Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1425490 | XP_039687124.1 | 80.000 | 385 | 45 | 6 | 80 | 451 | 4 | 369 | 0.0 | 612 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1425490 | sp|Q6NQK2|NAC8_ARATH | 46.563 | 451 | 179 | 14 | 51 | 451 | 5 | 443 | 5.67e-117 | 353 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1425490 | A0A896WDF1 | 73.333 | 405 | 90 | 7 | 50 | 451 | 1 | 390 | 0.0 | 599 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1425490 | TF | NAC |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1425490 | MtrunA17_Chr1g0198751 | 62.208 | 471 | 107 | 5 | 50 | 451 | 6 | 474 | 0.0 | 570 |
| Msa1425490 | MtrunA17_Chr1g0198741 | 82.550 | 298 | 32 | 4 | 158 | 451 | 8 | 289 | 5.57e-176 | 494 |
| Msa1425490 | MtrunA17_Chr5g0422431 | 57.991 | 438 | 138 | 9 | 50 | 447 | 4 | 435 | 5.01e-163 | 467 |
| Msa1425490 | MtrunA17_Chr7g0227071 | 53.271 | 214 | 98 | 1 | 52 | 263 | 5 | 218 | 3.39e-77 | 249 |
| Msa1425490 | MtrunA17_Chr2g0282871 | 54.762 | 210 | 92 | 2 | 76 | 282 | 25 | 234 | 1.10e-70 | 226 |
| Msa1425490 | MtrunA17_Chr4g0046431 | 45.878 | 279 | 131 | 8 | 60 | 321 | 19 | 294 | 6.80e-69 | 222 |
| Msa1425490 | MtrunA17_Chr8g0389661 | 51.131 | 221 | 98 | 4 | 80 | 292 | 27 | 245 | 4.17e-67 | 222 |
| Msa1425490 | MtrunA17_Chr4g0040541 | 55.080 | 187 | 79 | 2 | 81 | 262 | 24 | 210 | 1.12e-64 | 209 |
| Msa1425490 | MtrunA17_Chr8g0367761 | 52.195 | 205 | 90 | 4 | 60 | 256 | 19 | 223 | 3.29e-64 | 207 |
| Msa1425490 | MtrunA17_Chr2g0324961 | 55.914 | 186 | 78 | 2 | 81 | 262 | 25 | 210 | 8.98e-60 | 197 |
| Msa1425490 | MtrunA17_Chr6g0484441 | 33.520 | 179 | 88 | 10 | 102 | 272 | 5 | 160 | 1.73e-15 | 77.4 |
| Msa1425490 | MtrunA17_Chr2g0318101 | 36.000 | 150 | 70 | 10 | 100 | 242 | 13 | 143 | 1.16e-12 | 68.9 |
| Msa1425490 | MtrunA17_Chr1g0147421 | 31.765 | 170 | 93 | 9 | 102 | 264 | 27 | 180 | 2.14e-11 | 65.1 |
| Msa1425490 | MtrunA17_Chr8g0359921 | 34.752 | 141 | 76 | 6 | 102 | 241 | 14 | 139 | 2.14e-11 | 65.1 |
| Msa1425490 | MtrunA17_Chr3g0124761 | 35.417 | 144 | 72 | 8 | 102 | 242 | 7 | 132 | 5.15e-11 | 63.5 |
| Msa1425490 | MtrunA17_Chr4g0018391 | 24.891 | 229 | 142 | 9 | 102 | 322 | 7 | 213 | 8.28e-11 | 63.2 |
| Msa1425490 | MtrunA17_Chr3g0139331 | 30.675 | 163 | 91 | 9 | 102 | 258 | 11 | 157 | 9.83e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1425490 | AT1G25580.1 | 46.563 | 451 | 179 | 14 | 51 | 451 | 5 | 443 | 5.76e-118 | 353 |
| Msa1425490 | AT3G01600.1 | 51.339 | 224 | 104 | 3 | 51 | 272 | 4 | 224 | 5.42e-72 | 231 |
| Msa1425490 | AT5G14490.2 | 52.113 | 213 | 99 | 2 | 51 | 261 | 4 | 215 | 6.69e-70 | 223 |
| Msa1425490 | AT5G14490.4 | 52.113 | 213 | 99 | 2 | 51 | 261 | 4 | 215 | 1.05e-69 | 225 |
| Msa1425490 | AT5G14490.1 | 52.113 | 213 | 99 | 2 | 51 | 261 | 7 | 218 | 1.48e-69 | 225 |
| Msa1425490 | AT5G14490.3 | 52.113 | 213 | 99 | 2 | 51 | 261 | 7 | 218 | 2.65e-69 | 224 |
| Msa1425490 | AT4G29230.3 | 56.250 | 192 | 73 | 3 | 80 | 262 | 28 | 217 | 3.09e-69 | 227 |
| Msa1425490 | AT4G29230.1 | 56.250 | 192 | 73 | 3 | 80 | 262 | 28 | 217 | 1.33e-68 | 227 |
| Msa1425490 | AT4G29230.2 | 55.729 | 192 | 73 | 3 | 80 | 262 | 28 | 216 | 1.04e-67 | 224 |
| Msa1425490 | AT1G28470.1 | 50.000 | 232 | 104 | 4 | 43 | 267 | 17 | 243 | 1.01e-66 | 216 |
| Msa1425490 | AT5G56620.2 | 52.308 | 195 | 80 | 3 | 80 | 262 | 22 | 215 | 4.62e-64 | 212 |
| Msa1425490 | AT5G56620.3 | 52.308 | 195 | 80 | 3 | 80 | 262 | 22 | 215 | 4.88e-64 | 212 |
| Msa1425490 | AT5G56620.1 | 52.308 | 195 | 80 | 3 | 80 | 262 | 22 | 215 | 8.47e-64 | 211 |
| Msa1425490 | AT4G28500.1 | 49.776 | 223 | 98 | 5 | 51 | 262 | 2 | 221 | 1.81e-63 | 207 |
| Msa1425490 | AT3G18400.1 | 32.738 | 168 | 92 | 7 | 102 | 264 | 5 | 156 | 1.47e-13 | 71.6 |
| Msa1425490 | AT5G18270.2 | 30.041 | 243 | 121 | 14 | 94 | 315 | 13 | 227 | 2.96e-13 | 71.2 |
| Msa1425490 | AT5G18270.1 | 30.041 | 243 | 121 | 14 | 94 | 315 | 13 | 227 | 3.93e-13 | 70.9 |
| Msa1425490 | AT5G39610.1 | 33.721 | 172 | 86 | 7 | 87 | 257 | 10 | 154 | 1.50e-12 | 68.6 |
| Msa1425490 | AT1G01720.1 | 36.111 | 144 | 71 | 8 | 102 | 242 | 7 | 132 | 4.61e-12 | 67.0 |
| Msa1425490 | AT3G04420.2 | 31.056 | 161 | 94 | 7 | 103 | 260 | 4 | 150 | 2.51e-11 | 64.7 |
| Msa1425490 | AT1G02230.1 | 31.361 | 169 | 92 | 8 | 103 | 264 | 4 | 155 | 3.23e-11 | 65.1 |
| Msa1425490 | AT3G12910.1 | 30.864 | 162 | 91 | 8 | 91 | 246 | 9 | 155 | 4.03e-11 | 64.3 |
| Msa1425490 | AT1G02220.1 | 29.375 | 160 | 93 | 6 | 103 | 259 | 4 | 146 | 4.90e-11 | 64.7 |
| Msa1425490 | AT3G04420.1 | 31.056 | 161 | 94 | 7 | 103 | 260 | 4 | 150 | 9.42e-11 | 63.5 |
Find 108 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTTCTTGGTCTACAAAAT+TGG | 0.165705 | tig0025858:-19454 | Msa1425490:intergenic |
| TTGTAATTTCAAATTGATTT+TGG | 0.174300 | tig0025858:+15126 | Msa1425490:CDS |
| TGCCAGTGTGGTCAAGATTT+TGG | 0.220058 | tig0025858:-20240 | Msa1425490:intergenic |
| TATGGTGAGTTTCTTGTTCT+TGG | 0.221376 | tig0025858:-19467 | Msa1425490:intergenic |
| ATAGTTGCTTCCGCGGTTTC+AGG | 0.226841 | tig0025858:-19372 | Msa1425490:intergenic |
| TCCACAACATGTTGACAATT+AGG | 0.244707 | tig0025858:-16512 | Msa1425490:intergenic |
| AGGTTCAGTGGTCGCAAAAT+TGG | 0.270772 | tig0025858:-19418 | Msa1425490:intergenic |
| ATTTATCACTACTCTTAAAA+TGG | 0.271764 | tig0025858:+18870 | Msa1425490:CDS |
| CCAGCAGCAGCAAGCCATAT+TGG | 0.276087 | tig0025858:+19326 | Msa1425490:CDS |
| TCGAACCAAGAAAATGTTTC+CGG | 0.290852 | tig0025858:-20094 | Msa1425490:intergenic |
| TGACATGCCACTGAATCTAT+TGG | 0.299354 | tig0025858:+20063 | Msa1425490:CDS |
| CATCTGATCAAGAGATAATA+TGG | 0.323541 | tig0025858:+18791 | Msa1425490:CDS |
| TCTTCTAACTGAGGAAGATT+TGG | 0.326168 | tig0025858:-19947 | Msa1425490:intergenic |
| GGATCAAATTTAACACCTTT+AGG | 0.328542 | tig0025858:-18769 | Msa1425490:intergenic |
| CCACAACATGTTGACAATTA+GGG | 0.332418 | tig0025858:-16511 | Msa1425490:intergenic |
| ATGTCTTTCTTTAACTGCTC+TGG | 0.340220 | tig0025858:-20208 | Msa1425490:intergenic |
| GAATCTATTGGATTCACTTC+CGG | 0.358496 | tig0025858:+20075 | Msa1425490:CDS |
| TGTTCTTGGTCTACAAAATT+GGG | 0.368626 | tig0025858:-19453 | Msa1425490:intergenic |
| GTACACTTGCAACCGCTATA+AGG | 0.374099 | tig0025858:+16432 | Msa1425490:CDS |
| CAGCAGCAGCAAGCCATATT+GGG | 0.389779 | tig0025858:+19327 | Msa1425490:CDS |
| TATAAGCTTTCACTGCTCTA+TGG | 0.392319 | tig0025858:-19053 | Msa1425490:intergenic |
| CTTTATATGTTTCCAGAGAA+TGG | 0.394253 | tig0025858:+19204 | Msa1425490:CDS |
| TGAACTCCGTTCAAGAAGAT+AGG | 0.395219 | tig0025858:-19156 | Msa1425490:intergenic |
| GGTTACAAACCTCTGCAAAA+TGG | 0.397380 | tig0025858:-15915 | Msa1425490:intergenic |
| AATTCGATGGAGATGGTTGT+AGG | 0.404173 | tig0025858:+15170 | Msa1425490:CDS |
| CCAATATGGCTTGCTGCTGC+TGG | 0.415718 | tig0025858:-19326 | Msa1425490:intergenic |
| ACCGCTATAAGGTGTGCATC+TGG | 0.428125 | tig0025858:+16443 | Msa1425490:CDS |
| TATGTCCGCTGGCACAAGAC+TGG | 0.431620 | tig0025858:+19123 | Msa1425490:CDS |
| GGTTCAGTGGTCGCAAAATT+GGG | 0.435686 | tig0025858:-19417 | Msa1425490:intergenic |
| GCAGTGAAAGCTTATAGTAC+TGG | 0.438200 | tig0025858:+19060 | Msa1425490:CDS |
| CGACATTCGATTAAGTCAAC+TGG | 0.441693 | tig0025858:+20288 | Msa1425490:CDS |
| AAAGTTCTACCTGAGGAATA+TGG | 0.448471 | tig0025858:-19485 | Msa1425490:intergenic |
| AGAATGGCTACTTAATAGTC+AGG | 0.475425 | tig0025858:+19967 | Msa1425490:CDS |
| TTAACACCTTTAGGAAGTCC+AGG | 0.482399 | tig0025858:-18760 | Msa1425490:intergenic |
| CTCCATCGAATTCTAAACTA+GGG | 0.482757 | tig0025858:-15159 | Msa1425490:intergenic |
| GCCAGTCTCCGAAAAGGCAC+AGG | 0.483606 | tig0025858:+20131 | Msa1425490:CDS |
| AATATAGGTGTTTCACAAGA+TGG | 0.488029 | tig0025858:+19012 | Msa1425490:intron |
| CAGAAGAGGATGAGAGGGAA+GGG | 0.488806 | tig0025858:+19277 | Msa1425490:CDS |
| GTTATGCATCAGTATCATCT+TGG | 0.493181 | tig0025858:+19252 | Msa1425490:CDS |
| CTTTCGACATATGATCATCT+AGG | 0.495768 | tig0025858:+20184 | Msa1425490:CDS |
| TAGAAACTCAATTTCATGTA+GGG | 0.504338 | tig0025858:+20029 | Msa1425490:CDS |
| ACTCATCCTCAGCATTTGCC+AGG | 0.505505 | tig0025858:+18910 | Msa1425490:CDS |
| TTCAAAGCCAGTCTCCGAAA+AGG | 0.507580 | tig0025858:+20125 | Msa1425490:CDS |
| TTTCCAGAGAATGGAGGAAA+AGG | 0.510158 | tig0025858:+19213 | Msa1425490:CDS |
| ACTACTCTTAAAATGGATGA+TGG | 0.510952 | tig0025858:+18877 | Msa1425490:CDS |
| ACAAAATTGGGACTGATAAG+AGG | 0.512652 | tig0025858:-19441 | Msa1425490:intergenic |
| GTGATAAATGCATCGATGAA+AGG | 0.516322 | tig0025858:-18856 | Msa1425490:intergenic |
| AAGAGTTTGCTTATGTCCGC+TGG | 0.517104 | tig0025858:+19112 | Msa1425490:CDS |
| TGATAAATGCATCGATGAAA+GGG | 0.518562 | tig0025858:-18855 | Msa1425490:intergenic |
| AGTTTAGAATTCGATGGAGA+TGG | 0.520501 | tig0025858:+15163 | Msa1425490:CDS |
| ACAGAAGAGGATGAGAGGGA+AGG | 0.522455 | tig0025858:+19276 | Msa1425490:CDS |
| CGAAAGCGGCGAAGAATATG+TGG | 0.522848 | tig0025858:+19087 | Msa1425490:CDS |
| TAGCGGTTGCAAGTGTACTT+TGG | 0.525421 | tig0025858:-16427 | Msa1425490:intergenic |
| TCTCCATCGAATTCTAAACT+AGG | 0.527571 | tig0025858:-15160 | Msa1425490:intergenic |
| TTCTTGAACGGAGTTCAGAA+AGG | 0.529603 | tig0025858:+19162 | Msa1425490:CDS |
| ATCTTCCTCAGTTAGAAGAA+TGG | 0.529692 | tig0025858:+19951 | Msa1425490:CDS |
| CAATTAGGGCACGCTCTGGT+AGG | 0.534555 | tig0025858:-16497 | Msa1425490:intergenic |
| CATATTATCTCTTGATCAGA+TGG | 0.535616 | tig0025858:-18790 | Msa1425490:intergenic |
| TGGCACTTGCTTGCAAAAGT+TGG | 0.539348 | tig0025858:+18811 | Msa1425490:CDS |
| TCTTTCCAGTCTTGTGCCAG+CGG | 0.546974 | tig0025858:-19128 | Msa1425490:intergenic |
| TTGACAATTAGGGCACGCTC+TGG | 0.548349 | tig0025858:-16501 | Msa1425490:intergenic |
| TCCCCTAGTTTAGAATTCGA+TGG | 0.548881 | tig0025858:+15157 | Msa1425490:CDS |
| GAGTGGCCTGGACTTCCTAA+AGG | 0.554416 | tig0025858:+18754 | Msa1425490:CDS |
| ATGCAGACCATCGTGGTTGG+TGG | 0.556083 | tig0025858:+16403 | Msa1425490:intron |
| GTAGAAACTCAATTTCATGT+AGG | 0.560253 | tig0025858:+20028 | Msa1425490:CDS |
| TGGAACAGAAGAGGATGAGA+GGG | 0.560783 | tig0025858:+19272 | Msa1425490:CDS |
| TCACAGGAGCTATATCGACT+AGG | 0.561856 | tig0025858:+20421 | Msa1425490:CDS |
| CCCTAATTGTCAACATGTTG+TGG | 0.563512 | tig0025858:+16511 | Msa1425490:CDS |
| AGAAACTCACCATATTCCTC+AGG | 0.572055 | tig0025858:+19476 | Msa1425490:CDS |
| TTGCTTGCAAAAGTTGGTGA+AGG | 0.575602 | tig0025858:+18817 | Msa1425490:CDS |
| TAGGTAACACAAGAGTGGCC+TGG | 0.577846 | tig0025858:+18742 | Msa1425490:intron |
| CACAGGAGCTATATCGACTA+GGG | 0.578105 | tig0025858:+20422 | Msa1425490:CDS |
| ATAGTCAGGATGACTGTGAA+GGG | 0.580319 | tig0025858:+19981 | Msa1425490:CDS |
| ACTAAACCTATCTTCTTGAA+CGG | 0.586510 | tig0025858:+19150 | Msa1425490:CDS |
| TGATCATATGTCGAAAGACT+AGG | 0.588679 | tig0025858:-20178 | Msa1425490:intergenic |
| CTTATAGGAATTCAGCTCAC+AGG | 0.592344 | tig0025858:+20405 | Msa1425490:intron |
| AAATCAATTTGAAATTACAA+AGG | 0.596325 | tig0025858:-15123 | Msa1425490:intergenic |
| TTGGAACAGAAGAGGATGAG+AGG | 0.602637 | tig0025858:+19271 | Msa1425490:CDS |
| AATAGTCAGGATGACTGTGA+AGG | 0.603938 | tig0025858:+19980 | Msa1425490:CDS |
| TGAAATTGAGTTTCTACCGT+CGG | 0.610371 | tig0025858:-20022 | Msa1425490:intergenic |
| CAGTTGACTTAATCGAATGT+CGG | 0.615405 | tig0025858:-20287 | Msa1425490:intergenic |
| AATGCATCGATGAAAGGGTG+AGG | 0.617026 | tig0025858:-18850 | Msa1425490:intergenic |
| TTAGTTTCTCATGTTGACCA+AGG | 0.618507 | tig0025858:+15208 | Msa1425490:CDS |
| GTATCATCTTGGAACAGAAG+AGG | 0.624650 | tig0025858:+19263 | Msa1425490:CDS |
| AGTAGCCATTCTTCTAACTG+AGG | 0.625387 | tig0025858:-19956 | Msa1425490:intergenic |
| CCAGTCTCCGAAAAGGCACA+GGG | 0.626166 | tig0025858:+20132 | Msa1425490:CDS |
| ATTCGCAATAGTTGCTTCCG+CGG | 0.627295 | tig0025858:-19379 | Msa1425490:intergenic |
| TCCAGATGCACACCTTATAG+CGG | 0.632029 | tig0025858:-16444 | Msa1425490:intergenic |
| CAAGCTCTACATTGCCAGTG+TGG | 0.632863 | tig0025858:-20252 | Msa1425490:intergenic |
| TATATGCAGACCATCGTGGT+TGG | 0.636765 | tig0025858:+16400 | Msa1425490:intron |
| TCAAGATGTTCCTGAAACCG+CGG | 0.637589 | tig0025858:+19362 | Msa1425490:CDS |
| AGTGAATCCAATAGATTCAG+TGG | 0.638302 | tig0025858:-20070 | Msa1425490:intergenic |
| TACAAACCTCTGCAAAATGG+AGG | 0.639210 | tig0025858:-15912 | Msa1425490:intergenic |
| AGAGCAGTTAAAGAAAGACA+TGG | 0.639913 | tig0025858:+20210 | Msa1425490:CDS |
| CATATGTCGAAAGACTAGGC+TGG | 0.640562 | tig0025858:-20174 | Msa1425490:intergenic |
| GTTGTTAGGTAACACAAGAG+TGG | 0.643631 | tig0025858:+18737 | Msa1425490:intron |
| TCCATCGAATTCTAAACTAG+GGG | 0.643855 | tig0025858:-15158 | Msa1425490:intergenic |
| TATCCACCTGGCAAATGCTG+AGG | 0.644206 | tig0025858:-18916 | Msa1425490:intergenic |
| ATAGTACTGGAAGTCGAAAG+CGG | 0.647551 | tig0025858:+19073 | Msa1425490:CDS |
| ACTGATAAGAGGAGGTTCAG+TGG | 0.655003 | tig0025858:-19430 | Msa1425490:intergenic |
| CTTATATATGCAGACCATCG+TGG | 0.659760 | tig0025858:+16396 | Msa1425490:intron |
| TCCGAAAATTGATCTACCGA+CGG | 0.660122 | tig0025858:+20006 | Msa1425490:CDS |
| TATATGTTTCCAGAGAATGG+AGG | 0.668040 | tig0025858:+19207 | Msa1425490:CDS |
| TGCCAAAATCTTGACCACAC+TGG | 0.683464 | tig0025858:+20238 | Msa1425490:CDS |
| CTTTGGTCCACCAACCACGA+TGG | 0.684049 | tig0025858:-16410 | Msa1425490:intergenic |
| AAATTGGGACTGATAAGAGG+AGG | 0.689769 | tig0025858:-19438 | Msa1425490:intergenic |
| AGGAGCTATATCGACTAGGG+TGG | 0.690179 | tig0025858:+20425 | Msa1425490:CDS |
| ATTACAAAGGATGATCAACA+TGG | 0.723104 | tig0025858:-15110 | Msa1425480:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATAAAATATTAATATT+AGG | + | tig0025858:17133-17152 | Msa1425490:intron | 0.0% |
| !! | TAAATAAAATATTAATATTA+GGG | + | tig0025858:17134-17153 | Msa1425490:intron | 0.0% |
| !! | ATTATAGAAAAATAATGTTA+GGG | - | tig0025858:18229-18248 | Msa1425490:intergenic | 10.0% |
| !! | TATTATAGAAAAATAATGTT+AGG | - | tig0025858:18230-18249 | Msa1425490:intergenic | 10.0% |
| !! | ATAAAATGAATTTAACATAA+TGG | - | tig0025858:20340-20359 | Msa1425490:intergenic | 10.0% |
| !!! | AAATCAATTTGAAATTACAA+AGG | - | tig0025858:15126-15145 | Msa1333210:intergenic | 15.0% |
| !!! | TTGTAATTTCAAATTGATTT+TGG | + | tig0025858:15126-15145 | Msa1425490:CDS | 15.0% |
| !! | AACAAATCAAAGAAATTTAA+AGG | - | tig0025858:16750-16769 | Msa1425490:intergenic | 15.0% |
| !!! | ACACAGATTTTTATTTATAT+AGG | - | tig0025858:18172-18191 | Msa1425490:intergenic | 15.0% |
| !! | ATACAATAAGAAAATATTAG+TGG | - | tig0025858:19561-19580 | Msa1425490:intergenic | 15.0% |
| !! | AAAAGAATGTCTAAAAATAA+TGG | - | tig0025858:19650-19669 | Msa1425490:intergenic | 15.0% |
| !!! | GAGATTAATTTTAATAGTTT+TGG | + | tig0025858:19857-19876 | Msa1425490:intron | 15.0% |
| !!! | TATTGACTTTAATTTTCTCA+CGG | - | tig0025858:15578-15597 | Msa1425490:intergenic | 20.0% |
| !! | TGAGAAAATTAAAGTCAATA+AGG | + | tig0025858:15578-15597 | Msa1425490:intron | 20.0% |
| !!! | TGTTTTAAATCATATTTCAC+TGG | + | tig0025858:16577-16596 | Msa1425490:intron | 20.0% |
| !!! | TGTGATTTGTTAAATGAATA+TGG | - | tig0025858:16682-16701 | Msa1425490:intergenic | 20.0% |
| !! | AGAATGTAGAAGAAATTTAA+AGG | - | tig0025858:16789-16808 | Msa1425490:intergenic | 20.0% |
| !! | AAATAAATTGCTCAACTTAA+AGG | - | tig0025858:17389-17408 | Msa1425490:intergenic | 20.0% |
| !! | AATTGTAGATGGATAAATAA+AGG | - | tig0025858:17453-17472 | Msa1425490:intergenic | 20.0% |
| !!! | ACTTATTTTACTTAGAAGTT+AGG | - | tig0025858:18201-18220 | Msa1425490:intergenic | 20.0% |
| !! | TAAGAACAAAGATCAAAATT+GGG | - | tig0025858:18618-18637 | Msa1425490:intergenic | 20.0% |
| !! | ATAAGAACAAAGATCAAAAT+TGG | - | tig0025858:18619-18638 | Msa1425490:intergenic | 20.0% |
| !! | AAGAACAAAGATCAAATTAT+TGG | - | tig0025858:18650-18669 | Msa1425490:intergenic | 20.0% |
| !! | ATATATAAGTGTGATACTTT+AGG | - | tig0025858:18694-18713 | Msa1425490:intergenic | 20.0% |
| !! | TTTGAATAATTTCTGTTGTT+AGG | + | tig0025858:18723-18742 | Msa1425490:intron | 20.0% |
| !! | ATTTATCACTACTCTTAAAA+TGG | + | tig0025858:18870-18889 | Msa1425490:CDS | 20.0% |
| !! | GCTATATGATTAAACAATAT+AGG | + | tig0025858:18997-19016 | Msa1425490:intron | 20.0% |
| !!! | TTTTCTTGTGTAAATGAATT+AGG | + | tig0025858:19744-19763 | Msa1425490:intron | 20.0% |
| !!! | ATTTTAATAGTTTTGGTTTG+TGG | + | tig0025858:19864-19883 | Msa1425490:intron | 20.0% |
| !! | AAATATGAAAATAACCTAAG+TGG | + | tig0025858:19887-19906 | Msa1425490:intron | 20.0% |
| ! | TAATTGACTACAATTTACTC+TGG | - | tig0025858:15270-15289 | Msa1425490:intergenic | 25.0% |
| ! | AGAGTAAATTGTAGTCAATT+AGG | + | tig0025858:15269-15288 | Msa1425490:intron | 25.0% |
| !! | ATTTTAAATCTTGACCTCTA+TGG | - | tig0025858:15328-15347 | Msa1425490:intergenic | 25.0% |
| ! | TGAACAAATTGTAGTCAATT+AGG | + | tig0025858:15817-15836 | Msa1425490:intron | 25.0% |
| !! | TTTAAAGGAATGTTGATGAA+AGG | - | tig0025858:16735-16754 | Msa1425490:intergenic | 25.0% |
| ! | GGAAAATAGAAAATAAATGG+AGG | - | tig0025858:17236-17255 | Msa1425490:intergenic | 25.0% |
| ! | GTGGGAAAATAGAAAATAAA+TGG | - | tig0025858:17239-17258 | Msa1425490:intergenic | 25.0% |
| ! | ATGGCTCTTAATATTATTTG+TGG | + | tig0025858:17329-17348 | Msa1425490:intron | 25.0% |
| ! | TCCATCTACAATTGAAAAAA+AGG | + | tig0025858:17460-17479 | Msa1425490:intron | 25.0% |
| !!! | ACCTTTTTTTCAATTGTAGA+TGG | - | tig0025858:17464-17483 | Msa1425490:intergenic | 25.0% |
| ! | AAAACAATGATGATCAATGA+GGG | - | tig0025858:17523-17542 | Msa1425490:intergenic | 25.0% |
| !! | CTCAACAGTAAATTTGAAAT+CGG | + | tig0025858:17819-17838 | Msa1425490:intron | 25.0% |
| !! | TCAACAGTAAATTTGAAATC+GGG | + | tig0025858:17820-17839 | Msa1425490:intron | 25.0% |
| ! | AAGGATGTTGTATTTGATAT+GGG | - | tig0025858:17913-17932 | Msa1425490:intergenic | 25.0% |
| ! | TTTGTGCTTCATAAAAACTA+TGG | + | tig0025858:17982-18001 | Msa1425490:intron | 25.0% |
| ! | ATGCAGTTATATCGATATTA+GGG | - | tig0025858:18259-18278 | Msa1425490:intergenic | 25.0% |
| ! | AAAAAAAAAAGGGTTTCTGT+TGG | - | tig0025858:18296-18315 | Msa1425490:intergenic | 25.0% |
| ! | AGAGGGAAAGAAAAAAAAAA+GGG | - | tig0025858:18306-18325 | Msa1425490:intergenic | 25.0% |
| ! | AAGAGGGAAAGAAAAAAAAA+AGG | - | tig0025858:18307-18326 | Msa1425490:intergenic | 25.0% |
| ! | AATTTATTCCTGTGTGATTA+GGG | + | tig0025858:18386-18405 | Msa1425490:intron | 25.0% |
| ! | CTAAATCATTCACAATGATT+TGG | - | tig0025858:18514-18533 | Msa1425490:intergenic | 25.0% |
| ! | ATGCTATAATGTCATGTATT+TGG | - | tig0025858:18565-18584 | Msa1425490:intergenic | 25.0% |
| ! | AAATACATGACATTATAGCA+TGG | + | tig0025858:18564-18583 | Msa1425490:intron | 25.0% |
| !!! | TGTATCTTTTGCTTTGTTTT+TGG | + | tig0025858:19576-19595 | Msa1425490:intron | 25.0% |
| !! | ACATTCTTTTGCTTTCTTAT+TGG | + | tig0025858:19660-19679 | Msa1425490:intron | 25.0% |
| !! | TGACACGAAATATTAATTTG+TGG | + | tig0025858:19695-19714 | Msa1425490:intron | 25.0% |
| ! | AAGAACAAAATTATCCACTT+AGG | - | tig0025858:19904-19923 | Msa1425490:intergenic | 25.0% |
| ! | TAGAAACTCAATTTCATGTA+GGG | + | tig0025858:20029-20048 | Msa1425490:CDS | 25.0% |
| ! | ACAATCACGATTTAAAACCT+TGG | - | tig0025858:15228-15247 | Msa1425490:intergenic | 30.0% |
| GTATGATGCAATTGCAATTA+CGG | + | tig0025858:15291-15310 | Msa1425490:intron | 30.0% | |
| ! | GATTTAAAATCGAGTTTGTC+AGG | + | tig0025858:15338-15357 | Msa1425490:intron | 30.0% |
| ! | TAATTGGCTACATTTTTCTC+AGG | - | tig0025858:15380-15399 | Msa1425490:intergenic | 30.0% |
| TGAGAAAAATGTAGCCAATT+AGG | + | tig0025858:15379-15398 | Msa1425490:intron | 30.0% | |
| ATTTACAACCTTGATCTTTC+AGG | - | tig0025858:15438-15457 | Msa1425490:intergenic | 30.0% | |
| !!! | GTTGTAAATCGTGGTTTTTT+GGG | + | tig0025858:15449-15468 | Msa1425490:intron | 30.0% |
| !!! | TTGTAAATCGTGGTTTTTTG+GGG | + | tig0025858:15450-15469 | Msa1425490:intron | 30.0% |
| CTATACGAGACAATCAAATA+TGG | + | tig0025858:15479-15498 | Msa1425490:intron | 30.0% | |
| GTATGATACAAGTGTAATTG+TGG | + | tig0025858:15600-15619 | Msa1425490:intron | 30.0% | |
| ATACAAGTGTAATTGTGGTT+AGG | + | tig0025858:15605-15624 | Msa1425490:intron | 30.0% | |
| AATCACAACACAATCATGAT+GGG | - | tig0025858:15666-15685 | Msa1425490:intergenic | 30.0% | |
| ! | ACAACTGCAATTTAAAACCA+TGG | - | tig0025858:15884-15903 | Msa1425490:intergenic | 30.0% |
| AAAGTTTGCAAGCATAATCT+AGG | - | tig0025858:16069-16088 | Msa1425490:intergenic | 30.0% | |
| ! | ACTTTCTGATGTAACTTTTG+CGG | - | tig0025858:16474-16493 | Msa1425490:intergenic | 30.0% |
| ! | GAAGAAATAGATTTAGAGCT+TGG | - | tig0025858:16713-16732 | Msa1425490:intergenic | 30.0% |
| CAAGAGATGCACAAAAAATT+AGG | + | tig0025858:16978-16997 | Msa1425490:intron | 30.0% | |
| !! | GAAATTCTAAAATGTACGAC+AGG | + | tig0025858:17156-17175 | Msa1425490:intron | 30.0% |
| TGTTTACACTTACCATAGAA+GGG | - | tig0025858:17266-17285 | Msa1425490:intergenic | 30.0% | |
| TTGTTTACACTTACCATAGA+AGG | - | tig0025858:17267-17286 | Msa1425490:intergenic | 30.0% | |
| CAAAACAATGATGATCAATG+AGG | - | tig0025858:17524-17543 | Msa1425490:intergenic | 30.0% | |
| GAAGGATGTTGTATTTGATA+TGG | - | tig0025858:17914-17933 | Msa1425490:intergenic | 30.0% | |
| AATACAACATCCTTCTCTAA+CGG | + | tig0025858:17919-17938 | Msa1425490:intron | 30.0% | |
| ! | CAAAGATTAGATGTATTGGT+GGG | - | tig0025858:17957-17976 | Msa1425490:intergenic | 30.0% |
| TCAAAGATTAGATGTATTGG+TGG | - | tig0025858:17958-17977 | Msa1425490:intergenic | 30.0% | |
| ACCAATACATCTAATCTTTG+AGG | + | tig0025858:17957-17976 | Msa1425490:intron | 30.0% | |
| ACCTCAAAGATTAGATGTAT+TGG | - | tig0025858:17961-17980 | Msa1425490:intergenic | 30.0% | |
| GAGAGAAGAGAACTATATTA+GGG | - | tig0025858:18054-18073 | Msa1425490:intergenic | 30.0% | |
| TGAGAGAAGAGAACTATATT+AGG | - | tig0025858:18055-18074 | Msa1425490:intergenic | 30.0% | |
| CATGCAGTTATATCGATATT+AGG | - | tig0025858:18260-18279 | Msa1425490:intergenic | 30.0% | |
| GTATTACATCTACGTCTATT+GGG | - | tig0025858:18357-18376 | Msa1425490:intergenic | 30.0% | |
| TGTATTACATCTACGTCTAT+TGG | - | tig0025858:18358-18377 | Msa1425490:intergenic | 30.0% | |
| GAATTTATTCCTGTGTGATT+AGG | + | tig0025858:18385-18404 | Msa1425490:intron | 30.0% | |
| ! | TTACTAGCTAGTATTTCTAC+GGG | - | tig0025858:18424-18443 | Msa1425490:intergenic | 30.0% |
| ! | CTTACTAGCTAGTATTTCTA+CGG | - | tig0025858:18425-18444 | Msa1425490:intergenic | 30.0% |
| AGTAGACCAAATGAATGATA+GGG | + | tig0025858:18448-18467 | Msa1425490:intron | 30.0% | |
| GGATCAAATTTAACACCTTT+AGG | - | tig0025858:18772-18791 | Msa1425490:intergenic | 30.0% | |
| CATATTATCTCTTGATCAGA+TGG | - | tig0025858:18793-18812 | Msa1425490:intergenic | 30.0% | |
| CATCTGATCAAGAGATAATA+TGG | + | tig0025858:18791-18810 | Msa1425490:CDS | 30.0% | |
| ! | TGATAAATGCATCGATGAAA+GGG | - | tig0025858:18858-18877 | Msa1425490:intergenic | 30.0% |
| ACTACTCTTAAAATGGATGA+TGG | + | tig0025858:18877-18896 | Msa1425490:CDS | 30.0% | |
| AATATAGGTGTTTCACAAGA+TGG | + | tig0025858:19012-19031 | Msa1425490:intron | 30.0% | |
| ACTAAACCTATCTTCTTGAA+CGG | + | tig0025858:19150-19169 | Msa1425490:CDS | 30.0% | |
| CTTTATATGTTTCCAGAGAA+TGG | + | tig0025858:19204-19223 | Msa1425490:CDS | 30.0% | |
| ! | AAAAGGTGCAAAAACTAACT+GGG | + | tig0025858:19230-19249 | Msa1425490:CDS | 30.0% |
| ! | ATCATCTTTTCTTCCCAATA+TGG | - | tig0025858:19343-19362 | Msa1425490:intergenic | 30.0% |
| TGTTCTTGGTCTACAAAATT+GGG | - | tig0025858:19456-19475 | Msa1425490:intergenic | 30.0% | |
| TTGTTCTTGGTCTACAAAAT+TGG | - | tig0025858:19457-19476 | Msa1425490:intergenic | 30.0% | |
| !!! | TTTTGCTTTGTTTTTGGAAG+AGG | + | tig0025858:19582-19601 | Msa1425490:intron | 30.0% |
| !!! | TTTGCTTTGTTTTTGGAAGA+GGG | + | tig0025858:19583-19602 | Msa1425490:intron | 30.0% |
| ! | TCTTTTGCTTTCTTATTGGT+TGG | + | tig0025858:19664-19683 | Msa1425490:intron | 30.0% |
| TCTTGTGTAAATGAATTAGG+AGG | + | tig0025858:19747-19766 | Msa1425490:intron | 30.0% | |
| ! | AATAGTTTAGCTTAAGACCA+GGG | + | tig0025858:19770-19789 | Msa1425490:intron | 30.0% |
| TGAATTAAGAATTAGAACCC+TGG | - | tig0025858:19790-19809 | Msa1425490:intergenic | 30.0% | |
| TTTCTAACACCAATTCAGAA+TGG | + | tig0025858:19814-19833 | Msa1425490:intron | 30.0% | |
| TTCTAACACCAATTCAGAAT+GGG | + | tig0025858:19815-19834 | Msa1425490:intron | 30.0% | |
| GTAGAAACTCAATTTCATGT+AGG | + | tig0025858:20028-20047 | Msa1425490:CDS | 30.0% | |
| ! | TGATGCATTTTTGTGCTTAT+AGG | + | tig0025858:20390-20409 | Msa1425490:intron | 30.0% |
| TCCATCGAATTCTAAACTAG+GGG | - | tig0025858:15161-15180 | Msa1425490:intergenic | 35.0% | |
| CTCCATCGAATTCTAAACTA+GGG | - | tig0025858:15162-15181 | Msa1425490:intergenic | 35.0% | |
| TCTCCATCGAATTCTAAACT+AGG | - | tig0025858:15163-15182 | Msa1425490:intergenic | 35.0% | |
| ! | AGTTTAGAATTCGATGGAGA+TGG | + | tig0025858:15163-15182 | Msa1425490:CDS | 35.0% |
| TTAGTTTCTCATGTTGACCA+AGG | + | tig0025858:15208-15227 | Msa1425490:CDS | 35.0% | |
| ! | CTACATTTTTCTCAGGATCA+AGG | - | tig0025858:15373-15392 | Msa1425490:intergenic | 35.0% |
| AAGATCAAGGTTGTAAATCG+TGG | + | tig0025858:15440-15459 | Msa1425490:intron | 35.0% | |
| !!! | GGTTGTAAATCGTGGTTTTT+TGG | + | tig0025858:15448-15467 | Msa1425490:intron | 35.0% |
| ATCCAATCCAATAGGCATTT+AGG | + | tig0025858:15514-15533 | Msa1425490:intron | 35.0% | |
| TCCAATCCAATAGGCATTTA+GGG | + | tig0025858:15515-15534 | Msa1425490:intron | 35.0% | |
| !! | CTTTAATTTTCTCACGGATC+AGG | - | tig0025858:15572-15591 | Msa1425490:intergenic | 35.0% |
| ! | ACAATTTAAAGCCTCGATCT+TGG | - | tig0025858:15640-15659 | Msa1425490:intergenic | 35.0% |
| GAATCACAACACAATCATGA+TGG | - | tig0025858:15667-15686 | Msa1425490:intergenic | 35.0% | |
| TGTGTTGTGATTCCTCATAT+TGG | + | tig0025858:15674-15693 | Msa1425490:intron | 35.0% | |
| GTGTTGTGATTCCTCATATT+GGG | + | tig0025858:15675-15694 | Msa1425490:intron | 35.0% | |
| ATTGCAATTTGCCCAATATG+AGG | - | tig0025858:15689-15708 | Msa1425490:intergenic | 35.0% | |
| TTGCAATTGTAGTCAAACAG+CGG | - | tig0025858:15726-15745 | Msa1425490:intergenic | 35.0% | |
| !! | ATGGTGAATTTCTAAGACCA+TGG | + | tig0025858:15864-15883 | Msa1425490:intron | 35.0% |
| TCGAAGTTGTGATGTAGTTA+TGG | + | tig0025858:16017-16036 | Msa1425490:intron | 35.0% | |
| !!! | GCAAACTTTTTCTGAAACCT+AGG | + | tig0025858:16080-16099 | Msa1425490:intron | 35.0% |
| TCAACCACATTTAAGTCCAA+CGG | - | tig0025858:16144-16163 | Msa1425490:intergenic | 35.0% | |
| ATTTCGCCTTCATTCTGATT+CGG | + | tig0025858:16165-16184 | Msa1425490:intron | 35.0% | |
| CCACAACATGTTGACAATTA+GGG | - | tig0025858:16514-16533 | Msa1425490:intergenic | 35.0% | |
| TCCACAACATGTTGACAATT+AGG | - | tig0025858:16515-16534 | Msa1425490:intergenic | 35.0% | |
| ATATTGCATTTCTGTGCGTA+AGG | + | tig0025858:16624-16643 | Msa1425490:intron | 35.0% | |
| TGTGCGTAAGGTTTATTTCA+TGG | + | tig0025858:16636-16655 | Msa1425490:intron | 35.0% | |
| TACTCCTAAGACATTGATCA+CGG | + | tig0025858:16822-16841 | Msa1425490:intron | 35.0% | |
| AAACTGTCGTCAAATTTCGT+CGG | + | tig0025858:17285-17304 | Msa1425490:intron | 35.0% | |
| ATATTAAGAGCCATGCTATG+CGG | - | tig0025858:17323-17342 | Msa1425490:intergenic | 35.0% | |
| AATCCTTGTAGATGTGTCTA+AGG | + | tig0025858:17554-17573 | Msa1425490:intron | 35.0% | |
| ATACAACATCCTTCTCTAAC+GGG | + | tig0025858:17920-17939 | Msa1425490:intron | 35.0% | |
| ATTGAATTTCCCGTTAGAGA+AGG | - | tig0025858:17932-17951 | Msa1425490:intergenic | 35.0% | |
| TCTTTCCCTCTTCTTCTAAA+CGG | + | tig0025858:18315-18334 | Msa1425490:intron | 35.0% | |
| TAAGACCGTTTAGAAGAAGA+GGG | - | tig0025858:18323-18342 | Msa1425490:intergenic | 35.0% | |
| ATAAGACCGTTTAGAAGAAG+AGG | - | tig0025858:18324-18343 | Msa1425490:intergenic | 35.0% | |
| CAGTAGACCAAATGAATGAT+AGG | + | tig0025858:18447-18466 | Msa1425490:intron | 35.0% | |
| CTATTGCCCTATCATTCATT+TGG | - | tig0025858:18457-18476 | Msa1425490:intergenic | 35.0% | |
| CAAATGAATGATAGGGCAAT+AGG | + | tig0025858:18455-18474 | Msa1425490:intron | 35.0% | |
| ! | GTGATAAATGCATCGATGAA+AGG | - | tig0025858:18859-18878 | Msa1425490:intergenic | 35.0% |
| TAAAGCTTAGATTATCCACC+TGG | - | tig0025858:18931-18950 | Msa1425490:intergenic | 35.0% | |
| TATAAGCTTTCACTGCTCTA+TGG | - | tig0025858:19056-19075 | Msa1425490:intergenic | 35.0% | |
| GAAAGGCTGCAAAAAGATTA+TGG | + | tig0025858:19179-19198 | Msa1425490:CDS | 35.0% | |
| TATATGTTTCCAGAGAATGG+AGG | + | tig0025858:19207-19226 | Msa1425490:CDS | 35.0% | |
| ! | GAAAAGGTGCAAAAACTAAC+TGG | + | tig0025858:19229-19248 | Msa1425490:CDS | 35.0% |
| GTTATGCATCAGTATCATCT+TGG | + | tig0025858:19252-19271 | Msa1425490:CDS | 35.0% | |
| ACAAAATTGGGACTGATAAG+AGG | - | tig0025858:19444-19463 | Msa1425490:intergenic | 35.0% | |
| TATGGTGAGTTTCTTGTTCT+TGG | - | tig0025858:19470-19489 | Msa1425490:intergenic | 35.0% | |
| AAAGTTCTACCTGAGGAATA+TGG | - | tig0025858:19488-19507 | Msa1425490:intergenic | 35.0% | |
| GAAGTTAAAAGTTCTACCTG+AGG | - | tig0025858:19495-19514 | Msa1425490:intergenic | 35.0% | |
| TATTAGTGGCAGATGATAAC+TGG | - | tig0025858:19547-19566 | Msa1425490:intergenic | 35.0% | |
| ! | GAATAGTTTAGCTTAAGACC+AGG | + | tig0025858:19769-19788 | Msa1425490:intron | 35.0% |
| GAATCATTCCCATTCTGAAT+TGG | - | tig0025858:19826-19845 | Msa1425490:intergenic | 35.0% | |
| TCTTCTAACTGAGGAAGATT+TGG | - | tig0025858:19950-19969 | Msa1425490:intergenic | 35.0% | |
| ATCTTCCTCAGTTAGAAGAA+TGG | + | tig0025858:19951-19970 | Msa1425490:CDS | 35.0% | |
| AGAATGGCTACTTAATAGTC+AGG | + | tig0025858:19967-19986 | Msa1425490:CDS | 35.0% | |
| TGAAATTGAGTTTCTACCGT+CGG | - | tig0025858:20025-20044 | Msa1425490:intergenic | 35.0% | |
| AGTGAATCCAATAGATTCAG+TGG | - | tig0025858:20073-20092 | Msa1425490:intergenic | 35.0% | |
| GAATCTATTGGATTCACTTC+CGG | + | tig0025858:20075-20094 | Msa1425490:CDS | 35.0% | |
| TCGAACCAAGAAAATGTTTC+CGG | - | tig0025858:20097-20116 | Msa1425490:intergenic | 35.0% | |
| TGATCATATGTCGAAAGACT+AGG | - | tig0025858:20181-20200 | Msa1425490:intergenic | 35.0% | |
| CTTTCGACATATGATCATCT+AGG | + | tig0025858:20184-20203 | Msa1425490:CDS | 35.0% | |
| ATGTCTTTCTTTAACTGCTC+TGG | - | tig0025858:20211-20230 | Msa1425490:intergenic | 35.0% | |
| AGAGCAGTTAAAGAAAGACA+TGG | + | tig0025858:20210-20229 | Msa1425490:CDS | 35.0% | |
| ! | CAGTTGACTTAATCGAATGT+CGG | - | tig0025858:20290-20309 | Msa1425490:intergenic | 35.0% |
| ! | TCCCCTAGTTTAGAATTCGA+TGG | + | tig0025858:15157-15176 | Msa1425490:CDS | 40.0% |
| AATTCGATGGAGATGGTTGT+AGG | + | tig0025858:15170-15189 | Msa1425490:CDS | 40.0% | |
| AAATCTGCGTCGTACCTAAT+TGG | - | tig0025858:15396-15415 | Msa1425490:intergenic | 40.0% | |
| GTACGACGCAGATTTAATTG+TGG | + | tig0025858:15401-15420 | Msa1425490:intron | 40.0% | |
| CAATGTGACCTGAAAGATCA+AGG | + | tig0025858:15427-15446 | Msa1425490:intron | 40.0% | |
| !!! | AAATCGTGGTTTTTTGGGGT+TGG | + | tig0025858:15454-15473 | Msa1425490:intron | 40.0% |
| ! | ATTGGATTGGATGACAGACA+GGG | - | tig0025858:15506-15525 | Msa1425490:intergenic | 40.0% |
| ! | TATTGGATTGGATGACAGAC+AGG | - | tig0025858:15507-15526 | Msa1425490:intergenic | 40.0% |
| TGTCTGTCATCCAATCCAAT+AGG | + | tig0025858:15506-15525 | Msa1425490:intron | 40.0% | |
| TCCCTAAATGCCTATTGGAT+TGG | - | tig0025858:15519-15538 | Msa1425490:intergenic | 40.0% | |
| ACACAACTGTGACACAATCA+GGG | - | tig0025858:15543-15562 | Msa1425490:intergenic | 40.0% | |
| AACACAACTGTGACACAATC+AGG | - | tig0025858:15544-15563 | Msa1425490:intergenic | 40.0% | |
| ! | ATTTAAAGCCTCGATCTTGG+TGG | - | tig0025858:15637-15656 | Msa1425490:intergenic | 40.0% |
| TGGGCAAATTGCAATCCATT+AGG | + | tig0025858:15694-15713 | Msa1425490:intron | 40.0% | |
| CTACAATTGCAATCGTGATG+TGG | + | tig0025858:15734-15753 | Msa1425490:intron | 40.0% | |
| TACAAACCTCTGCAAAATGG+AGG | - | tig0025858:15915-15934 | Msa1425490:intergenic | 40.0% | |
| GGTTACAAACCTCTGCAAAA+TGG | - | tig0025858:15918-15937 | Msa1425490:intergenic | 40.0% | |
| GTAACCACATGTAGCTTATG+CGG | + | tig0025858:15932-15951 | Msa1425490:intron | 40.0% | |
| TAACCACATGTAGCTTATGC+GGG | + | tig0025858:15933-15952 | Msa1425490:intron | 40.0% | |
| CTACATCACAACTTCGACTT+GGG | - | tig0025858:16014-16033 | Msa1425490:intergenic | 40.0% | |
| ACTACATCACAACTTCGACT+TGG | - | tig0025858:16015-16034 | Msa1425490:intergenic | 40.0% | |
| CTGAAACCTAGGTATGTTGT+CGG | + | tig0025858:16091-16110 | Msa1425490:intron | 40.0% | |
| TGAAACCTAGGTATGTTGTC+GGG | + | tig0025858:16092-16111 | Msa1425490:intron | 40.0% | |
| GTTTGAATCGTGGATGATGT+GGG | - | tig0025858:16121-16140 | Msa1425490:intergenic | 40.0% | |
| AAACCCGTTGGACTTAAATG+TGG | + | tig0025858:16137-16156 | Msa1425490:intron | 40.0% | |
| CAACCACATTTAAGTCCAAC+GGG | - | tig0025858:16143-16162 | Msa1425490:intergenic | 40.0% | |
| AACCAAATCCCCCAATTAAG+CGG | - | tig0025858:16197-16216 | Msa1425490:intergenic | 40.0% | |
| TTCAAGAACAGTGAACGTGT+TGG | - | tig0025858:16329-16348 | Msa1425490:intergenic | 40.0% | |
| CTTATATATGCAGACCATCG+TGG | + | tig0025858:16396-16415 | Msa1425490:intron | 40.0% | |
| CCCTAATTGTCAACATGTTG+TGG | + | tig0025858:16511-16530 | Msa1425490:CDS | 40.0% | |
| TCTTAGGAGTAAGCACAATG+GGG | - | tig0025858:16813-16832 | Msa1425490:intergenic | 40.0% | |
| GTCTTAGGAGTAAGCACAAT+GGG | - | tig0025858:16814-16833 | Msa1425490:intergenic | 40.0% | |
| TGTCTTAGGAGTAAGCACAA+TGG | - | tig0025858:16815-16834 | Msa1425490:intergenic | 40.0% | |
| ATGACCGTGATCAATGTCTT+AGG | - | tig0025858:16829-16848 | Msa1425490:intergenic | 40.0% | |
| AATCGAAGAAACTCCTCCAT+AGG | + | tig0025858:16854-16873 | Msa1425490:intron | 40.0% | |
| CAGTGTAATTAAGCCTATGG+AGG | - | tig0025858:16870-16889 | Msa1425490:intergenic | 40.0% | |
| GTGCAGTGTAATTAAGCCTA+TGG | - | tig0025858:16873-16892 | Msa1425490:intergenic | 40.0% | |
| TCTCTAAGCTATCCACTCTT+CGG | + | tig0025858:16909-16928 | Msa1425490:intron | 40.0% | |
| TATCCACTCTTCGGTTATTC+TGG | + | tig0025858:16918-16937 | Msa1425490:intron | 40.0% | |
| TTACACTTACCATAGAAGGG+TGG | - | tig0025858:17263-17282 | Msa1425490:intergenic | 40.0% | |
| ACTCCTTAGACACATCTACA+AGG | - | tig0025858:17560-17579 | Msa1425490:intergenic | 40.0% | |
| !! | ATGTGTCTAAGGAGTGTCTA+TGG | + | tig0025858:17565-17584 | Msa1425490:intron | 40.0% |
| TCTAATACGCGTCATACAAG+TGG | + | tig0025858:17631-17650 | Msa1425490:intron | 40.0% | |
| TACAAGTGGCATACTTGAGT+CGG | + | tig0025858:17645-17664 | Msa1425490:intron | 40.0% | |
| !! | GGATCTAAAGAGTGTTGCAA+AGG | + | tig0025858:17666-17685 | Msa1425490:intron | 40.0% |
| TGAATTCAAGTCATGTGTCG+CGG | - | tig0025858:17769-17788 | Msa1425490:intergenic | 40.0% | |
| GCTACAACGTGAAATCTCTA+TGG | - | tig0025858:17795-17814 | Msa1425490:intergenic | 40.0% | |
| ! | ACCACCCATTTGAGATTAGA+CGG | + | tig0025858:17887-17906 | Msa1425490:intron | 40.0% |
| TTAGGGCTCAAGAATGTGAT+TGG | - | tig0025858:18037-18056 | Msa1425490:intergenic | 40.0% | |
| AGAGAGAAGAGAACTCTACT+GGG | - | tig0025858:18100-18119 | Msa1425490:intergenic | 40.0% | |
| AATGATAGGGCAATAGGTAG+AGG | + | tig0025858:18461-18480 | Msa1425490:intron | 40.0% | |
| GTTGTTAGGTAACACAAGAG+TGG | + | tig0025858:18737-18756 | Msa1425490:intron | 40.0% | |
| ! | TTAACACCTTTAGGAAGTCC+AGG | - | tig0025858:18763-18782 | Msa1425490:intergenic | 40.0% |
| !! | TTGCTTGCAAAAGTTGGTGA+AGG | + | tig0025858:18817-18836 | Msa1425490:CDS | 40.0% |
| GCAGTGAAAGCTTATAGTAC+TGG | + | tig0025858:19060-19079 | Msa1425490:CDS | 40.0% | |
| ! | ATAGTACTGGAAGTCGAAAG+CGG | + | tig0025858:19073-19092 | Msa1425490:CDS | 40.0% |
| TGAACTCCGTTCAAGAAGAT+AGG | - | tig0025858:19159-19178 | Msa1425490:intergenic | 40.0% | |
| TTCTTGAACGGAGTTCAGAA+AGG | + | tig0025858:19162-19181 | Msa1425490:CDS | 40.0% | |
| TTTCCAGAGAATGGAGGAAA+AGG | + | tig0025858:19213-19232 | Msa1425490:CDS | 40.0% | |
| GTATCATCTTGGAACAGAAG+AGG | + | tig0025858:19263-19282 | Msa1425490:CDS | 40.0% | |
| AAATTGGGACTGATAAGAGG+AGG | - | tig0025858:19441-19460 | Msa1425490:intergenic | 40.0% | |
| AGAAACTCACCATATTCCTC+AGG | + | tig0025858:19476-19495 | Msa1425490:CDS | 40.0% | |
| ! | GAGGAAGATTTGGTAGAATC+TGG | - | tig0025858:19940-19959 | Msa1425490:intergenic | 40.0% |
| AGTAGCCATTCTTCTAACTG+AGG | - | tig0025858:19959-19978 | Msa1425490:intergenic | 40.0% | |
| AATAGTCAGGATGACTGTGA+AGG | + | tig0025858:19980-19999 | Msa1425490:CDS | 40.0% | |
| ATAGTCAGGATGACTGTGAA+GGG | + | tig0025858:19981-20000 | Msa1425490:CDS | 40.0% | |
| TCCGAAAATTGATCTACCGA+CGG | + | tig0025858:20006-20025 | Msa1425490:CDS | 40.0% | |
| ! | ACCGTCGGTAGATCAATTTT+CGG | - | tig0025858:20010-20029 | Msa1425490:intergenic | 40.0% |
| TGACATGCCACTGAATCTAT+TGG | + | tig0025858:20063-20082 | Msa1425490:CDS | 40.0% | |
| ! | CACTTCCGGAAACATTTTCT+TGG | + | tig0025858:20089-20108 | Msa1425490:CDS | 40.0% |
| ! | TCATTTTCCCTGTGCCTTTT+CGG | - | tig0025858:20142-20161 | Msa1425490:intergenic | 40.0% |
| CGACATTCGATTAAGTCAAC+TGG | + | tig0025858:20288-20307 | Msa1425490:CDS | 40.0% | |
| ! | TGGAAGATCATTGAGAGCAT+TGG | - | tig0025858:20320-20339 | Msa1425490:intergenic | 40.0% |
| CTTATAGGAATTCAGCTCAC+AGG | + | tig0025858:20405-20424 | Msa1425490:intron | 40.0% | |
| AGGGATCCCTAAATGCCTAT+TGG | - | tig0025858:15524-15543 | Msa1425490:intergenic | 45.0% | |
| AAACAGCGGCACATACCTAA+TGG | - | tig0025858:15712-15731 | Msa1425490:intergenic | 45.0% | |
| TTGCAATCGTGATGTGGTCA+AGG | + | tig0025858:15740-15759 | Msa1425490:intron | 45.0% | |
| ACTGCTTCACGATTGTATCG+TGG | + | tig0025858:15784-15803 | Msa1425490:intron | 45.0% | |
| TGCGACTGCTATTGTCGTTA+TGG | + | tig0025858:15845-15864 | Msa1425490:intron | 45.0% | |
| ! | TGAGATCCTCCATTTTGCAG+AGG | + | tig0025858:15906-15925 | Msa1425490:CDS | 45.0% |
| AACCACATGTAGCTTATGCG+GGG | + | tig0025858:15934-15953 | Msa1425490:intron | 45.0% | |
| GCACAATTGCAGTTGCATTG+TGG | + | tig0025858:15956-15975 | Msa1425490:intron | 45.0% | |
| GGTTTGAATCGTGGATGATG+TGG | - | tig0025858:16122-16141 | Msa1425490:intergenic | 45.0% | |
| GAGGTTGCAATGAGCAATGA+AGG | - | tig0025858:16222-16241 | Msa1425490:intergenic | 45.0% | |
| AACGTGTTGGAGGTTGCAAT+GGG | - | tig0025858:16316-16335 | Msa1425490:intergenic | 45.0% | |
| AAGAACAGTGAACGTGTTGG+AGG | - | tig0025858:16326-16345 | Msa1425490:intergenic | 45.0% | |
| TATATGCAGACCATCGTGGT+TGG | + | tig0025858:16400-16419 | Msa1425490:intron | 45.0% | |
| TAGCGGTTGCAAGTGTACTT+TGG | - | tig0025858:16430-16449 | Msa1425490:intergenic | 45.0% | |
| GTACACTTGCAACCGCTATA+AGG | + | tig0025858:16432-16451 | Msa1425490:CDS | 45.0% | |
| TCCAGATGCACACCTTATAG+CGG | - | tig0025858:16447-16466 | Msa1425490:intergenic | 45.0% | |
| GGATAGCTTAGAGAGACAAG+TGG | - | tig0025858:16903-16922 | Msa1425490:intergenic | 45.0% | |
| AGTGCATTTCGTGCTTTCGT+TGG | - | tig0025858:17186-17205 | Msa1425490:intergenic | 45.0% | |
| TTACCATAGAAGGGTGGTGT+GGG | - | tig0025858:17257-17276 | Msa1425490:intergenic | 45.0% | |
| GTTGTTTGTACCGCATAGCA+TGG | + | tig0025858:17310-17329 | Msa1425490:intron | 45.0% | |
| GACACTCGTACGACACATAT+CGG | - | tig0025858:17724-17743 | Msa1425490:intergenic | 45.0% | |
| GATATGTGTCGTACGAGTGT+CGG | + | tig0025858:17723-17742 | Msa1425490:intron | 45.0% | |
| GGCAGTCGAAGTTTCAAACA+CGG | + | tig0025858:17841-17860 | Msa1425490:intron | 45.0% | |
| TGGGCCGTCTAATCTCAAAT+GGG | - | tig0025858:17894-17913 | Msa1425490:intergenic | 45.0% | |
| ATGGGCCGTCTAATCTCAAA+TGG | - | tig0025858:17895-17914 | Msa1425490:intergenic | 45.0% | |
| GAGAGAAGAGAACTCTACTG+GGG | - | tig0025858:18099-18118 | Msa1425490:intergenic | 45.0% | |
| CAGAGAGAAGAGAACTCTAC+TGG | - | tig0025858:18101-18120 | Msa1425490:intergenic | 45.0% | |
| TTCCTGTGTGATTAGGGCTT+TGG | + | tig0025858:18392-18411 | Msa1425490:intron | 45.0% | |
| TGGCACTTGCTTGCAAAAGT+TGG | + | tig0025858:18811-18830 | Msa1425490:CDS | 45.0% | |
| ! | AATGCATCGATGAAAGGGTG+AGG | - | tig0025858:18853-18872 | Msa1425490:intergenic | 45.0% |
| ! | AAGAGTTTGCTTATGTCCGC+TGG | + | tig0025858:19112-19131 | Msa1425490:CDS | 45.0% |
| TTGGAACAGAAGAGGATGAG+AGG | + | tig0025858:19271-19290 | Msa1425490:CDS | 45.0% | |
| TGGAACAGAAGAGGATGAGA+GGG | + | tig0025858:19272-19291 | Msa1425490:CDS | 45.0% | |
| TCAAGATGTTCCTGAAACCG+CGG | + | tig0025858:19362-19381 | Msa1425490:CDS | 45.0% | |
| ATTCGCAATAGTTGCTTCCG+CGG | - | tig0025858:19382-19401 | Msa1425490:intergenic | 45.0% | |
| GGTTCAGTGGTCGCAAAATT+GGG | - | tig0025858:19420-19439 | Msa1425490:intergenic | 45.0% | |
| AGGTTCAGTGGTCGCAAAAT+TGG | - | tig0025858:19421-19440 | Msa1425490:intergenic | 45.0% | |
| ACTGATAAGAGGAGGTTCAG+TGG | - | tig0025858:19433-19452 | Msa1425490:intergenic | 45.0% | |
| TTCAAAGCCAGTCTCCGAAA+AGG | + | tig0025858:20125-20144 | Msa1425490:CDS | 45.0% | |
| CATATGTCGAAAGACTAGGC+TGG | - | tig0025858:20177-20196 | Msa1425490:intergenic | 45.0% | |
| TGCCAAAATCTTGACCACAC+TGG | + | tig0025858:20238-20257 | Msa1425490:CDS | 45.0% | |
| ! | TGCCAGTGTGGTCAAGATTT+TGG | - | tig0025858:20243-20262 | Msa1425490:intergenic | 45.0% |
| ! | TCACAGGAGCTATATCGACT+AGG | + | tig0025858:20421-20440 | Msa1425490:CDS | 45.0% |
| ! | CACAGGAGCTATATCGACTA+GGG | + | tig0025858:20422-20441 | Msa1425490:CDS | 45.0% |
| CGGTTGTGATGCAACCATAG+AGG | + | tig0025858:15311-15330 | Msa1425490:intron | 50.0% | |
| TTGCAGTTGCATTGTGGTCG+TGG | + | tig0025858:15962-15981 | Msa1425490:intron | 50.0% | |
| GGAATCCCGACAACATACCT+AGG | - | tig0025858:16100-16119 | Msa1425490:intergenic | 50.0% | |
| CATCCACGATTCAAACCCGT+TGG | + | tig0025858:16125-16144 | Msa1425490:intron | 50.0% | |
| ! | AGTCCAACGGGTTTGAATCG+TGG | - | tig0025858:16131-16150 | Msa1425490:intergenic | 50.0% |
| CTAGGGCCGAATCAGAATGA+AGG | - | tig0025858:16174-16193 | Msa1425490:intergenic | 50.0% | |
| ATCCCCCAATTAAGCGGCTA+GGG | - | tig0025858:16191-16210 | Msa1425490:intergenic | 50.0% | |
| AATCCCCCAATTAAGCGGCT+AGG | - | tig0025858:16192-16211 | Msa1425490:intergenic | 50.0% | |
| AGCCGCTTAATTGGGGGATT+TGG | + | tig0025858:16192-16211 | Msa1425490:intron | 50.0% | |
| AAGAACAGTGAACGCGTTGG+AGG | - | tig0025858:16241-16260 | Msa1425490:intergenic | 50.0% | |
| TCCAACGCGTTCACTGTTCT+TGG | + | tig0025858:16240-16259 | Msa1425490:intron | 50.0% | |
| CCAACGCGTTCACTGTTCTT+GGG | + | tig0025858:16241-16260 | Msa1425490:intron | 50.0% | |
| TCCCACATCATCCATGCTTC+AGG | + | tig0025858:16265-16284 | Msa1425490:intron | 50.0% | |
| GCCTGAAGCATGGATGATGT+GGG | - | tig0025858:16269-16288 | Msa1425490:intergenic | 50.0% | |
| ATCCATGCTTCAGGCCCATT+GGG | + | tig0025858:16274-16293 | Msa1425490:intron | 50.0% | |
| GAACGTGTTGGAGGTTGCAA+TGG | - | tig0025858:16317-16336 | Msa1425490:intergenic | 50.0% | |
| ACCGCTATAAGGTGTGCATC+TGG | + | tig0025858:16443-16462 | Msa1425490:CDS | 50.0% | |
| TTGACAATTAGGGCACGCTC+TGG | - | tig0025858:16504-16523 | Msa1425490:intergenic | 50.0% | |
| CGACCAGAATAACCGAAGAG+TGG | - | tig0025858:16924-16943 | Msa1425490:intergenic | 50.0% | |
| TCTGGTCGATGACATTCGTC+AGG | + | tig0025858:16936-16955 | Msa1425490:intron | 50.0% | |
| GTCGATGACATTCGTCAGGT+TGG | + | tig0025858:16940-16959 | Msa1425490:intron | 50.0% | |
| TTTCCCACACCACCCTTCTA+TGG | + | tig0025858:17251-17270 | Msa1425490:intron | 50.0% | |
| CTTACCATAGAAGGGTGGTG+TGG | - | tig0025858:17258-17277 | Msa1425490:intergenic | 50.0% | |
| GCCGTCTAATCTCAAATGGG+TGG | - | tig0025858:17891-17910 | Msa1425490:intergenic | 50.0% | |
| TTTCTGTTGGCAAGCAGGCA+AGG | - | tig0025858:18283-18302 | Msa1425490:intergenic | 50.0% | |
| AAGGGTTTCTGTTGGCAAGC+AGG | - | tig0025858:18288-18307 | Msa1425490:intergenic | 50.0% | |
| CTCCAAAGCCCTAATCACAC+AGG | - | tig0025858:18397-18416 | Msa1425490:intergenic | 50.0% | |
| TAGGTAACACAAGAGTGGCC+TGG | + | tig0025858:18742-18761 | Msa1425490:intron | 50.0% | |
| ACTCATCCTCAGCATTTGCC+AGG | + | tig0025858:18910-18929 | Msa1425490:CDS | 50.0% | |
| TATCCACCTGGCAAATGCTG+AGG | - | tig0025858:18919-18938 | Msa1425490:intergenic | 50.0% | |
| CGAAAGCGGCGAAGAATATG+TGG | + | tig0025858:19087-19106 | Msa1425490:CDS | 50.0% | |
| ! | TCTTTCCAGTCTTGTGCCAG+CGG | - | tig0025858:19131-19150 | Msa1425490:intergenic | 50.0% |
| ! | GCACCTTTTCCTCCATTCTC+TGG | - | tig0025858:19219-19238 | Msa1425490:intergenic | 50.0% |
| ACAGAAGAGGATGAGAGGGA+AGG | + | tig0025858:19276-19295 | Msa1425490:CDS | 50.0% | |
| CAGAAGAGGATGAGAGGGAA+GGG | + | tig0025858:19277-19296 | Msa1425490:CDS | 50.0% | |
| CAGCAGCAGCAAGCCATATT+GGG | + | tig0025858:19327-19346 | Msa1425490:CDS | 50.0% | |
| ATAGTTGCTTCCGCGGTTTC+AGG | - | tig0025858:19375-19394 | Msa1425490:intergenic | 50.0% | |
| CAAGCTCTACATTGCCAGTG+TGG | - | tig0025858:20255-20274 | Msa1425490:intergenic | 50.0% | |
| ! | AGGAGCTATATCGACTAGGG+TGG | + | tig0025858:20425-20444 | Msa1425490:CDS | 50.0% |
| GGATGCAACCACCAAGATCG+AGG | + | tig0025858:15626-15645 | Msa1425490:intron | 55.0% | |
| TGCCCCGCATAAGCTACATG+TGG | - | tig0025858:15939-15958 | Msa1425490:intergenic | 55.0% | |
| TTCGGCCCTAGCCGCTTAAT+TGG | + | tig0025858:16183-16202 | Msa1425490:intron | 55.0% | |
| TCGGCCCTAGCCGCTTAATT+GGG | + | tig0025858:16184-16203 | Msa1425490:intron | 55.0% | |
| CCCAAGAACAGTGAACGCGT+TGG | - | tig0025858:16244-16263 | Msa1425490:intergenic | 55.0% | |
| GGCCTGAAGCATGGATGATG+TGG | - | tig0025858:16270-16289 | Msa1425490:intergenic | 55.0% | |
| CATCCATGCTTCAGGCCCAT+TGG | + | tig0025858:16273-16292 | Msa1425490:intron | 55.0% | |
| ATGCAGACCATCGTGGTTGG+TGG | + | tig0025858:16403-16422 | Msa1425490:intron | 55.0% | |
| CTTTGGTCCACCAACCACGA+TGG | - | tig0025858:16413-16432 | Msa1425490:intergenic | 55.0% | |
| CAATTAGGGCACGCTCTGGT+AGG | - | tig0025858:16500-16519 | Msa1425490:intergenic | 55.0% | |
| TGTGTCGCGGTGTCTGACAT+GGG | - | tig0025858:17756-17775 | Msa1425490:intergenic | 55.0% | |
| ATGTGTCGCGGTGTCTGACA+TGG | - | tig0025858:17757-17776 | Msa1425490:intergenic | 55.0% | |
| GAGTGGCCTGGACTTCCTAA+AGG | + | tig0025858:18754-18773 | Msa1425490:CDS | 55.0% | |
| CATCCTCAGCATTTGCCAGG+TGG | + | tig0025858:18913-18932 | Msa1425490:intron | 55.0% | |
| TATGTCCGCTGGCACAAGAC+TGG | + | tig0025858:19123-19142 | Msa1425490:CDS | 55.0% | |
| !! | CCAATATGGCTTGCTGCTGC+TGG | - | tig0025858:19329-19348 | Msa1425490:intergenic | 55.0% |
| CCAGCAGCAGCAAGCCATAT+TGG | + | tig0025858:19326-19345 | Msa1425490:CDS | 55.0% | |
| ! | CCAGTCTCCGAAAAGGCACA+GGG | + | tig0025858:20132-20151 | Msa1425490:CDS | 55.0% |
| CGGCCCTAGCCGCTTAATTG+GGG | + | tig0025858:16185-16204 | Msa1425490:intron | 60.0% | |
| GGCCCTAGCCGCTTAATTGG+GGG | + | tig0025858:16186-16205 | Msa1425490:intron | 60.0% | |
| GCCTCACACTTGGGCCCAAT+GGG | - | tig0025858:16291-16310 | Msa1425490:intergenic | 60.0% | |
| CATTGGGCCCAAGTGTGAGG+CGG | + | tig0025858:16290-16309 | Msa1425490:intron | 60.0% | |
| CAATGGGCCGCCTCACACTT+GGG | - | tig0025858:16300-16319 | Msa1425490:intergenic | 60.0% | |
| ! | GCCAGTCTCCGAAAAGGCAC+AGG | + | tig0025858:20131-20150 | Msa1425490:CDS | 60.0% |
| ! | CCCTGTGCCTTTTCGGAGAC+TGG | - | tig0025858:20135-20154 | Msa1425490:intergenic | 60.0% |
| GGCCCAATGGGCCTGAAGCA+TGG | - | tig0025858:16279-16298 | Msa1425490:intergenic | 65.0% | |
| GCCCATTGGGCCCAAGTGTG+AGG | + | tig0025858:16287-16306 | Msa1425490:intron | 65.0% | |
| CGCCTCACACTTGGGCCCAA+TGG | - | tig0025858:16292-16311 | Msa1425490:intergenic | 65.0% | |
| GCAATGGGCCGCCTCACACT+TGG | - | tig0025858:16301-16320 | Msa1425490:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0025858 | gene | 15112 | 20450 | 15112 | ID=Msa1425490;Name=Msa1425490 |
| tig0025858 | mRNA | 15112 | 20450 | 15112 | ID=Msa1425490-mRNA-1;Parent=Msa1425490;Name=Msa1425490-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|0|0|0.71|1|1|7|0|451 |
| tig0025858 | exon | 15112 | 15229 | 15112 | ID=Msa1425490-mRNA-1:exon:4334;Parent=Msa1425490-mRNA-1 |
| tig0025858 | exon | 15900 | 15927 | 15900 | ID=Msa1425490-mRNA-1:exon:4335;Parent=Msa1425490-mRNA-1 |
| tig0025858 | exon | 16409 | 16544 | 16409 | ID=Msa1425490-mRNA-1:exon:4336;Parent=Msa1425490-mRNA-1 |
| tig0025858 | exon | 18745 | 18931 | 18745 | ID=Msa1425490-mRNA-1:exon:4337;Parent=Msa1425490-mRNA-1 |
| tig0025858 | exon | 19019 | 19497 | 19019 | ID=Msa1425490-mRNA-1:exon:4338;Parent=Msa1425490-mRNA-1 |
| tig0025858 | exon | 19941 | 20309 | 19941 | ID=Msa1425490-mRNA-1:exon:4339;Parent=Msa1425490-mRNA-1 |
| tig0025858 | exon | 20412 | 20450 | 20412 | ID=Msa1425490-mRNA-1:exon:4340;Parent=Msa1425490-mRNA-1 |
| tig0025858 | CDS | 15112 | 15229 | 15112 | ID=Msa1425490-mRNA-1:cds;Parent=Msa1425490-mRNA-1 |
| tig0025858 | CDS | 15900 | 15927 | 15900 | ID=Msa1425490-mRNA-1:cds;Parent=Msa1425490-mRNA-1 |
| tig0025858 | CDS | 16409 | 16544 | 16409 | ID=Msa1425490-mRNA-1:cds;Parent=Msa1425490-mRNA-1 |
| tig0025858 | CDS | 18745 | 18931 | 18745 | ID=Msa1425490-mRNA-1:cds;Parent=Msa1425490-mRNA-1 |
| tig0025858 | CDS | 19019 | 19497 | 19019 | ID=Msa1425490-mRNA-1:cds;Parent=Msa1425490-mRNA-1 |
| tig0025858 | CDS | 19941 | 20309 | 19941 | ID=Msa1425490-mRNA-1:cds;Parent=Msa1425490-mRNA-1 |
| tig0025858 | CDS | 20412 | 20450 | 20412 | ID=Msa1425490-mRNA-1:cds;Parent=Msa1425490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
