AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1433070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1433070 MtrunA17_Chr2g0320631 91.906 556 26 3 1 554 1 539 0.0 1035
Msa1433070 MtrunA17_Chr4g0027671 71.739 552 132 6 9 553 8 542 0.0 783
Msa1433070 MtrunA17_Chr1g0179611 64.051 548 161 9 7 544 11 532 0.0 708
Msa1433070 MtrunA17_Chr5g0407121 44.038 520 196 6 19 537 17 442 4.37e-148 433
Msa1433070 MtrunA17_Chr8g0370321 43.570 521 193 8 19 537 17 438 2.24e-145 426
Msa1433070 MtrunA17_Chr4g0058241 37.342 158 92 4 25 182 84 234 2.87e-26 111
Msa1433070 MtrunA17_Chr3g0116701 36.943 157 92 4 25 181 80 229 5.61e-25 107
Msa1433070 MtrunA17_Chr3g0116701 27.700 213 129 8 284 492 228 419 1.19e-13 73.2
Msa1433070 MtrunA17_Chr3g0139371 35.393 178 102 5 4 181 45 209 2.30e-24 105
Msa1433070 MtrunA17_Chr3g0139371 28.947 190 91 5 318 492 238 398 2.21e-15 78.2
Msa1433070 MtrunA17_Chr3g0123491 32.911 158 99 4 25 182 79 229 2.17e-22 100
Msa1433070 MtrunA17_Chr3g0123491 35.366 82 52 1 318 398 260 341 4.86e-11 65.1
Msa1433070 MtrunA17_Chr8g0369241 38.298 141 81 3 40 179 139 274 4.24e-21 97.8
Msa1433070 MtrunA17_Chr8g0369241 27.966 236 139 8 309 515 273 506 6.33e-14 75.1
Msa1433070 MtrunA17_Chr1g0210061 32.919 161 95 6 25 179 596 749 2.82e-15 79.3
Msa1433070 MtrunA17_Chr1g0210061 28.351 194 117 4 309 494 748 927 5.73e-12 68.9
Msa1433070 MtrunA17_Chr6g0480541 34.459 148 88 3 38 181 896 1038 6.98e-15 78.2
Msa1433070 MtrunA17_Chr5g0437131 37.162 148 84 3 38 181 401 543 7.79e-15 77.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1433070 AT3G53030.1 64.030 531 161 5 7 537 9 509 0.0 682
Msa1433070 AT5G22840.1 64.325 541 158 6 7 542 12 522 0.0 674
Msa1433070 AT3G44850.1 64.919 553 159 8 1 540 1 531 0.0 672
Msa1433070 AT4G35500.1 44.219 493 193 7 21 507 19 435 5.97e-144 422
Msa1433070 AT4G35500.2 42.308 494 202 8 21 507 19 436 1.37e-134 399
Msa1433070 AT2G17530.2 63.483 178 65 0 21 198 19 196 2.31e-78 251
Msa1433070 AT2G17530.2 42.657 143 74 2 253 387 183 325 1.57e-28 117
Msa1433070 AT2G17530.1 59.896 192 74 1 21 212 19 207 5.17e-77 250
Msa1433070 AT2G17530.1 36.824 296 139 5 253 540 183 438 1.35e-56 196
Msa1433070 AT2G17530.3 59.896 192 74 1 21 212 19 207 5.17e-77 250
Msa1433070 AT2G17530.3 36.824 296 139 5 253 540 183 438 1.35e-56 196
Msa1433070 AT4G24740.4 37.209 172 100 5 25 196 84 247 4.15e-26 109
Msa1433070 AT4G24740.3 37.209 172 100 5 25 196 84 247 7.11e-26 109
Msa1433070 AT4G24740.3 40.000 85 50 1 318 401 263 347 1.23e-11 66.6
Msa1433070 AT4G24740.7 34.171 199 116 6 25 216 46 236 1.08e-25 109
Msa1433070 AT4G24740.7 31.111 180 102 7 318 493 225 386 7.38e-14 73.9
Msa1433070 AT4G24740.1 34.171 199 116 6 25 216 84 274 1.53e-25 109
Msa1433070 AT4G24740.1 31.111 180 102 7 318 493 263 424 7.02e-14 74.3
Msa1433070 AT4G32660.2 37.107 159 93 3 23 181 55 206 2.41e-24 105
Msa1433070 AT4G32660.2 47.541 61 32 0 318 378 235 295 1.21e-11 67.0
Msa1433070 AT4G32660.3 37.107 159 93 3 23 181 47 198 2.66e-24 105
Msa1433070 AT4G32660.3 30.337 178 109 6 318 494 227 390 6.70e-13 70.9
Msa1433070 AT4G32660.1 37.107 159 93 3 23 181 55 206 3.28e-24 105
Msa1433070 AT4G32660.1 30.337 178 109 6 318 494 235 398 7.57e-13 70.9
Msa1433070 AT3G53570.1 36.943 157 92 4 25 181 101 250 1.54e-23 104
Msa1433070 AT3G53570.1 27.753 227 133 9 284 503 249 451 3.83e-12 68.9
Msa1433070 AT3G53570.4 36.943 157 92 4 25 181 101 250 1.54e-23 104
Msa1433070 AT3G53570.4 27.753 227 133 9 284 503 249 451 3.83e-12 68.9
Msa1433070 AT3G53570.2 36.943 157 92 4 25 181 101 250 1.54e-23 104
Msa1433070 AT3G53570.2 27.753 227 133 9 284 503 249 451 3.83e-12 68.9
Msa1433070 AT4G24740.5 38.411 151 86 4 46 196 1 144 2.09e-23 99.8
Msa1433070 AT4G24740.5 40.244 82 48 1 318 398 160 241 4.65e-12 66.6
Msa1433070 AT3G53570.3 36.943 157 92 4 25 181 87 236 2.19e-23 103
Msa1433070 AT3G53570.3 27.650 217 129 8 284 493 235 430 4.16e-12 68.9
Msa1433070 AT3G53570.5 36.943 157 92 4 25 181 87 236 2.19e-23 103
Msa1433070 AT3G53570.5 27.650 217 129 8 284 493 235 430 4.16e-12 68.9
Msa1433070 AT4G24740.6 38.411 151 86 4 46 196 1 144 5.77e-23 100
Msa1433070 AT4G24740.6 31.111 180 102 7 318 493 160 321 2.69e-14 74.7
Msa1433070 AT4G24740.9 38.411 151 86 4 46 196 1 144 5.77e-23 100
Msa1433070 AT4G24740.9 31.111 180 102 7 318 493 160 321 2.69e-14 74.7
Msa1433070 AT4G24740.2 38.411 151 86 4 46 196 1 144 5.77e-23 100
Msa1433070 AT4G24740.2 31.111 180 102 7 318 493 160 321 2.69e-14 74.7
Msa1433070 AT5G35980.1 37.584 149 87 3 40 187 122 265 2.81e-22 102
Msa1433070 AT5G35980.1 29.911 224 119 10 307 498 253 470 2.60e-15 80.1
Msa1433070 AT5G35980.3 37.584 149 87 3 40 187 87 230 3.42e-22 101
Msa1433070 AT5G35980.3 29.911 224 119 10 307 498 218 435 3.53e-15 79.3
Msa1433070 AT5G35980.2 37.584 149 87 3 40 187 122 265 5.28e-22 100
Msa1433070 AT5G35980.2 29.911 224 119 10 307 498 253 470 1.72e-15 80.5
Msa1433070 AT1G73450.1 29.775 178 106 4 316 493 986 1144 2.05e-17 86.7
Msa1433070 AT1G73450.1 33.784 148 89 3 38 181 839 981 3.99e-14 76.3
Msa1433070 AT1G73460.2 29.775 178 106 4 316 493 1003 1161 2.06e-17 86.7
Msa1433070 AT1G73460.2 33.784 148 89 3 38 181 856 998 3.12e-14 76.6
Msa1433070 AT1G73460.1 29.775 178 106 4 316 493 1003 1161 2.06e-17 86.7
Msa1433070 AT1G73460.1 33.784 148 89 3 38 181 856 998 3.12e-14 76.6
Msa1433070 AT1G13350.1 33.750 160 95 5 25 179 428 581 5.71e-16 81.6
Msa1433070 AT3G25840.1 32.500 160 97 5 25 179 603 756 6.92e-16 81.6
Msa1433070 AT1G13350.2 33.750 160 95 5 25 179 455 608 7.79e-16 81.3
Msa1433070 AT3G17750.1 28.652 178 108 4 316 493 972 1130 1.34e-15 80.9
Msa1433070 AT3G17750.1 33.784 148 89 3 38 181 825 967 7.09e-14 75.5
Msa1433070 AT1G13350.3 33.750 160 95 5 25 179 501 654 1.49e-15 80.5
Msa1433070 AT4G24740.10 27.957 186 100 3 318 493 57 218 2.19e-15 75.9
Msa1433070 AT4G24740.8 27.957 186 100 3 318 493 57 218 2.19e-15 75.9
Msa1433070 AT3G25840.2 32.500 160 97 5 25 179 341 494 2.54e-15 79.7
Msa1433070 AT4G32660.4 38.000 100 56 2 82 181 1 94 1.13e-13 72.4
Msa1433070 AT4G32660.4 30.168 179 110 6 318 495 123 287 3.99e-13 70.5
Msa1433070 AT3G53640.1 31.875 160 98 5 25 179 309 462 3.06e-13 73.2
Msa1433070 AT2G40120.1 33.548 155 94 3 31 181 252 401 3.90e-13 72.4

Find 169 sgRNAs with CRISPR-Local

Find 395 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGAAATTGTCTTGTGTTAA+TGG 0.126593 tig0027224:-35066 Msa1433070:intron
ATTCAGTGAATGGGAAAATT+AGG 0.138672 tig0027224:+37986 None:intergenic
GCTCTTGGCGGCCGCTATTC+CGG 0.217821 tig0027224:-33413 Msa1433070:CDS
TCTTTACTTGTGGGACTATT+AGG 0.223443 tig0027224:+36146 None:intergenic
AAGTGCAAGCTTGTGGATTT+TGG 0.224760 tig0027224:-36017 Msa1433070:CDS
CATTGATGATGGAGCTTCTT+GGG 0.233630 tig0027224:-33724 Msa1433070:CDS
TGGAAATCTTTGAGTGTCTT+TGG 0.244986 tig0027224:+33051 None:intergenic
TTGGACCACTTTAAGCATTC+AGG 0.246674 tig0027224:-36647 Msa1433070:CDS
AGAAATTTGCTACCATGTTT+TGG 0.273662 tig0027224:-36519 Msa1433070:CDS
CTCTTGGCGGCCGCTATTCC+GGG 0.275238 tig0027224:-33412 Msa1433070:CDS
GCATTGATGATGGAGCTTCT+TGG 0.277074 tig0027224:-33725 Msa1433070:CDS
ACATTCGCCGGTTGCGGTTC+TGG 0.294454 tig0027224:-33359 Msa1433070:CDS
GGAGGCTGTGGAAGTTAGTA+TGG 0.298166 tig0027224:-33097 Msa1433070:CDS
TTTCAACTGTTTGGCTCGCT+TGG 0.308825 tig0027224:-37669 Msa1433070:CDS
GGATCTTTAGATGGATCTAT+TGG 0.324147 tig0027224:+36419 None:intergenic
AGCAATGACTTCTGAAACTA+AGG 0.331800 tig0027224:-36117 Msa1433070:CDS
CACAAGGAAGTCAGGTTTCT+AGG 0.332484 tig0027224:-36088 Msa1433070:CDS
GGGTCATACTTAAGAGGTTA+TGG 0.335126 tig0027224:-32896 Msa1433070:three_prime_UTR
TTCAGTGAATGGGAAAATTA+GGG 0.339771 tig0027224:+37987 None:intergenic
TGGCATAACTCCATTGTAAT+AGG 0.342783 tig0027224:+32827 None:intergenic
CGCTTGGGATACTCTCAAAT+TGG 0.345638 tig0027224:-37653 Msa1433070:intron
TTGTTCAGAGTAAGCTTGGC+TGG 0.354810 tig0027224:-37699 Msa1433070:CDS
AAACTCCTAAAATAACATTA+TGG 0.356428 tig0027224:+32658 None:intergenic
GTGAAACCAATTGTAGAAAA+TGG 0.359586 tig0027224:-36179 Msa1433070:CDS
TCTAAAGATCCTAGAAAATC+AGG 0.368774 tig0027224:-36407 Msa1433070:CDS
GCTGATTCATCTTTACTTGT+GGG 0.369166 tig0027224:+36137 None:intergenic
GCGGTTCTGGCCTATTACTA+AGG 0.369946 tig0027224:-33346 Msa1433070:CDS
TGAATCTATTTGAAGAATAA+TGG 0.374054 tig0027224:+37910 None:intergenic
TTACTACAATCATCTTGTTC+AGG 0.376415 tig0027224:+36206 None:intergenic
GGATGATGAGCATCTAATCT+AGG 0.385887 tig0027224:+32679 None:intergenic
ATCCATGCTGATGCTATTAA+CGG 0.392213 tig0027224:-33156 Msa1433070:CDS
TGGTTTGAGAAACCCTTCAT+AGG 0.394006 tig0027224:-32876 Msa1433070:three_prime_UTR
AGATGTCCTGAGGTTCTTCT+AGG 0.395840 tig0027224:-35939 Msa1433070:CDS
GAAATGTGTTGTGAAGCTTT+TGG 0.397383 tig0027224:-36666 Msa1433070:CDS
TAATGGTCAGCATGTTTGTA+TGG 0.402029 tig0027224:-36621 Msa1433070:CDS
ATTTACTCTTCAGGATCATC+TGG 0.402061 tig0027224:-33747 Msa1433070:intron
TTTAAGCATTCAGGGCCTAA+TGG 0.407435 tig0027224:-36638 Msa1433070:CDS
TTCAACTGTTTGGCTCGCTT+GGG 0.408495 tig0027224:-37668 Msa1433070:CDS
AACACAAGACAATTTCTGAT+TGG 0.409673 tig0027224:+35071 None:intergenic
TTATAAGCATTATGTGCAAA+TGG 0.411340 tig0027224:-32917 Msa1433070:three_prime_UTR
AGAATCCTCCTCTGCTGCCT+CGG 0.415247 tig0027224:+36235 None:intergenic
GAGAAAAGCCTGGAAAGTTA+AGG 0.417273 tig0027224:-33134 Msa1433070:CDS
GGATACAGTCTTGACTTTAG+TGG 0.417337 tig0027224:+36364 None:intergenic
TGAGACACATTCGCCGGTTG+CGG 0.421836 tig0027224:-33365 Msa1433070:CDS
TGCTGATTCATCTTTACTTG+TGG 0.423615 tig0027224:+36136 None:intergenic
TGGACCACTTTAAGCATTCA+GGG 0.426302 tig0027224:-36646 Msa1433070:CDS
TCTCTTGCCCTACCCTATGA+AGG 0.427728 tig0027224:+32863 None:intergenic
ATTAAGCTTCAAACTAGTAT+TGG 0.429527 tig0027224:+37855 None:intergenic
GACATCTATACTGCCTAGTC+TGG 0.431990 tig0027224:+35955 None:intergenic
TCCGTCAAAACCTTAGTAAT+AGG 0.434151 tig0027224:+33336 None:intergenic
ATGGGGAATATGACCATTGA+TGG 0.439672 tig0027224:-33078 Msa1433070:CDS
GCTTAATCCTTCGACTTCAA+TGG 0.441539 tig0027224:-37839 Msa1433070:exon
TTCTTGTAAAAGTGTGTAGA+AGG 0.444333 tig0027224:-32794 Msa1433070:three_prime_UTR
GGATGTTCCACAAGGAAGTC+AGG 0.451642 tig0027224:-36096 Msa1433070:CDS
TAGGGTAGGGCAAGAGAAGC+TGG 0.453382 tig0027224:-32857 Msa1433070:three_prime_UTR
TTTCCCATTCACTGAATTCG+AGG 0.463468 tig0027224:-37980 Msa1433070:five_prime_UTR
GAATCCTCCTCTGCTGCCTC+GGG 0.466324 tig0027224:+36236 None:intergenic
AGAAAAGCCTGGAAAGTTAA+GGG 0.469505 tig0027224:-33133 Msa1433070:CDS
ATTGGGTTGGAGTGAAATTG+AGG 0.476092 tig0027224:+37947 None:intergenic
TGTTCAGAGTAAGCTTGGCT+GGG 0.480298 tig0027224:-37698 Msa1433070:CDS
CTCAGTGTCTTACTCATCCA+TGG 0.484235 tig0027224:-33221 Msa1433070:CDS
TCAAGACTGTATCCAAGAAC+GGG 0.487936 tig0027224:-36355 Msa1433070:CDS
GGATCATCTGGCATTGATGA+TGG 0.488648 tig0027224:-33735 Msa1433070:CDS
ATACAAACATGCTGACCATT+AGG 0.491084 tig0027224:+36623 None:intergenic
GTAGCAAATTTCTTTGACCA+TGG 0.492513 tig0027224:+36529 None:intergenic
ATATGCTTTGAGCTTGCCAC+TGG 0.494568 tig0027224:-35873 Msa1433070:CDS
ATGGTGGTGGATGAGAAGAT+TGG 0.495668 tig0027224:+37929 None:intergenic
CTCTTGCCCTACCCTATGAA+GGG 0.496347 tig0027224:+32864 None:intergenic
TATAAGCATTATGTGCAAAT+GGG 0.501452 tig0027224:-32916 Msa1433070:three_prime_UTR
GGAAAGTCCCGAGGCAGCAG+AGG 0.502003 tig0027224:-36243 Msa1433070:CDS
GCTATTAACGGAGAAAAGCC+TGG 0.503727 tig0027224:-33144 Msa1433070:CDS
TAATAGGCCAGAACCGCAAC+CGG 0.505990 tig0027224:+33352 None:intergenic
AAAACCTCGAATTCAGTGAA+TGG 0.506638 tig0027224:+37976 None:intergenic
AAACCTCGAATTCAGTGAAT+GGG 0.509572 tig0027224:+37977 None:intergenic
TATGTTGTTCAGAGTAAGCT+TGG 0.509816 tig0027224:-37703 Msa1433070:CDS
TTGGGTTGGAGTGAAATTGA+GGG 0.513437 tig0027224:+37948 None:intergenic
GCAAATGGGTCATACTTAAG+AGG 0.513458 tig0027224:-32902 Msa1433070:three_prime_UTR
TTTGTTCAGATTGCTCTTGG+CGG 0.517367 tig0027224:-33425 Msa1433070:intron
AAAGAACGAGCAGGAGGCTG+TGG 0.520764 tig0027224:-33109 Msa1433070:CDS
AATTTCTTTGACCATGGGAA+GGG 0.522927 tig0027224:+36535 None:intergenic
GGTTATCATGCGGTTCAGAT+TGG 0.523054 tig0027224:-37748 Msa1433070:CDS
GAGAAACCCTTCATAGGGTA+GGG 0.526215 tig0027224:-32870 Msa1433070:three_prime_UTR
TTAGTGGTTGGAAGTATAAG+TGG 0.528613 tig0027224:+36380 None:intergenic
ATTTCTTTGACCATGGGAAG+GGG 0.529053 tig0027224:+36536 None:intergenic
GATGATGAGCATCTAATCTA+GGG 0.529346 tig0027224:+32680 None:intergenic
GCACTACACGGAAGCGGCAA+TGG 0.529430 tig0027224:-36738 Msa1433070:CDS
TGGTGGTGGATGAGAAGATT+GGG 0.530007 tig0027224:+37930 None:intergenic
TCTCAAACAAATTGCTGAAG+GGG 0.530198 tig0027224:-36702 Msa1433070:CDS
AAGTCCCGAGGCAGCAGAGG+AGG 0.531648 tig0027224:-36240 Msa1433070:CDS
CGAGGACCTGCACTCATCCA+TGG 0.534400 tig0027224:+33204 None:intergenic
GTTCAGAGTAAGCTTGGCTG+GGG 0.535588 tig0027224:-37697 Msa1433070:CDS
CAAAGTCAAGTAACGGAACA+AGG 0.536228 tig0027224:+33268 None:intergenic
ATTCTCAAACAAATTGCTGA+AGG 0.536936 tig0027224:-36704 Msa1433070:CDS
CATGGATGAGTGCAGGTCCT+CGG 0.537891 tig0027224:-33203 Msa1433070:CDS
GCCAATGTGCGCTACTCCGA+TGG 0.543277 tig0027224:+33018 None:intergenic
ACAGTGGTGAAAACTATGAC+AGG 0.544366 tig0027224:-35830 Msa1433070:CDS
GGTTTGAGAAACCCTTCATA+GGG 0.544952 tig0027224:-32875 Msa1433070:three_prime_UTR
TTGGAGTGAAATTGAGGGAA+AGG 0.545619 tig0027224:+37953 None:intergenic
TGAGAAACCCTTCATAGGGT+AGG 0.545723 tig0027224:-32871 Msa1433070:three_prime_UTR
ACTCGACTCCGGCAGATATG+TGG 0.548164 tig0027224:-35908 Msa1433070:CDS
TCCTTCGACTTCAATGGCGG+AGG 0.550311 tig0027224:-37833 Msa1433070:exon
TGGATGGAAGCCTATTACAA+TGG 0.552235 tig0027224:-32837 Msa1433070:three_prime_UTR
AAACATGATAAAAGTTCGAA+TGG 0.554779 tig0027224:-36326 Msa1433070:CDS
CTCCGTTAATAGCATCAGCA+TGG 0.557184 tig0027224:+33154 None:intergenic
TGATTGGCAACACTTCCGCT+AGG 0.557838 tig0027224:+35087 None:intergenic
TTAGAACCTAGAAGAACCTC+AGG 0.563105 tig0027224:+35933 None:intergenic
TTCTCAAACAAATTGCTGAA+GGG 0.564427 tig0027224:-36703 Msa1433070:CDS
GGTGGATGAGAAGATTGGGT+TGG 0.565806 tig0027224:+37934 None:intergenic
TGCTCAGCACTACACGGAAG+CGG 0.566332 tig0027224:-36744 Msa1433070:CDS
ACTCATCCATGGATGAGTGC+AGG 0.567258 tig0027224:-33210 Msa1433070:CDS
AAATTTCTTTGACCATGGGA+AGG 0.567519 tig0027224:+36534 None:intergenic
GTCAAGACTGTATCCAAGAA+CGG 0.569523 tig0027224:-36356 Msa1433070:CDS
GTGTAAGAAGATTGTCCCCA+AGG 0.570530 tig0027224:+36588 None:intergenic
GTTAAGGGAAAAGAACGAGC+AGG 0.570911 tig0027224:-33118 Msa1433070:CDS
TAGCAAATTTCTTTGACCAT+GGG 0.571005 tig0027224:+36530 None:intergenic
CCTAATATGCCTACCTTGCG+AGG 0.572307 tig0027224:+33695 None:intergenic
GCAAAGGACCACATATCTGC+CGG 0.573521 tig0027224:+35900 None:intergenic
GAGGCTGTGGAAGTTAGTAT+GGG 0.573693 tig0027224:-33096 Msa1433070:CDS
ATTGATGATGGAGCTTCTTG+GGG 0.574003 tig0027224:-33723 Msa1433070:CDS
TCGTGGTATTCCCCTTCCCA+TGG 0.577077 tig0027224:-36546 Msa1433070:CDS
TTTACAAGAAGTGAAAGAAG+TGG 0.578789 tig0027224:+32807 None:intergenic
ACAGTCTTGACTTTAGTGGT+TGG 0.580495 tig0027224:+36368 None:intergenic
CTCAAAGCATATGCAAGCAA+AGG 0.581090 tig0027224:+35884 None:intergenic
GATTACAGTTCGGAAGATGA+AGG 0.582493 tig0027224:-37793 Msa1433070:CDS
TCAGGAACAAAGTCAAGTAA+CGG 0.586688 tig0027224:+33261 None:intergenic
AGATGCGAGTGATTACAGTT+CGG 0.587171 tig0027224:-37803 Msa1433070:CDS
GCATGGATGCTATTCACTGA+GGG 0.587196 tig0027224:+33171 None:intergenic
GTGATTTGAGACACATTCGC+CGG 0.588620 tig0027224:-33371 Msa1433070:CDS
TGATCTTAAGTGCAAGCTTG+TGG 0.588631 tig0027224:-36024 Msa1433070:CDS
GTAGGGCAAGAGAAGCTGGA+TGG 0.592297 tig0027224:-32853 Msa1433070:three_prime_UTR
TCTTGGGGTGATGCCTCGCA+AGG 0.594012 tig0027224:-33708 Msa1433070:intron
TGAAAACTATGACAGGGATG+AGG 0.596142 tig0027224:-35823 Msa1433070:intron
TTAAGAAACAAAAGATGTAA+CGG 0.596342 tig0027224:+32566 None:intergenic
AATTGCTGAAGGGGATCTAG+AGG 0.602637 tig0027224:-36693 Msa1433070:CDS
TGTCTTTGGAGATCCATCAA+TGG 0.602892 tig0027224:+33065 None:intergenic
GGAAGTCAGGTTTCTAGGAG+AGG 0.605679 tig0027224:-36083 Msa1433070:CDS
TAGGCCCTGAATGCTTAAAG+TGG 0.607415 tig0027224:+36642 None:intergenic
TTTCCAATCTACAAAACCAT+CGG 0.609430 tig0027224:-33034 Msa1433070:CDS
TATTTGAAGAATAATGGTGG+TGG 0.615793 tig0027224:+37916 None:intergenic
TAGTGGTTGGAAGTATAAGT+GGG 0.617001 tig0027224:+36381 None:intergenic
TCCTCCGCCATTGAAGTCGA+AGG 0.617006 tig0027224:+37832 None:intergenic
GTAAGACACTGAGCGGCCGT+TGG 0.620524 tig0027224:+33231 None:intergenic
CCAATTGTAGAAAATGGTGA+AGG 0.622581 tig0027224:-36173 Msa1433070:CDS
CTAGAAACCTGACTTCCTTG+TGG 0.628911 tig0027224:+36089 None:intergenic
AATCCAAACCCACCAAAACA+TGG 0.629227 tig0027224:+36507 None:intergenic
AGGTTCTAAATACTCGACTC+CGG 0.631900 tig0027224:-35919 Msa1433070:CDS
TAATCCTTCGACTTCAATGG+CGG 0.636314 tig0027224:-37836 Msa1433070:exon
ACATTGAACATCATGCTCCA+AGG 0.639562 tig0027224:+32950 None:intergenic
ACCATCGGAGTAGCGCACAT+TGG 0.642464 tig0027224:-33019 Msa1433070:exon
AAGGGAAAAGAACGAGCAGG+AGG 0.644457 tig0027224:-33115 Msa1433070:CDS
AGCTCAGAAGGAAAGTCCCG+AGG 0.651825 tig0027224:-36252 Msa1433070:CDS
GAAAAGTGCTCAGCACTACA+CGG 0.656728 tig0027224:-36750 Msa1433070:CDS
GTGCACTCTATTGAGTGTGA+AGG 0.658270 tig0027224:+32765 None:intergenic
ATCTATTTGAAGAATAATGG+TGG 0.661720 tig0027224:+37913 None:intergenic
TGTTCCTGAAAAGAGACCAA+CGG 0.664722 tig0027224:-33247 Msa1433070:CDS
CAAACGAGGTGGTTATCATG+CGG 0.669550 tig0027224:-37758 Msa1433070:CDS
ACTGAGGGCTCAAGAGTCCG+AGG 0.672144 tig0027224:+33186 None:intergenic
TTCGGAAGATGAAGGAACTG+AGG 0.673927 tig0027224:-37785 Msa1433070:CDS
CAGTGGTGAAAACTATGACA+GGG 0.675870 tig0027224:-35829 Msa1433070:CDS
ATCAAGTATAGTGATTATCG+TGG 0.676361 tig0027224:-36563 Msa1433070:CDS
GAAACTAAGGATGTTCCACA+AGG 0.679404 tig0027224:-36104 Msa1433070:CDS
TTACAAATGATATCCAGACT+AGG 0.679700 tig0027224:-35968 Msa1433070:CDS
AGGCTGTGGAAGTTAGTATG+GGG 0.683437 tig0027224:-33095 Msa1433070:CDS
AGCATGGATGCTATTCACTG+AGG 0.694541 tig0027224:+33170 None:intergenic
TAGGCAGTATAGATGTCCTG+AGG 0.713543 tig0027224:-35949 Msa1433070:CDS
GGAACTGAGGATTACAAACG+AGG 0.716479 tig0027224:-37772 Msa1433070:CDS
ACTGAGGATTACAAACGAGG+TGG 0.729665 tig0027224:-37769 Msa1433070:CDS
TGGATGAGTAAGACACTGAG+CGG 0.731118 tig0027224:+33224 None:intergenic
TGGTTCGTCTAGAAACCTAG+CGG 0.760118 tig0027224:-35102 Msa1433070:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAACTTGAAATTTGAAAT+AGG + tig0027224:32734-32753 None:intergenic 15.0%
!! ATAAATCAAAACAATGAAAA+GGG + tig0027224:32996-33015 None:intergenic 15.0%
!! AATAAATCAAAACAATGAAA+AGG + tig0027224:32997-33016 None:intergenic 15.0%
!!! TTTTCATTGTTTTGATTTAT+TGG - tig0027224:32996-33015 Msa1433070:three_prime_UTR 15.0%
!!! TAATTTTCTCAAATTATTAG+TGG + tig0027224:33469-33488 None:intergenic 15.0%
!!! TGAACTTCAAAATAAATTTT+TGG - tig0027224:34827-34846 Msa1433070:intron 15.0%
!! AAAAATAAGAAACATTTAGA+GGG - tig0027224:34913-34932 Msa1433070:intron 15.0%
!!! AAAAAATACTACTTTTAACT+TGG - tig0027224:35626-35645 Msa1433070:intron 15.0%
!!! TACTTTTCGTTTTTAAATTA+CGG + tig0027224:36266-36285 None:intergenic 15.0%
!!! TTCAATTATTTCTAAGTTAT+TGG - tig0027224:36713-36732 Msa1433070:CDS 15.0%
!!! TCAATTATTTCTAAGTTATT+GGG - tig0027224:36714-36733 Msa1433070:CDS 15.0%
!!! GAGAATATTTTATTGTTTTT+TGG - tig0027224:37896-37915 Msa1433070:five_prime_UTR 15.0%
!! TGAATCTATTTGAAGAATAA+TGG + tig0027224:32710-32729 None:intergenic 20.0%
!!! ATTATTGAGTTTAGTGTTTT+TGG - tig0027224:33054-33073 Msa1433070:CDS 20.0%
!!! TTATTGAGTTTAGTGTTTTT+GGG - tig0027224:33055-33074 Msa1433070:CDS 20.0%
!! GTCAAATTGAAACTAATATA+AGG - tig0027224:33203-33222 Msa1433070:CDS 20.0%
!! TTGAAACTAATATAAGGATT+AGG - tig0027224:33209-33228 Msa1433070:CDS 20.0%
!! TCATATATATTGTGTGTTAT+TGG - tig0027224:33701-33720 Msa1433070:intron 20.0%
!!! TTTATTTTGAAGTTCAAAAC+AGG + tig0027224:34823-34842 None:intergenic 20.0%
!! TTGTTTATATATGTTGTCTT+AGG - tig0027224:34874-34893 Msa1433070:intron 20.0%
!! GAAAAATAAGAAACATTTAG+AGG - tig0027224:34912-34931 Msa1433070:intron 20.0%
!!! ACATTTGTTTGTTAAAAAGT+TGG - tig0027224:34937-34956 Msa1433070:intron 20.0%
!!! AATTCTAAGACAAACTATTT+TGG + tig0027224:34994-35013 None:intergenic 20.0%
!!! AAATAGTTTGTCTTAGAATT+TGG - tig0027224:34994-35013 Msa1433070:intron 20.0%
!!! AATAGTTTGTCTTAGAATTT+GGG - tig0027224:34995-35014 Msa1433070:intron 20.0%
!!! ACACTTATAGACATATTTTT+AGG - tig0027224:35066-35085 Msa1433070:intron 20.0%
!! AAGTTATTAGTAAAAAAACG+TGG + tig0027224:35587-35606 None:intergenic 20.0%
!!! ATAAAGTGAAGACATTTTTT+AGG - tig0027224:35702-35721 Msa1433070:intron 20.0%
!! ATTATATAAACAAACTGACT+AGG - tig0027224:35735-35754 Msa1433070:intron 20.0%
!!! ATATTGAGTTATTTTAGAAG+AGG - tig0027224:35962-35981 Msa1433070:CDS 20.0%
!!! GCCTATACTTTTTTTTTATT+GGG - tig0027224:36658-36677 Msa1433070:CDS 20.0%
!!! CCTATACTTTTTTTTTATTG+GGG - tig0027224:36659-36678 Msa1433070:CDS 20.0%
!!! CTATACTTTTTTTTTATTGG+GGG - tig0027224:36660-36679 Msa1433070:CDS 20.0%
!!! CAATTATTTCTAAGTTATTG+GGG - tig0027224:36715-36734 Msa1433070:CDS 20.0%
!!! AATTATTTCTAAGTTATTGG+GGG - tig0027224:36716-36735 Msa1433070:CDS 20.0%
!!! ATCAATATGCAATATTTCTA+AGG + tig0027224:36757-36776 None:intergenic 20.0%
!!! GATTTTAAAATTTACTCTTC+AGG - tig0027224:36861-36880 Msa1433070:intron 20.0%
!! AGGATAATATGTATCTATAA+TGG + tig0027224:37066-37085 None:intergenic 20.0%
!!! AAATAATTGTTCAAGTTTTG+AGG + tig0027224:37174-37193 None:intergenic 20.0%
!!! TTTTATATGGTAAGTTTTGA+TGG - tig0027224:37643-37662 Msa1433070:intron 20.0%
!!! ATCATCCATAATGTTATTTT+AGG - tig0027224:37954-37973 Msa1433070:five_prime_UTR 20.0%
!! AAACTCCTAAAATAACATTA+TGG + tig0027224:37962-37981 None:intergenic 20.0%
! ATCTATTTGAAGAATAATGG+TGG + tig0027224:32707-32726 None:intergenic 25.0%
! ATTAAGCTTCAAACTAGTAT+TGG + tig0027224:32765-32784 None:intergenic 25.0%
!!! ATGCTTTTTCTTGTTTTCTA+TGG - tig0027224:33127-33146 Msa1433070:CDS 25.0%
! ATTGAAAACTCTACTAACAA+TGG - tig0027224:33803-33822 Msa1433070:intron 25.0%
! TTGAAAACTCTACTAACAAT+GGG - tig0027224:33804-33823 Msa1433070:intron 25.0%
!! AGCACTTTTCTGAATTTTTA+AGG + tig0027224:33857-33876 None:intergenic 25.0%
! AAACATGATAAAAGTTCGAA+TGG - tig0027224:34291-34310 Msa1433070:intron 25.0%
! GGTAAAATTGATAAGTTATG+TGG - tig0027224:34968-34987 Msa1433070:intron 25.0%
!! ATAGTTTGTCTTAGAATTTG+GGG - tig0027224:34996-35015 Msa1433070:intron 25.0%
! CTAACTTAAAACTACAAAAC+CGG - tig0027224:35021-35040 Msa1433070:intron 25.0%
!!! TCTGATACCATTTTAGAATT+TGG - tig0027224:35200-35219 Msa1433070:intron 25.0%
!!! CTGATACCATTTTAGAATTT+GGG - tig0027224:35201-35220 Msa1433070:intron 25.0%
!! ACTAGTTTGAGATATTAGTA+AGG - tig0027224:35230-35249 Msa1433070:intron 25.0%
!! TTTTTGATCTAGTAAACATG+AGG - tig0027224:35274-35293 Msa1433070:intron 25.0%
!! TTTTGATCTAGTAAACATGA+GGG - tig0027224:35275-35294 Msa1433070:intron 25.0%
! AATCTAAACACAGTGAATTT+AGG + tig0027224:35361-35380 None:intergenic 25.0%
!!! TTCATGCTTTTGAGTTATAT+AGG - tig0027224:35416-35435 Msa1433070:intron 25.0%
!! CATAAGATACTTTTCCAAAA+GGG + tig0027224:35497-35516 None:intergenic 25.0%
!!! TTGAACTTGTTTTTGTTTCT+TGG - tig0027224:35775-35794 Msa1433070:intron 25.0%
! AAATTTACTAAAACTCAGAC+TGG + tig0027224:35869-35888 None:intergenic 25.0%
!! GTAAATTTTCACAATCTTTC+TGG - tig0027224:35881-35900 Msa1433070:CDS 25.0%
! CTTTATAACTCAATATATCC+AGG - tig0027224:36128-36147 Msa1433070:CDS 25.0%
!! ACTGTGTATTTCATTTTACA+TGG + tig0027224:36167-36186 None:intergenic 25.0%
! AGTACTCAAAAACATACAAT+CGG + tig0027224:36207-36226 None:intergenic 25.0%
!! ACATTTTCTTCAAGTATGTA+CGG - tig0027224:36566-36585 Msa1433070:CDS 25.0%
!!! GGCCTATACTTTTTTTTTAT+TGG - tig0027224:36657-36676 Msa1433070:CDS 25.0%
!! CCCCAATAAAAAAAAAGTAT+AGG + tig0027224:36662-36681 None:intergenic 25.0%
! GAAATAATTGAACTGTACAA+TGG + tig0027224:36705-36724 None:intergenic 25.0%
!! GCAATATTTCTAAGGAAATA+AGG + tig0027224:36749-36768 None:intergenic 25.0%
! CTTACCATATAAAAAGTAAC+AGG + tig0027224:37637-37656 None:intergenic 25.0%
! TTATAAGCATTATGTGCAAA+TGG - tig0027224:37700-37719 Msa1433070:CDS 25.0%
! TATAAGCATTATGTGCAAAT+GGG - tig0027224:37701-37720 Msa1433070:CDS 25.0%
!!! TTTTTGAGTTGTGTTTGGTT+TGG + tig0027224:32610-32629 None:intergenic 30.0%
TTCAGTGAATGGGAAAATTA+GGG + tig0027224:32633-32652 None:intergenic 30.0%
ATTCAGTGAATGGGAAAATT+AGG + tig0027224:32634-32653 None:intergenic 30.0%
TATTTGAAGAATAATGGTGG+TGG + tig0027224:32704-32723 None:intergenic 30.0%
! ATTGGTGACACTTTCAAAAA+TGG - tig0027224:32887-32906 Msa1433070:three_prime_UTR 30.0%
! TTGGTGACACTTTCAAAAAT+GGG - tig0027224:32888-32907 Msa1433070:three_prime_UTR 30.0%
!!! TTAGTGTTTTTGGGTTATGA+AGG - tig0027224:33064-33083 Msa1433070:CDS 30.0%
!!! TAGTGTTTTTGGGTTATGAA+GGG - tig0027224:33065-33084 Msa1433070:CDS 30.0%
TTGAATGTAACTACAAGTCT+CGG - tig0027224:33327-33346 Msa1433070:CDS 30.0%
TCTCAAATTATTAGTGGTGT+CGG + tig0027224:33463-33482 None:intergenic 30.0%
TTCAGTGTAATTACAAGTGT+CGG - tig0027224:33494-33513 Msa1433070:intron 30.0%
GAAACTAGAAAGAGAATCAA+GGG + tig0027224:33669-33688 None:intergenic 30.0%
AGAAACTAGAAAGAGAATCA+AGG + tig0027224:33670-33689 None:intergenic 30.0%
!! CTCTTTCTAGTTTCTTTAGT+TGG - tig0027224:33675-33694 Msa1433070:intron 30.0%
!! TTTCTAGTTTCTTTAGTTGG+TGG - tig0027224:33678-33697 Msa1433070:intron 30.0%
! GTTATTGGAGTTCTTTTCAT+TGG - tig0027224:33716-33735 Msa1433070:CDS 30.0%
TGAAAACTCTACTAACAATG+GGG - tig0027224:33805-33824 Msa1433070:intron 30.0%
ATTCTCAAACAAATTGCTGA+AGG - tig0027224:33913-33932 Msa1433070:intron 30.0%
TTCTCAAACAAATTGCTGAA+GGG - tig0027224:33914-33933 Msa1433070:intron 30.0%
! TGTATGGTTTTTGAATTCCT+TGG - tig0027224:34012-34031 Msa1433070:intron 30.0%
! GTATGGTTTTTGAATTCCTT+GGG - tig0027224:34013-34032 Msa1433070:intron 30.0%
! TATGGTTTTTGAATTCCTTG+GGG - tig0027224:34014-34033 Msa1433070:intron 30.0%
ATCAAGTATAGTGATTATCG+TGG - tig0027224:34054-34073 Msa1433070:intron 30.0%
TAGCAAATTTCTTTGACCAT+GGG + tig0027224:34090-34109 None:intergenic 30.0%
!!! AGAAATTTGCTACCATGTTT+TGG - tig0027224:34098-34117 Msa1433070:intron 30.0%
!!! GATTTTCTAGGATCTTTAGA+TGG + tig0027224:34210-34229 None:intergenic 30.0%
TCTAAAGATCCTAGAAAATC+AGG - tig0027224:34210-34229 Msa1433070:intron 30.0%
! CGAACTTTTATCATGTTTTG+TGG + tig0027224:34289-34308 None:intergenic 30.0%
TTACTACAATCATCTTGTTC+AGG + tig0027224:34414-34433 None:intergenic 30.0%
GTGAAACCAATTGTAGAAAA+TGG - tig0027224:34438-34457 Msa1433070:intron 30.0%
TTACAAATGATATCCAGACT+AGG - tig0027224:34649-34668 Msa1433070:intron 30.0%
GTTAAAAAGTTGGATCAAGT+TGG - tig0027224:34947-34966 Msa1433070:intron 30.0%
!!! CGGTTTTGTAGTTTTAAGTT+AGG + tig0027224:35023-35042 None:intergenic 30.0%
! CCTTAACCCAAATTCTAAAA+TGG + tig0027224:35210-35229 None:intergenic 30.0%
!!! CCATTTTAGAATTTGGGTTA+AGG - tig0027224:35207-35226 Msa1433070:intron 30.0%
GTTTACTAGATCAAAAAGCA+AGG + tig0027224:35271-35290 None:intergenic 30.0%
! ATTTCTATCTTTTGCCCTTT+TGG - tig0027224:35480-35499 Msa1433070:intron 30.0%
! CCATAAGATACTTTTCCAAA+AGG + tig0027224:35498-35517 None:intergenic 30.0%
!!! CCTTTTGGAAAAGTATCTTA+TGG - tig0027224:35495-35514 Msa1433070:intron 30.0%
AACACAAGACAATTTCTGAT+TGG + tig0027224:35549-35568 None:intergenic 30.0%
CAGAAATTGTCTTGTGTTAA+TGG - tig0027224:35551-35570 Msa1433070:intron 30.0%
GGTCATTGTGATTTAATCTA+TGG - tig0027224:35647-35666 Msa1433070:intron 30.0%
! TGAAAAGCGAAAAGTTTTCA+TGG + tig0027224:36010-36029 None:intergenic 30.0%
! ATTTCATTTTACATGGCAGA+AGG + tig0027224:36160-36179 None:intergenic 30.0%
CTCTCAATATTATCAAGATC+TGG - tig0027224:36636-36655 Msa1433070:CDS 30.0%
! TGTATTTCAGACTTTTCAGT+GGG + tig0027224:36796-36815 None:intergenic 30.0%
GGAGTAACTGAATAATATGA+GGG + tig0027224:37045-37064 None:intergenic 30.0%
TGGAGTAACTGAATAATATG+AGG + tig0027224:37046-37065 None:intergenic 30.0%
AGAAAGAGAGTAGATACAAT+AGG + tig0027224:37093-37112 None:intergenic 30.0%
! TATTTTGTTCAGATTGCTCT+TGG - tig0027224:37189-37208 Msa1433070:intron 30.0%
TTTCCAATCTACAAAACCAT+CGG - tig0027224:37583-37602 Msa1433070:intron 30.0%
!!! GCAACCTGTTACTTTTTATA+TGG - tig0027224:37630-37649 Msa1433070:intron 30.0%
TTTACAAGAAGTGAAAGAAG+TGG + tig0027224:37813-37832 None:intergenic 30.0%
! TTCTTGTAAAAGTGTGTAGA+AGG - tig0027224:37823-37842 Msa1433070:CDS 30.0%
!!! TTGTTGTTTTTGTTGTTGCC+GGG + tig0027224:32584-32603 None:intergenic 35.0%
!!! CTTGTTGTTTTTGTTGTTGC+CGG + tig0027224:32585-32604 None:intergenic 35.0%
!!! TAGGGTTTTTGAGTTGTGTT+TGG + tig0027224:32615-32634 None:intergenic 35.0%
AAACCTCGAATTCAGTGAAT+GGG + tig0027224:32643-32662 None:intergenic 35.0%
AAAACCTCGAATTCAGTGAA+TGG + tig0027224:32644-32663 None:intergenic 35.0%
TATGTTGTTCAGAGTAAGCT+TGG - tig0027224:32914-32933 Msa1433070:three_prime_UTR 35.0%
TAGGTTGTGTGTGTTTAGTT+TGG - tig0027224:33601-33620 Msa1433070:intron 35.0%
! ACTATGTTTGTTGAAAGCCT+AGG - tig0027224:33757-33776 Msa1433070:intron 35.0%
TCTCAAACAAATTGCTGAAG+GGG - tig0027224:33915-33934 Msa1433070:intron 35.0%
! GAAATGTGTTGTGAAGCTTT+TGG - tig0027224:33951-33970 Msa1433070:intron 35.0%
ATACAAACATGCTGACCATT+AGG + tig0027224:33997-34016 None:intergenic 35.0%
TAATGGTCAGCATGTTTGTA+TGG - tig0027224:33996-34015 Msa1433070:intron 35.0%
AATTTCTTTGACCATGGGAA+GGG + tig0027224:34085-34104 None:intergenic 35.0%
AAATTTCTTTGACCATGGGA+AGG + tig0027224:34086-34105 None:intergenic 35.0%
GTAGCAAATTTCTTTGACCA+TGG + tig0027224:34091-34110 None:intergenic 35.0%
!!! AATTTGCTACCATGTTTTGG+TGG - tig0027224:34101-34120 Msa1433070:intron 35.0%
!!! ATTTGCTACCATGTTTTGGT+GGG - tig0027224:34102-34121 Msa1433070:intron 35.0%
! GAGACAAGCAAAACATTTTC+TGG + tig0027224:34177-34196 None:intergenic 35.0%
GGATCTTTAGATGGATCTAT+TGG + tig0027224:34201-34220 None:intergenic 35.0%
! TAGTGGTTGGAAGTATAAGT+GGG + tig0027224:34239-34258 None:intergenic 35.0%
! TTAGTGGTTGGAAGTATAAG+TGG + tig0027224:34240-34259 None:intergenic 35.0%
!!! CATCTTCTTTTTCTGGTTCT+TGG + tig0027224:34325-34344 None:intergenic 35.0%
AGAACCAGAAAAAGAAGATG+CGG - tig0027224:34325-34344 Msa1433070:intron 35.0%
! TTTTCCGCATCTTCTTTTTC+TGG + tig0027224:34332-34351 None:intergenic 35.0%
GAAAAAGAAGATGCGGAAAA+AGG - tig0027224:34332-34351 Msa1433070:intron 35.0%
! CCTTCACCATTTTCTACAAT+TGG + tig0027224:34447-34466 None:intergenic 35.0%
CCAATTGTAGAAAATGGTGA+AGG - tig0027224:34444-34463 Msa1433070:intron 35.0%
TCTTTACTTGTGGGACTATT+AGG + tig0027224:34474-34493 None:intergenic 35.0%
! GCTGATTCATCTTTACTTGT+GGG + tig0027224:34483-34502 None:intergenic 35.0%
!! TGCTGATTCATCTTTACTTG+TGG + tig0027224:34484-34503 None:intergenic 35.0%
!! AGCAATGACTTCTGAAACTA+AGG - tig0027224:34500-34519 Msa1433070:intron 35.0%
!! TGGATTTTGGAAATGCTTGT+TGG - tig0027224:34613-34632 Msa1433070:intron 35.0%
GAGATATTAGTAAGGACGTT+AGG - tig0027224:35238-35257 Msa1433070:intron 35.0%
! AAACATGAGGGAAGTTTTTG+TGG - tig0027224:35287-35306 Msa1433070:intron 35.0%
! TGGAAGCTATTTGACTTTGA+TGG - tig0027224:35323-35342 Msa1433070:intron 35.0%
! GGAAGCTATTTGACTTTGAT+GGG - tig0027224:35324-35343 Msa1433070:intron 35.0%
TGGAATATTATGAGCGTGTT+TGG - tig0027224:35795-35814 Msa1433070:intron 35.0%
ATATTATGAGCGTGTTTGGA+AGG - tig0027224:35799-35818 Msa1433070:intron 35.0%
TATTATGAGCGTGTTTGGAA+GGG - tig0027224:35800-35819 Msa1433070:intron 35.0%
AGTAGTATAGGGAAGTCTAA+GGG + tig0027224:36333-36352 None:intergenic 35.0%
ACCACGATAAAGTTCGTTAT+AGG - tig0027224:36361-36380 Msa1433070:CDS 35.0%
ACCTATAACGAACTTTATCG+TGG + tig0027224:36365-36384 None:intergenic 35.0%
! ACATGCTTACGTAGCAATTT+TGG - tig0027224:36534-36553 Msa1433070:CDS 35.0%
! CATGCTTACGTAGCAATTTT+GGG - tig0027224:36535-36554 Msa1433070:CDS 35.0%
! ATGCTTACGTAGCAATTTTG+GGG - tig0027224:36536-36555 Msa1433070:CDS 35.0%
! TCTAGAGTAAACCACCAAAT+TGG - tig0027224:36594-36613 Msa1433070:CDS 35.0%
TACAAAGACATGGACCAATT+TGG + tig0027224:36611-36630 None:intergenic 35.0%
GAGAGTGAATTACAAAGACA+TGG + tig0027224:36621-36640 None:intergenic 35.0%
! CTGTATTTCAGACTTTTCAG+TGG + tig0027224:36797-36816 None:intergenic 35.0%
! AAAAGTCTGAAATACAGCTG+TGG - tig0027224:36800-36819 Msa1433070:intron 35.0%
ATTTACTCTTCAGGATCATC+TGG - tig0027224:36870-36889 Msa1433070:intron 35.0%
TTTGCATGTTGATATGCACA+AGG - tig0027224:36983-37002 Msa1433070:intron 35.0%
GAGTAGATACAATAGGATCA+AGG + tig0027224:37086-37105 None:intergenic 35.0%
CAGATCTATTGAAAAAGTCC+CGG + tig0027224:37226-37245 None:intergenic 35.0%
!! GCCTATTACTAAGGTTTTGA+CGG - tig0027224:37280-37299 Msa1433070:intron 35.0%
TCCGTCAAAACCTTAGTAAT+AGG + tig0027224:37284-37303 None:intergenic 35.0%
TCAGGAACAAAGTCAAGTAA+CGG + tig0027224:37359-37378 None:intergenic 35.0%
ATCCATGCTGATGCTATTAA+CGG - tig0027224:37461-37480 Msa1433070:intron 35.0%
AGAAAAGCCTGGAAAGTTAA+GGG - tig0027224:37484-37503 Msa1433070:intron 35.0%
! TTCTTTTCCCTTAACTTTCC+AGG + tig0027224:37494-37513 None:intergenic 35.0%
TGGAAATCTTTGAGTGTCTT+TGG + tig0027224:37569-37588 None:intergenic 35.0%
TGGCATAACTCCATTGTAAT+AGG + tig0027224:37793-37812 None:intergenic 35.0%
GATGATGAGCATCTAATCTA+GGG + tig0027224:37940-37959 None:intergenic 35.0%
TTTCCCATTCACTGAATTCG+AGG - tig0027224:32637-32656 Msa1433070:three_prime_UTR 40.0%
TTGGAGTGAAATTGAGGGAA+AGG + tig0027224:32667-32686 None:intergenic 40.0%
!! TTGGGTTGGAGTGAAATTGA+GGG + tig0027224:32672-32691 None:intergenic 40.0%
!! ATTGGGTTGGAGTGAAATTG+AGG + tig0027224:32673-32692 None:intergenic 40.0%
GCTTAATCCTTCGACTTCAA+TGG - tig0027224:32778-32797 Msa1433070:three_prime_UTR 40.0%
TAATCCTTCGACTTCAATGG+CGG - tig0027224:32781-32800 Msa1433070:three_prime_UTR 40.0%
AGATGCGAGTGATTACAGTT+CGG - tig0027224:32814-32833 Msa1433070:three_prime_UTR 40.0%
GATTACAGTTCGGAAGATGA+AGG - tig0027224:32824-32843 Msa1433070:three_prime_UTR 40.0%
!!! GGGGTCATTTTTCAACTGTT+TGG - tig0027224:32939-32958 Msa1433070:three_prime_UTR 40.0%
! ATGATGCACCGACATATACA+CGG - tig0027224:33247-33266 Msa1433070:CDS 40.0%
TATGTAGCACCAATGAAGCA+CGG + tig0027224:33583-33602 None:intergenic 40.0%
! TCAGAGCATGTTTGTTACCT+AGG + tig0027224:33777-33796 None:intergenic 40.0%
TTGGACCACTTTAAGCATTC+AGG - tig0027224:33970-33989 Msa1433070:intron 40.0%
TGGACCACTTTAAGCATTCA+GGG - tig0027224:33971-33990 Msa1433070:intron 40.0%
TTTAAGCATTCAGGGCCTAA+TGG - tig0027224:33979-33998 Msa1433070:intron 40.0%
ATTTCTTTGACCATGGGAAG+GGG + tig0027224:34084-34103 None:intergenic 40.0%
AATCCAAACCCACCAAAACA+TGG + tig0027224:34113-34132 None:intergenic 40.0%
ACAGTCTTGACTTTAGTGGT+TGG + tig0027224:34252-34271 None:intergenic 40.0%
GGATACAGTCTTGACTTTAG+TGG + tig0027224:34256-34275 None:intergenic 40.0%
GTCAAGACTGTATCCAAGAA+CGG - tig0027224:34261-34280 Msa1433070:intron 40.0%
TCAAGACTGTATCCAAGAAC+GGG - tig0027224:34262-34281 Msa1433070:intron 40.0%
GAAACTAAGGATGTTCCACA+AGG - tig0027224:34513-34532 Msa1433070:intron 40.0%
TGATCTTAAGTGCAAGCTTG+TGG - tig0027224:34593-34612 Msa1433070:intron 40.0%
! AAGTGCAAGCTTGTGGATTT+TGG - tig0027224:34600-34619 Msa1433070:intron 40.0%
TTAGAACCTAGAAGAACCTC+AGG + tig0027224:34687-34706 None:intergenic 40.0%
!! AGGTTCTAAATACTCGACTC+CGG - tig0027224:34698-34717 Msa1433070:intron 40.0%
CTCAAAGCATATGCAAGCAA+AGG + tig0027224:34736-34755 None:intergenic 40.0%
ATCAAAAAGAACATCGCCAG+TGG + tig0027224:34763-34782 None:intergenic 40.0%
! GTTCTTTTTGATCCTCACAG+TGG - tig0027224:34771-34790 Msa1433070:intron 40.0%
! TCATAGTTTTCACCACTGTG+AGG + tig0027224:34786-34805 None:intergenic 40.0%
ACAGTGGTGAAAACTATGAC+AGG - tig0027224:34787-34806 Msa1433070:intron 40.0%
CAGTGGTGAAAACTATGACA+GGG - tig0027224:34788-34807 Msa1433070:intron 40.0%
TGAAAACTATGACAGGGATG+AGG - tig0027224:34794-34813 Msa1433070:intron 40.0%
!! AACTACAAAACCGGCTTGTA+AGG - tig0027224:35030-35049 Msa1433070:intron 40.0%
!! TAAAAGTACCACATCGGATG+AGG + tig0027224:35097-35116 None:intergenic 40.0%
!! GGGTGTTAAAAGTACCACAT+CGG + tig0027224:35103-35122 None:intergenic 40.0%
!!! TTTGTGGTGATGGCATGTTT+TGG - tig0027224:35303-35322 Msa1433070:intron 40.0%
AACTCAATATATCCAGGCAG+AGG - tig0027224:36134-36153 Msa1433070:CDS 40.0%
CAGTAGTATAGGGAAGTCTA+AGG + tig0027224:36334-36353 None:intergenic 40.0%
GGTTTGTCGTCAGTAGTATA+GGG + tig0027224:36344-36363 None:intergenic 40.0%
! TGGTTTGTCGTCAGTAGTAT+AGG + tig0027224:36345-36364 None:intergenic 40.0%
TTTCGTCTACTCCTTGTTAC+TGG - tig0027224:36413-36432 Msa1433070:CDS 40.0%
TACTCCTTGTTACTGGAGAT+AGG - tig0027224:36420-36439 Msa1433070:CDS 40.0%
TGTTCCTATCTCCAGTAACA+AGG + tig0027224:36427-36446 None:intergenic 40.0%
GTTACTGGAGATAGGAACAA+AGG - tig0027224:36428-36447 Msa1433070:CDS 40.0%
GGAGATAGGAACAAAGGTTA+AGG - tig0027224:36434-36453 Msa1433070:CDS 40.0%
AAAGACATGGACCAATTTGG+TGG + tig0027224:36608-36627 None:intergenic 40.0%
!! CATTGATGATGGAGCTTCTT+GGG - tig0027224:36893-36912 Msa1433070:intron 40.0%
!! ATTGATGATGGAGCTTCTTG+GGG - tig0027224:36894-36913 Msa1433070:intron 40.0%
TTTGTTCAGATTGCTCTTGG+CGG - tig0027224:37192-37211 Msa1433070:intron 40.0%
TTGAAAAAGTCCCGGAATAG+CGG + tig0027224:37218-37237 None:intergenic 40.0%
!!! CGGGACTTTTTCAATAGATC+TGG - tig0027224:37224-37243 Msa1433070:intron 40.0%
! CAAAGTCAAGTAACGGAACA+AGG + tig0027224:37352-37371 None:intergenic 40.0%
TGTTCCTGAAAAGAGACCAA+CGG - tig0027224:37370-37389 Msa1433070:intron 40.0%
GAGAAAAGCCTGGAAAGTTA+AGG - tig0027224:37483-37502 Msa1433070:intron 40.0%
ATGGGGAATATGACCATTGA+TGG - tig0027224:37539-37558 Msa1433070:intron 40.0%
! TGTCTTTGGAGATCCATCAA+TGG + tig0027224:37555-37574 None:intergenic 40.0%
!!! ACTCCGATGGTTTTGTAGAT+TGG + tig0027224:37589-37608 None:intergenic 40.0%
!! TGGTAAGTTTTGATGGTCCT+TGG - tig0027224:37650-37669 Msa1433070:intron 40.0%
ACATTGAACATCATGCTCCA+AGG + tig0027224:37670-37689 None:intergenic 40.0%
GCAAATGGGTCATACTTAAG+AGG - tig0027224:37715-37734 Msa1433070:CDS 40.0%
GGGTCATACTTAAGAGGTTA+TGG - tig0027224:37721-37740 Msa1433070:CDS 40.0%
TGGTTTGAGAAACCCTTCAT+AGG - tig0027224:37741-37760 Msa1433070:CDS 40.0%
GGTTTGAGAAACCCTTCATA+GGG - tig0027224:37742-37761 Msa1433070:CDS 40.0%
TGGATGGAAGCCTATTACAA+TGG - tig0027224:37780-37799 Msa1433070:CDS 40.0%
GGATGATGAGCATCTAATCT+AGG + tig0027224:37941-37960 None:intergenic 40.0%
!! TGGTGGTGGATGAGAAGATT+GGG + tig0027224:32690-32709 None:intergenic 45.0%
!! ATGGTGGTGGATGAGAAGAT+TGG + tig0027224:32691-32710 None:intergenic 45.0%
TTCGGAAGATGAAGGAACTG+AGG - tig0027224:32832-32851 Msa1433070:three_prime_UTR 45.0%
GGAACTGAGGATTACAAACG+AGG - tig0027224:32845-32864 Msa1433070:three_prime_UTR 45.0%
ACTGAGGATTACAAACGAGG+TGG - tig0027224:32848-32867 Msa1433070:three_prime_UTR 45.0%
CAAACGAGGTGGTTATCATG+CGG - tig0027224:32859-32878 Msa1433070:three_prime_UTR 45.0%
GGTTATCATGCGGTTCAGAT+TGG - tig0027224:32869-32888 Msa1433070:three_prime_UTR 45.0%
TTGTTCAGAGTAAGCTTGGC+TGG - tig0027224:32918-32937 Msa1433070:three_prime_UTR 45.0%
TGTTCAGAGTAAGCTTGGCT+GGG - tig0027224:32919-32938 Msa1433070:three_prime_UTR 45.0%
! TTTCAACTGTTTGGCTCGCT+TGG - tig0027224:32948-32967 Msa1433070:three_prime_UTR 45.0%
! TTCAACTGTTTGGCTCGCTT+GGG - tig0027224:32949-32968 Msa1433070:three_prime_UTR 45.0%
CGCTTGGGATACTCTCAAAT+TGG - tig0027224:32964-32983 Msa1433070:three_prime_UTR 45.0%
ATATACACGGACACCGGATA+TGG - tig0027224:33260-33279 Msa1433070:CDS 45.0%
CGACATGTCATTGCCATATC+CGG + tig0027224:33276-33295 None:intergenic 45.0%
GACCAATGTCCAACACATGT+CGG + tig0027224:33367-33386 None:intergenic 45.0%
GACATTGGTCACACCTTTGA+TGG - tig0027224:33377-33396 Msa1433070:CDS 45.0%
! CACACCTTTGATGGAAGTGT+TGG - tig0027224:33386-33405 Msa1433070:CDS 45.0%
GTGCCTATGAAGCATGGATA+CGG - tig0027224:33408-33427 Msa1433070:CDS 45.0%
TGTCCGTATCCATGCTTCAT+AGG + tig0027224:33414-33433 None:intergenic 45.0%
!! TACAAGTGTCGGTGTTGTGT+CGG - tig0027224:33505-33524 Msa1433070:intron 45.0%
!! GTGCTTCATTGGTGCTACAT+AGG - tig0027224:33582-33601 Msa1433070:intron 45.0%
!! GAAAAGTGCTCAGCACTACA+CGG - tig0027224:33867-33886 Msa1433070:intron 45.0%
AATTGCTGAAGGGGATCTAG+AGG - tig0027224:33924-33943 Msa1433070:intron 45.0%
TAGGCCCTGAATGCTTAAAG+TGG + tig0027224:33978-33997 None:intergenic 45.0%
GTGTAAGAAGATTGTCCCCA+AGG + tig0027224:34032-34051 None:intergenic 45.0%
!!! CTACCATGTTTTGGTGGGTT+TGG - tig0027224:34107-34126 Msa1433070:intron 45.0%
! AGTGGGACTCCTGATTTTCT+AGG + tig0027224:34222-34241 None:intergenic 45.0%
! ATGTTTTGTGGTCCCGTTCT+TGG + tig0027224:34277-34296 None:intergenic 45.0%
GGCTAAAAAAGCAGCTCAGA+AGG - tig0027224:34353-34372 Msa1433070:intron 45.0%
CTAGAAACCTGACTTCCTTG+TGG + tig0027224:34531-34550 None:intergenic 45.0%
CACAAGGAAGTCAGGTTTCT+AGG - tig0027224:34529-34548 Msa1433070:intron 45.0%
GACATCTATACTGCCTAGTC+TGG + tig0027224:34665-34684 None:intergenic 45.0%
TAGGCAGTATAGATGTCCTG+AGG - tig0027224:34668-34687 Msa1433070:intron 45.0%
AGATGTCCTGAGGTTCTTCT+AGG - tig0027224:34678-34697 Msa1433070:intron 45.0%
! ATATGCTTTGAGCTTGCCAC+TGG - tig0027224:34744-34763 Msa1433070:intron 45.0%
!! TACAAAACCGGCTTGTAAGG+TGG - tig0027224:35033-35052 Msa1433070:intron 45.0%
!! ACAAAACCGGCTTGTAAGGT+GGG - tig0027224:35034-35053 Msa1433070:intron 45.0%
! GAGGGAAGTTTTTGTGGTGA+TGG - tig0027224:35293-35312 Msa1433070:intron 45.0%
TGGTTCGTCTAGAAACCTAG+CGG - tig0027224:35515-35534 Msa1433070:intron 45.0%
TGTGTTTGGATGGAGGGTTT+AGG + tig0027224:36310-36329 None:intergenic 45.0%
! TAAGGGTGTGTTTGGATGGA+GGG + tig0027224:36316-36335 None:intergenic 45.0%
! AGTCTAAGGGTGTGTTTGGA+TGG + tig0027224:36320-36339 None:intergenic 45.0%
!! GGATCATCTGGCATTGATGA+TGG - tig0027224:36882-36901 Msa1433070:intron 45.0%
!! GCATTGATGATGGAGCTTCT+TGG - tig0027224:36892-36911 Msa1433070:intron 45.0%
! GTGATTTGAGACACATTCGC+CGG - tig0027224:37246-37265 Msa1433070:intron 45.0%
TGGATGAGTAAGACACTGAG+CGG + tig0027224:37396-37415 None:intergenic 45.0%
CTCAGTGTCTTACTCATCCA+TGG - tig0027224:37396-37415 Msa1433070:intron 45.0%
GCATGGATGCTATTCACTGA+GGG + tig0027224:37449-37468 None:intergenic 45.0%
AGCATGGATGCTATTCACTG+AGG + tig0027224:37450-37469 None:intergenic 45.0%
CTCCGTTAATAGCATCAGCA+TGG + tig0027224:37466-37485 None:intergenic 45.0%
GCTATTAACGGAGAAAAGCC+TGG - tig0027224:37473-37492 Msa1433070:intron 45.0%
GTTAAGGGAAAAGAACGAGC+AGG - tig0027224:37499-37518 Msa1433070:intron 45.0%
GAGGCTGTGGAAGTTAGTAT+GGG - tig0027224:37521-37540 Msa1433070:intron 45.0%
AGGCTGTGGAAGTTAGTATG+GGG - tig0027224:37522-37541 Msa1433070:intron 45.0%
TGAGAAACCCTTCATAGGGT+AGG - tig0027224:37746-37765 Msa1433070:CDS 45.0%
GAGAAACCCTTCATAGGGTA+GGG - tig0027224:37747-37766 Msa1433070:CDS 45.0%
GTGCACTCTATTGAGTGTGA+AGG + tig0027224:37855-37874 None:intergenic 45.0%
!!! ATGTTTTTTAATATAATTTT+TGG + tig0027224:36390-36409 None:intergenic 5.0%
GGTGGATGAGAAGATTGGGT+TGG + tig0027224:32686-32705 None:intergenic 50.0%
GTTCAGAGTAAGCTTGGCTG+GGG - tig0027224:32920-32939 Msa1433070:three_prime_UTR 50.0%
ACCGACATATACACGGACAC+CGG - tig0027224:33254-33273 Msa1433070:CDS 50.0%
TCCGGTGTCCGTGTATATGT+CGG + tig0027224:33258-33277 None:intergenic 50.0%
TGTCAGAGTCCGACATGTGT+TGG - tig0027224:33355-33374 Msa1433070:CDS 50.0%
GTCCGACATGTGTTGGACAT+TGG - tig0027224:33362-33381 Msa1433070:CDS 50.0%
GGCACCAACACTTCCATCAA+AGG + tig0027224:33393-33412 None:intergenic 50.0%
! GTGTTGGTGCCTATGAAGCA+TGG - tig0027224:33402-33421 Msa1433070:CDS 50.0%
TGAAGCATGGATACGGACAC+CGG - tig0027224:33415-33434 Msa1433070:CDS 50.0%
ACACGACACATGTCCAACAC+TGG - tig0027224:33534-33553 Msa1433070:intron 50.0%
CACGACACATGTCCAACACT+GGG - tig0027224:33535-33554 Msa1433070:intron 50.0%
GATTATGCGTGTCCCAGTGT+TGG + tig0027224:33550-33569 None:intergenic 50.0%
GACACGCATAATCCGAGAAG+TGG - tig0027224:33557-33576 Msa1433070:intron 50.0%
AATGAAGCACGGCCACTTCT+CGG + tig0027224:33572-33591 None:intergenic 50.0%
GGATGTTCCACAAGGAAGTC+AGG - tig0027224:34521-34540 Msa1433070:intron 50.0%
! GGAAGTCAGGTTTCTAGGAG+AGG - tig0027224:34534-34553 Msa1433070:intron 50.0%
GCAAAGGACCACATATCTGC+CGG + tig0027224:34720-34739 None:intergenic 50.0%
!! CAAAACCGGCTTGTAAGGTG+GGG - tig0027224:35035-35054 Msa1433070:intron 50.0%
TCATTCCCCACCTTACAAGC+CGG + tig0027224:35043-35062 None:intergenic 50.0%
GTACCACATCGGATGAGGTA+TGG + tig0027224:35092-35111 None:intergenic 50.0%
CGTGATGAGTGACTCGATAG+CGG - tig0027224:35152-35171 Msa1433070:intron 50.0%
TGACCCAGCAGATCTCATGT+AGG - tig0027224:35176-35195 Msa1433070:intron 50.0%
GAGCCTACATGAGATCTGCT+GGG + tig0027224:35182-35201 None:intergenic 50.0%
AGAGCCTACATGAGATCTGC+TGG + tig0027224:35183-35202 None:intergenic 50.0%
TGATTGGCAACACTTCCGCT+AGG + tig0027224:35533-35552 None:intergenic 50.0%
TGGAGGGTTTAGGAGGTGAA+GGG + tig0027224:36300-36319 None:intergenic 50.0%
ATGGAGGGTTTAGGAGGTGA+AGG + tig0027224:36301-36320 None:intergenic 50.0%
GTTTGGATGGAGGGTTTAGG+AGG + tig0027224:36307-36326 None:intergenic 50.0%
! CTAAGGGTGTGTTTGGATGG+AGG + tig0027224:36317-36336 None:intergenic 50.0%
! GGGAAGTCTAAGGGTGTGTT+TGG + tig0027224:36324-36343 None:intergenic 50.0%
CCTAATATGCCTACCTTGCG+AGG + tig0027224:36925-36944 None:intergenic 50.0%
CCTCGCAAGGTAGGCATATT+AGG - tig0027224:36922-36941 Msa1433070:intron 50.0%
TAATAGGCCAGAACCGCAAC+CGG + tig0027224:37268-37287 None:intergenic 50.0%
! GCGGTTCTGGCCTATTACTA+AGG - tig0027224:37271-37290 Msa1433070:intron 50.0%
ACTCATCCATGGATGAGTGC+AGG - tig0027224:37407-37426 Msa1433070:intron 50.0%
AAGGGAAAAGAACGAGCAGG+AGG - tig0027224:37502-37521 Msa1433070:intron 50.0%
GGAGGCTGTGGAAGTTAGTA+TGG - tig0027224:37520-37539 Msa1433070:intron 50.0%
CTCTTGCCCTACCCTATGAA+GGG + tig0027224:37756-37775 None:intergenic 50.0%
TCTCTTGCCCTACCCTATGA+AGG + tig0027224:37757-37776 None:intergenic 50.0%
TCCTTCGACTTCAATGGCGG+AGG - tig0027224:32784-32803 Msa1433070:three_prime_UTR 55.0%
TCCTCCGCCATTGAAGTCGA+AGG + tig0027224:32788-32807 None:intergenic 55.0%
GTCAGTGTCTGTGTCGTGTC+CGG + tig0027224:33437-33456 None:intergenic 55.0%
GAGAAGTGGCCGTGCTTCAT+TGG - tig0027224:33571-33590 Msa1433070:intron 55.0%
TGCTCAGCACTACACGGAAG+CGG - tig0027224:33873-33892 Msa1433070:intron 55.0%
TCGTGGTATTCCCCTTCCCA+TGG - tig0027224:34071-34090 Msa1433070:intron 55.0%
AGCTCAGAAGGAAAGTCCCG+AGG - tig0027224:34365-34384 Msa1433070:intron 55.0%
AGAATCCTCCTCTGCTGCCT+CGG + tig0027224:34385-34404 None:intergenic 55.0%
ACTCGACTCCGGCAGATATG+TGG - tig0027224:34709-34728 Msa1433070:intron 55.0%
AGGCCATACCTCATCCGATG+TGG - tig0027224:35086-35105 Msa1433070:CDS 55.0%
TTAACACCCTCCTCGCGTCT+AGG - tig0027224:35114-35133 Msa1433070:intron 55.0%
TTCAGTCCTAGACGCGAGGA+GGG + tig0027224:35123-35142 None:intergenic 55.0%
CGAGTCACTCATCACGCTTC+AGG + tig0027224:35148-35167 None:intergenic 55.0%
GGTTTAGGAGGTGAAGGGAG+GGG + tig0027224:36295-36314 None:intergenic 55.0%
GGGTTTAGGAGGTGAAGGGA+GGG + tig0027224:36296-36315 None:intergenic 55.0%
AGGGTTTAGGAGGTGAAGGG+AGG + tig0027224:36297-36316 None:intergenic 55.0%
! TGAGACACATTCGCCGGTTG+CGG - tig0027224:37252-37271 Msa1433070:intron 55.0%
CATGGATGAGTGCAGGTCCT+CGG - tig0027224:37414-37433 Msa1433070:intron 55.0%
AAAGAACGAGCAGGAGGCTG+TGG - tig0027224:37508-37527 Msa1433070:intron 55.0%
ACCATCGGAGTAGCGCACAT+TGG - tig0027224:37598-37617 Msa1433070:intron 55.0%
TAGGGTAGGGCAAGAGAAGC+TGG - tig0027224:37760-37779 Msa1433070:CDS 55.0%
GTAGGGCAAGAGAAGCTGGA+TGG - tig0027224:37764-37783 Msa1433070:CDS 55.0%
GCACTACACGGAAGCGGCAA+TGG - tig0027224:33879-33898 Msa1433070:intron 60.0%
GAATCCTCCTCTGCTGCCTC+GGG + tig0027224:34384-34403 None:intergenic 60.0%
GTTCAGTCCTAGACGCGAGG+AGG + tig0027224:35124-35143 None:intergenic 60.0%
GGTGTTCAGTCCTAGACGCG+AGG + tig0027224:35127-35146 None:intergenic 60.0%
TAGGAGGTGAAGGGAGGGGA+GGG + tig0027224:36291-36310 None:intergenic 60.0%
TTAGGAGGTGAAGGGAGGGG+AGG + tig0027224:36292-36311 None:intergenic 60.0%
TCTTGGGGTGATGCCTCGCA+AGG - tig0027224:36909-36928 Msa1433070:intron 60.0%
! ACATTCGCCGGTTGCGGTTC+TGG - tig0027224:37258-37277 Msa1433070:intron 60.0%
!! GCGGCCGTTGGTCTCTTTTC+AGG + tig0027224:37377-37396 None:intergenic 60.0%
GTAAGACACTGAGCGGCCGT+TGG + tig0027224:37389-37408 None:intergenic 60.0%
CGAGGACCTGCACTCATCCA+TGG + tig0027224:37416-37435 None:intergenic 60.0%
ACTGAGGGCTCAAGAGTCCG+AGG + tig0027224:37434-37453 None:intergenic 60.0%
GCCAATGTGCGCTACTCCGA+TGG + tig0027224:37602-37621 None:intergenic 60.0%
GGAAAGTCCCGAGGCAGCAG+AGG - tig0027224:34374-34393 Msa1433070:intron 65.0%
AAGTCCCGAGGCAGCAGAGG+AGG - tig0027224:34377-34396 Msa1433070:intron 65.0%
CATGGCAGAAGGCCTCTGCC+TGG + tig0027224:36149-36168 None:intergenic 65.0%
GGGGTGATGCCTCGCAAGGT+AGG - tig0027224:36913-36932 Msa1433070:intron 65.0%
GCTCTTGGCGGCCGCTATTC+CGG - tig0027224:37204-37223 Msa1433070:intron 65.0%
CTCTTGGCGGCCGCTATTCC+GGG - tig0027224:37205-37224 Msa1433070:intron 65.0%
Chromosome Type Strat End Strand Name
tig0027224 gene 32581 38058 32581 ID=Msa1433070;Name=Msa1433070
tig0027224 mRNA 32581 38058 32581 ID=Msa1433070-mRNA-1;Parent=Msa1433070;Name=Msa1433070-mRNA-1;_AED=0.04;_eAED=0.04;_QI=216|0.5|0.8|0.8|1|1|5|448|554
tig0027224 exon 32581 33438 32581 ID=Msa1433070-mRNA-1:exon:8449;Parent=Msa1433070-mRNA-1
tig0027224 exon 33709 33756 33709 ID=Msa1433070-mRNA-1:exon:8448;Parent=Msa1433070-mRNA-1
tig0027224 exon 35067 35112 35067 ID=Msa1433070-mRNA-1:exon:8447;Parent=Msa1433070-mRNA-1
tig0027224 exon 35824 36795 35824 ID=Msa1433070-mRNA-1:exon:8446;Parent=Msa1433070-mRNA-1
tig0027224 exon 37654 38058 37654 ID=Msa1433070-mRNA-1:exon:8445;Parent=Msa1433070-mRNA-1
tig0027224 five_prime_UTR 37843 38058 37843 ID=Msa1433070-mRNA-1:five_prime_utr;Parent=Msa1433070-mRNA-1
tig0027224 CDS 37654 37842 37654 ID=Msa1433070-mRNA-1:cds;Parent=Msa1433070-mRNA-1
tig0027224 CDS 35824 36795 35824 ID=Msa1433070-mRNA-1:cds;Parent=Msa1433070-mRNA-1
tig0027224 CDS 35067 35112 35067 ID=Msa1433070-mRNA-1:cds;Parent=Msa1433070-mRNA-1
tig0027224 CDS 33709 33756 33709 ID=Msa1433070-mRNA-1:cds;Parent=Msa1433070-mRNA-1
tig0027224 CDS 33029 33438 33029 ID=Msa1433070-mRNA-1:cds;Parent=Msa1433070-mRNA-1
tig0027224 three_prime_UTR 32581 33028 32581 ID=Msa1433070-mRNA-1:three_prime_utr;Parent=Msa1433070-mRNA-1
Gene Sequence

>Msa1433070

ATGGCGGAGGATCGCAAAGATGCGAGTGATTACAGTTCGGAAGATGAAGGAACTGAGGATTACAAACGAGGTGGTTATCATGCGGTTCAGATTGGTGACACTTTCAAAAATGGGTGCTATGTTGTTCAGAGTAAGCTTGGCTGGGGTCATTTTTCAACTGTTTGGCTCGCTTGGGATACTCTCAAATTGCGATATGTTGCCTTAAAAATTCAGAAAAGTGCTCAGCACTACACGGAAGCGGCAATGGATGAAATAAAGATTCTCAAACAAATTGCTGAAGGGGATCTAGAGGATAAGAAATGTGTTGTGAAGCTTTTGGACCACTTTAAGCATTCAGGGCCTAATGGTCAGCATGTTTGTATGGTTTTTGAATTCCTTGGGGACAATCTTCTTACACTTATCAAGTATAGTGATTATCGTGGTATTCCCCTTCCCATGGTCAAAGAAATTTGCTACCATGTTTTGGTGGGTTTGGATTATTTGCATCGTGAGCTTTCTATAATACACACTGATTTGAAGCCAGAAAATGTTTTGCTTGTCTCTCCAATAGATCCATCTAAAGATCCTAGAAAATCAGGAGTCCCACTTATACTTCCAACCACTAAAGTCAAGACTGTATCCAAGAACGGGACCACAAAACATGATAAAAGTTCGAATGGAGATTTAACCAAGAACCAGAAAAAGAAGATGCGGAAAAAGGCTAAAAAAGCAGCTCAGAAGGAAAGTCCCGAGGCAGCAGAGGAGGATTCTGAAGCACCTGAACAAGATGATTGTAGTAATGATGTGAAACCAATTGTAGAAAATGGTGAAGGTAAACCTAATAGTCCCACAAGTAAAGATGAATCAGCAATGACTTCTGAAACTAAGGATGTTCCACAAGGAAGTCAGGTTTCTAGGAGAGGTAGTTGCTCTACGAGAAAGAAGTTGCTCGCAGCTGCTGATCTTAAGTGCAAGCTTGTGGATTTTGGAAATGCTTGTTGGACGTATAAACAATTTACAAATGATATCCAGACTAGGCAGTATAGATGTCCTGAGGTTCTTCTAGGTTCTAAATACTCGACTCCGGCAGATATGTGGTCCTTTGCTTGCATATGCTTTGAGCTTGCCACTGGCGATGTTCTTTTTGATCCTCACAGTGGTGAAAACTATGACAGGGATGAGAAACCTAGCGGAAGTGTTGCCAATCAGAAATTGTCTTGTGTTAATGGATCATCTGGCATTGATGATGGAGCTTCTTGGGGTGATGCCTCGCAAGATTGCTCTTGGCGGCCGCTATTCCGGGACTTTTTCAATAGATCTGGTGATTTGAGACACATTCGCCGGTTGCGGTTCTGGCCTATTACTAAGGTTTTGACGGAGAAGTATGATTTCAGTGCGCAAGATGCAAGTGACATGTCTGACTTCCTTGTTCCGTTACTTGACTTTGTTCCTGAAAAGAGACCAACGGCCGCTCAGTGTCTTACTCATCCATGGATGAGTGCAGGTCCTCGGACTCTTGAGCCCTCAGTGAATAGCATCCATGCTGATGCTATTAACGGAGAAAAGCCTGGAAAGTTAAGGGAAAAGAACGAGCAGGAGGCTGTGGAAGTTAGTATGGGGAATATGACCATTGATGGATCTCCAAAGACACTCAAAGATTTCCAATCTACAAAACCATCGGAGTAG
Protein sequence

>Msa1433070

MAEDRKDASDYSSEDEGTEDYKRGGYHAVQIGDTFKNGCYVVQSKLGWGHFSTVWLAWDTLKLRYVALKIQKSAQHYTEAAMDEIKILKQIAEGDLEDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGIPLPMVKEICYHVLVGLDYLHRELSIIHTDLKPENVLLVSPIDPSKDPRKSGVPLILPTTKVKTVSKNGTTKHDKSSNGDLTKNQKKKMRKKAKKAAQKESPEAAEEDSEAPEQDDCSNDVKPIVENGEGKPNSPTSKDESAMTSETKDVPQGSQVSRRGSCSTRKKLLAAADLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADMWSFACICFELATGDVLFDPHSGENYDRDEKPSGSVANQKLSCVNGSSGIDDGASWGDASQDCSWRPLFRDFFNRSGDLRHIRRLRFWPITKVLTEKYDFSAQDASDMSDFLVPLLDFVPEKRPTAAQCLTHPWMSAGPRTLEPSVNSIHADAINGEKPGKLREKNEQEAVEVSMGNMTIDGSPKTLKDFQSTKPSE*