AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1429950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1429950 MtrunA17_Chr8g0353751 97.798 999 22 0 5 1003 27 1025 0.0 2019
Msa1429950 MtrunA17_Chr3g0077931 83.582 67 7 1 138 204 27 89 7.12e-33 122
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1429950 AT3G12280.2 70.030 1001 271 12 13 1003 31 1012 0.0 1383
Msa1429950 AT3G12280.1 69.760 1002 273 13 13 1003 31 1013 0.0 1379

Find 230 sgRNAs with CRISPR-Local

Find 406 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATATCTGCTACTAAATTAT+TGG 0.180777 tig0026602:-3006 None:intergenic
CCAATCTCATGGACAATATA+TGG 0.188042 tig0026602:+3800 Msa1429950:CDS
CCGAATCGATTGCTTAAAAT+TGG 0.202321 tig0026602:-1898 None:intergenic
GTAGTCATTGCTGTGCTTAC+AGG 0.209820 tig0026602:-3589 None:intergenic
CCTGTTTAACCGATTGTTTA+TGG 0.228388 tig0026602:-6633 None:intergenic
TAATTGATTTCAGCTCAAAA+TGG 0.230578 tig0026602:+4539 Msa1429950:intron
CCTCTAACCCTTTGTACTTT+TGG 0.235087 tig0026602:+7004 Msa1429950:three_prime_UTR
AGAGAGATGTCCGTTGATTT+AGG 0.239222 tig0026602:-5415 None:intergenic
CCATGAGATTGGCACTTTGC+AGG 0.246558 tig0026602:-3789 None:intergenic
TTCATTGGAGGAACGACTTT+TGG 0.266400 tig0026602:+4122 Msa1429950:CDS
GAGAGCTTGGTATGGGAAAA+AGG 0.273007 tig0026602:+4144 Msa1429950:CDS
CCTCCTGGATTCGGCTTTGT+TGG 0.285095 tig0026602:-4837 None:intergenic
TGAGGGGTCCTCTTACTTTC+CGG 0.292141 tig0026602:-6743 None:intergenic
ACAAAATGATTTGGTCAATA+TGG 0.295156 tig0026602:-5448 None:intergenic
TGCTGTTAGCTTCGGGTACT+TGG 0.304359 tig0026602:-5813 None:intergenic
AACACATGCATAATAGCTTT+TGG 0.307459 tig0026602:-6564 None:intergenic
TATTCTAATTATTCATGTTC+CGG 0.320431 tig0026602:+2680 Msa1429950:CDS
GGAGAAACATGTGCAGAAAC+TGG 0.326485 tig0026602:+4864 Msa1429950:CDS
TCCCTCTGTAAAGCCACTTC+TGG 0.345017 tig0026602:+5753 Msa1429950:CDS
GGGCTTGGTTAGTGACTCTA+TGG 0.347271 tig0026602:+6785 Msa1429950:CDS
GGCTTCTAATCTTCGTTGTT+CGG 0.348552 tig0026602:-3824 None:intergenic
CATGTTTCTCCTCCACCTCC+TGG 0.355209 tig0026602:-4852 None:intergenic
TCTCCTCCACCTCCTGGATT+CGG 0.359511 tig0026602:-4846 None:intergenic
CTTGGGAAAGGCGATATTCT+AGG 0.363669 tig0026602:-5959 None:intergenic
CTTGGCGACCGATGTGTAAC+TGG 0.365077 tig0026602:+3763 Msa1429950:CDS
CATGGCAAATGTTTCATCAA+TGG 0.366338 tig0026602:+1507 Msa1429950:CDS
AATTGATTTCAGCTCAAAAT+GGG 0.366471 tig0026602:+4540 Msa1429950:intron
AGCTCTTGTGACGGCTTTGA+TGG 0.368531 tig0026602:-3646 None:intergenic
TTCGCATTCAGATGCCAAAC+AGG 0.371242 tig0026602:-3042 None:intergenic
GACTCGCAACAAGGGTGAAC+TGG 0.371842 tig0026602:+3267 Msa1429950:CDS
TTACTTCACCGGTGAAAGAT+AGG 0.373421 tig0026602:+4627 Msa1429950:CDS
CTCCATGAGATCTTTAAAAT+AGG 0.374438 tig0026602:-3191 None:intergenic
CTAGCTTCAGGAAGTTTGTC+TGG 0.374470 tig0026602:+3325 Msa1429950:CDS
AAGCCATGAAGTTATACTAT+AGG 0.375968 tig0026602:+3842 Msa1429950:CDS
CCTCAGTTTGTTGTCAAAGC+TGG 0.376003 tig0026602:+1874 Msa1429950:CDS
ATATAATCTCCCTAAAAGTT+AGG 0.376351 tig0026602:-5582 None:intergenic
CAATGGTTTAATTTCTATCA+TGG 0.376673 tig0026602:+2379 Msa1429950:CDS
ATTTGCCATGAGAAGATGTT+TGG 0.379727 tig0026602:-1494 None:intergenic
CATCATTCAATTTAAGAGTC+AGG 0.380501 tig0026602:-6879 None:intergenic
AGAAGCAACACAAAATGATT+TGG 0.382324 tig0026602:-5457 None:intergenic
GTATCTGAGTGCCATCGTTT+TGG 0.390434 tig0026602:+2290 Msa1429950:CDS
CAGAAGAAGCAGAGCGGTAC+TGG 0.390924 tig0026602:+1626 Msa1429950:CDS
TCTCCTGCGTCCCATGCTAA+TGG 0.391861 tig0026602:+3529 Msa1429950:CDS
GAGGCGACATCTTAATTCAT+TGG 0.395479 tig0026602:+4107 Msa1429950:CDS
CCATATATTGTCCATGAGAT+TGG 0.398584 tig0026602:-3800 None:intergenic
TTCTCTGTACAGAGCCGCTT+TGG 0.401748 tig0026602:-4575 None:intergenic
GGGTGAAAGCGGACTTATAA+TGG 0.402652 tig0026602:-3500 None:intergenic
ATCTTTGAATTTGTGCTACC+TGG 0.402721 tig0026602:-3556 None:intergenic
AAAGAAGAGATTGAGAATAC+TGG 0.403583 tig0026602:+1706 Msa1429950:CDS
AATGTTTCATCAATGGGAAA+TGG 0.408483 tig0026602:+1514 Msa1429950:CDS
TCCCATGCTAATGGTATTCC+AGG 0.409923 tig0026602:+3538 Msa1429950:CDS
CCATAAACAATCGGTTAAAC+AGG 0.410931 tig0026602:+6633 Msa1429950:CDS
CAACCTATAGTATAACTTCA+TGG 0.413474 tig0026602:-3845 None:intergenic
CCAGGCAAAGTCTCGGGCTT+AGG 0.416595 tig0026602:-4321 None:intergenic
CCAAAAGTACAAAGGGTTAG+AGG 0.417262 tig0026602:-7004 None:intergenic
TCCGTAGTGTATTTGTTGAC+TGG 0.418050 tig0026602:+5644 Msa1429950:CDS
GATGACAGCCTGCTAGCTTC+AGG 0.420478 tig0026602:+3313 Msa1429950:CDS
CCCTTTCTGCAGAAATCAAT+CGG 0.422969 tig0026602:+4205 Msa1429950:CDS
AAAGAAGCAATGGATCTGTT+TGG 0.423829 tig0026602:+1466 Msa1429950:CDS
TTCAGCAACCGGAAAGTAAG+AGG 0.424037 tig0026602:+6735 Msa1429950:intron
AGATGTCGCCTCAATTCTCT+TGG 0.424636 tig0026602:-4096 None:intergenic
GGGGACATGTCAGGAAGGCT+TGG 0.427386 tig0026602:-5977 None:intergenic
ATGGCAAATGTTTCATCAAT+GGG 0.427540 tig0026602:+1508 Msa1429950:CDS
ATTGAAGAAGACGCCCTGTT+TGG 0.427906 tig0026602:+3028 Msa1429950:CDS
ATCTAATGATGGCATTGGTT+CGG 0.428780 tig0026602:-4241 None:intergenic
CCGATTGATTTCTGCAGAAA+GGG 0.431707 tig0026602:-4205 None:intergenic
CTTCTGGTTGAACTTGGCCC+TGG 0.432326 tig0026602:+5769 Msa1429950:CDS
TCTGATACTGAGTTCATACT+AGG 0.435799 tig0026602:+6924 Msa1429950:three_prime_UTR
GGCCATTTAGTTCAAAATCC+TGG 0.436389 tig0026602:+5932 Msa1429950:intron
AAAGCTATTATGCATGTGTT+GGG 0.437876 tig0026602:+6567 Msa1429950:CDS
TGGAAGTTCCGCGTCATCAT+CGG 0.441864 tig0026602:+6833 Msa1429950:CDS
GCAATCGATTCGGCTCTGAT+TGG 0.446822 tig0026602:+1908 Msa1429950:CDS
TCCGTTGATTTAGGATTCGC+TGG 0.446891 tig0026602:-5406 None:intergenic
AAGCCACTTCTGGTTGAACT+TGG 0.448178 tig0026602:+5763 Msa1429950:CDS
CATGGGACGCAGGAGAGCGC+TGG 0.451678 tig0026602:-3522 None:intergenic
ACCGATTGTTTATGGCAGTC+AGG 0.452319 tig0026602:-6625 None:intergenic
CGGTCGCCAAGGGGACTACT+AGG 0.452836 tig0026602:-3751 None:intergenic
CAATCGATTCGGCTCTGATT+GGG 0.455553 tig0026602:+1909 Msa1429950:CDS
AAGCGGACTTATAATGGTCT+TGG 0.455677 tig0026602:-3494 None:intergenic
GGAGGTTCTTCAGTTTCAGC+AGG 0.456543 tig0026602:+3346 Msa1429950:CDS
TAGTCATTGCTGTGCTTACA+GGG 0.457230 tig0026602:-3588 None:intergenic
CTTCTCACAGTTGCTCCACC+AGG 0.457515 tig0026602:-5787 None:intergenic
GGAAGTTCCGCGTCATCATC+GGG 0.460981 tig0026602:+6834 Msa1429950:CDS
CGAGCAGAAGCTCAAATACT+TGG 0.466167 tig0026602:+3883 Msa1429950:CDS
ATGTGTATGTCTCTCCATTA+CGG 0.467243 tig0026602:+6023 Msa1429950:CDS
ATTTCATCTAATGATGGCAT+TGG 0.470930 tig0026602:-4246 None:intergenic
GGCGATATTCTAGGAGATCC+AGG 0.474138 tig0026602:-5950 None:intergenic
GCCGATTGATTTCTGCAGAA+AGG 0.475116 tig0026602:-4206 None:intergenic
CATTTACCAGGCAAAGTCTC+GGG 0.476373 tig0026602:-4327 None:intergenic
TGATGACGTTGATGTGGGCT+TGG 0.481239 tig0026602:+6770 Msa1429950:CDS
ATGGGACGCAGGAGAGCGCT+GGG 0.483784 tig0026602:-3521 None:intergenic
GTCGCCGGCACGCCGTAATG+GGG 0.486653 tig0026602:+5666 Msa1429950:CDS
AACCTTTATCAAAATCCTCT+AGG 0.489938 tig0026602:-3073 None:intergenic
GAGTTCATACTAGGTGTTGG+TGG 0.490221 tig0026602:+6933 Msa1429950:three_prime_UTR
ATTGCAATTTCATCTAATGA+TGG 0.491555 tig0026602:-4252 None:intergenic
GGGACATGTCAGGAAGGCTT+GGG 0.491881 tig0026602:-5976 None:intergenic
AACTTCCATTCTGCAGATAG+AGG 0.493188 tig0026602:-6818 None:intergenic
TTGAAATTCCGAAAACGAGC+CGG 0.493490 tig0026602:-2699 None:intergenic
GAAGTTATACTATAGGTTGT+TGG 0.494002 tig0026602:+3849 Msa1429950:CDS
AAAAGCTATTATGCATGTGT+TGG 0.495182 tig0026602:+6566 Msa1429950:CDS
TTGGGAGCAGTCAGAATAAG+TGG 0.496471 tig0026602:+5326 Msa1429950:CDS
CCTAAGCCCGAGACTTTGCC+TGG 0.496686 tig0026602:+4321 Msa1429950:CDS
CGGACTTATAATGGTCTTGG+AGG 0.497059 tig0026602:-3491 None:intergenic
CTGGTTGAACTTGGCCCTGG+TGG 0.499233 tig0026602:+5772 Msa1429950:CDS
AATGCTGATTGCAACGGAGG+TGG 0.502473 tig0026602:-4686 None:intergenic
TGAAAGGTTATTCATTAATG+AGG 0.503047 tig0026602:+3291 Msa1429950:CDS
CAACACACCAAAAGTACAAA+GGG 0.503655 tig0026602:-7011 None:intergenic
TGTGACGGCTTTGATGGAAG+TGG 0.505729 tig0026602:-3640 None:intergenic
TAAATTATTGGCTTGCTCCA+TGG 0.507227 tig0026602:-2994 None:intergenic
ACCTGACTGCCATAAACAAT+CGG 0.510932 tig0026602:+6624 Msa1429950:CDS
TCTCATGGAGGAATCCTCTC+TGG 0.520469 tig0026602:+3204 Msa1429950:CDS
CAAGTATTTGAGCTTCTGCT+CGG 0.520559 tig0026602:-3882 None:intergenic
ATGCTGATTGCAACGGAGGT+GGG 0.522460 tig0026602:-4685 None:intergenic
CCTGCAAAGTGCCAATCTCA+TGG 0.523510 tig0026602:+3789 Msa1429950:CDS
CCAGTCCTCTCAAGTACAGC+AGG 0.523752 tig0026602:-4012 None:intergenic
ATTCAGGACTCTGCACGCTT+CGG 0.523901 tig0026602:+2723 Msa1429950:CDS
CAATCTCATGGACAATATAT+GGG 0.524171 tig0026602:+3801 Msa1429950:CDS
AGTTTCAGCAGGAGGTGTAA+AGG 0.526265 tig0026602:+3357 Msa1429950:CDS
CATGATAGAAATTAAACCAT+TGG 0.526335 tig0026602:-2378 None:intergenic
ATCAACGTCATCAAACTTGA+GGG 0.527261 tig0026602:-6760 None:intergenic
GGCTTAGGCAAGGAAGGCAC+AGG 0.528278 tig0026602:-4306 None:intergenic
GATGTCGCCTCAATTCTCTT+GGG 0.529003 tig0026602:-4095 None:intergenic
AGTCCAACAAAGCCGAATCC+AGG 0.533092 tig0026602:+4834 Msa1429950:intron
CGTTGCAATCAGCATTCGCC+AGG 0.533376 tig0026602:+4693 Msa1429950:CDS
ATGCATATTAACTTCTCTTG+TGG 0.533729 tig0026602:+4273 Msa1429950:CDS
AACAGCCTCTATCTGCAGAA+TGG 0.534235 tig0026602:+6813 Msa1429950:CDS
GACTTGGTGACTTGCACCAA+TGG 0.536529 tig0026602:+2362 Msa1429950:CDS
TCATTTACCAGGCAAAGTCT+CGG 0.536953 tig0026602:-4328 None:intergenic
TTGATTTCTGCAGAAAGGGC+AGG 0.537511 tig0026602:-4201 None:intergenic
GGTTCTTCAGTTTCAGCAGG+AGG 0.540848 tig0026602:+3349 Msa1429950:CDS
TACAATTATCTCAGCAGACA+AGG 0.541805 tig0026602:+5363 Msa1429950:CDS
ACAAACTTCCTGAAGCTAGC+AGG 0.543134 tig0026602:-3321 None:intergenic
TTAGGCAAGGAAGGCACAGG+AGG 0.548000 tig0026602:-4303 None:intergenic
AAGCCGAATCCAGGAGGTGG+AGG 0.548856 tig0026602:+4843 Msa1429950:CDS
TGTATTTGTTGACTGGTCGC+CGG 0.549615 tig0026602:+5651 Msa1429950:CDS
ATGTTCTGCAGAATTAGTCC+TGG 0.553031 tig0026602:+3960 Msa1429950:CDS
CATTGCTGTGCTTACAGGGG+TGG 0.554487 tig0026602:-3584 None:intergenic
GAAAAGCTGTAAAGAAGCAA+TGG 0.555152 tig0026602:+1456 Msa1429950:CDS
GAGAAACATGTGCAGAAACT+GGG 0.557230 tig0026602:+4865 Msa1429950:CDS
AGCTAGACATAGAACAGGAC+AGG 0.557372 tig0026602:+5690 Msa1429950:CDS
GTCTCGGGCTTAGGCAAGGA+AGG 0.557825 tig0026602:-4312 None:intergenic
AACATGCAAGCATACACCTA+TGG 0.557938 tig0026602:-3942 None:intergenic
CAAGTTTGATGACGTTGATG+TGG 0.558866 tig0026602:+6764 Msa1429950:CDS
TCACAGTCTTGTGAGTAGCC+AGG 0.560850 tig0026602:-3978 None:intergenic
GTTGCAGAATGAGCTAGCAT+TGG 0.561323 tig0026602:+1429 Msa1429950:CDS
CCTGCTGTACTTGAGAGGAC+TGG 0.562817 tig0026602:+4012 Msa1429950:CDS
AGGGGCTATGTAAGAGCGGT+GGG 0.566383 tig0026602:+6967 Msa1429950:three_prime_UTR
GAATAAGTGGAATGGTTGAA+AGG 0.566824 tig0026602:+5339 Msa1429950:CDS
ACCAGAAGTGGCTTTACAGA+GGG 0.566826 tig0026602:-5754 None:intergenic
TTGCTTCTATGGAGTAGCAA+AGG 0.567009 tig0026602:+5472 Msa1429950:CDS
ACAAAGCCGAATCCAGGAGG+TGG 0.568526 tig0026602:+4840 Msa1429950:CDS
CATATTAACTTCTCTTGTGG+AGG 0.570322 tig0026602:+4276 Msa1429950:CDS
CTCTCCATTACGGTCATCCA+AGG 0.572003 tig0026602:+6033 Msa1429950:CDS
TGTTTCCTGCTGTACTTGAG+AGG 0.573503 tig0026602:+4007 Msa1429950:CDS
AGTTACACATCGGTCGCCAA+GGG 0.575297 tig0026602:-3761 None:intergenic
GCGACATCTTAATTCATTGG+AGG 0.578935 tig0026602:+4110 Msa1429950:CDS
ATATTTCCTAGTAGTCCCCT+TGG 0.580147 tig0026602:+3745 Msa1429950:CDS
GCTTCAGGAAGTTTGTCTGG+AGG 0.581084 tig0026602:+3328 Msa1429950:CDS
GGAGAGCGCTGGGGTGAAAG+CGG 0.581203 tig0026602:-3511 None:intergenic
AAGTCACCAAGTCTTTAAAA+CGG 0.582438 tig0026602:-2352 None:intergenic
CGGTGCACCCGATGATGACG+CGG 0.583325 tig0026602:-6841 None:intergenic
ACCTGGAATACCATTAGCAT+GGG 0.584153 tig0026602:-3539 None:intergenic
ATGTCAGGAAGGCTTGGGAA+AGG 0.590197 tig0026602:-5971 None:intergenic
AGTACCTTGGATGACCGTAA+TGG 0.590692 tig0026602:-6037 None:intergenic
TACCTGGAATACCATTAGCA+TGG 0.591374 tig0026602:-3540 None:intergenic
TAAGAAAAGCAGCAAAGGTG+TGG 0.596060 tig0026602:+2914 Msa1429950:CDS
TCAGTTAAGAAAAGCAGCAA+AGG 0.596758 tig0026602:+2909 Msa1429950:intron
CAAAGTCTCGGGCTTAGGCA+AGG 0.598911 tig0026602:-4316 None:intergenic
TTCATCAATGGGAAATGGAA+CGG 0.599659 tig0026602:+1519 Msa1429950:CDS
ACGTATAATCAATGAAAACA+TGG 0.600119 tig0026602:-7186 None:intergenic
ACAACACACCAAAAGTACAA+AGG 0.600368 tig0026602:-7012 None:intergenic
GGGCCAAGTTCAACCAGAAG+TGG 0.600532 tig0026602:-5766 None:intergenic
AAGGGGCTATGTAAGAGCGG+TGG 0.601069 tig0026602:+6966 Msa1429950:three_prime_UTR
AAGTTTGATGACGTTGATGT+GGG 0.602425 tig0026602:+6765 Msa1429950:CDS
ACAAGGGTGAACTGGATGAA+AGG 0.602443 tig0026602:+3275 Msa1429950:CDS
TCCAGCGAATCCTAAATCAA+CGG 0.605434 tig0026602:+5405 Msa1429950:CDS
TCACTAATGAGAGGTTCCAT+AGG 0.605594 tig0026602:+3926 Msa1429950:CDS
CAGCAATGACTACTGCAAAG+TGG 0.609352 tig0026602:+3599 Msa1429950:CDS
GATTGTGTTTAATCTACCAA+AGG 0.610209 tig0026602:-7094 None:intergenic
TGAAGAAGCCTATCTTTCAC+CGG 0.610627 tig0026602:-4635 None:intergenic
TGATCAAATGACTCGCAACA+AGG 0.610934 tig0026602:+3258 Msa1429950:CDS
CTGGCGAATGCTGATTGCAA+CGG 0.612935 tig0026602:-4692 None:intergenic
AATCTCTCCCAAGAGAATTG+AGG 0.614354 tig0026602:+4088 Msa1429950:CDS
AGAAACCAAACATCTTCTCA+TGG 0.615290 tig0026602:+1489 Msa1429950:CDS
TGCTCTCAATATTCGACACA+AGG 0.617873 tig0026602:-1734 None:intergenic
CATCAACGTCATCAAACTTG+AGG 0.618997 tig0026602:-6761 None:intergenic
TCGCATTCAGATGCCAAACA+GGG 0.619285 tig0026602:-3041 None:intergenic
GCAACCACAATGCAAGCCAC+AGG 0.619706 tig0026602:+5618 Msa1429950:CDS
AAATGATTTGGTCAATATGG+CGG 0.620550 tig0026602:-5445 None:intergenic
CTTCACTGCTCACTAATGAG+AGG 0.621786 tig0026602:+3917 Msa1429950:CDS
AATCGCTCTAGCTCTTGTGA+CGG 0.622511 tig0026602:-3655 None:intergenic
AGCAGTCAGAATAAGTGGAA+TGG 0.624448 tig0026602:+5331 Msa1429950:CDS
ACCAGTCAACAAATACACTA+CGG 0.630000 tig0026602:-5645 None:intergenic
GATCAAATGACTCGCAACAA+GGG 0.634570 tig0026602:+3259 Msa1429950:CDS
ATACCATTAGCATGGGACGC+AGG 0.635755 tig0026602:-3532 None:intergenic
GCAGGCTTCCAGTTACACAT+CGG 0.636337 tig0026602:-3771 None:intergenic
ATATGTTGCAAAGTGAAGCA+AGG 0.636567 tig0026602:-2941 None:intergenic
TTCTCACAGTTGCTCCACCA+GGG 0.637511 tig0026602:-5786 None:intergenic
ATTGATTTCAGCTCAAAATG+GGG 0.637980 tig0026602:+4541 Msa1429950:intron
AACCAGAAGTGGCTTTACAG+AGG 0.638996 tig0026602:-5755 None:intergenic
AAAACCTGTGGCTTGCATTG+TGG 0.639151 tig0026602:-5622 None:intergenic
ACACTTCAGAAGATGAGTTG+AGG 0.642298 tig0026602:+2967 Msa1429950:CDS
GCGAATGCTGATTGCAACGG+AGG 0.644636 tig0026602:-4689 None:intergenic
AACGGCTGAAAGCATGTACA+CGG 0.644972 tig0026602:-2334 None:intergenic
AACGATGGCACTCAGATACA+CGG 0.646275 tig0026602:-2286 None:intergenic
AGATGAGTTGAGGAAAACCA+TGG 0.646677 tig0026602:+2977 Msa1429950:CDS
ACTGAGTTCATACTAGGTGT+TGG 0.651252 tig0026602:+6930 Msa1429950:three_prime_UTR
ACAATTATCTCAGCAGACAA+GGG 0.651810 tig0026602:+5364 Msa1429950:CDS
TGATTGGGAAAACAAGCTTG+AGG 0.653830 tig0026602:+1924 Msa1429950:CDS
TCAGGTTGCTCAGACTTCAA+CGG 0.653849 tig0026602:-6861 None:intergenic
ATGGCACTCAGATACACGGT+TGG 0.654011 tig0026602:-2282 None:intergenic
GGACTTATAATGGTCTTGGA+GGG 0.654210 tig0026602:-3490 None:intergenic
AAGCTATTATGCATGTGTTG+GGG 0.654231 tig0026602:+6568 Msa1429950:CDS
AGTCATTGCTGTGCTTACAG+GGG 0.657740 tig0026602:-3587 None:intergenic
TGACAGAGATATTACTAGTG+AGG 0.658106 tig0026602:+3690 Msa1429950:CDS
GACAAGGGGCTATGTAAGAG+CGG 0.675376 tig0026602:+6963 Msa1429950:three_prime_UTR
TCAACGTCATCAAACTTGAG+GGG 0.681807 tig0026602:-6759 None:intergenic
AAAGTAACCATCCAAAACGA+TGG 0.686042 tig0026602:-2301 None:intergenic
AAAGTACAAAGGGTTAGAGG+CGG 0.695687 tig0026602:-7001 None:intergenic
ATGCGAAACTGAAAACCTAG+AGG 0.696566 tig0026602:+3058 Msa1429950:CDS
GAAGCTAACAGCAAAACTGA+CGG 0.697217 tig0026602:+5823 Msa1429950:CDS
CCAGCTTTGACAACAAACTG+AGG 0.699982 tig0026602:-1874 None:intergenic
TTCAGACAGAAGAAGCAGAG+CGG 0.704544 tig0026602:+1620 Msa1429950:intron
ATTCAAACTAGACGCCAGAG+AGG 0.707328 tig0026602:-3218 None:intergenic
AATACACTACGGAAAACCTG+TGG 0.712241 tig0026602:-5634 None:intergenic
TGGGACGCAGGAGAGCGCTG+GGG 0.725559 tig0026602:-3520 None:intergenic
TGTTGCAAAGTGAAGCAAGG+AGG 0.728901 tig0026602:-2938 None:intergenic
CCAACAAAGCCGAATCCAGG+AGG 0.737425 tig0026602:+4837 Msa1429950:CDS
AGAGACATACACATTGTGTG+CGG 0.738139 tig0026602:-6014 None:intergenic
GGGATATGAGATCACCAAAG+CGG 0.738717 tig0026602:+4561 Msa1429950:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTTATTTTATTTTTGC+AGG + tig0026602:2129-2148 Msa1429950:intron 10.0%
!!! TTTATTTGTTATAATTTCTT+TGG + tig0026602:6062-6081 Msa1429950:intron 10.0%
!! TAAAAAGAATAATAACTTAA+AGG - tig0026602:6228-6247 None:intergenic 10.0%
!! GTATATAATCACAATTAATT+TGG - tig0026602:1985-2004 None:intergenic 15.0%
!! CACATTTACTTATAATTATA+AGG + tig0026602:2827-2846 Msa1429950:intron 15.0%
!!! TATAATTTTTTGTACTTCTA+TGG + tig0026602:4390-4409 Msa1429950:intron 15.0%
!! GTTCATAAAATAACATTATT+GGG - tig0026602:5128-5147 None:intergenic 15.0%
!! AGTTCATAAAATAACATTAT+TGG - tig0026602:5129-5148 None:intergenic 15.0%
!!! TTATTCTTTTTATTTCACTT+TGG + tig0026602:6236-6255 Msa1429950:intron 15.0%
!! ATAAAAACTTCAATGACAAA+TGG - tig0026602:1574-1593 None:intergenic 20.0%
!!! AGTTTTTATTTGAATTCATG+AGG + tig0026602:1585-1604 Msa1429950:intron 20.0%
!!! TTATTTTATACTCTATCAAG+AGG + tig0026602:1656-1675 Msa1429950:CDS 20.0%
!!! TAAGTATATAACTGATTTGA+AGG - tig0026602:2016-2035 None:intergenic 20.0%
!!! TATTTTATTTTTGCAGGATA+AGG + tig0026602:2135-2154 Msa1429950:intron 20.0%
!!! TTTCTTTTCGCATAAATATT+AGG + tig0026602:2474-2493 Msa1429950:intron 20.0%
!! TTCAATTATTCCATTATTTC+TGG + tig0026602:2595-2614 Msa1429950:intron 20.0%
!! AAACAATTTCTTATTGTTCT+TGG + tig0026602:2641-2660 Msa1429950:intron 20.0%
!! TATTCTAATTATTCATGTTC+CGG + tig0026602:2680-2699 Msa1429950:CDS 20.0%
!! TAACAATATAATCAAAATGC+AGG - tig0026602:2769-2788 None:intergenic 20.0%
!!! TTGTTATTGTTCTATATCTT+AGG + tig0026602:2783-2802 Msa1429950:intron 20.0%
!! TGTTATTGTTCTATATCTTA+GGG + tig0026602:2784-2803 Msa1429950:intron 20.0%
!!! ATAATTATAAGGTATTACAG+TGG + tig0026602:2838-2857 Msa1429950:intron 20.0%
!!! TTAACTGAAGAAATTTTGAA+TGG - tig0026602:2897-2916 None:intergenic 20.0%
!! TATATCTGCTACTAAATTAT+TGG - tig0026602:3009-3028 None:intergenic 20.0%
!!! ATCGTATTTTAAAACCAAAT+GGG - tig0026602:4939-4958 None:intergenic 20.0%
!! TATGTAAATGAAAGTAACTT+GGG - tig0026602:5862-5881 None:intergenic 20.0%
!! TAACAAATAAATTAGTACCT+TGG - tig0026602:6053-6072 None:intergenic 20.0%
!! TTTCTATTTCAAATAGATAC+TGG - tig0026602:6169-6188 None:intergenic 20.0%
!! ATCCAACATTTGTAATTTAA+GGG - tig0026602:6287-6306 None:intergenic 20.0%
!! ACAAGTACAATTCAAAAATT+AGG - tig0026602:6676-6695 None:intergenic 20.0%
!! AATGGAAACAGAATAAAATA+AGG - tig0026602:6714-6733 None:intergenic 20.0%
!!! AACAATAAAATGTTTTCCTT+TGG + tig0026602:7078-7097 Msa1429950:three_prime_UTR 20.0%
!!! CAATCTTTCTCATTTTTAAA+AGG + tig0026602:7112-7131 Msa1429950:three_prime_UTR 20.0%
!!! AAAACTCTAAGACTAGATAA+AGG - tig0026602:1783-1802 None:intergenic 25.0%
! AACATAGCAACATAAAAGAT+TGG - tig0026602:2040-2059 None:intergenic 25.0%
! TATGTTGCTATGTTTATATC+AGG + tig0026602:2046-2065 Msa1429950:intron 25.0%
! TTTACATCTTACAACTTTGA+TGG + tig0026602:2182-2201 Msa1429950:intron 25.0%
! CATGATAGAAATTAAACCAT+TGG - tig0026602:2381-2400 None:intergenic 25.0%
!! CAATGGTTTAATTTCTATCA+TGG + tig0026602:2379-2398 Msa1429950:CDS 25.0%
!!! CTTTTAGTCTTTTTCACTAA+TGG + tig0026602:2423-2442 Msa1429950:intron 25.0%
! ATTAGGATAAATTCAGTCAT+TGG + tig0026602:2491-2510 Msa1429950:intron 25.0%
! AGTATTACAACCAGAAATAA+TGG - tig0026602:2608-2627 None:intergenic 25.0%
! ATATAATCAAAATGCAGGAA+GGG - tig0026602:2764-2783 None:intergenic 25.0%
! AATATAATCAAAATGCAGGA+AGG - tig0026602:2765-2784 None:intergenic 25.0%
! TGATGCATAGAATGATAAAA+GGG - tig0026602:3111-3130 None:intergenic 25.0%
! TTATTATTGCACTTTGTAGA+TGG + tig0026602:3163-3182 Msa1429950:intron 25.0%
! TGAAAGGTTATTCATTAATG+AGG + tig0026602:3291-3310 Msa1429950:CDS 25.0%
! TAGATATTATCTTCACAAGA+CGG - tig0026602:3419-3438 None:intergenic 25.0%
! ATTGCAATTTCATCTAATGA+TGG - tig0026602:4255-4274 None:intergenic 25.0%
! ATAAAAGAGAATCATTTACC+AGG - tig0026602:4342-4361 None:intergenic 25.0%
!! TAATTGATTTCAGCTCAAAA+TGG + tig0026602:4539-4558 Msa1429950:intron 25.0%
!! AATTGATTTCAGCTCAAAAT+GGG + tig0026602:4540-4559 Msa1429950:intron 25.0%
!!! GATCGTATTTTAAAACCAAA+TGG - tig0026602:4940-4959 None:intergenic 25.0%
! ATATGACATAGTCTTCTATA+AGG + tig0026602:4970-4989 Msa1429950:intron 25.0%
! TATGACATAGTCTTCTATAA+GGG + tig0026602:4971-4990 Msa1429950:intron 25.0%
!! AATACATTTTCACACCAAAA+GGG - tig0026602:5046-5065 None:intergenic 25.0%
!! TAATACATTTTCACACCAAA+AGG - tig0026602:5047-5066 None:intergenic 25.0%
! TATTACCTATTTGTTCAATG+TGG + tig0026602:5062-5081 Msa1429950:intron 25.0%
! CTTAACAATCTAGAAAACAT+AGG - tig0026602:5306-5325 None:intergenic 25.0%
!! TGTTTTCTAGATTGTTAAGT+TGG + tig0026602:5307-5326 Msa1429950:intron 25.0%
!! GTTTTCTAGATTGTTAAGTT+GGG + tig0026602:5308-5327 Msa1429950:intron 25.0%
!!! ACAAAATGATTTGGTCAATA+TGG - tig0026602:5451-5470 None:intergenic 25.0%
! ATATAATCTCCCTAAAAGTT+AGG - tig0026602:5585-5604 None:intergenic 25.0%
! ATGTAAATGAAAGTAACTTG+GGG - tig0026602:5861-5880 None:intergenic 25.0%
! GTATGTAAATGAAAGTAACT+TGG - tig0026602:5863-5882 None:intergenic 25.0%
!! TAGAAAATTGTTTTCTTTCC+AGG + tig0026602:6183-6202 Msa1429950:intron 25.0%
! TTTAAGGGAGAAAAATGAAA+CGG - tig0026602:6272-6291 None:intergenic 25.0%
! CATCCAACATTTGTAATTTA+AGG - tig0026602:6288-6307 None:intergenic 25.0%
!! TGAGAATAAGTCATTCATTT+TGG - tig0026602:6427-6446 None:intergenic 25.0%
! TAGAGCATAATTGTATTCAT+TGG + tig0026602:6498-6517 Msa1429950:intron 25.0%
!!! TAGTTTTTAGTGCAAATTGT+AGG + tig0026602:7035-7054 Msa1429950:three_prime_UTR 25.0%
! ACGTATAATCAATGAAAACA+TGG - tig0026602:7189-7208 None:intergenic 25.0%
!!! TTTTCATTGATTATACGTGT+TGG + tig0026602:7191-7210 Msa1429950:three_prime_UTR 25.0%
ATGGCAAATGTTTCATCAAT+GGG + tig0026602:1508-1527 Msa1429950:CDS 30.0%
AATGTTTCATCAATGGGAAA+TGG + tig0026602:1514-1533 Msa1429950:CDS 30.0%
AAAGAAGAGATTGAGAATAC+TGG + tig0026602:1706-1725 Msa1429950:CDS 30.0%
!! TAGTCTTAGAGTTTTCAGTT+TGG + tig0026602:1788-1807 Msa1429950:intron 30.0%
! CCAATTTTAAGCAATCGATT+CGG + tig0026602:1898-1917 Msa1429950:CDS 30.0%
AAATACACGCTTATAATACC+TGG - tig0026602:2210-2229 None:intergenic 30.0%
!!! TTTTGGATGGTTACTTTTCT+TGG + tig0026602:2307-2326 Msa1429950:CDS 30.0%
! AAGTCACCAAGTCTTTAAAA+CGG - tig0026602:2355-2374 None:intergenic 30.0%
AAAGATATGAAACCACTTCA+TGG - tig0026602:2454-2473 None:intergenic 30.0%
!! TTCTGGTTGTAATACTTTTG+AGG + tig0026602:2612-2631 Msa1429950:intron 30.0%
!!! TTGTAATACTTTTGAGGTGA+AGG + tig0026602:2618-2637 Msa1429950:intron 30.0%
! TTTTCGGAATTTCAACATTC+AGG + tig0026602:2707-2726 Msa1429950:CDS 30.0%
TATAATCAAAATGCAGGAAG+GGG - tig0026602:2763-2782 None:intergenic 30.0%
! ATTATAAGGTATTACAGTGG+TGG + tig0026602:2841-2860 Msa1429950:intron 30.0%
! TTATAAGGTATTACAGTGGT+GGG + tig0026602:2842-2861 Msa1429950:intron 30.0%
!! AACCTAGAGGATTTTGATAA+AGG + tig0026602:3071-3090 Msa1429950:CDS 30.0%
AACCTTTATCAAAATCCTCT+AGG - tig0026602:3076-3095 None:intergenic 30.0%
ATAGAATGATAAAAGGGCAA+AGG - tig0026602:3105-3124 None:intergenic 30.0%
CTGATGCATAGAATGATAAA+AGG - tig0026602:3112-3131 None:intergenic 30.0%
! CTTTTATCATTCTATGCATC+AGG + tig0026602:3110-3129 Msa1429950:intron 30.0%
CAGTTAAAGACATCATATGT+TGG - tig0026602:3139-3158 None:intergenic 30.0%
!! GACCTATTTTAAAGATCTCA+TGG + tig0026602:3189-3208 Msa1429950:CDS 30.0%
!! CTCCATGAGATCTTTAAAAT+AGG - tig0026602:3194-3213 None:intergenic 30.0%
!! CTATTTTAAAGATCTCATGG+AGG + tig0026602:3192-3211 Msa1429950:CDS 30.0%
CAATCTCATGGACAATATAT+GGG + tig0026602:3801-3820 Msa1429950:CDS 30.0%
AAGCCATGAAGTTATACTAT+AGG + tig0026602:3842-3861 Msa1429950:CDS 30.0%
CAACCTATAGTATAACTTCA+TGG - tig0026602:3848-3867 None:intergenic 30.0%
GAAGTTATACTATAGGTTGT+TGG + tig0026602:3849-3868 Msa1429950:CDS 30.0%
ATTTCATCTAATGATGGCAT+TGG - tig0026602:4249-4268 None:intergenic 30.0%
ATGCATATTAACTTCTCTTG+TGG + tig0026602:4273-4292 Msa1429950:CDS 30.0%
!! TTTCAACATGTGCTATTTGT+GGG - tig0026602:4481-4500 None:intergenic 30.0%
!! GTTGATAGATGTGTTACTTA+AGG - tig0026602:4519-4538 None:intergenic 30.0%
! ATTGATTTCAGCTCAAAATG+GGG + tig0026602:4541-4560 Msa1429950:intron 30.0%
!! AGAGAATCGAAATGTTTTAG+CGG + tig0026602:4592-4611 Msa1429950:CDS 30.0%
! ACGAAATTCTTTTACTTCAC+CGG + tig0026602:4616-4635 Msa1429950:CDS 30.0%
! ATTTTTCACCACTTTACTGT+TGG + tig0026602:4769-4788 Msa1429950:intron 30.0%
! TTTGATAACTTTCTAGACAC+TGG + tig0026602:4998-5017 Msa1429950:intron 30.0%
TCTTTCCACATTGAACAAAT+AGG - tig0026602:5070-5089 None:intergenic 30.0%
ATAACATTATTGGGTCACAA+AGG - tig0026602:5119-5138 None:intergenic 30.0%
ACTGTATGTGTTTGTCTATA+AGG + tig0026602:5149-5168 Msa1429950:intron 30.0%
CATCAGCATAAAATTACTCA+TGG - tig0026602:5192-5211 None:intergenic 30.0%
! CATGAGTAATTTTATGCTGA+TGG + tig0026602:5190-5209 Msa1429950:intron 30.0%
!! AAATGATTTGGTCAATATGG+CGG - tig0026602:5448-5467 None:intergenic 30.0%
AGAAGCAACACAAAATGATT+TGG - tig0026602:5460-5479 None:intergenic 30.0%
!!! ATCATTTTGTGTTGCTTCTA+TGG + tig0026602:5461-5480 Msa1429950:CDS 30.0%
! ACAACTGAACCTAACTTTTA+GGG + tig0026602:5573-5592 Msa1429950:CDS 30.0%
! ATCCAGGATTTTGAACTAAA+TGG - tig0026602:5937-5956 None:intergenic 30.0%
! GACTATTTTGTCTGAGAAAA+TGG + tig0026602:6084-6103 Msa1429950:intron 30.0%
! TTTTGTCTGAGAAAATGGAT+AGG + tig0026602:6089-6108 Msa1429950:intron 30.0%
TTTGTCTGAGAAAATGGATA+GGG + tig0026602:6090-6109 Msa1429950:intron 30.0%
CTCCCTTAAATTACAAATGT+TGG + tig0026602:6282-6301 Msa1429950:intron 30.0%
ATTACAAATGTTGGATGCTT+TGG + tig0026602:6291-6310 Msa1429950:intron 30.0%
CTGTTGTAACTTGGTTAAAA+TGG - tig0026602:6341-6360 None:intergenic 30.0%
TTAACCAAGTTACAACAGTT+AGG + tig0026602:6343-6362 Msa1429950:intron 30.0%
!! AGTCATTCATTTTGGCAATT+AGG - tig0026602:6419-6438 None:intergenic 30.0%
TATGTATCTCAATTAGATGC+TGG - tig0026602:6466-6485 None:intergenic 30.0%
! AACACATGCATAATAGCTTT+TGG - tig0026602:6567-6586 None:intergenic 30.0%
AAAAGCTATTATGCATGTGT+TGG + tig0026602:6566-6585 Msa1429950:CDS 30.0%
AAAGCTATTATGCATGTGTT+GGG + tig0026602:6567-6586 Msa1429950:CDS 30.0%
TCAAAAATTAGGACAGAAAG+AGG - tig0026602:6665-6684 None:intergenic 30.0%
CATCATTCAATTTAAGAGTC+AGG - tig0026602:6882-6901 None:intergenic 30.0%
GATTGTGTTTAATCTACCAA+AGG - tig0026602:7097-7116 None:intergenic 30.0%
GAAAAGCTGTAAAGAAGCAA+TGG + tig0026602:1456-1475 Msa1429950:CDS 35.0%
AAAGAAGCAATGGATCTGTT+TGG + tig0026602:1466-1485 Msa1429950:CDS 35.0%
AGAAACCAAACATCTTCTCA+TGG + tig0026602:1489-1508 Msa1429950:CDS 35.0%
ATTTGCCATGAGAAGATGTT+TGG - tig0026602:1497-1516 None:intergenic 35.0%
CATGGCAAATGTTTCATCAA+TGG + tig0026602:1507-1526 Msa1429950:CDS 35.0%
TTCATCAATGGGAAATGGAA+CGG + tig0026602:1519-1538 Msa1429950:CDS 35.0%
CCGAATCGATTGCTTAAAAT+TGG - tig0026602:1901-1920 None:intergenic 35.0%
AAAGTAACCATCCAAAACGA+TGG - tig0026602:2304-2323 None:intergenic 35.0%
!!! TTTCAGCCGTTTTAAAGACT+TGG + tig0026602:2346-2365 Msa1429950:CDS 35.0%
CTAATGGAATATCCATGAAG+TGG + tig0026602:2439-2458 Msa1429950:intron 35.0%
TGTTCTATATCTTAGGGACA+TGG + tig0026602:2790-2809 Msa1429950:intron 35.0%
TCAGTTAAGAAAAGCAGCAA+AGG + tig0026602:2909-2928 Msa1429950:intron 35.0%
ATATGTTGCAAAGTGAAGCA+AGG - tig0026602:2944-2963 None:intergenic 35.0%
!! TAAATTATTGGCTTGCTCCA+TGG - tig0026602:2997-3016 None:intergenic 35.0%
! CTATTGATTGTGTTCTGTAG+AGG + tig0026602:3446-3465 Msa1429950:intron 35.0%
ATCTTTGAATTTGTGCTACC+TGG - tig0026602:3559-3578 None:intergenic 35.0%
TGACAGAGATATTACTAGTG+AGG + tig0026602:3690-3709 Msa1429950:CDS 35.0%
CCATATATTGTCCATGAGAT+TGG - tig0026602:3803-3822 None:intergenic 35.0%
CCAATCTCATGGACAATATA+TGG + tig0026602:3800-3819 Msa1429950:CDS 35.0%
! AACAGCTTTTGATCTTAGCA+AGG + tig0026602:4038-4057 Msa1429950:CDS 35.0%
!! ATCTAATGATGGCATTGGTT+CGG - tig0026602:4244-4263 None:intergenic 35.0%
CATATTAACTTCTCTTGTGG+AGG + tig0026602:4276-4295 Msa1429950:CDS 35.0%
!! CTTTCAACATGTGCTATTTG+TGG - tig0026602:4482-4501 None:intergenic 35.0%
!!! GTGGGAGTAGTTTTGATTTA+AGG - tig0026602:4670-4689 None:intergenic 35.0%
!! AGAGTACTGTTATACCCATT+TGG + tig0026602:4922-4941 Msa1429950:intron 35.0%
AACTTTCTAGACACTGGAAT+TGG + tig0026602:5004-5023 Msa1429950:intron 35.0%
ACTTTCTAGACACTGGAATT+GGG + tig0026602:5005-5024 Msa1429950:intron 35.0%
GAATAAGTGGAATGGTTGAA+AGG + tig0026602:5339-5358 Msa1429950:CDS 35.0%
TACAATTATCTCAGCAGACA+AGG + tig0026602:5363-5382 Msa1429950:CDS 35.0%
ACAATTATCTCAGCAGACAA+GGG + tig0026602:5364-5383 Msa1429950:CDS 35.0%
! CACAACTGAACCTAACTTTT+AGG + tig0026602:5572-5591 Msa1429950:CDS 35.0%
ACCAGTCAACAAATACACTA+CGG - tig0026602:5648-5667 None:intergenic 35.0%
AGAGTAAACCAAATGTGTCA+CGG - tig0026602:5907-5926 None:intergenic 35.0%
! ACATTTGGTTTACTCTTTGC+AGG + tig0026602:5911-5930 Msa1429950:intron 35.0%
ATGTGTATGTCTCTCCATTA+CGG + tig0026602:6023-6042 Msa1429950:CDS 35.0%
CCAAAAGTTGTAATTTAGCC+TGG - tig0026602:6204-6223 None:intergenic 35.0%
! CCAGGCTAAATTACAACTTT+TGG + tig0026602:6201-6220 Msa1429950:intron 35.0%
AGTTCCTAACTGTTGTAACT+TGG - tig0026602:6350-6369 None:intergenic 35.0%
GTTACAACAGTTAGGAACTT+TGG + tig0026602:6351-6370 Msa1429950:intron 35.0%
AAGCTATTATGCATGTGTTG+GGG + tig0026602:6568-6587 Msa1429950:CDS 35.0%
CCTGTTTAACCGATTGTTTA+TGG - tig0026602:6636-6655 None:intergenic 35.0%
CCATAAACAATCGGTTAAAC+AGG + tig0026602:6633-6652 Msa1429950:CDS 35.0%
!! TGTTTCCATTTTTCAGCAAC+CGG + tig0026602:6724-6743 Msa1429950:intron 35.0%
ATCAACGTCATCAAACTTGA+GGG - tig0026602:6763-6782 None:intergenic 35.0%
!! AAGTTTGATGACGTTGATGT+GGG + tig0026602:6765-6784 Msa1429950:CDS 35.0%
TCTGATACTGAGTTCATACT+AGG + tig0026602:6924-6943 Msa1429950:three_prime_UTR 35.0%
! CAACACACCAAAAGTACAAA+GGG - tig0026602:7014-7033 None:intergenic 35.0%
! ACAACACACCAAAAGTACAA+AGG - tig0026602:7015-7034 None:intergenic 35.0%
TGCTCTCAATATTCGACACA+AGG - tig0026602:1737-1756 None:intergenic 40.0%
TGATTGGGAAAACAAGCTTG+AGG + tig0026602:1924-1943 Msa1429950:CDS 40.0%
! GTTCTTGGTGTATCTGTTAC+AGG + tig0026602:2656-2675 Msa1429950:intron 40.0%
TTGAAATTCCGAAAACGAGC+CGG - tig0026602:2702-2721 None:intergenic 40.0%
TAAGAAAAGCAGCAAAGGTG+TGG + tig0026602:2914-2933 Msa1429950:CDS 40.0%
ACACTTCAGAAGATGAGTTG+AGG + tig0026602:2967-2986 Msa1429950:CDS 40.0%
! AGATGAGTTGAGGAAAACCA+TGG + tig0026602:2977-2996 Msa1429950:CDS 40.0%
ATGCGAAACTGAAAACCTAG+AGG + tig0026602:3058-3077 Msa1429950:CDS 40.0%
TGATCAAATGACTCGCAACA+AGG + tig0026602:3258-3277 Msa1429950:CDS 40.0%
GATCAAATGACTCGCAACAA+GGG + tig0026602:3259-3278 Msa1429950:CDS 40.0%
! GGACTTATAATGGTCTTGGA+GGG - tig0026602:3493-3512 None:intergenic 40.0%
! AAGCGGACTTATAATGGTCT+TGG - tig0026602:3497-3516 None:intergenic 40.0%
ACCTGGAATACCATTAGCAT+GGG - tig0026602:3542-3561 None:intergenic 40.0%
TACCTGGAATACCATTAGCA+TGG - tig0026602:3543-3562 None:intergenic 40.0%
TAGTCATTGCTGTGCTTACA+GGG - tig0026602:3591-3610 None:intergenic 40.0%
ATATTTCCTAGTAGTCCCCT+TGG + tig0026602:3745-3764 Msa1429950:CDS 40.0%
GGCTTCTAATCTTCGTTGTT+CGG - tig0026602:3827-3846 None:intergenic 40.0%
CAAGTATTTGAGCTTCTGCT+CGG - tig0026602:3885-3904 None:intergenic 40.0%
TCACTAATGAGAGGTTCCAT+AGG + tig0026602:3926-3945 Msa1429950:CDS 40.0%
AACATGCAAGCATACACCTA+TGG - tig0026602:3945-3964 None:intergenic 40.0%
ATGTTCTGCAGAATTAGTCC+TGG + tig0026602:3960-3979 Msa1429950:CDS 40.0%
AATCTCTCCCAAGAGAATTG+AGG + tig0026602:4088-4107 Msa1429950:CDS 40.0%
GAGGCGACATCTTAATTCAT+TGG + tig0026602:4107-4126 Msa1429950:CDS 40.0%
GCGACATCTTAATTCATTGG+AGG + tig0026602:4110-4129 Msa1429950:CDS 40.0%
! TTCATTGGAGGAACGACTTT+TGG + tig0026602:4122-4141 Msa1429950:CDS 40.0%
!! ACTTTTGGAGAGCTTGGTAT+GGG + tig0026602:4137-4156 Msa1429950:CDS 40.0%
! CCGATTGATTTCTGCAGAAA+GGG - tig0026602:4208-4227 None:intergenic 40.0%
CCCTTTCTGCAGAAATCAAT+CGG + tig0026602:4205-4224 Msa1429950:CDS 40.0%
TCATTTACCAGGCAAAGTCT+CGG - tig0026602:4331-4350 None:intergenic 40.0%
GGGATTCGTAGAAAGAATGA+AGG - tig0026602:4457-4476 None:intergenic 40.0%
!! AACATGTGCTATTTGTGGGA+GGG - tig0026602:4477-4496 None:intergenic 40.0%
TTACTTCACCGGTGAAAGAT+AGG + tig0026602:4627-4646 Msa1429950:CDS 40.0%
TGAAGAAGCCTATCTTTCAC+CGG - tig0026602:4638-4657 None:intergenic 40.0%
AGACTCATCAGACTTATACC+TGG - tig0026602:4714-4733 None:intergenic 40.0%
GAGAAACATGTGCAGAAACT+GGG + tig0026602:4865-4884 Msa1429950:CDS 40.0%
!!! GATCAGCGTCTTTTTTAGCA+AGG + tig0026602:4887-4906 Msa1429950:CDS 40.0%
TGGGTATAACAGTACTCTCA+AGG - tig0026602:4920-4939 None:intergenic 40.0%
AGCAGTCAGAATAAGTGGAA+TGG + tig0026602:5331-5350 Msa1429950:CDS 40.0%
TCCAGCGAATCCTAAATCAA+CGG + tig0026602:5405-5424 Msa1429950:CDS 40.0%
!! AGAGAGATGTCCGTTGATTT+AGG - tig0026602:5418-5437 None:intergenic 40.0%
TTGCTTCTATGGAGTAGCAA+AGG + tig0026602:5472-5491 Msa1429950:CDS 40.0%
AATACACTACGGAAAACCTG+TGG - tig0026602:5637-5656 None:intergenic 40.0%
! TCCGTAGTGTATTTGTTGAC+TGG + tig0026602:5644-5663 Msa1429950:CDS 40.0%
!!! TCAGTTTTGCTGTTAGCTTC+GGG - tig0026602:5823-5842 None:intergenic 40.0%
!!! GTCAGTTTTGCTGTTAGCTT+CGG - tig0026602:5824-5843 None:intergenic 40.0%
GAAGCTAACAGCAAAACTGA+CGG + tig0026602:5823-5842 Msa1429950:CDS 40.0%
! GGCCATTTAGTTCAAAATCC+TGG + tig0026602:5932-5951 Msa1429950:intron 40.0%
!!! ACTTTTTTAGGGGACATGTC+AGG - tig0026602:5989-6008 None:intergenic 40.0%
AGAGACATACACATTGTGTG+CGG - tig0026602:6017-6036 None:intergenic 40.0%
CTGAGAAAATGGATAGGGAA+AGG + tig0026602:6095-6114 Msa1429950:intron 40.0%
AGAAAATGGATAGGGAAAGG+AGG + tig0026602:6098-6117 Msa1429950:intron 40.0%
GAAAATGGATAGGGAAAGGA+GGG + tig0026602:6099-6118 Msa1429950:intron 40.0%
ACCTGACTGCCATAAACAAT+CGG + tig0026602:6624-6643 Msa1429950:CDS 40.0%
ACTTTCCGGTTGCTGAAAAA+TGG - tig0026602:6732-6751 None:intergenic 40.0%
TCAACGTCATCAAACTTGAG+GGG - tig0026602:6762-6781 None:intergenic 40.0%
CATCAACGTCATCAAACTTG+AGG - tig0026602:6764-6783 None:intergenic 40.0%
!! CAAGTTTGATGACGTTGATG+TGG + tig0026602:6764-6783 Msa1429950:CDS 40.0%
AACTTCCATTCTGCAGATAG+AGG - tig0026602:6821-6840 None:intergenic 40.0%
ACTGAGTTCATACTAGGTGT+TGG + tig0026602:6930-6949 Msa1429950:three_prime_UTR 40.0%
!!! TGTTGGTGGTTTTTGAGACA+AGG + tig0026602:6947-6966 Msa1429950:three_prime_UTR 40.0%
!!! GTTGGTGGTTTTTGAGACAA+GGG + tig0026602:6948-6967 Msa1429950:three_prime_UTR 40.0%
!!! TTGGTGGTTTTTGAGACAAG+GGG + tig0026602:6949-6968 Msa1429950:three_prime_UTR 40.0%
AAAGTACAAAGGGTTAGAGG+CGG - tig0026602:7004-7023 None:intergenic 40.0%
! CCAAAAGTACAAAGGGTTAG+AGG - tig0026602:7007-7026 None:intergenic 40.0%
! CCTCTAACCCTTTGTACTTT+TGG + tig0026602:7004-7023 Msa1429950:three_prime_UTR 40.0%
GTTGCAGAATGAGCTAGCAT+TGG + tig0026602:1429-1448 Msa1429950:CDS 45.0%
TTCAGACAGAAGAAGCAGAG+CGG + tig0026602:1620-1639 Msa1429950:intron 45.0%
! GAGGCTGACTCAGAAAAATG+AGG + tig0026602:1675-1694 Msa1429950:CDS 45.0%
! CCAGCTTTGACAACAAACTG+AGG - tig0026602:1877-1896 None:intergenic 45.0%
!! CCTCAGTTTGTTGTCAAAGC+TGG + tig0026602:1874-1893 Msa1429950:CDS 45.0%
!! CAATCGATTCGGCTCTGATT+GGG + tig0026602:1909-1928 Msa1429950:CDS 45.0%
!! CTTACAACTTTGATGGTGCC+AGG + tig0026602:2189-2208 Msa1429950:intron 45.0%
AACGATGGCACTCAGATACA+CGG - tig0026602:2289-2308 None:intergenic 45.0%
! GTATCTGAGTGCCATCGTTT+TGG + tig0026602:2290-2309 Msa1429950:CDS 45.0%
! AACGGCTGAAAGCATGTACA+CGG - tig0026602:2337-2356 None:intergenic 45.0%
!! TTCATGTTCCGGCTCGTTTT+CGG + tig0026602:2691-2710 Msa1429950:CDS 45.0%
!! TACAGTGGTGGGCTTAAATG+TGG + tig0026602:2853-2872 Msa1429950:intron 45.0%
TGTTGCAAAGTGAAGCAAGG+AGG - tig0026602:2941-2960 None:intergenic 45.0%
ATTGAAGAAGACGCCCTGTT+TGG + tig0026602:3028-3047 Msa1429950:CDS 45.0%
TCGCATTCAGATGCCAAACA+GGG - tig0026602:3044-3063 None:intergenic 45.0%
TTCGCATTCAGATGCCAAAC+AGG - tig0026602:3045-3064 None:intergenic 45.0%
ATTCAAACTAGACGCCAGAG+AGG - tig0026602:3221-3240 None:intergenic 45.0%
ACAAGGGTGAACTGGATGAA+AGG + tig0026602:3275-3294 Msa1429950:CDS 45.0%
ACAAACTTCCTGAAGCTAGC+AGG - tig0026602:3324-3343 None:intergenic 45.0%
CTAGCTTCAGGAAGTTTGTC+TGG + tig0026602:3325-3344 Msa1429950:CDS 45.0%
! AGTTTCAGCAGGAGGTGTAA+AGG + tig0026602:3357-3376 Msa1429950:CDS 45.0%
! CGGACTTATAATGGTCTTGG+AGG - tig0026602:3494-3513 None:intergenic 45.0%
! GGGTGAAAGCGGACTTATAA+TGG - tig0026602:3503-3522 None:intergenic 45.0%
TCCCATGCTAATGGTATTCC+AGG + tig0026602:3538-3557 Msa1429950:CDS 45.0%
AGTCATTGCTGTGCTTACAG+GGG - tig0026602:3590-3609 None:intergenic 45.0%
GTAGTCATTGCTGTGCTTAC+AGG - tig0026602:3592-3611 None:intergenic 45.0%
CAGCAATGACTACTGCAAAG+TGG + tig0026602:3599-3618 Msa1429950:CDS 45.0%
!! AATCGCTCTAGCTCTTGTGA+CGG - tig0026602:3658-3677 None:intergenic 45.0%
CGAGCAGAAGCTCAAATACT+TGG + tig0026602:3883-3902 Msa1429950:CDS 45.0%
CTTCACTGCTCACTAATGAG+AGG + tig0026602:3917-3936 Msa1429950:CDS 45.0%
TGTTTCCTGCTGTACTTGAG+AGG + tig0026602:4007-4026 Msa1429950:CDS 45.0%
GATGTCGCCTCAATTCTCTT+GGG - tig0026602:4098-4117 None:intergenic 45.0%
AGATGTCGCCTCAATTCTCT+TGG - tig0026602:4099-4118 None:intergenic 45.0%
!! GACTTTTGGAGAGCTTGGTA+TGG + tig0026602:4136-4155 Msa1429950:CDS 45.0%
GAGAGCTTGGTATGGGAAAA+AGG + tig0026602:4144-4163 Msa1429950:CDS 45.0%
TTGATTTCTGCAGAAAGGGC+AGG - tig0026602:4204-4223 None:intergenic 45.0%
! GCCGATTGATTTCTGCAGAA+AGG - tig0026602:4209-4228 None:intergenic 45.0%
CATTTACCAGGCAAAGTCTC+GGG - tig0026602:4330-4349 None:intergenic 45.0%
!! CAACATGTGCTATTTGTGGG+AGG - tig0026602:4478-4497 None:intergenic 45.0%
GGGATATGAGATCACCAAAG+CGG + tig0026602:4561-4580 Msa1429950:CDS 45.0%
CAAGTGCACCAACAGTAAAG+TGG - tig0026602:4780-4799 None:intergenic 45.0%
CACTTTACTGTTGGTGCACT+TGG + tig0026602:4778-4797 Msa1429950:intron 45.0%
GGAGAAACATGTGCAGAAAC+TGG + tig0026602:4864-4883 Msa1429950:CDS 45.0%
TTCTAGACACTGGAATTGGG+TGG + tig0026602:5008-5027 Msa1429950:intron 45.0%
TCTAGACACTGGAATTGGGT+GGG + tig0026602:5009-5028 Msa1429950:intron 45.0%
! GGGCTCAAATCAAACCCTTT+TGG + tig0026602:5029-5048 Msa1429950:intron 45.0%
TTGGGAGCAGTCAGAATAAG+TGG + tig0026602:5326-5345 Msa1429950:CDS 45.0%
!! TCCGTTGATTTAGGATTCGC+TGG - tig0026602:5409-5428 None:intergenic 45.0%
! AAAACCTGTGGCTTGCATTG+TGG - tig0026602:5625-5644 None:intergenic 45.0%
! TGTATTTGTTGACTGGTCGC+CGG + tig0026602:5651-5670 Msa1429950:CDS 45.0%
! TATGTCTAGCTCCCCCATTA+CGG - tig0026602:5681-5700 None:intergenic 45.0%
AGCTAGACATAGAACAGGAC+AGG + tig0026602:5690-5709 Msa1429950:CDS 45.0%
! ACCAGAAGTGGCTTTACAGA+GGG - tig0026602:5757-5776 None:intergenic 45.0%
! AACCAGAAGTGGCTTTACAG+AGG - tig0026602:5758-5777 None:intergenic 45.0%
! AAGCCACTTCTGGTTGAACT+TGG + tig0026602:5763-5782 Msa1429950:CDS 45.0%
CTTGGGAAAGGCGATATTCT+AGG - tig0026602:5962-5981 None:intergenic 45.0%
!! TTTTAGGGGACATGTCAGGA+AGG - tig0026602:5985-6004 None:intergenic 45.0%
!!! TGCGGCAGACACTTTTTTAG+GGG - tig0026602:5999-6018 None:intergenic 45.0%
!!! GTGCGGCAGACACTTTTTTA+GGG - tig0026602:6000-6019 None:intergenic 45.0%
!!! TGTGCGGCAGACACTTTTTT+AGG - tig0026602:6001-6020 None:intergenic 45.0%
AGTACCTTGGATGACCGTAA+TGG - tig0026602:6040-6059 None:intergenic 45.0%
GTTATGTATGTGCGTGCAGA+TGG + tig0026602:6520-6539 Msa1429950:intron 45.0%
!! GTCTTTTGAAGGGCTCTGAT+AGG - tig0026602:6606-6625 None:intergenic 45.0%
! TGGCAGTCAGGTCTTTTGAA+GGG - tig0026602:6616-6635 None:intergenic 45.0%
! ATGGCAGTCAGGTCTTTTGA+AGG - tig0026602:6617-6636 None:intergenic 45.0%
ACCGATTGTTTATGGCAGTC+AGG - tig0026602:6628-6647 None:intergenic 45.0%
TTCAGCAACCGGAAAGTAAG+AGG + tig0026602:6735-6754 Msa1429950:intron 45.0%
AACAGCCTCTATCTGCAGAA+TGG + tig0026602:6813-6832 Msa1429950:CDS 45.0%
! TCAGGTTGCTCAGACTTCAA+CGG - tig0026602:6864-6883 None:intergenic 45.0%
!! GAGTTCATACTAGGTGTTGG+TGG + tig0026602:6933-6952 Msa1429950:three_prime_UTR 45.0%
!! AAAATAAAATAAAATATACT+GGG - tig0026602:2126-2145 None:intergenic 5.0%
!! AAAAATAAAATAAAATATAC+TGG - tig0026602:2127-2146 None:intergenic 5.0%
!! GCAATCGATTCGGCTCTGAT+TGG + tig0026602:1908-1927 Msa1429950:CDS 50.0%
ATGGCACTCAGATACACGGT+TGG - tig0026602:2285-2304 None:intergenic 50.0%
!! CTGAGTGCCATCGTTTTGGA+TGG + tig0026602:2294-2313 Msa1429950:CDS 50.0%
!! GACTTGGTGACTTGCACCAA+TGG + tig0026602:2362-2381 Msa1429950:CDS 50.0%
ATTCAGGACTCTGCACGCTT+CGG + tig0026602:2723-2742 Msa1429950:CDS 50.0%
TCTCATGGAGGAATCCTCTC+TGG + tig0026602:3204-3223 Msa1429950:CDS 50.0%
GCTTCAGGAAGTTTGTCTGG+AGG + tig0026602:3328-3347 Msa1429950:CDS 50.0%
GGAGGTTCTTCAGTTTCAGC+AGG + tig0026602:3346-3365 Msa1429950:CDS 50.0%
GGTTCTTCAGTTTCAGCAGG+AGG + tig0026602:3349-3368 Msa1429950:CDS 50.0%
ATACCATTAGCATGGGACGC+AGG - tig0026602:3535-3554 None:intergenic 50.0%
! TGTGACGGCTTTGATGGAAG+TGG - tig0026602:3643-3662 None:intergenic 50.0%
! AGCTCTTGTGACGGCTTTGA+TGG - tig0026602:3649-3668 None:intergenic 50.0%
AGTTACACATCGGTCGCCAA+GGG - tig0026602:3764-3783 None:intergenic 50.0%
GCAGGCTTCCAGTTACACAT+CGG - tig0026602:3774-3793 None:intergenic 50.0%
CCATGAGATTGGCACTTTGC+AGG - tig0026602:3792-3811 None:intergenic 50.0%
! CCTGCAAAGTGCCAATCTCA+TGG + tig0026602:3789-3808 Msa1429950:CDS 50.0%
! TCACAGTCTTGTGAGTAGCC+AGG - tig0026602:3981-4000 None:intergenic 50.0%
!! GGAACGACTTTTGGAGAGCT+TGG + tig0026602:4131-4150 Msa1429950:CDS 50.0%
TTCTCTGTACAGAGCCGCTT+TGG - tig0026602:4578-4597 None:intergenic 50.0%
! ATGCTGATTGCAACGGAGGT+GGG - tig0026602:4688-4707 None:intergenic 50.0%
! AATGCTGATTGCAACGGAGG+TGG - tig0026602:4689-4708 None:intergenic 50.0%
! CTGGCGAATGCTGATTGCAA+CGG - tig0026602:4695-4714 None:intergenic 50.0%
!! TTCGGCTTTGTTGGACTGCA+AGG - tig0026602:4831-4850 None:intergenic 50.0%
AGTCCAACAAAGCCGAATCC+AGG + tig0026602:4834-4853 Msa1429950:intron 50.0%
TCCCTCTGTAAAGCCACTTC+TGG + tig0026602:5753-5772 Msa1429950:CDS 50.0%
TTCTCACAGTTGCTCCACCA+GGG - tig0026602:5789-5808 None:intergenic 50.0%
! TGCTGTTAGCTTCGGGTACT+TGG - tig0026602:5816-5835 None:intergenic 50.0%
GATGCAGAGGACTACATAGC+AGG - tig0026602:5885-5904 None:intergenic 50.0%
CAAATGTGTCACGGATGCAG+AGG - tig0026602:5898-5917 None:intergenic 50.0%
CTCTGCATCCGTGACACATT+TGG + tig0026602:5896-5915 Msa1429950:intron 50.0%
! GGCGATATTCTAGGAGATCC+AGG - tig0026602:5953-5972 None:intergenic 50.0%
ATGTCAGGAAGGCTTGGGAA+AGG - tig0026602:5974-5993 None:intergenic 50.0%
CTCTCCATTACGGTCATCCA+AGG + tig0026602:6033-6052 Msa1429950:CDS 50.0%
!! GATAGGGAAAGGAGGGTACT+TGG + tig0026602:6106-6125 Msa1429950:intron 50.0%
!! GGAAAGGAGGGTACTTGGTT+TGG + tig0026602:6111-6130 Msa1429950:intron 50.0%
TGAGGGGTCCTCTTACTTTC+CGG - tig0026602:6746-6765 None:intergenic 50.0%
! TGATGACGTTGATGTGGGCT+TGG + tig0026602:6770-6789 Msa1429950:CDS 50.0%
! GGGCTTGGTTAGTGACTCTA+TGG + tig0026602:6785-6804 Msa1429950:CDS 50.0%
TGGAAGTTCCGCGTCATCAT+CGG + tig0026602:6833-6852 Msa1429950:CDS 50.0%
GACAAGGGGCTATGTAAGAG+CGG + tig0026602:6963-6982 Msa1429950:three_prime_UTR 50.0%
CAGAAGAAGCAGAGCGGTAC+TGG + tig0026602:1626-1645 Msa1429950:CDS 55.0%
GACTCGCAACAAGGGTGAAC+TGG + tig0026602:3267-3286 Msa1429950:CDS 55.0%
! GATGACAGCCTGCTAGCTTC+AGG + tig0026602:3313-3332 Msa1429950:CDS 55.0%
TCTCCTGCGTCCCATGCTAA+TGG + tig0026602:3529-3548 Msa1429950:CDS 55.0%
CATTGCTGTGCTTACAGGGG+TGG - tig0026602:3587-3606 None:intergenic 55.0%
GTTACACATCGGTCGCCAAG+GGG - tig0026602:3763-3782 None:intergenic 55.0%
CAGTTACACATCGGTCGCCA+AGG - tig0026602:3765-3784 None:intergenic 55.0%
CTTGGCGACCGATGTGTAAC+TGG + tig0026602:3763-3782 Msa1429950:CDS 55.0%
CCAGTCCTCTCAAGTACAGC+AGG - tig0026602:4015-4034 None:intergenic 55.0%
CCTGCTGTACTTGAGAGGAC+TGG + tig0026602:4012-4031 Msa1429950:CDS 55.0%
! TTAGGCAAGGAAGGCACAGG+AGG - tig0026602:4306-4325 None:intergenic 55.0%
CAAAGTCTCGGGCTTAGGCA+AGG - tig0026602:4319-4338 None:intergenic 55.0%
! GCGAATGCTGATTGCAACGG+AGG - tig0026602:4692-4711 None:intergenic 55.0%
CGTTGCAATCAGCATTCGCC+AGG + tig0026602:4693-4712 Msa1429950:CDS 55.0%
! CCTCCTGGATTCGGCTTTGT+TGG - tig0026602:4840-4859 None:intergenic 55.0%
CCAACAAAGCCGAATCCAGG+AGG + tig0026602:4837-4856 Msa1429950:CDS 55.0%
ACAAAGCCGAATCCAGGAGG+TGG + tig0026602:4840-4859 Msa1429950:CDS 55.0%
TCTCCTCCACCTCCTGGATT+CGG - tig0026602:4849-4868 None:intergenic 55.0%
CATGTTTCTCCTCCACCTCC+TGG - tig0026602:4855-4874 None:intergenic 55.0%
GCAACCACAATGCAAGCCAC+AGG + tig0026602:5618-5637 Msa1429950:CDS 55.0%
GGGGGAGCTAGACATAGAAC+AGG + tig0026602:5685-5704 Msa1429950:CDS 55.0%
GGGCCAAGTTCAACCAGAAG+TGG - tig0026602:5769-5788 None:intergenic 55.0%
! CTTCTGGTTGAACTTGGCCC+TGG + tig0026602:5769-5788 Msa1429950:CDS 55.0%
CTTCTCACAGTTGCTCCACC+AGG - tig0026602:5790-5809 None:intergenic 55.0%
GGGACATGTCAGGAAGGCTT+GGG - tig0026602:5979-5998 None:intergenic 55.0%
GGAAGTTCCGCGTCATCATC+GGG + tig0026602:6834-6853 Msa1429950:CDS 55.0%
AAGGGGCTATGTAAGAGCGG+TGG + tig0026602:6966-6985 Msa1429950:three_prime_UTR 55.0%
AGGGGCTATGTAAGAGCGGT+GGG + tig0026602:6967-6986 Msa1429950:three_prime_UTR 55.0%
! GGCTTAGGCAAGGAAGGCAC+AGG - tig0026602:4309-4328 None:intergenic 60.0%
GTCTCGGGCTTAGGCAAGGA+AGG - tig0026602:4315-4334 None:intergenic 60.0%
CCAGGCAAAGTCTCGGGCTT+AGG - tig0026602:4324-4343 None:intergenic 60.0%
CCTAAGCCCGAGACTTTGCC+TGG + tig0026602:4321-4340 Msa1429950:CDS 60.0%
AAGCCGAATCCAGGAGGTGG+AGG + tig0026602:4843-4862 Msa1429950:CDS 60.0%
CTGGTTGAACTTGGCCCTGG+TGG + tig0026602:5772-5791 Msa1429950:CDS 60.0%
GGGGACATGTCAGGAAGGCT+TGG - tig0026602:5980-5999 None:intergenic 60.0%
!! GGAGAGCGCTGGGGTGAAAG+CGG - tig0026602:3514-3533 None:intergenic 65.0%
!! ATGGGACGCAGGAGAGCGCT+GGG - tig0026602:3524-3543 None:intergenic 65.0%
CGGTCGCCAAGGGGACTACT+AGG - tig0026602:3754-3773 None:intergenic 65.0%
! CGGTGCACCCGATGATGACG+CGG - tig0026602:6844-6863 None:intergenic 65.0%
!! TGGGACGCAGGAGAGCGCTG+GGG - tig0026602:3523-3542 None:intergenic 70.0%
! CATGGGACGCAGGAGAGCGC+TGG - tig0026602:3525-3544 None:intergenic 70.0%
TGGTCGCCGGCACGCCGTAA+TGG + tig0026602:5664-5683 Msa1429950:CDS 70.0%
GGTCGCCGGCACGCCGTAAT+GGG + tig0026602:5665-5684 Msa1429950:CDS 70.0%
GTCGCCGGCACGCCGTAATG+GGG + tig0026602:5666-5685 Msa1429950:CDS 70.0%
TCGCCGGCACGCCGTAATGG+GGG + tig0026602:5667-5686 Msa1429950:CDS 70.0%
GCTCCCCCATTACGGCGTGC+CGG - tig0026602:5673-5692 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0026602 gene 1406 7227 1406 ID=Msa1429950;Name=Msa1429950
tig0026602 mRNA 1406 7227 1406 ID=Msa1429950-mRNA-1;Parent=Msa1429950;Name=Msa1429950-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|1|1|1|1|1|16|337|1003
tig0026602 exon 1406 1540 1406 ID=Msa1429950-mRNA-1:exon:6758;Parent=Msa1429950-mRNA-1
tig0026602 exon 1625 1767 1625 ID=Msa1429950-mRNA-1:exon:6759;Parent=Msa1429950-mRNA-1
tig0026602 exon 1849 1945 1849 ID=Msa1429950-mRNA-1:exon:6760;Parent=Msa1429950-mRNA-1
tig0026602 exon 2068 2114 2068 ID=Msa1429950-mRNA-1:exon:6761;Parent=Msa1429950-mRNA-1
tig0026602 exon 2211 2400 2211 ID=Msa1429950-mRNA-1:exon:6762;Parent=Msa1429950-mRNA-1
tig0026602 exon 2678 2744 2678 ID=Msa1429950-mRNA-1:exon:6763;Parent=Msa1429950-mRNA-1
tig0026602 exon 2913 3092 2913 ID=Msa1429950-mRNA-1:exon:6764;Parent=Msa1429950-mRNA-1
tig0026602 exon 3182 3378 3182 ID=Msa1429950-mRNA-1:exon:6765;Parent=Msa1429950-mRNA-1
tig0026602 exon 3466 4342 3466 ID=Msa1429950-mRNA-1:exon:6766;Parent=Msa1429950-mRNA-1
tig0026602 exon 4552 4714 4552 ID=Msa1429950-mRNA-1:exon:6767;Parent=Msa1429950-mRNA-1
tig0026602 exon 4836 4908 4836 ID=Msa1429950-mRNA-1:exon:6768;Parent=Msa1429950-mRNA-1
tig0026602 exon 5317 5493 5317 ID=Msa1429950-mRNA-1:exon:6769;Parent=Msa1429950-mRNA-1
tig0026602 exon 5568 5844 5568 ID=Msa1429950-mRNA-1:exon:6770;Parent=Msa1429950-mRNA-1
tig0026602 exon 5933 6054 5933 ID=Msa1429950-mRNA-1:exon:6771;Parent=Msa1429950-mRNA-1
tig0026602 exon 6539 6654 6539 ID=Msa1429950-mRNA-1:exon:6772;Parent=Msa1429950-mRNA-1
tig0026602 exon 6740 7227 6740 ID=Msa1429950-mRNA-1:exon:6773;Parent=Msa1429950-mRNA-1
tig0026602 CDS 1406 1540 1406 ID=Msa1429950-mRNA-1:cds;Parent=Msa1429950-mRNA-1
tig0026602 CDS 1625 1767 1625 ID=Msa1429950-mRNA-1:cds;Parent=Msa1429950-mRNA-1
tig0026602 CDS 1849 1945 1849 ID=Msa1429950-mRNA-1:cds;Parent=Msa1429950-mRNA-1
tig0026602 CDS 2068 2114 2068 ID=Msa1429950-mRNA-1:cds;Parent=Msa1429950-mRNA-1
tig0026602 CDS 2211 2400 2211 ID=Msa1429950-mRNA-1:cds;Parent=Msa1429950-mRNA-1
tig0026602 CDS 2678 2744 2678 ID=Msa1429950-mRNA-1:cds;Parent=Msa1429950-mRNA-1
tig0026602 CDS 2913 3092 2913 ID=Msa1429950-mRNA-1:cds;Parent=Msa1429950-mRNA-1
tig0026602 CDS 3182 3378 3182 ID=Msa1429950-mRNA-1:cds;Parent=Msa1429950-mRNA-1
tig0026602 CDS 3466 4342 3466 ID=Msa1429950-mRNA-1:cds;Parent=Msa1429950-mRNA-1
tig0026602 CDS 4552 4714 4552 ID=Msa1429950-mRNA-1:cds;Parent=Msa1429950-mRNA-1
tig0026602 CDS 4836 4908 4836 ID=Msa1429950-mRNA-1:cds;Parent=Msa1429950-mRNA-1
tig0026602 CDS 5317 5493 5317 ID=Msa1429950-mRNA-1:cds;Parent=Msa1429950-mRNA-1
tig0026602 CDS 5568 5844 5568 ID=Msa1429950-mRNA-1:cds;Parent=Msa1429950-mRNA-1
tig0026602 CDS 5933 6054 5933 ID=Msa1429950-mRNA-1:cds;Parent=Msa1429950-mRNA-1
tig0026602 CDS 6539 6654 6539 ID=Msa1429950-mRNA-1:cds;Parent=Msa1429950-mRNA-1
tig0026602 CDS 6740 6890 6740 ID=Msa1429950-mRNA-1:cds;Parent=Msa1429950-mRNA-1
tig0026602 three_prime_UTR 6891 7227 6891 ID=Msa1429950-mRNA-1:three_prime_utr;Parent=Msa1429950-mRNA-1
Gene Sequence

>Msa1429950

TGTATTCTAACTTTCTCTCTTTTGTTGCAGAATGAGCTAGCATTGGATGAGAAAAGCTGTAAAGAAGCAATGGATCTGTTTGGAGAAACCAAACATCTTCTCATGGCAAATGTTTCATCAATGGGAAATGGAACGACAGAAGAAGCAGAGCGGTACTGGTTTGCTTTTATTTTATACTCTATCAAGAGGCTGACTCAGAAAAATGAGGAGAGTGAAAAAGAAGAGATTGAGAATACTGGTCTTACCTTGTGTCGAATATTGAGAGCAGCGAAGCTTAACATTGCAGATTTTTTTAAAGAACTTCCTCAGTTTGTTGTCAAAGCTGGTCCAATTTTAAGCAATCGATTCGGCTCTGATTGGGAAAACAAGCTTGAGGCGAAAGAGATGCATGCTAACACTATTCACTTGAAGATTCTTAGCAAGTATTATAAGCGTGTATTTGAAGAGTTCTTCGTGTCAACTGATGCAAATATTGAAAATAAGTTGTCTGTTACCAACCGTGTATCTGAGTGCCATCGTTTTGGATGGTTACTTTTCTTGGCGCTCCGTGTACATGCTTTCAGCCGTTTTAAAGACTTGGTGACTTGCACCAATGGTTTAATTTCTATCATGGCTATTCTAATTATTCATGTTCCGGCTCGTTTTCGGAATTTCAACATTCAGGACTCTGCACGCTTCGTTAAGAAAAGCAGCAAAGGTGTGGACCTCCTTGCTTCACTTTGCAACATATATAACACTTCAGAAGATGAGTTGAGGAAAACCATGGAGCAAGCCAATAATTTAGTAGCAGATATATTGAAGAAGACGCCCTGTTTGGCATCTGAATGCGAAACTGAAAACCTAGAGGATTTTGATAAAGATGGTTTGACCTATTTTAAAGATCTCATGGAGGAATCCTCTCTGGCGTCTAGTTTGAATATCTTAGAAAATGATTATGATCAAATGACTCGCAACAAGGGTGAACTGGATGAAAGGTTATTCATTAATGAGGATGACAGCCTGCTAGCTTCAGGAAGTTTGTCTGGAGGTTCTTCAGTTTCAGCAGGAGGTGTAAAGAGGAAATATGATTTGATGATGTCACCCTCCAAGACCATTATAAGTCCGCTTTCACCCCAGCGCTCTCCTGCGTCCCATGCTAATGGTATTCCAGGTAGCACAAATTCAAAGATTGCTGCCACCCCTGTAAGCACAGCAATGACTACTGCAAAGTGGCTTCGAACTGTTATTTCTCCACTTCCATCAAAGCCGTCACAAGAGCTAGAGCGATTCTTGACTTCATGTGACAGAGATATTACTAGTGAGGTAGTACGCAGAGCACAGATTATATTGCAAGCTATATTTCCTAGTAGTCCCCTTGGCGACCGATGTGTAACTGGAAGCCTGCAAAGTGCCAATCTCATGGACAATATATGGGCCGAACAACGAAGATTAGAAGCCATGAAGTTATACTATAGGTTGTTGGCAACAATGTGCCGAGCAGAAGCTCAAATACTTGGCAACAATTTAACTTCACTGCTCACTAATGAGAGGTTCCATAGGTGTATGCTTGCATGTTCTGCAGAATTAGTCCTGGCTACTCACAAGACTGTGACAATGTTGTTTCCTGCTGTACTTGAGAGGACTGGAATAACAGCTTTTGATCTTAGCAAGGTGATAGAAAGTTTCATTAGATATGAAGAATCTCTCCCAAGAGAATTGAGGCGACATCTTAATTCATTGGAGGAACGACTTTTGGAGAGCTTGGTATGGGAAAAAGGTTCTTCGATGTATAATTCATTAGCAGTAGCTAGACCTGCCCTTTCTGCAGAAATCAATCGGCTTAGTATGTTAGCCGAACCAATGCCATCATTAGATGAAATTGCAATGCATATTAACTTCTCTTGTGGAGGACTGCCTCCTGTGCCTTCCTTGCCTAAGCCCGAGACTTTGCCTGCTCAAAATGGGGATATGAGATCACCAAAGCGGCTCTGTACAGAGAATCGAAATGTTTTAGCGGAACGAAATTCTTTTACTTCACCGGTGAAAGATAGGCTTCTTCACTTAAGTAACCTTAAATCAAAACTACTCCCACCTCCGTTGCAATCAGCATTCGCCAGTCCAACAAAGCCGAATCCAGGAGGTGGAGGAGAAACATGTGCAGAAACTGGGATCAGCGTCTTTTTTAGCAAGATTGTTAAGTTGGGAGCAGTCAGAATAAGTGGAATGGTTGAAAGGCTACAATTATCTCAGCAGACAAGGGAGAATGTATACTCTCTTTTCCAGCGAATCCTAAATCAACGGACATCTCTCTTCTTCAACCGCCATATTGACCAAATCATTTTGTGTTGCTTCTATGGAGTAGCAAAGATTTCACAACTGAACCTAACTTTTAGGGAGATTATATACAACTACAGAAAGCAACCACAATGCAAGCCACAGGTTTTCCGTAGTGTATTTGTTGACTGGTCGCCGGCACGCCGTAATGGGGGAGCTAGACATAGAACAGGACAGGAGCACATCGATATCATTTCATTTTACAACGAAGTTTTCATTCCCTCTGTAAAGCCACTTCTGGTTGAACTTGGCCCTGGTGGAGCAACTGTGAGAAGTGACCAAGTACCCGAAGCTAACAGCAAAACTGACGGCCATTTAGTTCAAAATCCTGGATCTCCTAGAATATCGCCTTTCCCAAGCCTTCCTGACATGTCCCCTAAAAAAGTGTCTGCCGCACACAATGTGTATGTCTCTCCATTACGGTCATCCAAGATGGATGCTTTAATTTCACATAGCTCCAAAAGCTATTATGCATGTGTTGGGGAGAGCACTCATGCCTATCAGAGCCCTTCAAAAGACCTGACTGCCATAAACAATCGGTTAAACAGCAACCGGAAAGTAAGAGGACCCCTCAAGTTTGATGACGTTGATGTGGGCTTGGTTAGTGACTCTATGGTTGCAAACAGCCTCTATCTGCAGAATGGAAGTTCCGCGTCATCATCGGGTGCACCGTTGAAGTCTGAGCAACCTGACTCTTAA
Protein sequence

>Msa1429950

CILTFSLLLQNELALDEKSCKEAMDLFGETKHLLMANVSSMGNGTTEEAERYWFAFILYSIKRLTQKNEESEKEEIENTGLTLCRILRAAKLNIADFFKELPQFVVKAGPILSNRFGSDWENKLEAKEMHANTIHLKILSKYYKRVFEEFFVSTDANIENKLSVTNRVSECHRFGWLLFLALRVHAFSRFKDLVTCTNGLISIMAILIIHVPARFRNFNIQDSARFVKKSSKGVDLLASLCNIYNTSEDELRKTMEQANNLVADILKKTPCLASECETENLEDFDKDGLTYFKDLMEESSLASSLNILENDYDQMTRNKGELDERLFINEDDSLLASGSLSGGSSVSAGGVKRKYDLMMSPSKTIISPLSPQRSPASHANGIPGSTNSKIAATPVSTAMTTAKWLRTVISPLPSKPSQELERFLTSCDRDITSEVVRRAQIILQAIFPSSPLGDRCVTGSLQSANLMDNIWAEQRRLEAMKLYYRLLATMCRAEAQILGNNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRYEESLPRELRRHLNSLEERLLESLVWEKGSSMYNSLAVARPALSAEINRLSMLAEPMPSLDEIAMHINFSCGGLPPVPSLPKPETLPAQNGDMRSPKRLCTENRNVLAERNSFTSPVKDRLLHLSNLKSKLLPPPLQSAFASPTKPNPGGGGETCAETGISVFFSKIVKLGAVRISGMVERLQLSQQTRENVYSLFQRILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWSPARRNGGARHRTGQEHIDIISFYNEVFIPSVKPLLVELGPGGATVRSDQVPEANSKTDGHLVQNPGSPRISPFPSLPDMSPKKVSAAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNSNRKVRGPLKFDDVDVGLVSDSMVANSLYLQNGSSASSSGAPLKSEQPDS*