTAA+TGG | + | tig0025333:69023-69042 | None:intergenic | 30.0% | |
| !!! | TGATGCATTTTTGTTGTTTC+TGG | + | tig0025333:69174-69193 | None:intergenic | 30.0% |
| !!! | AACTTTTTTACAAGGTAAGC+AGG | - | tig0025333:69297-69316 | Msa1422040:intron | 30.0% |
| ! | TTTATTTGAAATGGATGGCT+AGG | - | tig0025333:69364-69383 | Msa1422040:intron | 30.0% |
| ! | TTATTTGAAATGGATGGCTA+GGG | - | tig0025333:69365-69384 | Msa1422040:intron | 30.0% |
| AATAAACTTATCGTCCTTAG+CGG | + | tig0025333:69462-69481 | None:intergenic | 30.0% | |
| ATTCACTTGCTTTCTTAACA+AGG | + | tig0025333:69508-69527 | None:intergenic | 30.0% | |
| AGTGAATTATCAGTTCTTTG+CGG | - | tig0025333:69521-69540 | Msa1422040:intron | 30.0% | |
| GACAAAATCAAATAGGTTAC+CGG | + | tig0025333:69579-69598 | None:intergenic | 30.0% | |
| !!! | TTGATGTTTTGATTTCGAGA+AGG | + | tig0025333:69676-69695 | None:intergenic | 30.0% |
| AGAAGAACTTCCAAAAGTGA+AGG | - | tig0025333:62027-62046 | Msa1422040:CDS | 35.0% | |
| ! | TTCAATGAAGCCTTCACTTT+TGG | + | tig0025333:62040-62059 | None:intergenic | 35.0% |
| TTGATACTTCAATGTCACCA+TGG | + | tig0025333:62069-62088 | None:intergenic | 35.0% | |
| TTAAATCAAGATCAGCAGCA+GGG | + | tig0025333:62356-62375 | None:intergenic | 35.0% | |
| TTTAAATCAAGATCAGCAGC+AGG | + | tig0025333:62357-62376 | None:intergenic | 35.0% | |
| CTTGACCCTCTTGATTATAT+AGG | + | tig0025333:62463-62482 | None:intergenic | 35.0% | |
| TTGCAGCATATAAGTGTCAT+TGG | - | tig0025333:62487-62506 | Msa1422040:intron | 35.0% | |
| ! | GCATATAAGTGTCATTGGTT+TGG | - | tig0025333:62492-62511 | Msa1422040:intron | 35.0% |
| AGTTAGAGCAAAGCTCTATA+TGG | + | tig0025333:62846-62865 | None:intergenic | 35.0% | |
| AACCAATAATAGGAACCAGT+AGG | - | tig0025333:62961-62980 | Msa1422040:intron | 35.0% | |
| ! | TTTAAAGTTCGATGTGTCAC+TGG | + | tig0025333:63089-63108 | None:intergenic | 35.0% |
| ! | GGTGTTGAAAAACATAGTAC+AGG | - | tig0025333:63209-63228 | Msa1422040:intron | 35.0% |
| TATCATGACCTAAACATGAC+TGG | - | tig0025333:63562-63581 | Msa1422040:intron | 35.0% | |
| GGATTGTGCATCAAATGAAA+GGG | + | tig0025333:63620-63639 | None:intergenic | 35.0% | |
| AGGATTGTGCATCAAATGAA+AGG | + | tig0025333:63621-63640 | None:intergenic | 35.0% | |
| AATGGGTCATACATAGTGAT+TGG | - | tig0025333:64166-64185 | Msa1422040:intron | 35.0% | |
| GTGAGAAACAACGACTATTA+AGG | + | tig0025333:64503-64522 | None:intergenic | 35.0% | |
| !!! | GGTTTTGGATGATTGTGATT+GGG | + | tig0025333:64536-64555 | None:intergenic | 35.0% |
| !!! | TGGTTTTGGATGATTGTGAT+TGG | + | tig0025333:64537-64556 | None:intergenic | 35.0% |
| !! | TCGATGATTTTACTCTAAGG+TGG | + | tig0025333:64557-64576 | None:intergenic | 35.0% |
| ATCCCACATGTAAAATTGAG+TGG | + | tig0025333:64835-64854 | None:intergenic | 35.0% | |
| ! | ATAAAGAGGAAGTACAAGAC+TGG | - | tig0025333:64921-64940 | Msa1422040:intron | 35.0% |
| ! | TAAAGAGGAAGTACAAGACT+GGG | - | tig0025333:64922-64941 | Msa1422040:intron | 35.0% |
| ATTTGATGTATCACCCGTTA+GGG | + | tig0025333:64982-65001 | None:intergenic | 35.0% | |
| ACATCAAATCAGAACACAAG+TGG | - | tig0025333:64993-65012 | Msa1422040:intron | 35.0% | |
| CCATTTATCTGGACTTTGAT+CGG | + | tig0025333:65229-65248 | None:intergenic | 35.0% | |
| TATGTTCTGATTCATCTGTG+TGG | + | tig0025333:65385-65404 | None:intergenic | 35.0% | |
| CACAGATGAATCAGAACATA+AGG | - | tig0025333:65385-65404 | Msa1422040:intron | 35.0% | |
| AAGGAACCAGATCTTAAATC+TGG | - | tig0025333:65404-65423 | Msa1422040:intron | 35.0% | |
| !!! | CTGTTTTTGTGTTGTTCTGT+TGG | + | tig0025333:65510-65529 | None:intergenic | 35.0% |
| CAACAGAACAACACAAAAAC+AGG | - | tig0025333:65508-65527 | Msa1422040:intron | 35.0% | |
| !!! | TTGTGCCATTTTTGTGTTTC+CGG | + | tig0025333:65536-65555 | None:intergenic | 35.0% |
| TTTGTGTTGTGTTGTGTTTG+TGG | + | tig0025333:65577-65596 | None:intergenic | 35.0% | |
| CGAAAAAATCAGATCTTGTG+TGG | + | tig0025333:65720-65739 | None:intergenic | 35.0% | |
| AGAAGATCTGAGGATCTAAA+TGG | - | tig0025333:65763-65782 | Msa1422040:intron | 35.0% | |
| TAAAAACTCAAAGAGGCAGT+AGG | + | tig0025333:66050-66069 | None:intergenic | 35.0% | |
| !! | TGCCTCTTTGAGTTTTTATG+TGG | - | tig0025333:66052-66071 | Msa1422040:intron | 35.0% |
| ! | ACGGTGTGAACTTTTTACAT+TGG | - | tig0025333:66272-66291 | Msa1422040:intron | 35.0% |
| TTTATAGTTCCAATGCCAGT+TGG | + | tig0025333:66334-66353 | None:intergenic | 35.0% | |
| ATTCTAAATTCGGCAATAGG+AGG | - | tig0025333:66556-66575 | Msa1422040:intron | 35.0% | |
| TTCAATAAAGACGTAGGTTC+GGG | + | tig0025333:66610-66629 | None:intergenic | 35.0% | |
| ATTATTAATGGTGTTCGGTC+GGG | + | tig0025333:66858-66877 | None:intergenic | 35.0% | |
| ATGTTCAAACAACAGTTTGG+TGG | - | tig0025333:66879-66898 | Msa1422040:intron | 35.0% | |
| TGTTCAAACAACAGTTTGGT+GGG | - | tig0025333:66880-66899 | Msa1422040:intron | 35.0% | |
| AAAGATTCCCTAAGAGGAAT+GGG | + | tig0025333:66914-66933 | None:intergenic | 35.0% | |
| TTTATCCAAAAAGAGAGCCA+TGG | - | tig0025333:67300-67319 | Msa1422040:intron | 35.0% | |
| TTGGGGAATGTTAAGATGAA+GGG | + | tig0025333:67655-67674 | None:intergenic | 35.0% | |
| CCGGCAATGAAAAAAAAAGT+TGG | + | tig0025333:67674-67693 | None:intergenic | 35.0% | |
| CATAATATATTAAGGTCCGG+GGG | + | tig0025333:67705-67724 | None:intergenic | 35.0% | |
| GCATAATATATTAAGGTCCG+GGG | + | tig0025333:67706-67725 | None:intergenic | 35.0% | |
| ! | TGCATTTTTCTTACCAACTG+AGG | - | tig0025333:67723-67742 | Msa1422040:intron | 35.0% |
| GGATCACATTTGAGTGTTAA+TGG | + | tig0025333:68005-68024 | None:intergenic | 35.0% | |
| ACTCAAATGTGATCCATAGT+CGG | - | tig0025333:68010-68029 | Msa1422040:intron | 35.0% | |
| ! | CCCACATTGAACTCTTTTTA+AGG | - | tig0025333:68159-68178 | Msa1422040:intron | 35.0% |
| ! | TCGATGATTTAACTCTAAGG+AGG | + | tig0025333:68231-68250 | None:intergenic | 35.0% |
| ACAAAAGGGAGAATAACGAT+TGG | + | tig0025333:68302-68321 | None:intergenic | 35.0% | |
| !! | GGTTTTGATCTCGAACAAAA+GGG | + | tig0025333:68316-68335 | None:intergenic | 35.0% |
| !! | AGGTTTTGATCTCGAACAAA+AGG | + | tig0025333:68317-68336 | None:intergenic | 35.0% |
| TTTGTTCGAGATCAAAACCT+TGG | - | tig0025333:68317-68336 | Msa1422040:intron | 35.0% | |
| ! | ACCAGATTTTAAACGCTTCT+TGG | - | tig0025333:68442-68461 | Msa1422040:intron | 35.0% |
| !! | TCCAAGAAGCGTTTAAAATC+TGG | + | tig0025333:68446-68465 | None:intergenic | 35.0% |
| CATGTTAAAATGACCATGCA+AGG | + | tig0025333:68525-68544 | None:intergenic | 35.0% | |
| TTATAACCAACGAGTGATGA+TGG | - | tig0025333:68676-68695 | Msa1422040:intron | 35.0% | |
| !! | TGGTACTTCGTTGATTTGAT+TGG | + | tig0025333:68743-68762 | None:intergenic | 35.0% |
| GATTTATTGTGATCGATGCA+AGG | + | tig0025333:69215-69234 | None:intergenic | 35.0% | |
| TATTGCAGGAATTGATTGCA+AGG | - | tig0025333:69419-69438 | Msa1422040:intron | 35.0% | |
| ATTGCAGGAATTGATTGCAA+GGG | - | tig0025333:69420-69439 | Msa1422040:intron | 35.0% | |
| GGTGCTAGAATTAGTATTGT+TGG | - | tig0025333:69542-69561 | Msa1422040:intron | 35.0% | |
| !!! | CAACTTTTAAGTTGCGACTA+AGG | - | tig0025333:69603-69622 | Msa1422040:intron | 35.0% |
| ATTCACATTGTCCTTCATGA+AGG | + | tig0025333:69633-69652 | None:intergenic | 35.0% | |
| AAACATCAACATGCTCAAGA+AGG | - | tig0025333:69687-69706 | Msa1422040:intron | 35.0% | |
| CTCTAAATCAAGATCAGCAA+GGG | + | tig0025333:69746-69765 | None:intergenic | 35.0% | |
| ! | AGAGGAACTTCTAAAAGTGA+AGG | - | tig0025333:69762-69781 | Msa1422040:intron | 35.0% |
| ! | TTGTTACTTCAATGTCACCA+TGG | + | tig0025333:69804-69823 | None:intergenic | 35.0% |
| CTTGACCCTCTTGATTATAT+AGG | + | tig0025333:62463-62482 | None:intergenic | 35.0% | |
| TTTGACCAAAGAGCTGAAGA+AGG | - | tig0025333:61952-61971 | Msa1422040:CDS | 40.0% | |
| TTGCAGCATACAAGTCTCAT+TGG | - | tig0025333:62142-62161 | Msa1422040:CDS | 40.0% | |
| ! | GCATACAAGTCTCATTGGTT+CGG | - | tig0025333:62147-62166 | Msa1422040:CDS | 40.0% |
| TCATTGAAAGATCAGCTCCA+TGG | - | tig0025333:62212-62231 | Msa1422040:CDS | 40.0% | |
| ATCTTATGTGTGTGACCGAA+TGG | - | tig0025333:62286-62305 | Msa1422040:intron | 40.0% | |
| AAGGTCGAGGAAATTGACAA+AGG | - | tig0025333:62315-62334 | Msa1422040:CDS | 40.0% | |
| TAAATCAAGATCAGCAGCAG+GGG | + | tig0025333:62355-62374 | None:intergenic | 40.0% | |
| GCTTCATTGAAAGAGCTAGA+TGG | - | tig0025333:62395-62414 | Msa1422040:intron | 40.0% | |
| ! | TGTGATTTTCCACAGCAGTT+CGG | - | tig0025333:62811-62830 | Msa1422040:intron | 40.0% |
| !! | ATTGGACCTTTCGGATTAGT+CGG | - | tig0025333:62895-62914 | Msa1422040:intron | 40.0% |
| AAAACTCGGTATCTGACCTA+AGG | + | tig0025333:62922-62941 | None:intergenic | 40.0% | |
| !! | CTCCTACTGGTTCCTATTAT+TGG | + | tig0025333:62966-62985 | None:intergenic | 40.0% |
| TACTATTGATGCACGAGAGA+AGG | + | tig0025333:63469-63488 | None:intergenic | 40.0% | |
| ! | TTTTGTGTAAATGGTCCTGC+AGG | - | tig0025333:63492-63511 | Msa1422040:intron | 40.0% |
| ! | AGGTGTTACCAGTCATGTTT+AGG | + | tig0025333:63573-63592 | None:intergenic | 40.0% |
| CAATCCTGCTCAAAAAGTCT+TGG | - | tig0025333:63634-63653 | Msa1422040:intron | 40.0% | |
| !! | CAATCCAAGACTTTTTGAGC+AGG | + | tig0025333:63641-63660 | None:intergenic | 40.0% |
| ATGTTGTCAATGCGGAAATG+CGG | - | tig0025333:63885-63904 | Msa1422040:intron | 40.0% | |
| ATGATTGTGATTGGGCAAAG+GGG | + | tig0025333:64528-64547 | None:intergenic | 40.0% | |
| GATGATTGTGATTGGGCAAA+GGG | + | tig0025333:64529-64548 | None:intergenic | 40.0% | |
| ! | GGCTCGATGATTTTACTCTA+AGG | + | tig0025333:64560-64579 | None:intergenic | 40.0% |
| CTTTGTTAACGGTACTCAGA+TGG | + | tig0025333:64581-64600 | None:intergenic | 40.0% | |
| GTTGTTCGAGATCAAACCTT+AGG | - | tig0025333:64641-64660 | Msa1422040:intron | 40.0% | |
| TCACGGACAAATTGCGTTAA+GGG | + | tig0025333:64711-64730 | None:intergenic | 40.0% | |
| ATCACGGACAAATTGCGTTA+AGG | + | tig0025333:64712-64731 | None:intergenic | 40.0% | |
| ! | AAAGAGGAAGTACAAGACTG+GGG | - | tig0025333:64923-64942 | Msa1422040:intron | 40.0% |
| GTTTGTGTCAGTGGTTATCT+GGG | + | tig0025333:64960-64979 | None:intergenic | 40.0% | |
| GATTTGATGTATCACCCGTT+AGG | + | tig0025333:64983-65002 | None:intergenic | 40.0% | |
| TGGACTTTGATCGGATTGAT+TGG | + | tig0025333:65220-65239 | None:intergenic | 40.0% | |
| CCGATCAAAGTCCAGATAAA+TGG | - | tig0025333:65226-65245 | Msa1422040:intron | 40.0% | |
| CCAGATAAATGGACAAACGT+CGG | - | tig0025333:65237-65256 | Msa1422040:intron | 40.0% | |
| AGATGTTGCTCGAAAGAGTT+TGG | + | tig0025333:65355-65374 | None:intergenic | 40.0% | |
| AAACTCTTTCGAGCAACATC+TGG | - | tig0025333:65354-65373 | Msa1422040:intron | 40.0% | |
| !! | TGTTTTCAGGAAGATGAAGC+TGG | + | tig0025333:65479-65498 | None:intergenic | 40.0% |
| AACAACACAAAAACAGGACC+CGG | - | tig0025333:65514-65533 | Msa1422040:intron | 40.0% | |
| !!! | TGTGCCATTTTTGTGTTTCC+GGG | + | tig0025333:65535-65554 | None:intergenic | 40.0% |
| ACAACACAACACAAAACAGC+CGG | - | tig0025333:65582-65601 | Msa1422040:intron | 40.0% | |
| !!! | GAGCTTTTTTGTTGTTTCGC+CGG | + | tig0025333:65604-65623 | None:intergenic | 40.0% |
| AATCAGATCTTGTGTGGGTT+AGG | + | tig0025333:65714-65733 | None:intergenic | 40.0% | |
| ATAGGCCTTTACAGTTAGCA+AGG | - | tig0025333:66090-66109 | Msa1422040:intron | 40.0% | |
| AAGGACCTTGCTAACTGTAA+AGG | + | tig0025333:66098-66117 | None:intergenic | 40.0% | |
| AGGTTTCTCTGTCAAAGAAG+AGG | + | tig0025333:66502-66521 | None:intergenic | 40.0% | |
| ACAGAGAAACCTCACTTTGA+TGG | - | tig0025333:66510-66529 | Msa1422040:intron | 40.0% | |
| CAGAGAAACCTCACTTTGAT+GGG | - | tig0025333:66511-66530 | Msa1422040:intron | 40.0% | |
| AGAGAAACCTCACTTTGATG+GGG | - | tig0025333:66512-66531 | Msa1422040:intron | 40.0% | |
| TAAATTCGGCAATAGGAGGA+GGG | - | tig0025333:66560-66579 | Msa1422040:intron | 40.0% | |
| TCAATAAAGACGTAGGTTCG+GGG | + | tig0025333:66609-66628 | None:intergenic | 40.0% | |
| ACTCTATTCCCATTCCTCTT+AGG | - | tig0025333:66903-66922 | Msa1422040:intron | 40.0% | |
| CTCTATTCCCATTCCTCTTA+GGG | - | tig0025333:66904-66923 | Msa1422040:intron | 40.0% | |
| CAAAGATTCCCTAAGAGGAA+TGG | + | tig0025333:66915-66934 | None:intergenic | 40.0% | |
| ! | TTGCTTAAGTTGTGTCTCGT+GGG | - | tig0025333:67153-67172 | Msa1422040:intron | 40.0% |
| ATATTATGAGTGAGTGGCAG+AGG | - | tig0025333:67207-67226 | Msa1422040:intron | 40.0% | |
| TATTATGAGTGAGTGGCAGA+GGG | - | tig0025333:67208-67227 | Msa1422040:intron | 40.0% | |
| !! | TGTAGAAGTGTCAACCTAGT+TGG | - | tig0025333:67239-67258 | Msa1422040:intron | 40.0% |
| !! | GTAGAAGTGTCAACCTAGTT+GGG | - | tig0025333:67240-67259 | Msa1422040:intron | 40.0% |
| GTTGGGGAATGTTAAGATGA+AGG | + | tig0025333:67656-67675 | None:intergenic | 40.0% | |
| GGCTCGATGATTTAACTCTA+AGG | + | tig0025333:68234-68253 | None:intergenic | 40.0% | |
| ! | TAACGATTGGACTAGATCTG+AGG | + | tig0025333:68289-68308 | None:intergenic | 40.0% |
| AATCAAACAAATCCCGTCCA+AGG | + | tig0025333:68801-68820 | None:intergenic | 40.0% | |
| ! | CGGGATTTGTTTGATTGTCA+TGG | - | tig0025333:68805-68824 | Msa1422040:intron | 40.0% |
| AGAGATGAAACTGCATGCAA+AGG | - | tig0025333:68991-69010 | Msa1422040:intron | 40.0% | |
| !! | ACTAAGGAGTACCTTCATGA+AGG | - | tig0025333:69619-69638 | Msa1422040:intron | 40.0% |
| AAGGACAATGTGAATCATCG+AGG | - | tig0025333:69638-69657 | Msa1422040:intron | 40.0% | |
| CCTCTAAATCAAGATCAGCA+AGG | + | tig0025333:69747-69766 | None:intergenic | 40.0% | |
| CCTTGCTGATCTTGATTTAG+AGG | - | tig0025333:69744-69763 | Msa1422040:intron | 40.0% | |
| TTGCAGCATACAAGTCTCAT+TGG | - | tig0025333:62142-62161 | Msa1422040:CDS | 40.0% | |
| ! | GCATACAAGTCTCATTGGTT+CGG | - | tig0025333:62147-62166 | Msa1422040:CDS | 40.0% |
| !! | TCTCATTGGTTCGGATTGTA+AGG | - | tig0025333:62156-62175 | Msa1422040:CDS | 40.0% |
| AAGGTGGAGGAAGTTGACAA+AGG | - | tig0025333:61971-61990 | Msa1422040:CDS | 45.0% | |
| GCTTCATTGAAAGAGCTCCA+TGG | - | tig0025333:62049-62068 | Msa1422040:CDS | 45.0% | |
| AGAGCTAGATGGTGACATTG+AGG | - | tig0025333:62406-62425 | Msa1422040:intron | 45.0% | |
| !! | CTTGTACAGAGCTCTAGATC+AGG | + | tig0025333:62652-62671 | None:intergenic | 45.0% |
| ! | ATTTTCCACAGCAGTTCGGT+GGG | - | tig0025333:62815-62834 | Msa1422040:intron | 45.0% |
| TAAGGACCGACTAATCCGAA+AGG | + | tig0025333:62904-62923 | None:intergenic | 45.0% | |
| !! | TTTCGGATTAGTCGGTCCTT+AGG | - | tig0025333:62903-62922 | Msa1422040:intron | 45.0% |
| TGTCTGCTGCTGCATATTAC+AGG | + | tig0025333:63296-63315 | None:intergenic | 45.0% | |
| TGATTGTGATTGGGCAAAGG+GGG | + | tig0025333:64527-64546 | None:intergenic | 45.0% | |
| GGATGATTGTGATTGGGCAA+AGG | + | tig0025333:64530-64549 | None:intergenic | 45.0% | |
| ! | AAGAGGAAGTACAAGACTGG+GGG | - | tig0025333:64924-64943 | Msa1422040:intron | 45.0% |
| GGTTTGTGTCAGTGGTTATC+TGG | + | tig0025333:64961-64980 | None:intergenic | 45.0% | |
| ACCACTGACACAAACCCTAA+CGG | - | tig0025333:64965-64984 | Msa1422040:intron | 45.0% | |
| TCGATTTCGTATCCATGCGT+GGG | + | tig0025333:65065-65084 | None:intergenic | 45.0% | |
| TTCGATTTCGTATCCATGCG+TGG | + | tig0025333:65066-65085 | None:intergenic | 45.0% | |
| ATCGTCTGCCAACACAGAAA+CGG | - | tig0025333:65140-65159 | Msa1422040:intron | 45.0% | |
| ACCTTGAACCGTTTCTGTGT+TGG | + | tig0025333:65151-65170 | None:intergenic | 45.0% | |
| !!! | TTGGCTTGCTGGTGTTTTGA+GGG | + | tig0025333:65183-65202 | None:intergenic | 45.0% |
| !!! | TTTGGCTTGCTGGTGTTTTG+AGG | + | tig0025333:65184-65203 | None:intergenic | 45.0% |
| CCGACGTTTGTCCATTTATC+TGG | + | tig0025333:65240-65259 | None:intergenic | 45.0% | |
| CACAACTGTTTCATCCGTCA+CGG | + | tig0025333:65286-65305 | None:intergenic | 45.0% | |
| GACGGATGAAACAGTTGTGA+AGG | - | tig0025333:65287-65306 | Msa1422040:intron | 45.0% | |
| ! | GCATAGTCACTTTGTGTTGG+TGG | + | tig0025333:65331-65350 | None:intergenic | 45.0% |
| ! | GGTGCATAGTCACTTTGTGT+TGG | + | tig0025333:65334-65353 | None:intergenic | 45.0% |
| TTTCAGGAAGATGAAGCTGG+TGG | + | tig0025333:65476-65495 | None:intergenic | 45.0% | |
| AGGACCCGGAAACACAAAAA+TGG | - | tig0025333:65528-65547 | Msa1422040:intron | 45.0% | |
| !! | TACTCGATGACGGAACAGTT+AGG | + | tig0025333:65666-65685 | None:intergenic | 45.0% |
| AACTGTTCCGTCATCGAGTA+AGG | - | tig0025333:65666-65685 | Msa1422040:intron | 45.0% | |
| GTTTCTGCCTTACTCGATGA+CGG | + | tig0025333:65676-65695 | None:intergenic | 45.0% | |
| AAGGCAGAAACAACAACTCG+TGG | - | tig0025333:65685-65704 | Msa1422040:intron | 45.0% | |
| AGGCAGAAACAACAACTCGT+GGG | - | tig0025333:65686-65705 | Msa1422040:intron | 45.0% | |
| TATTAACGGCCAACTGGCAT+TGG | - | tig0025333:66322-66341 | Msa1422040:intron | 45.0% | |
| CTAAATTCGGCAATAGGAGG+AGG | - | tig0025333:66559-66578 | Msa1422040:intron | 45.0% | |
| ! | GTTGCTTAAGTTGTGTCTCG+TGG | - | tig0025333:67152-67171 | Msa1422040:intron | 45.0% |
| ! | ATGGTCCATGGCTCTCTTTT+TGG | + | tig0025333:67308-67327 | None:intergenic | 45.0% |
| AAAAAGAGAGCCATGGACCA+TGG | - | tig0025333:67307-67326 | Msa1422040:intron | 45.0% | |
| AGATGAATTCAGGGAGAGGT+GGG | + | tig0025333:67339-67358 | None:intergenic | 45.0% | |
| AGAGCGAGCAGATGAATTCA+GGG | + | tig0025333:67348-67367 | None:intergenic | 45.0% | |
| ATGTGATCCATAGTCGGTGT+CGG | - | tig0025333:68016-68035 | Msa1422040:intron | 45.0% | |
| AGGTATCCATCATCACTCGT+TGG | + | tig0025333:68685-68704 | None:intergenic | 45.0% | |
| CGAATTGAATCGCATGTCCT+TGG | - | tig0025333:68781-68800 | Msa1422040:intron | 45.0% | |
| TTGAATCGCATGTCCTTGGA+CGG | - | tig0025333:68785-68804 | Msa1422040:intron | 45.0% | |
| GATAGAGCTACTACATCGAG+AGG | - | tig0025333:68829-68848 | Msa1422040:intron | 45.0% | |
| ATCACCTTCTGCAGCACATA+AGG | + | tig0025333:68868-68887 | None:intergenic | 45.0% | |
| CAGGAATTGATTGCAAGGGA+AGG | - | tig0025333:69424-69443 | Msa1422040:intron | 45.0% | |
| AAACTTATCGTCCTTAGCGG+AGG | + | tig0025333:69459-69478 | None:intergenic | 45.0% | |
| ATTGTTGGATTCACCTCTGC+CGG | - | tig0025333:69557-69576 | Msa1422040:intron | 45.0% | |
| ATCAAATAGGTTACCGGCAG+AGG | + | tig0025333:69573-69592 | None:intergenic | 45.0% | |
| CATCAACATGCTCAAGAAGG+TGG | - | tig0025333:69690-69709 | Msa1422040:intron | 45.0% | |
| AAGGTGGAGGAAGTTGACAA+AGG | - | tig0025333:61971-61990 | Msa1422040:CDS | 45.0% | |
| !! | GCTTCATTGAAAGTGCTCCA+TGG | - | tig0025333:69784-69803 | Msa1422040:CDS | 45.0% |
| !!! | TTTTTTTTAAAAAAAAAACT+CGG | + | tig0025333:62936-62955 | None:intergenic | 5.0% |
| !!! | ATATATTATTTTATTAAAAC+TGG | - | tig0025333:64434-64453 | Msa1422040:intron | 5.0% |
| !! | ATAATATATATTAATGAAAA+GGG | + | tig0025333:67194-67213 | None:intergenic | 5.0% |
| !! | AAACATAAAAAATAAAAAAT+TGG | + | tig0025333:67800-67819 | None:intergenic | 5.0% |
| !!! | AATTTTTTATTTTTTATGTT+TGG | - | tig0025333:67799-67818 | Msa1422040:intron | 5.0% |
| GACCAAAGAGCTGAAGAAGG+TGG | - | tig0025333:61955-61974 | Msa1422040:CDS | 50.0% | |
| CTCCACCTTCTTCAGCTCTT+TGG | + | tig0025333:61960-61979 | None:intergenic | 50.0% | |
| CAAAGAGCTGAAGAAGGTGG+AGG | - | tig0025333:61958-61977 | Msa1422040:CDS | 50.0% | |
| TCAGCTCCATGGTGACATTG+AGG | - | tig0025333:62223-62242 | Msa1422040:CDS | 50.0% | |
| TTGCTGCCTCAATGTCACCA+TGG | + | tig0025333:62232-62251 | None:intergenic | 50.0% | |
| TGTGACCGAATGGCTGAAGA+AGG | - | tig0025333:62296-62315 | Msa1422040:intron | 50.0% | |
| CTCGACCTTCTTCAGCCATT+CGG | + | tig0025333:62304-62323 | None:intergenic | 50.0% | |
| GATCAGCAGCAGGGGAAATA+GGG | + | tig0025333:62347-62366 | None:intergenic | 50.0% | |
| AGATCAGCAGCAGGGGAAAT+AGG | + | tig0025333:62348-62367 | None:intergenic | 50.0% | |
| ! | GATTTTCCACAGCAGTTCGG+TGG | - | tig0025333:62814-62833 | Msa1422040:intron | 50.0% |
| CGATGTGGGATTGGACCTTT+CGG | - | tig0025333:62886-62905 | Msa1422040:intron | 50.0% | |
| ATTGCGTGAAGCTCTCCTAC+TGG | + | tig0025333:62979-62998 | None:intergenic | 50.0% | |
| TCCTGCAGGATGTTCTTGCA+AGG | - | tig0025333:63506-63525 | Msa1422040:intron | 50.0% | |
| TCCTTGCAAGAACATCCTGC+AGG | + | tig0025333:63510-63529 | None:intergenic | 50.0% | |
| ATTGTGATTGGGCAAAGGGG+GGG | + | tig0025333:64525-64544 | None:intergenic | 50.0% | |
| GATTGTGATTGGGCAAAGGG+GGG | + | tig0025333:64526-64545 | None:intergenic | 50.0% | |
| ! | AGAGGAAGTACAAGACTGGG+GGG | - | tig0025333:64925-64944 | Msa1422040:intron | 50.0% |
| CCACTGACACAAACCCTAAC+GGG | - | tig0025333:64966-64985 | Msa1422040:intron | 50.0% | |
| GCCAACACAGAAACGGTTCA+AGG | - | tig0025333:65147-65166 | Msa1422040:intron | 50.0% | |
| !!! | TGGTGTTTTGAGGGAGCTGT+TGG | + | tig0025333:65174-65193 | None:intergenic | 50.0% |
| ! | TCGGATTGATTGGCCCGAAA+GGG | + | tig0025333:65210-65229 | None:intergenic | 50.0% |
| ! | ATCGGATTGATTGGCCCGAA+AGG | + | tig0025333:65211-65230 | None:intergenic | 50.0% |
| GTCGGAACACAATCCACCTA+CGG | - | tig0025333:65255-65274 | Msa1422040:intron | 50.0% | |
| TCCTTGAGCTGTTGCGGTTA+CGG | + | tig0025333:65634-65653 | None:intergenic | 50.0% | |
| TGCTTGTCCTTGAGCTGTTG+CGG | + | tig0025333:65640-65659 | None:intergenic | 50.0% | |
| GCACAATCCCCATCAAAGTG+AGG | + | tig0025333:66522-66541 | None:intergenic | 50.0% | |
| CAGATGAATTCAGGGAGAGG+TGG | + | tig0025333:67340-67359 | None:intergenic | 50.0% | |
| GAGCAGATGAATTCAGGGAG+AGG | + | tig0025333:67343-67362 | None:intergenic | 50.0% | |
| GAGAGCGAGCAGATGAATTC+AGG | + | tig0025333:67349-67368 | None:intergenic | 50.0% | |
| ! | ATTACCACCGACACCGACTA+TGG | + | tig0025333:68026-68045 | None:intergenic | 50.0% |
| TGAATCGCATGTCCTTGGAC+GGG | - | tig0025333:68786-68805 | Msa1422040:intron | 50.0% | |
| ACCTCCTTATGTGCTGCAGA+AGG | - | tig0025333:68861-68880 | Msa1422040:intron | 50.0% | |
| ACCTTCTGCAGCACATAAGG+AGG | + | tig0025333:68865-68884 | None:intergenic | 50.0% | |
| CAGCGATGCTGCTACTAGAT+TGG | - | tig0025333:69054-69073 | Msa1422040:intron | 50.0% | |
| CAACATGCTCAAGAAGGTGG+AGG | - | tig0025333:69693-69712 | Msa1422040:intron | 50.0% | |
| CGAATGGCTGAAGAAGGTCG+AGG | - | tig0025333:62302-62321 | Msa1422040:intron | 55.0% | |
| ACTATCCCACCGAACTGCTG+TGG | + | tig0025333:62823-62842 | None:intergenic | 55.0% | |
| !! | TCCAATCCCACATCGACTCG+CGG | + | tig0025333:62881-62900 | None:intergenic | 55.0% |
| GTCAATGCGGAAATGCGGCT+CGG | - | tig0025333:63890-63909 | Msa1422040:intron | 55.0% | |
| GGCCAACCCAAAAATTGGCG+CGG | - | tig0025333:63916-63935 | Msa1422040:intron | 55.0% | |
| !!! | GGGGAGCTATTTTGGTGGTG+CGG | - | tig0025333:63948-63967 | Msa1422040:intron | 55.0% |
| AACTGGCGACAGTCCACACT+TGG | - | tig0025333:64451-64470 | Msa1422040:intron | 55.0% | |
| CCCGTTAGGGTTTGTGTCAG+TGG | + | tig0025333:64969-64988 | None:intergenic | 55.0% | |
| TATCCATGCGTGGGTTCGCT+TGG | + | tig0025333:65056-65075 | None:intergenic | 55.0% | |
| ! | AGCAAGCCAAAGCGCCCTTT+CGG | - | tig0025333:65193-65212 | Msa1422040:intron | 55.0% |
| CAGGAAGATGAAGCTGGTGG+AGG | + | tig0025333:65473-65492 | None:intergenic | 55.0% | |
| ACCGTAACCGCAACAGCTCA+AGG | - | tig0025333:65630-65649 | Msa1422040:intron | 55.0% | |
| ATTCGGCAATAGGAGGAGGG+TGG | - | tig0025333:66563-66582 | Msa1422040:intron | 55.0% | |
| AAAGACGTAGGTTCGGGGCA+GGG | + | tig0025333:66604-66623 | None:intergenic | 55.0% | |
| TAAAGACGTAGGTTCGGGGC+AGG | + | tig0025333:66605-66624 | None:intergenic | 55.0% | |
| AAGTTGTGTCTCGTGGGCAC+TGG | - | tig0025333:67159-67178 | Msa1422040:intron | 55.0% | |
| ATTCAGGGAGAGGTGGGTGT+GGG | + | tig0025333:67333-67352 | None:intergenic | 55.0% | |
| AATTCAGGGAGAGGTGGGTG+TGG | + | tig0025333:67334-67353 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTACCTCAGT+TGG | + | tig0025333:67739-67758 | None:intergenic | 55.0% | |
| CCAACTGAGGTAAGCTCACG+AGG | - | tig0025333:67736-67755 | Msa1422040:intron | 55.0% | |
| !! | TGATCCATAGTCGGTGTCGG+TGG | - | tig0025333:68019-68038 | Msa1422040:intron | 55.0% |
| TTAAGGAGCCCTCGTAGTCG+TGG | - | tig0025333:68176-68195 | Msa1422040:intron | 55.0% | |
| GTGAGCAACCACGACTACGA+GGG | + | tig0025333:68187-68206 | None:intergenic | 55.0% | |
| GGCATGTGAATCCTCCGCTA+AGG | - | tig0025333:69445-69464 | Msa1422040:intron | 55.0% | |
| TCCGCGAGTCGATGTGGGAT+TGG | - | tig0025333:62877-62896 | Msa1422040:intron | 60.0% | |
| GGCGCGGCCAACCCAAAAAT+TGG | - | tig0025333:63911-63930 | Msa1422040:intron | 60.0% | |
| !!! | CGCCGCGCCAATTTTTGGGT+TGG | + | tig0025333:63921-63940 | None:intergenic | 60.0% |
| ! | CCTGCGCCGCGCCAATTTTT+GGG | + | tig0025333:63925-63944 | None:intergenic | 60.0% |
| ! | TCCTGCGCCGCGCCAATTTT+TGG | + | tig0025333:63926-63945 | None:intergenic | 60.0% |
| ! | GCAGGAGCGGGGAGCTATTT+TGG | - | tig0025333:63940-63959 | Msa1422040:intron | 60.0% |
| !! | GGAGCGGGGAGCTATTTTGG+TGG | - | tig0025333:63943-63962 | Msa1422040:intron | 60.0% |
| !! | GAAAGGGCGCTTTGGCTTGC+TGG | + | tig0025333:65194-65213 | None:intergenic | 60.0% |
| ! | GCAAGCCAAAGCGCCCTTTC+GGG | - | tig0025333:65194-65213 | Msa1422040:intron | 60.0% |
| !! | ATTGGCCCGAAAGGGCGCTT+TGG | + | tig0025333:65202-65221 | None:intergenic | 60.0% |
| CACCTACGGCACAACCGTGA+CGG | - | tig0025333:65269-65288 | Msa1422040:intron | 60.0% | |
| ATCCGTCACGGTTGTGCCGT+AGG | + | tig0025333:65274-65293 | None:intergenic | 60.0% | |
| ATTGCCGGGGTTTGAACCCC+CGG | - | tig0025333:67686-67705 | Msa1422040:intron | 60.0% | |
| GGTGAGCAACCACGACTACG+AGG | + | tig0025333:68188-68207 | None:intergenic | 60.0% | |
| TGGGGATCCGCGAGTCGATG+TGG | - | tig0025333:62871-62890 | Msa1422040:intron | 65.0% | |
| GGGGATCCGCGAGTCGATGT+GGG | - | tig0025333:62872-62891 | Msa1422040:intron | 65.0% | |
| CCCAAAAATTGGCGCGGCGC+AGG | - | tig0025333:63922-63941 | Msa1422040:intron | 65.0% | |
| AAATTGGCGCGGCGCAGGAG+CGG | - | tig0025333:63927-63946 | Msa1422040:intron | 65.0% | |
| CAGCCAAGCGAACCCACGCA+TGG | - | tig0025333:65050-65069 | Msa1422040:intron | 65.0% | |
| CGTCACGGTTGTGCCGTAGG+TGG | + | tig0025333:65271-65290 | None:intergenic | 65.0% | |
| TGGGTGTGGGCCATGGTCCA+TGG | + | tig0025333:67320-67339 | None:intergenic | 65.0% | |
| AGGTCCGGGGGTTCAAACCC+CGG | + | tig0025333:67693-67712 | None:intergenic | 65.0% | |
| ! | TGCGGAAATGCGGCTCGGCG+CGG | - | tig0025333:63895-63914 | Msa1422040:intron | 70.0% |
| AATTGGCGCGGCGCAGGAGC+GGG | - | tig0025333:63928-63947 | Msa1422040:intron | 70.0% | |
| GGAGAGGTGGGTGTGGGCCA+TGG | + | tig0025333:67327-67346 | None:intergenic | 70.0% | |
| ATTGGCGCGGCGCAGGAGCG+GGG | - | tig0025333:63929-63948 | Msa1422040:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0025333 | gene | 61947 | 69936 | 61947 | ID=Msa1422040;Name=Msa1422040 |
| tig0025333 | mRNA | 61947 | 69936 | 61947 | ID=Msa1422040-mRNA-1;Parent=Msa1422040;Name=Msa1422040-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0|0|1|0.33|0.5|4|0|226 |
| tig0025333 | exon | 69768 | 69936 | 69768 | ID=Msa1422040-mRNA-1:exon:2409;Parent=Msa1422040-mRNA-1 |
| tig0025333 | exon | 63001 | 63125 | 63001 | ID=Msa1422040-mRNA-1:exon:2408;Parent=Msa1422040-mRNA-1 |
| tig0025333 | exon | 62305 | 62368 | 62305 | ID=Msa1422040-mRNA-1:exon:2407;Parent=Msa1422040-mRNA-1 |
| tig0025333 | exon | 61947 | 62269 | 61947 | ID=Msa1422040-mRNA-1:exon:2406;Parent=Msa1422040-mRNA-1 |
| tig0025333 | CDS | 69768 | 69936 | 69768 | ID=Msa1422040-mRNA-1:cds;Parent=Msa1422040-mRNA-1 |
| tig0025333 | CDS | 63001 | 63125 | 63001 | ID=Msa1422040-mRNA-1:cds;Parent=Msa1422040-mRNA-1 |
| tig0025333 | CDS | 62305 | 62368 | 62305 | ID=Msa1422040-mRNA-1:cds;Parent=Msa1422040-mRNA-1 |
| tig0025333 | CDS | 61947 | 62269 | 61947 | ID=Msa1422040-mRNA-1:cds;Parent=Msa1422040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
