AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1429330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1429330 MtrunA17_Chr3g0118361 77.230 426 40 6 13 381 51 476 0.0 642
Msa1429330 MtrunA17_Chr5g0440591 59.050 442 117 12 1 381 36 474 8.20e-171 490
Msa1429330 MtrunA17_Chr2g0329151 45.902 305 98 9 3 241 27 330 1.66e-73 240
Msa1429330 MtrunA17_Chr3g0124291 48.016 252 77 7 11 208 29 280 1.29e-65 214
Msa1429330 MtrunA17_Chr3g0080401 42.739 241 104 6 52 258 10 250 1.01e-59 196
Msa1429330 MtrunA17_Chr8g0382561 44.141 256 88 7 8 208 16 271 6.51e-58 195
Msa1429330 MtrunA17_Chr6g0476301 32.727 330 163 7 53 347 11 316 8.61e-56 187
Msa1429330 MtrunA17_Chr6g0473191 42.735 234 95 5 53 251 11 240 3.77e-55 183
Msa1429330 MtrunA17_Chr6g0476291 42.857 224 93 4 53 241 11 234 6.66e-54 179
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1429330 AT3G20770.1 52.370 443 136 12 1 379 36 467 4.15e-141 415
Msa1429330 AT2G27050.1 51.264 435 135 12 3 369 38 463 6.42e-132 390
Msa1429330 AT1G73730.2 45.364 302 98 7 5 241 17 316 1.54e-72 236
Msa1429330 AT1G73730.1 45.364 302 98 7 5 241 29 328 1.68e-72 236
Msa1429330 AT5G21120.2 35.817 416 160 12 1 343 42 423 4.91e-69 226
Msa1429330 AT5G21120.3 35.817 416 160 12 1 343 35 416 5.34e-69 226
Msa1429330 AT5G21120.1 35.817 416 160 12 1 343 35 416 5.34e-69 226
Msa1429330 AT5G65100.1 33.886 422 181 14 9 339 33 447 4.14e-60 204
Msa1429330 AT5G10120.1 40.000 265 95 6 5 208 14 275 7.62e-56 190

Find 136 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTACAAGCTTGCGAATTT+TGG 0.116142 tig0026478:+63876 None:intergenic
GATCTTTCGGTAAACCAATT+TGG 0.148232 tig0026478:+63995 None:intergenic
GGGTCTTCTTCATCTGATTT+TGG 0.218356 tig0026478:-63376 Msa1429330:CDS
ATCTTTCGGTAAACCAATTT+GGG 0.228960 tig0026478:+63996 None:intergenic
CCAAGCAGACAATGCAATTC+CGG 0.279173 tig0026478:-64201 Msa1429330:CDS
CCGATGTGAGCTTGGCTATA+AGG 0.303939 tig0026478:+63451 None:intergenic
AATGGCTCAGCCGGTTAATA+TGG 0.309330 tig0026478:-63284 Msa1429330:CDS
GGTCACAGGCTTTCCTTTCT+CGG 0.320948 tig0026478:+64303 None:intergenic
GTCTGCTTGGTACTTGGATA+TGG 0.322770 tig0026478:+64214 None:intergenic
ACCGGCTGAGCCATTGGTTT+CGG 0.323642 tig0026478:+63292 None:intergenic
GGTGCTTCTCAAGCGATTAA+AGG 0.326570 tig0026478:-64488 Msa1429330:CDS
CGTTCCTCCACATCAAAATT+CGG 0.328270 tig0026478:+63670 None:intergenic
CCAAAATTCGCAAGCTTGTA+AGG 0.334057 tig0026478:-63876 Msa1429330:CDS
GGCGGAGGACCTTGATCTTT+CGG 0.355023 tig0026478:+63982 None:intergenic
CCTCCTCCATGGTGGCCTAC+AGG 0.364645 tig0026478:-64036 Msa1429330:CDS
TGCATTGTCTGCTTGGTACT+TGG 0.367926 tig0026478:+64208 None:intergenic
GATGAAGAAGACCCTCTATA+TGG 0.368108 tig0026478:+63385 None:intergenic
TTGATTAACGATTGCAAGCC+AGG 0.377242 tig0026478:+63807 None:intergenic
AAAGGTCCAGCTGCGACAAA+TGG 0.377442 tig0026478:+63742 None:intergenic
CCGGAATTGCATTGTCTGCT+TGG 0.381090 tig0026478:+64201 None:intergenic
GTCACAGGCTTTCCTTTCTC+GGG 0.386577 tig0026478:+64304 None:intergenic
GAGGAGTGGTGGCCCCAAAT+TGG 0.394929 tig0026478:-64009 Msa1429330:CDS
TTCTTCATCAATCCAACATT+GGG 0.399620 tig0026478:-63633 Msa1429330:CDS
GAGGAGGATGTGGAGGGATA+AGG 0.401050 tig0026478:-64509 Msa1429330:CDS
AGATCATGAGGTTTCTTGTA+AGG 0.405253 tig0026478:+63961 None:intergenic
ATTGCGAAAGTCTGCTGAAA+TGG 0.405530 tig0026478:+63580 None:intergenic
TTTCCTCCTTGCCTGTTCCT+GGG 0.410461 tig0026478:+64418 None:intergenic
ATCTCATTAGCATGAAAACT+TGG 0.413498 tig0026478:+63349 None:intergenic
GCAGAGGCAATCCCAGGAAC+AGG 0.414485 tig0026478:-64429 Msa1429330:intron
AAGGTCCAGCTGCGACAAAT+GGG 0.416033 tig0026478:+63743 None:intergenic
CAAGCAGACAATGCAATTCC+GGG 0.417322 tig0026478:-64200 Msa1429330:CDS
TTTGTCGCAGCTGGACCTTT+CGG 0.419285 tig0026478:-63739 Msa1429330:CDS
GTTCCTGGGATTGCCTCTGC+TGG 0.422464 tig0026478:+64432 None:intergenic
GCCGCATCGGATCCTTCCTT+CGG 0.422926 tig0026478:+64454 None:intergenic
ATTGCCTCTGCTGGCCGCAT+CGG 0.424331 tig0026478:+64441 None:intergenic
GATTGATGAAGAAGATTCTC+AGG 0.425025 tig0026478:+63643 None:intergenic
TCAATCCAACATTGGGATGA+TGG 0.429901 tig0026478:-63626 Msa1429330:CDS
CCCTCAGAGGCGGTTTCCAT+TGG 0.434105 tig0026478:-64070 Msa1429330:intron
CTCCTCCATGGTGGCCTACA+GGG 0.453443 tig0026478:-64035 Msa1429330:CDS
GTGAGGAAGCGGAAGATCTC+TGG 0.455579 tig0026478:-63526 Msa1429330:CDS
GAATGGTGGAAGGATAAGTT+AGG 0.456338 tig0026478:-64259 Msa1429330:CDS
CTTCTTCATCAATCCAACAT+TGG 0.463424 tig0026478:-63634 Msa1429330:CDS
GGAGGTGGAACCATATTAAC+CGG 0.465324 tig0026478:+63274 None:intergenic
CGGCCAGCAGAGGCAATCCC+AGG 0.467431 tig0026478:-64435 Msa1429330:CDS
TCAGCAGACTTTCGCAATGA+AGG 0.468808 tig0026478:-63575 Msa1429330:CDS
CAATTGAGTTGTCCATATAG+AGG 0.471657 tig0026478:-63397 Msa1429330:CDS
TACGGGATCATTCCCGAGAA+AGG 0.475737 tig0026478:-64316 Msa1429330:CDS
GAGAAAGGAAAGCCTGTGAC+CGG 0.478282 tig0026478:-64301 Msa1429330:CDS
ATATTAACCGGCTGAGCCAT+TGG 0.478420 tig0026478:+63286 None:intergenic
GTATCCCTAGAAGCCCTGTC+TGG 0.478900 tig0026478:+63424 None:intergenic
ACTTATCCTTCCACCATTCG+CGG 0.480734 tig0026478:+64263 None:intergenic
ATTGGTTTACCGAAAGATCA+AGG 0.487239 tig0026478:-63991 Msa1429330:CDS
TCCTTCCCTGTAGGCCACCA+TGG 0.488917 tig0026478:+64030 None:intergenic
CTCTGGTGAATTTAACATGA+TGG 0.489439 tig0026478:-63509 Msa1429330:CDS
CATGCCTTCTTCAGATCATG+AGG 0.490321 tig0026478:+63949 None:intergenic
CCGAGCTTGAGAGGAGGATG+TGG 0.496132 tig0026478:-64519 Msa1429330:CDS
GCAATTCCGGGGAAGAATGA+TGG 0.501691 tig0026478:-64188 Msa1429330:CDS
CGGATAATCTCCGCGAATGG+TGG 0.504192 tig0026478:-64273 Msa1429330:CDS
ACCGAAACCAATGGCTCAGC+CGG 0.505945 tig0026478:-63293 Msa1429330:CDS
CTGAAGAAGGCATGGAAGGT+TGG 0.507865 tig0026478:-63940 Msa1429330:CDS
TTATCCGATGCCCCGGTCAC+AGG 0.510724 tig0026478:+64289 None:intergenic
TCTCTCCATCATCCCAATGT+TGG 0.511441 tig0026478:+63621 None:intergenic
AGAAGGGTGTTCCTCCTCCA+TGG 0.516637 tig0026478:-64047 Msa1429330:CDS
ATGGAGGTTTGCAAGGCTCA+AGG 0.517295 tig0026478:-64347 Msa1429330:intron
GGAAGAGGCTGTGACCAACT+TGG 0.519473 tig0026478:-63554 Msa1429330:CDS
AGGATAAAGCTCCCGCGCTA+AGG 0.520455 tig0026478:+63777 None:intergenic
ACTTGGATTTCGTGAGGAAG+CGG 0.521923 tig0026478:-63537 Msa1429330:CDS
GGACCTTTCGGCATCAATGA+AGG 0.525234 tig0026478:-63727 Msa1429330:CDS
AAAGCCTGTGACCGGGGCAT+CGG 0.525234 tig0026478:-64293 Msa1429330:CDS
AGAAAGGAAAGCCTGTGACC+GGG 0.526532 tig0026478:-64300 Msa1429330:CDS
GGCCTACAGGGAAGGAGGAG+TGG 0.527829 tig0026478:-64023 Msa1429330:CDS
GAGGCGGTTTCCATTGGAGA+AGG 0.533081 tig0026478:-64064 Msa1429330:CDS
CTGGAAAACCGATGTGAGCT+TGG 0.533885 tig0026478:+63443 None:intergenic
CGGCTAAGGAAAGTGCAACC+TGG 0.537233 tig0026478:-63825 Msa1429330:CDS
TCAAGATAAAATGACGGCTA+AGG 0.537615 tig0026478:-63839 Msa1429330:CDS
TGAGGTTTCTTGTAAGGCGG+AGG 0.540347 tig0026478:+63967 None:intergenic
TGGTACTTGGATATGGCAGC+AGG 0.543745 tig0026478:+64221 None:intergenic
GAAAGGAAAGCCTGTGACCG+GGG 0.544653 tig0026478:-64299 Msa1429330:CDS
GACTTTCGCAATGAAGGAAG+AGG 0.546905 tig0026478:-63569 Msa1429330:CDS
TTGCCTCCATCATTCTTCCC+CGG 0.547718 tig0026478:+64182 None:intergenic
CTCATGATCTGAAGAAGGCA+TGG 0.547916 tig0026478:-63948 Msa1429330:CDS
TTGATGTTGCCGAGCTTGAG+AGG 0.548157 tig0026478:-64528 Msa1429330:CDS
GCAATGAGTATGATGTCGAT+GGG 0.548446 tig0026478:-63705 Msa1429330:CDS
GAAACCTCATGATCTGAAGA+AGG 0.550430 tig0026478:-63953 Msa1429330:CDS
TAATCTCCGCGAATGGTGGA+AGG 0.556888 tig0026478:-64269 Msa1429330:CDS
TCCAGTTATATCGATGGAGG+TGG 0.557885 tig0026478:+63259 None:intergenic
GGATCCGATGCGGCCAGCAG+AGG 0.560694 tig0026478:-64445 Msa1429330:CDS
AGCTTGAGAGGAGGATGTGG+AGG 0.561978 tig0026478:-64516 Msa1429330:CDS
CACCACTCCTCCTTCCCTGT+AGG 0.563392 tig0026478:+64021 None:intergenic
CCTGTAGGCCACCATGGAGG+AGG 0.564770 tig0026478:+64036 None:intergenic
TGGAGGTTTGCAAGGCTCAA+GGG 0.571141 tig0026478:-64346 Msa1429330:intron
TCCAAGTCCAGTTATATCGA+TGG 0.571721 tig0026478:+63253 None:intergenic
TGATCTGAAGAAGGCATGGA+AGG 0.572466 tig0026478:-63944 Msa1429330:CDS
CTACAGGGAAGGAGGAGTGG+TGG 0.573928 tig0026478:-64020 Msa1429330:CDS
GGTCCAGCTGCGACAAATGG+GGG 0.576693 tig0026478:+63745 None:intergenic
GGAGGAACACCCTTCTCCAA+TGG 0.579400 tig0026478:+64054 None:intergenic
AGGTCCAGCTGCGACAAATG+GGG 0.579864 tig0026478:+63744 None:intergenic
TCCATGGTGGCCTACAGGGA+AGG 0.582532 tig0026478:-64031 Msa1429330:CDS
CTTCCTCACGAAATCCAAGT+TGG 0.583208 tig0026478:+63540 None:intergenic
AATGATGGAGGCAATCCGAT+TGG 0.584431 tig0026478:-64173 Msa1429330:intron
TCAAGAGGAGGCCTTAGCGC+GGG 0.589414 tig0026478:-63788 Msa1429330:CDS
AATTGAGTTGTCCATATAGA+GGG 0.591180 tig0026478:-63396 Msa1429330:CDS
TTGCCTTCATTGATGCCGAA+AGG 0.600278 tig0026478:+63724 None:intergenic
GAGCAAGTCAAACCGAAGGA+AGG 0.602432 tig0026478:-64466 Msa1429330:CDS
TAAGTTAGGTTTGACCGCAA+CGG 0.602662 tig0026478:-64245 Msa1429330:CDS
AATGACTGAGGATATATGAC+TGG 0.604420 tig0026478:+63322 None:intergenic
CCACATCCTCCTCTCAAGCT+CGG 0.615219 tig0026478:+64519 None:intergenic
GGCAATGAGTATGATGTCGA+TGG 0.618237 tig0026478:-63706 Msa1429330:CDS
AGGCGGTTTCCATTGGAGAA+GGG 0.619284 tig0026478:-64063 Msa1429330:CDS
CATCGGATAATCTCCGCGAA+TGG 0.620613 tig0026478:-64276 Msa1429330:CDS
TCTTTCGGTAAACCAATTTG+GGG 0.621082 tig0026478:+63997 None:intergenic
ATGGTGGCCTACAGGGAAGG+AGG 0.622832 tig0026478:-64028 Msa1429330:CDS
GCTTGCAATCGTTAATCAAG+AGG 0.626115 tig0026478:-63803 Msa1429330:CDS
GCGGAGATTATCCGATGCCC+CGG 0.628966 tig0026478:+64282 None:intergenic
TCATGAGGTTTCTTGTAAGG+CGG 0.630329 tig0026478:+63964 None:intergenic
ATCAAGAGGAGGCCTTAGCG+CGG 0.637665 tig0026478:-63789 Msa1429330:CDS
GCTTGAGAGGAGGATGTGGA+GGG 0.637705 tig0026478:-64515 Msa1429330:CDS
TGACCAACTTGGATTTCGTG+AGG 0.639847 tig0026478:-63543 Msa1429330:CDS
CCTTATAGCCAAGCTCACAT+CGG 0.641231 tig0026478:-63451 Msa1429330:CDS
ATTCGTTCAACCGAAACCAA+TGG 0.641894 tig0026478:-63302 Msa1429330:CDS
TGCAATCGTTAATCAAGAGG+AGG 0.642676 tig0026478:-63800 Msa1429330:CDS
ATGCCTTCAAGATAAAATGA+CGG 0.643938 tig0026478:-63845 Msa1429330:CDS
AAAGGAGCAAGTCAAACCGA+AGG 0.648111 tig0026478:-64470 Msa1429330:CDS
ATATGGCAGCAGGACCGTTG+CGG 0.650469 tig0026478:+64231 None:intergenic
TATAAGGACATGTTGAGTGT+TGG 0.651109 tig0026478:+63467 None:intergenic
AGGGTGTTCCTCCTCCATGG+TGG 0.653236 tig0026478:-64044 Msa1429330:CDS
TTCGGTTGAACGAATGACTG+AGG 0.658942 tig0026478:+63310 None:intergenic
GTCCAGCTGCGACAAATGGG+GGG 0.662952 tig0026478:+63746 None:intergenic
AAGTCCAGTTATATCGATGG+AGG 0.668579 tig0026478:+63256 None:intergenic
CAATGAGTATGATGTCGATG+GGG 0.670997 tig0026478:-63704 Msa1429330:CDS
AATGAGTATGATGTCGATGG+GGG 0.671000 tig0026478:-63703 Msa1429330:CDS
TTCCCTGTAGGCCACCATGG+AGG 0.671351 tig0026478:+64033 None:intergenic
ATGTTGCCGAGCTTGAGAGG+AGG 0.673867 tig0026478:-64525 Msa1429330:CDS
ATTCCGGGGAAGAATGATGG+AGG 0.679869 tig0026478:-64185 Msa1429330:CDS
AAGCAGACAATGCAATTCCG+GGG 0.691771 tig0026478:-64199 Msa1429330:CDS
ACCGAAGGAAGGATCCGATG+CGG 0.718950 tig0026478:-64455 Msa1429330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
ATCTTTCGGTAAACCAATTT+GGG + tig0026478:63830-63849 None:intergenic 30.0%
!!! CATTTTATCTTGAAGGCATT+TGG + tig0026478:63977-63996 None:intergenic 30.0%
ATGCCTTCAAGATAAAATGA+CGG - tig0026478:63978-63997 Msa1429330:CDS 30.0%
TTCTTCATCAATCCAACATT+GGG - tig0026478:64190-64209 Msa1429330:CDS 30.0%
! TGTTGGCAAGTGAAAATTTT+AGG + tig0026478:64342-64361 None:intergenic 30.0%
! AATTGAGTTGTCCATATAGA+GGG - tig0026478:64427-64446 Msa1429330:intron 30.0%
ATCTCATTAGCATGAAAACT+TGG + tig0026478:64477-64496 None:intergenic 30.0%
ATCTTTCGGTAAACCAATTT+GGG + tig0026478:63830-63849 None:intergenic 30.0%
!!! CATTTTATCTTGAAGGCATT+TGG + tig0026478:63977-63996 None:intergenic 30.0%
ATGCCTTCAAGATAAAATGA+CGG - tig0026478:63978-63997 Msa1429330:CDS 30.0%
TTCTTCATCAATCCAACATT+GGG - tig0026478:64190-64209 Msa1429330:CDS 30.0%
! TGTTGGCAAGTGAAAATTTT+AGG + tig0026478:64342-64361 None:intergenic 30.0%
! AATTGAGTTGTCCATATAGA+GGG - tig0026478:64427-64446 Msa1429330:intron 30.0%
ATCTCATTAGCATGAAAACT+TGG + tig0026478:64477-64496 None:intergenic 30.0%
AAGGAGGAAAAAGATGTCAA+GGG - tig0026478:63418-63437 Msa1429330:CDS 35.0%
GAAGTACATGCTGAAAATGA+TGG - tig0026478:63457-63476 Msa1429330:CDS 35.0%
TCTTTCGGTAAACCAATTTG+GGG + tig0026478:63829-63848 None:intergenic 35.0%
GATCTTTCGGTAAACCAATT+TGG + tig0026478:63831-63850 None:intergenic 35.0%
! ATTGGTTTACCGAAAGATCA+AGG - tig0026478:63832-63851 Msa1429330:CDS 35.0%
AGATCATGAGGTTTCTTGTA+AGG + tig0026478:63865-63884 None:intergenic 35.0%
!! TAGCCGTCATTTTATCTTGA+AGG + tig0026478:63984-64003 None:intergenic 35.0%
TCAAGATAAAATGACGGCTA+AGG - tig0026478:63984-64003 Msa1429330:CDS 35.0%
GATTGATGAAGAAGATTCTC+AGG + tig0026478:64183-64202 None:intergenic 35.0%
CTTCTTCATCAATCCAACAT+TGG - tig0026478:64189-64208 Msa1429330:CDS 35.0%
CTCTGGTGAATTTAACATGA+TGG - tig0026478:64314-64333 Msa1429330:CDS 35.0%
TATAAGGACATGTTGAGTGT+TGG + tig0026478:64359-64378 None:intergenic 35.0%
! CAATTGAGTTGTCCATATAG+AGG - tig0026478:64426-64445 Msa1429330:intron 35.0%
! TCTTCTTCATCTGATTTTGG+TGG - tig0026478:64450-64469 Msa1429330:CDS 35.0%
AATGACTGAGGATATATGAC+TGG + tig0026478:64504-64523 None:intergenic 35.0%
AAGGAGGAAAAAGATGTCAA+GGG - tig0026478:63418-63437 Msa1429330:CDS 35.0%
GAAGTACATGCTGAAAATGA+TGG - tig0026478:63457-63476 Msa1429330:CDS 35.0%
TCTTTCGGTAAACCAATTTG+GGG + tig0026478:63829-63848 None:intergenic 35.0%
GATCTTTCGGTAAACCAATT+TGG + tig0026478:63831-63850 None:intergenic 35.0%
! ATTGGTTTACCGAAAGATCA+AGG - tig0026478:63832-63851 Msa1429330:CDS 35.0%
AGATCATGAGGTTTCTTGTA+AGG + tig0026478:63865-63884 None:intergenic 35.0%
!! TAGCCGTCATTTTATCTTGA+AGG + tig0026478:63984-64003 None:intergenic 35.0%
TCAAGATAAAATGACGGCTA+AGG - tig0026478:63984-64003 Msa1429330:CDS 35.0%
GATTGATGAAGAAGATTCTC+AGG + tig0026478:64183-64202 None:intergenic 35.0%
CTTCTTCATCAATCCAACAT+TGG - tig0026478:64189-64208 Msa1429330:CDS 35.0%
CTCTGGTGAATTTAACATGA+TGG - tig0026478:64314-64333 Msa1429330:CDS 35.0%
TATAAGGACATGTTGAGTGT+TGG + tig0026478:64359-64378 None:intergenic 35.0%
! CAATTGAGTTGTCCATATAG+AGG - tig0026478:64426-64445 Msa1429330:intron 35.0%
! TCTTCTTCATCTGATTTTGG+TGG - tig0026478:64450-64469 Msa1429330:CDS 35.0%
AATGACTGAGGATATATGAC+TGG + tig0026478:64504-64523 None:intergenic 35.0%
CAAGGAGGAAAAAGATGTCA+AGG - tig0026478:63417-63436 Msa1429330:CDS 40.0%
GTACATGCTGAAAATGATGG+AGG - tig0026478:63460-63479 Msa1429330:CDS 40.0%
! GAAAATGATGGAGGTTTGCA+AGG - tig0026478:63469-63488 Msa1429330:CDS 40.0%
! AGGCTCAAGGGTTTTTGTTA+CGG - tig0026478:63489-63508 Msa1429330:CDS 40.0%
! GAATGGTGGAAGGATAAGTT+AGG - tig0026478:63564-63583 Msa1429330:CDS 40.0%
TAAGTTAGGTTTGACCGCAA+CGG - tig0026478:63578-63597 Msa1429330:CDS 40.0%
TCATGAGGTTTCTTGTAAGG+CGG + tig0026478:63862-63881 None:intergenic 40.0%
GAAACCTCATGATCTGAAGA+AGG - tig0026478:63870-63889 Msa1429330:CDS 40.0%
!! TTGCGAATTTTGGCAATGTC+GGG + tig0026478:63940-63959 None:intergenic 40.0%
!! CTTGCGAATTTTGGCAATGT+CGG + tig0026478:63941-63960 None:intergenic 40.0%
! CCTTACAAGCTTGCGAATTT+TGG + tig0026478:63950-63969 None:intergenic 40.0%
CCAAAATTCGCAAGCTTGTA+AGG - tig0026478:63947-63966 Msa1429330:CDS 40.0%
TTGATTAACGATTGCAAGCC+AGG + tig0026478:64019-64038 None:intergenic 40.0%
GCTTGCAATCGTTAATCAAG+AGG - tig0026478:64020-64039 Msa1429330:CDS 40.0%
TGCAATCGTTAATCAAGAGG+AGG - tig0026478:64023-64042 Msa1429330:CDS 40.0%
ACAAATGGGGGGATATAATC+AGG + tig0026478:64069-64088 None:intergenic 40.0%
GCAATGAGTATGATGTCGAT+GGG - tig0026478:64118-64137 Msa1429330:intron 40.0%
CAATGAGTATGATGTCGATG+GGG - tig0026478:64119-64138 Msa1429330:intron 40.0%
AATGAGTATGATGTCGATGG+GGG - tig0026478:64120-64139 Msa1429330:intron 40.0%
CGTTCCTCCACATCAAAATT+CGG + tig0026478:64156-64175 None:intergenic 40.0%
!! CGAATTTTGATGTGGAGGAA+CGG - tig0026478:64154-64173 Msa1429330:intron 40.0%
TCAATCCAACATTGGGATGA+TGG - tig0026478:64197-64216 Msa1429330:CDS 40.0%
ATTGCGAAAGTCTGCTGAAA+TGG + tig0026478:64246-64265 None:intergenic 40.0%
GATGAAGAAGACCCTCTATA+TGG + tig0026478:64441-64460 None:intergenic 40.0%
! GGGTCTTCTTCATCTGATTT+TGG - tig0026478:64447-64466 Msa1429330:CDS 40.0%
ATTCGTTCAACCGAAACCAA+TGG - tig0026478:64521-64540 Msa1429330:CDS 40.0%
CAAGGAGGAAAAAGATGTCA+AGG - tig0026478:63417-63436 Msa1429330:CDS 40.0%
GTACATGCTGAAAATGATGG+AGG - tig0026478:63460-63479 Msa1429330:CDS 40.0%
! GAAAATGATGGAGGTTTGCA+AGG - tig0026478:63469-63488 Msa1429330:CDS 40.0%
! AGGCTCAAGGGTTTTTGTTA+CGG - tig0026478:63489-63508 Msa1429330:CDS 40.0%
! GAATGGTGGAAGGATAAGTT+AGG - tig0026478:63564-63583 Msa1429330:CDS 40.0%
TAAGTTAGGTTTGACCGCAA+CGG - tig0026478:63578-63597 Msa1429330:CDS 40.0%
TCATGAGGTTTCTTGTAAGG+CGG + tig0026478:63862-63881 None:intergenic 40.0%
GAAACCTCATGATCTGAAGA+AGG - tig0026478:63870-63889 Msa1429330:CDS 40.0%
!! TTGCGAATTTTGGCAATGTC+GGG + tig0026478:63940-63959 None:intergenic 40.0%
!! CTTGCGAATTTTGGCAATGT+CGG + tig0026478:63941-63960 None:intergenic 40.0%
! CCTTACAAGCTTGCGAATTT+TGG + tig0026478:63950-63969 None:intergenic 40.0%
CCAAAATTCGCAAGCTTGTA+AGG - tig0026478:63947-63966 Msa1429330:CDS 40.0%
TTGATTAACGATTGCAAGCC+AGG + tig0026478:64019-64038 None:intergenic 40.0%
GCTTGCAATCGTTAATCAAG+AGG - tig0026478:64020-64039 Msa1429330:CDS 40.0%
TGCAATCGTTAATCAAGAGG+AGG - tig0026478:64023-64042 Msa1429330:CDS 40.0%
ACAAATGGGGGGATATAATC+AGG + tig0026478:64069-64088 None:intergenic 40.0%
GCAATGAGTATGATGTCGAT+GGG - tig0026478:64118-64137 Msa1429330:intron 40.0%
CAATGAGTATGATGTCGATG+GGG - tig0026478:64119-64138 Msa1429330:intron 40.0%
AATGAGTATGATGTCGATGG+GGG - tig0026478:64120-64139 Msa1429330:intron 40.0%
CGTTCCTCCACATCAAAATT+CGG + tig0026478:64156-64175 None:intergenic 40.0%
!! CGAATTTTGATGTGGAGGAA+CGG - tig0026478:64154-64173 Msa1429330:intron 40.0%
TCAATCCAACATTGGGATGA+TGG - tig0026478:64197-64216 Msa1429330:CDS 40.0%
ATTGCGAAAGTCTGCTGAAA+TGG + tig0026478:64246-64265 None:intergenic 40.0%
GATGAAGAAGACCCTCTATA+TGG + tig0026478:64441-64460 None:intergenic 40.0%
! GGGTCTTCTTCATCTGATTT+TGG - tig0026478:64447-64466 Msa1429330:CDS 40.0%
ATTCGTTCAACCGAAACCAA+TGG - tig0026478:64521-64540 Msa1429330:CDS 40.0%
GGTGCTTCTCAAGCGATTAA+AGG - tig0026478:63335-63354 Msa1429330:CDS 45.0%
AAAGGAGCAAGTCAAACCGA+AGG - tig0026478:63353-63372 Msa1429330:CDS 45.0%
AAGATGTCAAGGGCTCAAGA+TGG - tig0026478:63428-63447 Msa1429330:CDS 45.0%
! GGCTCAAGGGTTTTTGTTAC+GGG - tig0026478:63490-63509 Msa1429330:CDS 45.0%
ACTTATCCTTCCACCATTCG+CGG + tig0026478:63563-63582 None:intergenic 45.0%
GTCTGCTTGGTACTTGGATA+TGG + tig0026478:63612-63631 None:intergenic 45.0%
TGCATTGTCTGCTTGGTACT+TGG + tig0026478:63618-63637 None:intergenic 45.0%
CCAAGCAGACAATGCAATTC+CGG - tig0026478:63622-63641 Msa1429330:CDS 45.0%
CAAGCAGACAATGCAATTCC+GGG - tig0026478:63623-63642 Msa1429330:CDS 45.0%
AAGCAGACAATGCAATTCCG+GGG - tig0026478:63624-63643 Msa1429330:CDS 45.0%
! AATGATGGAGGCAATCCGAT+TGG - tig0026478:63650-63669 Msa1429330:CDS 45.0%
TGCAGATAAGAGAGAACCCA+AGG + tig0026478:63714-63733 None:intergenic 45.0%
CATGCCTTCTTCAGATCATG+AGG + tig0026478:63877-63896 None:intergenic 45.0%
CTCATGATCTGAAGAAGGCA+TGG - tig0026478:63875-63894 Msa1429330:CDS 45.0%
! TGATCTGAAGAAGGCATGGA+AGG - tig0026478:63879-63898 Msa1429330:CDS 45.0%
TTGCCTTCATTGATGCCGAA+AGG + tig0026478:64102-64121 None:intergenic 45.0%
GGCAATGAGTATGATGTCGA+TGG - tig0026478:64117-64136 Msa1429330:intron 45.0%
!! AGAGGAGCCGAATTTTGATG+TGG - tig0026478:64146-64165 Msa1429330:intron 45.0%
TCTCTCCATCATCCCAATGT+TGG + tig0026478:64205-64224 None:intergenic 45.0%
TCAGCAGACTTTCGCAATGA+AGG - tig0026478:64248-64267 Msa1429330:CDS 45.0%
GACTTTCGCAATGAAGGAAG+AGG - tig0026478:64254-64273 Msa1429330:CDS 45.0%
TGACCAACTTGGATTTCGTG+AGG - tig0026478:64280-64299 Msa1429330:CDS 45.0%
CTTCCTCACGAAATCCAAGT+TGG + tig0026478:64286-64305 None:intergenic 45.0%
ACTTGGATTTCGTGAGGAAG+CGG - tig0026478:64286-64305 Msa1429330:CDS 45.0%
CCTTATAGCCAAGCTCACAT+CGG - tig0026478:64372-64391 Msa1429330:intron 45.0%
!!! TCACATCGGTTTTCCAGACA+GGG - tig0026478:64386-64405 Msa1429330:intron 45.0%
! TTTTCCAGACAGGGCTTCTA+GGG - tig0026478:64395-64414 Msa1429330:intron 45.0%
TTCGGTTGAACGAATGACTG+AGG + tig0026478:64516-64535 None:intergenic 45.0%
ATATTAACCGGCTGAGCCAT+TGG + tig0026478:64540-64559 None:intergenic 45.0%
AATGGCTCAGCCGGTTAATA+TGG - tig0026478:64539-64558 Msa1429330:CDS 45.0%
GGAGGTGGAACCATATTAAC+CGG + tig0026478:64552-64571 None:intergenic 45.0%
GGTGCTTCTCAAGCGATTAA+AGG - tig0026478:63335-63354 Msa1429330:CDS 45.0%
AAAGGAGCAAGTCAAACCGA+AGG - tig0026478:63353-63372 Msa1429330:CDS 45.0%
AAGATGTCAAGGGCTCAAGA+TGG - tig0026478:63428-63447 Msa1429330:CDS 45.0%
! GGCTCAAGGGTTTTTGTTAC+GGG - tig0026478:63490-63509 Msa1429330:CDS 45.0%
ACTTATCCTTCCACCATTCG+CGG + tig0026478:63563-63582 None:intergenic 45.0%
GTCTGCTTGGTACTTGGATA+TGG + tig0026478:63612-63631 None:intergenic 45.0%
TGCATTGTCTGCTTGGTACT+TGG + tig0026478:63618-63637 None:intergenic 45.0%
CCAAGCAGACAATGCAATTC+CGG - tig0026478:63622-63641 Msa1429330:CDS 45.0%
CAAGCAGACAATGCAATTCC+GGG - tig0026478:63623-63642 Msa1429330:CDS 45.0%
AAGCAGACAATGCAATTCCG+GGG - tig0026478:63624-63643 Msa1429330:CDS 45.0%
! AATGATGGAGGCAATCCGAT+TGG - tig0026478:63650-63669 Msa1429330:CDS 45.0%
TGCAGATAAGAGAGAACCCA+AGG + tig0026478:63714-63733 None:intergenic 45.0%
CATGCCTTCTTCAGATCATG+AGG + tig0026478:63877-63896 None:intergenic 45.0%
CTCATGATCTGAAGAAGGCA+TGG - tig0026478:63875-63894 Msa1429330:CDS 45.0%
! TGATCTGAAGAAGGCATGGA+AGG - tig0026478:63879-63898 Msa1429330:CDS 45.0%
TTGCCTTCATTGATGCCGAA+AGG + tig0026478:64102-64121 None:intergenic 45.0%
GGCAATGAGTATGATGTCGA+TGG - tig0026478:64117-64136 Msa1429330:intron 45.0%
!! AGAGGAGCCGAATTTTGATG+TGG - tig0026478:64146-64165 Msa1429330:intron 45.0%
TCTCTCCATCATCCCAATGT+TGG + tig0026478:64205-64224 None:intergenic 45.0%
TCAGCAGACTTTCGCAATGA+AGG - tig0026478:64248-64267 Msa1429330:CDS 45.0%
GACTTTCGCAATGAAGGAAG+AGG - tig0026478:64254-64273 Msa1429330:CDS 45.0%
TGACCAACTTGGATTTCGTG+AGG - tig0026478:64280-64299 Msa1429330:CDS 45.0%
CTTCCTCACGAAATCCAAGT+TGG + tig0026478:64286-64305 None:intergenic 45.0%
ACTTGGATTTCGTGAGGAAG+CGG - tig0026478:64286-64305 Msa1429330:CDS 45.0%
CCTTATAGCCAAGCTCACAT+CGG - tig0026478:64372-64391 Msa1429330:intron 45.0%
!!! TCACATCGGTTTTCCAGACA+GGG - tig0026478:64386-64405 Msa1429330:intron 45.0%
! TTTTCCAGACAGGGCTTCTA+GGG - tig0026478:64395-64414 Msa1429330:intron 45.0%
TTCGGTTGAACGAATGACTG+AGG + tig0026478:64516-64535 None:intergenic 45.0%
ATATTAACCGGCTGAGCCAT+TGG + tig0026478:64540-64559 None:intergenic 45.0%
AATGGCTCAGCCGGTTAATA+TGG - tig0026478:64539-64558 Msa1429330:CDS 45.0%
GGAGGTGGAACCATATTAAC+CGG + tig0026478:64552-64571 None:intergenic 45.0%
TTGATGTTGCCGAGCTTGAG+AGG - tig0026478:63295-63314 Msa1429330:CDS 50.0%
GAGCAAGTCAAACCGAAGGA+AGG - tig0026478:63357-63376 Msa1429330:CDS 50.0%
TTTCCTCCTTGCCTGTTCCT+GGG + tig0026478:63408-63427 None:intergenic 50.0%
! TTTTCCTCCTTGCCTGTTCC+TGG + tig0026478:63409-63428 None:intergenic 50.0%
ATGGAGGTTTGCAAGGCTCA+AGG - tig0026478:63476-63495 Msa1429330:CDS 50.0%
TGGAGGTTTGCAAGGCTCAA+GGG - tig0026478:63477-63496 Msa1429330:CDS 50.0%
TACGGGATCATTCCCGAGAA+AGG - tig0026478:63507-63526 Msa1429330:CDS 50.0%
GTCACAGGCTTTCCTTTCTC+GGG + tig0026478:63522-63541 None:intergenic 50.0%
GGTCACAGGCTTTCCTTTCT+CGG + tig0026478:63523-63542 None:intergenic 50.0%
GAGAAAGGAAAGCCTGTGAC+CGG - tig0026478:63522-63541 Msa1429330:CDS 50.0%
AGAAAGGAAAGCCTGTGACC+GGG - tig0026478:63523-63542 Msa1429330:CDS 50.0%
CATCGGATAATCTCCGCGAA+TGG - tig0026478:63547-63566 Msa1429330:CDS 50.0%
! TAATCTCCGCGAATGGTGGA+AGG - tig0026478:63554-63573 Msa1429330:CDS 50.0%
TGGTACTTGGATATGGCAGC+AGG + tig0026478:63605-63624 None:intergenic 50.0%
CCGGAATTGCATTGTCTGCT+TGG + tig0026478:63625-63644 None:intergenic 50.0%
GCAATTCCGGGGAAGAATGA+TGG - tig0026478:63635-63654 Msa1429330:CDS 50.0%
ATTCCGGGGAAGAATGATGG+AGG - tig0026478:63638-63657 Msa1429330:CDS 50.0%
TTGCCTCCATCATTCTTCCC+CGG + tig0026478:63644-63663 None:intergenic 50.0%
AGGCGGTTTCCATTGGAGAA+GGG - tig0026478:63760-63779 Msa1429330:CDS 50.0%
TGAGGTTTCTTGTAAGGCGG+AGG + tig0026478:63859-63878 None:intergenic 50.0%
! CTGAAGAAGGCATGGAAGGT+TGG - tig0026478:63883-63902 Msa1429330:CDS 50.0%
AAGGTCCAGCTGCGACAAAT+GGG + tig0026478:64083-64102 None:intergenic 50.0%
AAAGGTCCAGCTGCGACAAA+TGG + tig0026478:64084-64103 None:intergenic 50.0%
TTTGTCGCAGCTGGACCTTT+CGG - tig0026478:64084-64103 Msa1429330:intron 50.0%
GGACCTTTCGGCATCAATGA+AGG - tig0026478:64096-64115 Msa1429330:intron 50.0%
!! GGAGCCGAATTTTGATGTGG+AGG - tig0026478:64149-64168 Msa1429330:intron 50.0%
CCGATGTGAGCTTGGCTATA+AGG + tig0026478:64375-64394 None:intergenic 50.0%
CTGGAAAACCGATGTGAGCT+TGG + tig0026478:64383-64402 None:intergenic 50.0%
!!! CTCACATCGGTTTTCCAGAC+AGG - tig0026478:64385-64404 Msa1429330:intron 50.0%
! GTTTTCCAGACAGGGCTTCT+AGG - tig0026478:64394-64413 Msa1429330:intron 50.0%
TTGATGTTGCCGAGCTTGAG+AGG - tig0026478:63295-63314 Msa1429330:CDS 50.0%
GAGCAAGTCAAACCGAAGGA+AGG - tig0026478:63357-63376 Msa1429330:CDS 50.0%
TTTCCTCCTTGCCTGTTCCT+GGG + tig0026478:63408-63427 None:intergenic 50.0%
! TTTTCCTCCTTGCCTGTTCC+TGG + tig0026478:63409-63428 None:intergenic 50.0%
ATGGAGGTTTGCAAGGCTCA+AGG - tig0026478:63476-63495 Msa1429330:CDS 50.0%
TGGAGGTTTGCAAGGCTCAA+GGG - tig0026478:63477-63496 Msa1429330:CDS 50.0%
TACGGGATCATTCCCGAGAA+AGG - tig0026478:63507-63526 Msa1429330:CDS 50.0%
GTCACAGGCTTTCCTTTCTC+GGG + tig0026478:63522-63541 None:intergenic 50.0%
GGTCACAGGCTTTCCTTTCT+CGG + tig0026478:63523-63542 None:intergenic 50.0%
GAGAAAGGAAAGCCTGTGAC+CGG - tig0026478:63522-63541 Msa1429330:CDS 50.0%
AGAAAGGAAAGCCTGTGACC+GGG - tig0026478:63523-63542 Msa1429330:CDS 50.0%
CATCGGATAATCTCCGCGAA+TGG - tig0026478:63547-63566 Msa1429330:CDS 50.0%
! TAATCTCCGCGAATGGTGGA+AGG - tig0026478:63554-63573 Msa1429330:CDS 50.0%
TGGTACTTGGATATGGCAGC+AGG + tig0026478:63605-63624 None:intergenic 50.0%
CCGGAATTGCATTGTCTGCT+TGG + tig0026478:63625-63644 None:intergenic 50.0%
GCAATTCCGGGGAAGAATGA+TGG - tig0026478:63635-63654 Msa1429330:CDS 50.0%
ATTCCGGGGAAGAATGATGG+AGG - tig0026478:63638-63657 Msa1429330:CDS 50.0%
TTGCCTCCATCATTCTTCCC+CGG + tig0026478:63644-63663 None:intergenic 50.0%
AGGCGGTTTCCATTGGAGAA+GGG - tig0026478:63760-63779 Msa1429330:CDS 50.0%
TGAGGTTTCTTGTAAGGCGG+AGG + tig0026478:63859-63878 None:intergenic 50.0%
! CTGAAGAAGGCATGGAAGGT+TGG - tig0026478:63883-63902 Msa1429330:CDS 50.0%
AAGGTCCAGCTGCGACAAAT+GGG + tig0026478:64083-64102 None:intergenic 50.0%
AAAGGTCCAGCTGCGACAAA+TGG + tig0026478:64084-64103 None:intergenic 50.0%
TTTGTCGCAGCTGGACCTTT+CGG - tig0026478:64084-64103 Msa1429330:intron 50.0%
GGACCTTTCGGCATCAATGA+AGG - tig0026478:64096-64115 Msa1429330:intron 50.0%
!! GGAGCCGAATTTTGATGTGG+AGG - tig0026478:64149-64168 Msa1429330:intron 50.0%
CCGATGTGAGCTTGGCTATA+AGG + tig0026478:64375-64394 None:intergenic 50.0%
CTGGAAAACCGATGTGAGCT+TGG + tig0026478:64383-64402 None:intergenic 50.0%
!!! CTCACATCGGTTTTCCAGAC+AGG - tig0026478:64385-64404 Msa1429330:intron 50.0%
! GTTTTCCAGACAGGGCTTCT+AGG - tig0026478:64394-64413 Msa1429330:intron 50.0%
ATGTTGCCGAGCTTGAGAGG+AGG - tig0026478:63298-63317 Msa1429330:CDS 55.0%
CCACATCCTCCTCTCAAGCT+CGG + tig0026478:63307-63326 None:intergenic 55.0%
AGCTTGAGAGGAGGATGTGG+AGG - tig0026478:63307-63326 Msa1429330:CDS 55.0%
GCTTGAGAGGAGGATGTGGA+GGG - tig0026478:63308-63327 Msa1429330:CDS 55.0%
GAGGAGGATGTGGAGGGATA+AGG - tig0026478:63314-63333 Msa1429330:CDS 55.0%
ACCGAAGGAAGGATCCGATG+CGG - tig0026478:63368-63387 Msa1429330:CDS 55.0%
AATCCCAGGAACAGGCAAGG+AGG - tig0026478:63402-63421 Msa1429330:CDS 55.0%
GAAAGGAAAGCCTGTGACCG+GGG - tig0026478:63524-63543 Msa1429330:CDS 55.0%
CGGATAATCTCCGCGAATGG+TGG - tig0026478:63550-63569 Msa1429330:CDS 55.0%
ATATGGCAGCAGGACCGTTG+CGG + tig0026478:63595-63614 None:intergenic 55.0%
GTGTGAGGGGTTGGACCAAT+CGG + tig0026478:63668-63687 None:intergenic 55.0%
TCTTGCAAGGTGTGAGGGGT+TGG + tig0026478:63677-63696 None:intergenic 55.0%
CAGCTCTTGCAAGGTGTGAG+GGG + tig0026478:63681-63700 None:intergenic 55.0%
GCAGCTCTTGCAAGGTGTGA+GGG + tig0026478:63682-63701 None:intergenic 55.0%
TGCAGCTCTTGCAAGGTGTG+AGG + tig0026478:63683-63702 None:intergenic 55.0%
TCACACCTTGCAAGAGCTGC+AGG - tig0026478:63682-63701 Msa1429330:CDS 55.0%
TGTGTCCTGCAGCTCTTGCA+AGG + tig0026478:63690-63709 None:intergenic 55.0%
AGAGCTGCAGGACACAACCT+TGG - tig0026478:63694-63713 Msa1429330:CDS 55.0%
GAGCTGCAGGACACAACCTT+GGG - tig0026478:63695-63714 Msa1429330:CDS 55.0%
CAACACTGTGATCCCCTCAG+AGG - tig0026478:63740-63759 Msa1429330:CDS 55.0%
CAATGGAAACCGCCTCTGAG+GGG + tig0026478:63755-63774 None:intergenic 55.0%
CCAATGGAAACCGCCTCTGA+GGG + tig0026478:63756-63775 None:intergenic 55.0%
TCCAATGGAAACCGCCTCTG+AGG + tig0026478:63757-63776 None:intergenic 55.0%
GAGGCGGTTTCCATTGGAGA+AGG - tig0026478:63759-63778 Msa1429330:CDS 55.0%
GGAGGAACACCCTTCTCCAA+TGG + tig0026478:63772-63791 None:intergenic 55.0%
!! AGAAGGGTGTTCCTCCTCCA+TGG - tig0026478:63776-63795 Msa1429330:CDS 55.0%
GGCGGAGGACCTTGATCTTT+CGG + tig0026478:63844-63863 None:intergenic 55.0%
! CGGCTAAGGAAAGTGCAACC+TGG - tig0026478:63998-64017 Msa1429330:CDS 55.0%
ATCAAGAGGAGGCCTTAGCG+CGG - tig0026478:64034-64053 Msa1429330:CDS 55.0%
AGGATAAAGCTCCCGCGCTA+AGG + tig0026478:64049-64068 None:intergenic 55.0%
AGGTCCAGCTGCGACAAATG+GGG + tig0026478:64082-64101 None:intergenic 55.0%
TGATGTCGATGGGGGAGAAG+AGG - tig0026478:64128-64147 Msa1429330:intron 55.0%
GGAAGAGGCTGTGACCAACT+TGG - tig0026478:64269-64288 Msa1429330:CDS 55.0%
GTGAGGAAGCGGAAGATCTC+TGG - tig0026478:64297-64316 Msa1429330:CDS 55.0%
GTATCCCTAGAAGCCCTGTC+TGG + tig0026478:64402-64421 None:intergenic 55.0%
ACCGAAACCAATGGCTCAGC+CGG - tig0026478:64530-64549 Msa1429330:CDS 55.0%
!! ACCGGCTGAGCCATTGGTTT+CGG + tig0026478:64534-64553 None:intergenic 55.0%
ATGTTGCCGAGCTTGAGAGG+AGG - tig0026478:63298-63317 Msa1429330:CDS 55.0%
CCACATCCTCCTCTCAAGCT+CGG + tig0026478:63307-63326 None:intergenic 55.0%
AGCTTGAGAGGAGGATGTGG+AGG - tig0026478:63307-63326 Msa1429330:CDS 55.0%
GCTTGAGAGGAGGATGTGGA+GGG - tig0026478:63308-63327 Msa1429330:CDS 55.0%
GAGGAGGATGTGGAGGGATA+AGG - tig0026478:63314-63333 Msa1429330:CDS 55.0%
ACCGAAGGAAGGATCCGATG+CGG - tig0026478:63368-63387 Msa1429330:CDS 55.0%
AATCCCAGGAACAGGCAAGG+AGG - tig0026478:63402-63421 Msa1429330:CDS 55.0%
GAAAGGAAAGCCTGTGACCG+GGG - tig0026478:63524-63543 Msa1429330:CDS 55.0%
CGGATAATCTCCGCGAATGG+TGG - tig0026478:63550-63569 Msa1429330:CDS 55.0%
ATATGGCAGCAGGACCGTTG+CGG + tig0026478:63595-63614 None:intergenic 55.0%
GTGTGAGGGGTTGGACCAAT+CGG + tig0026478:63668-63687 None:intergenic 55.0%
TCTTGCAAGGTGTGAGGGGT+TGG + tig0026478:63677-63696 None:intergenic 55.0%
CAGCTCTTGCAAGGTGTGAG+GGG + tig0026478:63681-63700 None:intergenic 55.0%
GCAGCTCTTGCAAGGTGTGA+GGG + tig0026478:63682-63701 None:intergenic 55.0%
TGCAGCTCTTGCAAGGTGTG+AGG + tig0026478:63683-63702 None:intergenic 55.0%
TCACACCTTGCAAGAGCTGC+AGG - tig0026478:63682-63701 Msa1429330:CDS 55.0%
TGTGTCCTGCAGCTCTTGCA+AGG + tig0026478:63690-63709 None:intergenic 55.0%
AGAGCTGCAGGACACAACCT+TGG - tig0026478:63694-63713 Msa1429330:CDS 55.0%
GAGCTGCAGGACACAACCTT+GGG - tig0026478:63695-63714 Msa1429330:CDS 55.0%
CAACACTGTGATCCCCTCAG+AGG - tig0026478:63740-63759 Msa1429330:CDS 55.0%
CAATGGAAACCGCCTCTGAG+GGG + tig0026478:63755-63774 None:intergenic 55.0%
CCAATGGAAACCGCCTCTGA+GGG + tig0026478:63756-63775 None:intergenic 55.0%
TCCAATGGAAACCGCCTCTG+AGG + tig0026478:63757-63776 None:intergenic 55.0%
GAGGCGGTTTCCATTGGAGA+AGG - tig0026478:63759-63778 Msa1429330:CDS 55.0%
GGAGGAACACCCTTCTCCAA+TGG + tig0026478:63772-63791 None:intergenic 55.0%
!! AGAAGGGTGTTCCTCCTCCA+TGG - tig0026478:63776-63795 Msa1429330:CDS 55.0%
GGCGGAGGACCTTGATCTTT+CGG + tig0026478:63844-63863 None:intergenic 55.0%
! CGGCTAAGGAAAGTGCAACC+TGG - tig0026478:63998-64017 Msa1429330:CDS 55.0%
ATCAAGAGGAGGCCTTAGCG+CGG - tig0026478:64034-64053 Msa1429330:CDS 55.0%
AGGATAAAGCTCCCGCGCTA+AGG + tig0026478:64049-64068 None:intergenic 55.0%
AGGTCCAGCTGCGACAAATG+GGG + tig0026478:64082-64101 None:intergenic 55.0%
TGATGTCGATGGGGGAGAAG+AGG - tig0026478:64128-64147 Msa1429330:intron 55.0%
GGAAGAGGCTGTGACCAACT+TGG - tig0026478:64269-64288 Msa1429330:CDS 55.0%
GTGAGGAAGCGGAAGATCTC+TGG - tig0026478:64297-64316 Msa1429330:CDS 55.0%
GTATCCCTAGAAGCCCTGTC+TGG + tig0026478:64402-64421 None:intergenic 55.0%
ACCGAAACCAATGGCTCAGC+CGG - tig0026478:64530-64549 Msa1429330:CDS 55.0%
!! ACCGGCTGAGCCATTGGTTT+CGG + tig0026478:64534-64553 None:intergenic 55.0%
CCGAGCTTGAGAGGAGGATG+TGG - tig0026478:63304-63323 Msa1429330:CDS 60.0%
GCCGCATCGGATCCTTCCTT+CGG + tig0026478:63372-63391 None:intergenic 60.0%
ATTGCCTCTGCTGGCCGCAT+CGG + tig0026478:63385-63404 None:intergenic 60.0%
GTTCCTGGGATTGCCTCTGC+TGG + tig0026478:63394-63413 None:intergenic 60.0%
GCAGAGGCAATCCCAGGAAC+AGG - tig0026478:63394-63413 Msa1429330:CDS 60.0%
GGCAATCCCAGGAACAGGCA+AGG - tig0026478:63399-63418 Msa1429330:CDS 60.0%
AAAGCCTGTGACCGGGGCAT+CGG - tig0026478:63530-63549 Msa1429330:CDS 60.0%
TTATCCGATGCCCCGGTCAC+AGG + tig0026478:63537-63556 None:intergenic 60.0%
GCGGAGATTATCCGATGCCC+CGG + tig0026478:63544-63563 None:intergenic 60.0%
CACTGTGATCCCCTCAGAGG+CGG - tig0026478:63743-63762 Msa1429330:CDS 60.0%
CCCTCAGAGGCGGTTTCCAT+TGG - tig0026478:63753-63772 Msa1429330:CDS 60.0%
! AGGGTGTTCCTCCTCCATGG+TGG - tig0026478:63779-63798 Msa1429330:CDS 60.0%
CTCCTCCATGGTGGCCTACA+GGG - tig0026478:63788-63807 Msa1429330:CDS 60.0%
TTCCCTGTAGGCCACCATGG+AGG + tig0026478:63793-63812 None:intergenic 60.0%
TCCATGGTGGCCTACAGGGA+AGG - tig0026478:63792-63811 Msa1429330:CDS 60.0%
TCCTTCCCTGTAGGCCACCA+TGG + tig0026478:63796-63815 None:intergenic 60.0%
ATGGTGGCCTACAGGGAAGG+AGG - tig0026478:63795-63814 Msa1429330:CDS 60.0%
CACCACTCCTCCTTCCCTGT+AGG + tig0026478:63805-63824 None:intergenic 60.0%
CTACAGGGAAGGAGGAGTGG+TGG - tig0026478:63803-63822 Msa1429330:CDS 60.0%
GAGGAGTGGTGGCCCCAAAT+TGG - tig0026478:63814-63833 Msa1429330:CDS 60.0%
TCAAGAGGAGGCCTTAGCGC+GGG - tig0026478:64035-64054 Msa1429330:CDS 60.0%
ATCCCCCCATTTGTCGCAGC+TGG - tig0026478:64075-64094 Msa1429330:intron 60.0%
GTCCAGCTGCGACAAATGGG+GGG + tig0026478:64080-64099 None:intergenic 60.0%
GGTCCAGCTGCGACAAATGG+GGG + tig0026478:64081-64100 None:intergenic 60.0%
CCGAGCTTGAGAGGAGGATG+TGG - tig0026478:63304-63323 Msa1429330:CDS 60.0%
GCCGCATCGGATCCTTCCTT+CGG + tig0026478:63372-63391 None:intergenic 60.0%
ATTGCCTCTGCTGGCCGCAT+CGG + tig0026478:63385-63404 None:intergenic 60.0%
GTTCCTGGGATTGCCTCTGC+TGG + tig0026478:63394-63413 None:intergenic 60.0%
GCAGAGGCAATCCCAGGAAC+AGG - tig0026478:63394-63413 Msa1429330:CDS 60.0%
GGCAATCCCAGGAACAGGCA+AGG - tig0026478:63399-63418 Msa1429330:CDS 60.0%
AAAGCCTGTGACCGGGGCAT+CGG - tig0026478:63530-63549 Msa1429330:CDS 60.0%
TTATCCGATGCCCCGGTCAC+AGG + tig0026478:63537-63556 None:intergenic 60.0%
GCGGAGATTATCCGATGCCC+CGG + tig0026478:63544-63563 None:intergenic 60.0%
CACTGTGATCCCCTCAGAGG+CGG - tig0026478:63743-63762 Msa1429330:CDS 60.0%
CCCTCAGAGGCGGTTTCCAT+TGG - tig0026478:63753-63772 Msa1429330:CDS 60.0%
! AGGGTGTTCCTCCTCCATGG+TGG - tig0026478:63779-63798 Msa1429330:CDS 60.0%
CTCCTCCATGGTGGCCTACA+GGG - tig0026478:63788-63807 Msa1429330:CDS 60.0%
TTCCCTGTAGGCCACCATGG+AGG + tig0026478:63793-63812 None:intergenic 60.0%
TCCATGGTGGCCTACAGGGA+AGG - tig0026478:63792-63811 Msa1429330:CDS 60.0%
TCCTTCCCTGTAGGCCACCA+TGG + tig0026478:63796-63815 None:intergenic 60.0%
ATGGTGGCCTACAGGGAAGG+AGG - tig0026478:63795-63814 Msa1429330:CDS 60.0%
CACCACTCCTCCTTCCCTGT+AGG + tig0026478:63805-63824 None:intergenic 60.0%
CTACAGGGAAGGAGGAGTGG+TGG - tig0026478:63803-63822 Msa1429330:CDS 60.0%
GAGGAGTGGTGGCCCCAAAT+TGG - tig0026478:63814-63833 Msa1429330:CDS 60.0%
TCAAGAGGAGGCCTTAGCGC+GGG - tig0026478:64035-64054 Msa1429330:CDS 60.0%
ATCCCCCCATTTGTCGCAGC+TGG - tig0026478:64075-64094 Msa1429330:intron 60.0%
GTCCAGCTGCGACAAATGGG+GGG + tig0026478:64080-64099 None:intergenic 60.0%
GGTCCAGCTGCGACAAATGG+GGG + tig0026478:64081-64100 None:intergenic 60.0%
CCTGTAGGCCACCATGGAGG+AGG + tig0026478:63790-63809 None:intergenic 65.0%
CCTCCTCCATGGTGGCCTAC+AGG - tig0026478:63787-63806 Msa1429330:CDS 65.0%
GGCCTACAGGGAAGGAGGAG+TGG - tig0026478:63800-63819 Msa1429330:CDS 65.0%
CCTGTAGGCCACCATGGAGG+AGG + tig0026478:63790-63809 None:intergenic 65.0%
CCTCCTCCATGGTGGCCTAC+AGG - tig0026478:63787-63806 Msa1429330:CDS 65.0%
GGCCTACAGGGAAGGAGGAG+TGG - tig0026478:63800-63819 Msa1429330:CDS 65.0%
GGATCCGATGCGGCCAGCAG+AGG - tig0026478:63378-63397 Msa1429330:CDS 70.0%
CGGCCAGCAGAGGCAATCCC+AGG - tig0026478:63388-63407 Msa1429330:CDS 70.0%
GGATCCGATGCGGCCAGCAG+AGG - tig0026478:63378-63397 Msa1429330:CDS 70.0%
CGGCCAGCAGAGGCAATCCC+AGG - tig0026478:63388-63407 Msa1429330:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0026478 gene 63264 64581 63264 ID=Msa1429330;Name=Msa1429330
tig0026478 mRNA 63264 64581 63264 ID=Msa1429330-mRNA-1;Parent=Msa1429330;Name=Msa1429330-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0|0|1|1|1|3|0|384
tig0026478 exon 64430 64581 64430 ID=Msa1429330-mRNA-1:exon:6453;Parent=Msa1429330-mRNA-1
tig0026478 exon 64174 64354 64174 ID=Msa1429330-mRNA-1:exon:6452;Parent=Msa1429330-mRNA-1
tig0026478 exon 63264 64085 63264 ID=Msa1429330-mRNA-1:exon:6451;Parent=Msa1429330-mRNA-1
tig0026478 CDS 64430 64581 64430 ID=Msa1429330-mRNA-1:cds;Parent=Msa1429330-mRNA-1
tig0026478 CDS 64174 64354 64174 ID=Msa1429330-mRNA-1:cds;Parent=Msa1429330-mRNA-1
tig0026478 CDS 63264 64085 63264 ID=Msa1429330-mRNA-1:cds;Parent=Msa1429330-mRNA-1
Gene Sequence

>Msa1429330

ATGGTTGACGAAGATTACAGCGACGATGATATTGATGTTGCCGAGCTTGAGAGGAGGATGTGGAGGGATAAGGTGCTTCTCAAGCGATTAAAGGAGCAAGTCAAACCGAAGGAAGGATCCGATGCGGCCAGCAGAGGCAATCCCAGGAACAGGCTCAAGGGTTTTTGTTACGGGATCATTCCCGAGAAAGGAAAGCCTGTGACCGGGGCATCGGATAATCTCCGCGAATGGTGGAAGGATAAGTTAGGTTTGACCGCAACGGTCCTGCTGCCATATCCAAGTACCAAGCAGACAATGCAATTCCGGGGAAGAATGATGGAGGCAATCCGATTGAGGCGGTTTCCATTGGAGAAGGGTGTTCCTCCTCCATGGTGGCCTACAGGGAAGGAGGAGTGGTGGCCCCAAATTGGTTTACCGAAAGATCAAGGTCCTCCGCCTTACAAGAAACCTCATGATCTGAAGAAGGCATGGAAGGTTGGAGTTCTGACTGCTGTCATCAAGCACATGTCTCCCGACATTGCCAAAATTCGCAAGCTTGTAAGGCAATCCAAATGCCTTCAAGATAAAATGACGGCTAAGGAAAGTGCAACCTGGCTTGCAATCGTTAATCAAGAGGAGGCCTTAGCGCGGGAGCTTTATCCTGATTATATCCCCCCATTTGTCGCAGCTGGACCTTTCGGCATCAATGAAGGCAATGAGTATGATGTCGATGGGGGAGAAGAGGAGCCGAATTTTGATGTGGAGGAACGGAAACCTGAGAATCTTCTTCATCAATCCAACATTGGGATGATGGAGAGAATGAGAAATGTAAGACTGCCATTTCAGCAGACTTTCGCAATGAAGGAAGAGGCTGTGACCAACTTGGATTTCGTGAGGAAGCGGAAGATCTCTGGTGAATTTAACATGATGGATCCTAAAATTTTCACTTGCCAACACTCAACATGTCCTTATAGCCAAGCTCACATCGGTTTTCCAGACAGGGCTTCTAGGGATACTCATCAATTGAGTTGTCCATATAGAGGGTCTTCTTCATCTGATTTTGGTGGTCCAAGTTTTCATGCTAATGAGATAAAACCAGTCATATATCCTCAGTCATTCGTTCAACCGAAACCAATGGCTCAGCCGGTTAATATGGTTCCACCTCCATCGATATAA
Protein sequence

>Msa1429330

MVDEDYSDDDIDVAELERRMWRDKVLLKRLKEQVKPKEGSDAASRGNPRNRLKGFCYGIIPEKGKPVTGASDNLREWWKDKLGLTATVLLPYPSTKQTMQFRGRMMEAIRLRRFPLEKGVPPPWWPTGKEEWWPQIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIVNQEEALARELYPDYIPPFVAAGPFGINEGNEYDVDGGEEEPNFDVEERKPENLLHQSNIGMMERMRNVRLPFQQTFAMKEEAVTNLDFVRKRKISGEFNMMDPKIFTCQHSTCPYSQAHIGFPDRASRDTHQLSCPYRGSSSSDFGGPSFHANEIKPVIYPQSFVQPKPMAQPVNMVPPPSI*