AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1434080


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1434080 MtrunA17_Chr4g0051121 64.048 331 56 4 140 407 29 359 3.92e-128 384
Msa1434080 MtrunA17_Chr1g0201721 57.101 338 68 7 140 407 29 359 3.52e-112 343
Msa1434080 MtrunA17_Chr2g0287651 63.971 136 38 2 405 531 106 239 1.47e-48 183
Msa1434080 MtrunA17_Chr2g0287651 59.091 66 27 0 514 579 493 558 9.35e-18 87.8
Msa1434080 MtrunA17_Chr1g0203051 31.429 140 85 2 404 534 109 246 1.50e-17 87.0
Msa1434080 MtrunA17_Chr6g0479721 48.246 114 45 4 1 113 1 101 3.69e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1434080 AT1G61580.1 58.075 322 74 5 140 402 29 348 1.57e-112 344
Msa1434080 AT1G43170.1 51.374 364 117 5 140 446 29 389 5.41e-108 333
Msa1434080 AT1G43170.6 51.374 364 117 5 140 446 29 389 5.41e-108 333
Msa1434080 AT1G43170.2 51.374 364 117 5 140 446 29 389 5.41e-108 333
Msa1434080 AT1G43170.3 51.374 364 117 5 140 446 29 389 5.41e-108 333
Msa1434080 AT1G43170.9 51.374 364 117 5 140 446 29 389 5.41e-108 333
Msa1434080 AT1G43170.8 51.374 364 117 5 140 446 29 389 5.41e-108 333
Msa1434080 AT1G43170.7 51.374 364 117 5 140 446 29 389 5.41e-108 333
Msa1434080 AT1G43170.5 51.374 364 117 5 140 446 29 389 5.41e-108 333
Msa1434080 AT1G43170.4 56.738 282 88 7 189 446 35 306 3.01e-93 291

Find 161 sgRNAs with CRISPR-Local

Find 480 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAATGCCTTTACTGATTT+TGG 0.059598 tig0027465:-15148 Msa1434080:CDS
ATCCTTCTCCCACGTCTTTC+TGG 0.095830 tig0027465:+8875 None:intergenic
ATCCTGCTCCCACGTCTTTC+TGG 0.117062 tig0027465:+8773 None:intergenic
AATAAGAACTTGTCATATAA+TGG 0.247315 tig0027465:-10625 Msa1434080:CDS
TGCATTTACACCCTGTTTAT+CGG 0.264525 tig0027465:-10698 Msa1434080:CDS
TGTTCACTACAGACCCAAAA+AGG 0.266221 tig0027465:-10784 Msa1434080:CDS
AAAAGCCTTCTTCTTTGATT+TGG 0.275291 tig0027465:+12693 None:intergenic
GGTTTGGTAGGATCGTCTTT+TGG 0.278169 tig0027465:+13052 None:intergenic
TCTCCACCTCCCTAACTATA+TGG 0.297973 tig0027465:+12987 None:intergenic
AGTGATGATGGTGGTTGTTC+TGG 0.317361 tig0027465:-14920 Msa1434080:CDS
CTGGGATGACCCATATAGTT+AGG 0.327433 tig0027465:-12997 Msa1434080:CDS
AGAGTGACAACCCGCTTCTT+TGG 0.327880 tig0027465:+11575 None:intergenic
CTGTTAGGAAGAGTGATATT+AGG 0.340554 tig0027465:-10947 Msa1434080:intron
CTTAGGAAGGTTGCTTGTAT+TGG 0.348287 tig0027465:-11969 Msa1434080:CDS
CATTGGTTGGAGTAGGTTCA+TGG 0.364482 tig0027465:+10724 None:intergenic
GTGTTTCTTTCACAGTTGCC+AGG 0.383039 tig0027465:-11929 Msa1434080:CDS
ATGGGTGGATTCCCTCATTA+TGG 0.389175 tig0027465:-11644 Msa1434080:CDS
ACAAAAGAAAGCTCATTTGA+TGG 0.389254 tig0027465:-12189 Msa1434080:CDS
GAAAGACTCACAGAGGTCTT+AGG 0.395521 tig0027465:-11986 Msa1434080:CDS
ATAAGAACTTGTCATATAAT+GGG 0.403187 tig0027465:-10624 Msa1434080:CDS
GGTACACCGGAACATGATTA+CGG 0.407134 tig0027465:-15127 Msa1434080:CDS
TGTATGCATAGTCCACCTTC+TGG 0.407194 tig0027465:+12138 None:intergenic
AGCATTTATCAAGGTTAGAT+AGG 0.409294 tig0027465:-10857 Msa1434080:CDS
TCTTTCACAGTTGCCAGGGC+TGG 0.417530 tig0027465:-11924 Msa1434080:CDS
GATTATAGTGCTGGTGATAA+AGG 0.421954 tig0027465:-14896 Msa1434080:CDS
TCTTGTTCTTGCTCATACTC+AGG 0.426916 tig0027465:-12581 Msa1434080:intron
AGCTCATTTGATGGAAATCC+AGG 0.429460 tig0027465:-12180 Msa1434080:CDS
TGAAGGTGTTGTAACTCGTT+GGG 0.432396 tig0027465:-12027 Msa1434080:CDS
GATGAGCGATATGAAGAAAC+TGG 0.434304 tig0027465:-14953 Msa1434080:CDS
CTTGGTAAAAGCCTTCTACT+TGG 0.445741 tig0027465:+12737 None:intergenic
TGGCTAGCATGCTGAGACAT+GGG 0.445822 tig0027465:+8691 None:intergenic
CGAGGCTGCTGAAATCTATA+CGG 0.448201 tig0027465:-9665 Msa1434080:CDS
GATATTAGGCGCAATGTTAA+CGG 0.449906 tig0027465:-10933 Msa1434080:CDS
TCTACCATACCTGTCAAATT+CGG 0.452800 tig0027465:+11815 None:intergenic
TAGCTAGCATGCTGAGACAT+GGG 0.456278 tig0027465:+8589 None:intergenic
ATGAAGGTGTTGTAACTCGT+TGG 0.463306 tig0027465:-12028 Msa1434080:CDS
AGGAGTCAACCTGCATGGTT+TGG 0.464402 tig0027465:+13036 None:intergenic
GGGATACATGGTGGCTCAGA+AGG 0.464555 tig0027465:-10604 Msa1434080:CDS
TGGCTAGCATGCTGAGACAT+GGG 0.464703 tig0027465:+8793 None:intergenic
TAGTGAACACGGAGCCTAGC+TGG 0.466097 tig0027465:+10798 None:intergenic
TCATGATTATCTTATGATCA+AGG 0.469123 tig0027465:-11612 Msa1434080:CDS
GAAACATATCCGATCATTGT+TGG 0.469215 tig0027465:-15079 Msa1434080:CDS
GATCTACAAGGTTGGCAAGC+AGG 0.471641 tig0027465:-11862 Msa1434080:CDS
GAGATAAGAAGCATTTATCA+AGG 0.475640 tig0027465:-10866 Msa1434080:CDS
AGACGTGGGAGCAGGATCAA+AGG 0.477291 tig0027465:-8767 Msa1434080:CDS
GTAGATAAAGCACAGATTGA+TGG 0.478198 tig0027465:-10663 Msa1434080:CDS
TGATTACGGTTCTACGGATG+TGG 0.481654 tig0027465:-15113 Msa1434080:CDS
CAGCACAGGGGATGAAAACC+TGG 0.488423 tig0027465:+9714 None:intergenic
CTGGCTAGCATGCTGAGACA+TGG 0.489602 tig0027465:+8792 None:intergenic
AGACCTCTGTGAGTCTTTCG+TGG 0.489617 tig0027465:+11990 None:intergenic
TGTTCTGGTGATTATAGTGC+TGG 0.489646 tig0027465:-14905 Msa1434080:CDS
CGCAGATGAGTTGTCAGCAC+AGG 0.491267 tig0027465:+9700 None:intergenic
AAACATATCCGATCATTGTT+GGG 0.491804 tig0027465:-15078 Msa1434080:CDS
CTCCACCTCCCTAACTATAT+GGG 0.492400 tig0027465:+12988 None:intergenic
GTAGAACCGTAATCATGTTC+CGG 0.492886 tig0027465:+15121 None:intergenic
TTGGCTAGCATGCTGAGACA+TGG 0.494151 tig0027465:+8690 None:intergenic
ATGATCAAGGGAGGCTGTGT+TGG 0.494294 tig0027465:-11599 Msa1434080:CDS
AGACGTGGGAGAAGGATCAA+AGG 0.494945 tig0027465:-8869 Msa1434080:CDS
AGTTCTTGTAAAAGCCTACT+TGG 0.497703 tig0027465:+12719 None:intergenic
ACTGAAGGTAAGGAAGTTGA+AGG 0.498152 tig0027465:-12219 Msa1434080:intron
TGATGGCTGTATGTGACTCT+TGG 0.498553 tig0027465:+11838 None:intergenic
CTCTGTGAGTCTTTCGTGGA+AGG 0.499855 tig0027465:+11994 None:intergenic
GCAGTATGTATGCAACAAGC+AGG 0.502107 tig0027465:-10895 Msa1434080:CDS
TTACTGTTCCACCATTCACC+TGG 0.504547 tig0027465:+12162 None:intergenic
GAAGATGATGATGTAGTTGT+TGG 0.505754 tig0027465:-14731 Msa1434080:intron
ACTAAAGGTAAAGGTTATGA+AGG 0.505989 tig0027465:-12044 Msa1434080:intron
ACATCACACTTACTTGAACT+AGG 0.506150 tig0027465:+12962 None:intergenic
GACGTGGGAGCAGGATCAAA+GGG 0.507704 tig0027465:-8766 Msa1434080:CDS
AGCCAGAAAGACGTGGGAGC+AGG 0.508124 tig0027465:-8775 Msa1434080:CDS
GTTGCCAGGGCTGGTCAGAA+TGG 0.509746 tig0027465:-11915 Msa1434080:CDS
GCTCAGAAGGGTGGATATCC+CGG 0.515458 tig0027465:-10591 Msa1434080:CDS
CCAGACTTGTAACCCACAAA+AGG 0.520483 tig0027465:+13016 None:intergenic
GACGTGGGAGGAGGATCAAA+GGG 0.523575 tig0027465:-8664 Msa1434080:CDS
ATATCCATTCTGACCAGCCC+TGG 0.525294 tig0027465:+11911 None:intergenic
CCGATCATTGTTGGGAGTGG+TGG 0.525336 tig0027465:-15070 Msa1434080:CDS
CGGTGTACCAAAATCAGTAA+AGG 0.530148 tig0027465:+15141 None:intergenic
TGGGATGACCCATATAGTTA+GGG 0.533545 tig0027465:-12996 Msa1434080:CDS
CAGCCATCACCGAATTTGAC+AGG 0.540792 tig0027465:-11824 Msa1434080:intron
CCACCACTCCCAACAATGAT+CGG 0.545431 tig0027465:+15070 None:intergenic
GTGAAAGAAGAAATTATGAA+AGG 0.548916 tig0027465:-9625 Msa1434080:CDS
AGACGTGGGAGGAGGATCAA+AGG 0.549459 tig0027465:-8665 Msa1434080:CDS
TGAGAAGGATATTACTCCGA+TGG 0.550874 tig0027465:-11663 Msa1434080:CDS
TGTTTCTTTCACAGTTGCCA+GGG 0.552169 tig0027465:-11928 Msa1434080:CDS
GGAACATGATTACGGTTCTA+CGG 0.552732 tig0027465:-15119 Msa1434080:CDS
TTAGCTAGCATGCTGAGACA+TGG 0.553987 tig0027465:+8588 None:intergenic
TTGTCATATAATGGGATACA+TGG 0.555297 tig0027465:-10616 Msa1434080:CDS
TGATTCACCACACCATAATG+AGG 0.560682 tig0027465:+11632 None:intergenic
GACGTGGGAGAAGGATCAAA+GGG 0.564696 tig0027465:-8868 Msa1434080:CDS
GACCCATATAGTTAGGGAGG+TGG 0.564750 tig0027465:-12990 Msa1434080:CDS
TGTAAATGCACAGCATTGGT+TGG 0.565762 tig0027465:+10711 None:intergenic
CTGGGCCAAATCAAAGAAGA+AGG 0.566302 tig0027465:-12698 Msa1434080:CDS
AGCCAGAAAGACGTGGGAGA+AGG 0.570261 tig0027465:-8877 Msa1434080:CDS
AATAAGAAGATCTACAAGGT+TGG 0.571689 tig0027465:-11870 Msa1434080:CDS
TACATGGTGGCTCAGAAGGG+TGG 0.573659 tig0027465:-10600 Msa1434080:CDS
TATCCGATCATTGTTGGGAG+TGG 0.573961 tig0027465:-15073 Msa1434080:CDS
TTTGGAAAACTGCATCCACT+GGG 0.575475 tig0027465:+12096 None:intergenic
GCAGATGAGTTGTCAGCACA+GGG 0.575960 tig0027465:+9701 None:intergenic
CTGTGTTGGACCAAAGAAGC+GGG 0.582412 tig0027465:-11585 Msa1434080:CDS
AGGGTGTAAATGCACAGCAT+TGG 0.584309 tig0027465:+10707 None:intergenic
CAGTATGTATGCAACAAGCA+GGG 0.584535 tig0027465:-10894 Msa1434080:CDS
GGTGATAAAGGTGAAGATGA+TGG 0.589452 tig0027465:-14884 Msa1434080:CDS
GCATGCTAGCCAGAAAGACG+TGG 0.591586 tig0027465:-8782 Msa1434080:CDS
GCATGCTAGCCAGAAAGACG+TGG 0.591586 tig0027465:-8884 Msa1434080:CDS
ATACCTGTCAAATTCGGTGA+TGG 0.592064 tig0027465:+11821 None:intergenic
CATGATTATCTTATGATCAA+GGG 0.593532 tig0027465:-11611 Msa1434080:CDS
ACTGTGAAAGAAACACGGGC+AGG 0.602337 tig0027465:+11936 None:intergenic
AGCAAGAACAAGAATAACAA+TGG 0.604954 tig0027465:+12591 None:intergenic
TGCTAACTGCAGGACTGAGA+AGG 0.605725 tig0027465:-11678 Msa1434080:intron
GTCAACCTGCATGGTTTGGT+AGG 0.607401 tig0027465:+13040 None:intergenic
GGAGACAATGAAAGTGATGA+TGG 0.609236 tig0027465:-14932 Msa1434080:CDS
GGATACATGGTGGCTCAGAA+GGG 0.612576 tig0027465:-10603 Msa1434080:CDS
AATCTGTGCTTTATCTACCT+CGG 0.613894 tig0027465:+10668 None:intergenic
AGTGAAGGTCATGGTAGTGA+AGG 0.614950 tig0027465:-14770 Msa1434080:CDS
AAGGATATTACTCCGATGGG+TGG 0.616580 tig0027465:-11659 Msa1434080:CDS
ACGATCCTACCAAACCATGC+AGG 0.616668 tig0027465:-13045 Msa1434080:CDS
TCTGCGTTGTCTTGAACGCG+AGG 0.617404 tig0027465:-9683 Msa1434080:CDS
GATGAAAGTCAAGGTGATGA+AGG 0.618015 tig0027465:-14851 Msa1434080:CDS
CTGAAGGTAAGGAAGTTGAA+GGG 0.618478 tig0027465:-12218 Msa1434080:intron
TTGATGGAAATCCAGGTGAA+TGG 0.624401 tig0027465:-12173 Msa1434080:CDS
GAAGGTGTTGTAACTCGTTG+GGG 0.631562 tig0027465:-12026 Msa1434080:CDS
GATTCACCACACCATAATGA+GGG 0.633956 tig0027465:+11633 None:intergenic
AGTATGTATGCAACAAGCAG+GGG 0.634341 tig0027465:-10893 Msa1434080:CDS
GAGAAGGATATTACTCCGAT+GGG 0.634704 tig0027465:-11662 Msa1434080:CDS
ACAAAAGGAGTCAACCTGCA+TGG 0.637584 tig0027465:+13031 None:intergenic
TGCACAGCATTGGTTGGAGT+AGG 0.638605 tig0027465:+10717 None:intergenic
CTCGTACAAAGTGTCCAGCT+AGG 0.644688 tig0027465:-10812 Msa1434080:CDS
ATGGAAATCCAGGTGAATGG+TGG 0.650056 tig0027465:-12170 Msa1434080:CDS
TGGAACAGTAAGCCAGAAGG+TGG 0.655815 tig0027465:-12150 Msa1434080:CDS
GGCAACTGTGAAAGAAACAC+GGG 0.658795 tig0027465:+11932 None:intergenic
GCTGTGTTGGACCAAAGAAG+CGG 0.659280 tig0027465:-11586 Msa1434080:CDS
GACTCACAGAGGTCTTAGGA+AGG 0.659357 tig0027465:-11982 Msa1434080:CDS
CTGTGAAAGAAACACGGGCA+GGG 0.660981 tig0027465:+11937 None:intergenic
TGGCAACTGTGAAAGAAACA+CGG 0.665100 tig0027465:+11931 None:intergenic
TGGATTCCCTCATTATGGTG+TGG 0.666509 tig0027465:-11639 Msa1434080:CDS
GGTGATGAAAGTGAAGGTCA+TGG 0.667300 tig0027465:-14779 Msa1434080:CDS
GATTATCTTATGATCAAGGG+AGG 0.667777 tig0027465:-11608 Msa1434080:CDS
TCATATAATGGGATACATGG+TGG 0.669224 tig0027465:-10613 Msa1434080:CDS
TGGTGGAACAGTAAGCCAGA+AGG 0.669829 tig0027465:-12153 Msa1434080:CDS
GATGACCCATATAGTTAGGG+AGG 0.674070 tig0027465:-12993 Msa1434080:CDS
GCGGAATAAGAAGATCTACA+AGG 0.677047 tig0027465:-11874 Msa1434080:CDS
GATGATGATGATGTGAGTCA+TGG 0.679569 tig0027465:-15010 Msa1434080:intron
TTAACGGTGAGATTGTAATG+AGG 0.680367 tig0027465:-10917 Msa1434080:CDS
TAATGAGGGAATCCACCCAT+CGG 0.681222 tig0027465:+11647 None:intergenic
GATATCATCATCGTATCGAG+CGG 0.685394 tig0027465:-11893 Msa1434080:CDS
AGGTGTTGCACTGAGTGTGA+AGG 0.686205 tig0027465:-9605 Msa1434080:CDS
CATGCTAGCCAGAAAGACGT+GGG 0.690224 tig0027465:-8781 Msa1434080:CDS
AGTCAAGGTGATGAAGGTGA+AGG 0.696692 tig0027465:-14845 Msa1434080:CDS
CATGCTAGCCAGAAAGACGT+GGG 0.697336 tig0027465:-8883 Msa1434080:CDS
CTTCGAAAAGCAAATCCCAG+TGG 0.698185 tig0027465:-12111 Msa1434080:CDS
AGTGAAGGTCATGCTAGTGA+AGG 0.698593 tig0027465:-14815 Msa1434080:CDS
TGTTTATCGGAAAATATCCG+AGG 0.704996 tig0027465:-10685 Msa1434080:CDS
GACAATGAAAGTGATGATGG+TGG 0.706532 tig0027465:-14929 Msa1434080:CDS
ATTGATGGTCTTCAGTCACA+CGG 0.708259 tig0027465:-10648 Msa1434080:CDS
GTGGGAGGAGGATCAAAGGG+AGG 0.710691 tig0027465:-8661 Msa1434080:CDS
GTGGGAGCAGGATCAAAGGG+AGG 0.712846 tig0027465:-8763 Msa1434080:CDS
AGTGAAGGTGATGAAAGTGA+AGG 0.717258 tig0027465:-14785 Msa1434080:CDS
AGTGAAGGTGATGAAAGTGA+AGG 0.731903 tig0027465:-14800 Msa1434080:CDS
GGTGAAGGTGATGAAAGTGA+AGG 0.739796 tig0027465:-14830 Msa1434080:CDS
AGTGAATGCGATGAAAGTCA+AGG 0.740679 tig0027465:-14860 Msa1434080:CDS
CTTCCACGAAAGACTCACAG+AGG 0.747305 tig0027465:-11993 Msa1434080:CDS
CAGATGAGTTGTCAGCACAG+GGG 0.773409 tig0027465:+9702 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATCTTTGAATTTAAAT+CGG + tig0027465:12499-12518 None:intergenic 10.0%
!!! TTAAATTAAAAGATTTTAGA+TGG - tig0027465:12556-12575 Msa1434080:intron 10.0%
!!! TAAATTAAAAGATTTTAGAT+GGG - tig0027465:12557-12576 Msa1434080:intron 10.0%
!!! TAAATTAAACGATTTTAAAT+CGG - tig0027465:12591-12610 Msa1434080:CDS 10.0%
!! TTAAATCAGAGAAATTAAAT+AGG - tig0027465:9112-9131 Msa1434080:intron 15.0%
!!! AACTACAATAACTTTTAAAT+AGG - tig0027465:9180-9199 Msa1434080:intron 15.0%
!!! AGTGTTTTTTGTTTTATTTT+TGG + tig0027465:9246-9265 None:intergenic 15.0%
!! CACTAATAAACAATTTAAAA+AGG + tig0027465:11252-11271 None:intergenic 15.0%
!!! TTTTAAATTGTTTATTAGTG+AGG - tig0027465:11252-11271 Msa1434080:intron 15.0%
!! TATATTTATTCTCTTAAATG+TGG - tig0027465:11363-11382 Msa1434080:intron 15.0%
!! TAATTTATTCTGTTTAAATG+TGG - tig0027465:11438-11457 Msa1434080:intron 15.0%
!!! ATTTTTTTTATACACGATTA+CGG + tig0027465:12445-12464 None:intergenic 15.0%
!! AAATATAGAGAGAATTTAAA+TGG - tig0027465:12467-12486 Msa1434080:intron 15.0%
!! AATATAGAGAGAATTTAAAT+GGG - tig0027465:12468-12487 Msa1434080:intron 15.0%
!!! AAATTAAACGATTTTAAATC+GGG - tig0027465:12592-12611 Msa1434080:CDS 15.0%
!!! ATCAAATACACTTTTTAAAT+CGG - tig0027465:12634-12653 Msa1434080:CDS 15.0%
!!! TACGATTTTTATTATAAGTA+CGG - tig0027465:12761-12780 Msa1434080:intron 15.0%
!!! ATCTTTTTTCTTTTTAAGTC+AGG + tig0027465:9210-9229 None:intergenic 20.0%
!!! TTAACTGTTACTTAAATGTT+TGG - tig0027465:9825-9844 Msa1434080:intron 20.0%
!!! TCTAAGTTTGATTCAATTTT+AGG - tig0027465:9968-9987 Msa1434080:intron 20.0%
!! GTTTATTGTGATATACAAAT+CGG - tig0027465:10123-10142 Msa1434080:intron 20.0%
!!! ATATTATACGAACTTTGTTT+TGG - tig0027465:10161-10180 Msa1434080:intron 20.0%
!!! ACTGATTTGTATTTCAAAAT+TGG + tig0027465:10470-10489 None:intergenic 20.0%
!! TATGAAGTTCTACAATATAA+AGG + tig0027465:10907-10926 None:intergenic 20.0%
!!! TTCATATTTTTTGGTATACT+TGG + tig0027465:11082-11101 None:intergenic 20.0%
!!! TTCATCAGTTTCATATTTTT+TGG + tig0027465:11091-11110 None:intergenic 20.0%
!! AAAAAATATGAAACTGATGA+AGG - tig0027465:11090-11109 Msa1434080:intron 20.0%
!!! AAGACCAATAATAACATTTT+TGG + tig0027465:11195-11214 None:intergenic 20.0%
!! ATCCAAGATAAAAACTTAAT+TGG + tig0027465:11971-11990 None:intergenic 20.0%
!!! TTTTTATCTTGGATAATCTT+AGG - tig0027465:11977-11996 Msa1434080:CDS 20.0%
!! AAATATCATATGATCAATGA+AGG + tig0027465:12406-12425 None:intergenic 20.0%
!! ATATAGAGAGAATTTAAATG+GGG - tig0027465:12469-12488 Msa1434080:intron 20.0%
!!! TGAATATGACTTTTTAAATC+GGG + tig0027465:12682-12701 None:intergenic 20.0%
!!! GTGAATATGACTTTTTAAAT+CGG + tig0027465:12683-12702 None:intergenic 20.0%
!!! CAGAAAATACTTTTTAAATC+AGG + tig0027465:12705-12724 None:intergenic 20.0%
!! AATAAGAACTTGTCATATAA+TGG - tig0027465:13123-13142 Msa1434080:intron 20.0%
!! ATAAGAACTTGTCATATAAT+GGG - tig0027465:13124-13143 Msa1434080:intron 20.0%
!! AAATCATAAAGAGTTATGTT+AGG - tig0027465:13923-13942 Msa1434080:intron 20.0%
!! CTTCAACACAAAAAAAATAT+GGG + tig0027465:14305-14324 None:intergenic 20.0%
! AATTATACGAAGAATACTCA+AGG - tig0027465:8762-8781 Msa1434080:CDS 25.0%
! ATTATACGAAGAATACTCAA+GGG - tig0027465:8763-8782 Msa1434080:CDS 25.0%
! ATAAATTCATTAACTGCTGA+AGG - tig0027465:9056-9075 Msa1434080:intron 25.0%
! TGTAGTTAAAACCTTATTAC+CGG + tig0027465:9167-9186 None:intergenic 25.0%
!!! TTTTTCTTTTTAAGTCAGGT+GGG + tig0027465:9206-9225 None:intergenic 25.0%
!!! TTTTTTCTTTTTAAGTCAGG+TGG + tig0027465:9207-9226 None:intergenic 25.0%
! AATGTTTGGAAAATTTGTGA+AGG - tig0027465:9839-9858 Msa1434080:intron 25.0%
!! ACTAATTTGTATCTCAAAGT+TGG + tig0027465:10295-10314 None:intergenic 25.0%
!!! GTGTTGATAATTTGAATATG+AGG - tig0027465:10325-10344 Msa1434080:intron 25.0%
!! CAAATTAGATAAAGTGTTCA+GGG + tig0027465:10656-10675 None:intergenic 25.0%
! ATGATTAACATGTGATTGTT+GGG - tig0027465:10823-10842 Msa1434080:CDS 25.0%
! TGGTTCATTATATATGTTCT+TGG - tig0027465:10861-10880 Msa1434080:CDS 25.0%
! GGTACCAAAAATGTTATTAT+TGG - tig0027465:11188-11207 Msa1434080:intron 25.0%
! GAGAATAAATATAACACGAA+AGG + tig0027465:11356-11375 None:intergenic 25.0%
! AACTACTGTTAATGTTGTAA+CGG - tig0027465:11488-11507 Msa1434080:intron 25.0%
!! TGTATTTCTTTGTTTACTGA+AGG - tig0027465:11514-11533 Msa1434080:intron 25.0%
!! TATCAATCATCTCATCTTTT+TGG + tig0027465:11673-11692 None:intergenic 25.0%
!! TGCCAATTAAGTTTTTATCT+TGG - tig0027465:11966-11985 Msa1434080:CDS 25.0%
! TCATGATTATCTTATGATCA+AGG - tig0027465:12136-12155 Msa1434080:CDS 25.0%
! CATGATTATCTTATGATCAA+GGG - tig0027465:12137-12156 Msa1434080:CDS 25.0%
! ATAAGCTATTAACATGACAT+GGG + tig0027465:12248-12267 None:intergenic 25.0%
! AATAAGCTATTAACATGACA+TGG + tig0027465:12249-12268 None:intergenic 25.0%
!!! TCTTGTTAGCCTTTTTTAAA+TGG - tig0027465:12522-12541 Msa1434080:intron 25.0%
! CTTAACATTCAGATAGTTTA+GGG + tig0027465:13266-13285 None:intergenic 25.0%
! ACTTAACATTCAGATAGTTT+AGG + tig0027465:13267-13286 None:intergenic 25.0%
! AGAATATTCACAAAAGGAAT+GGG + tig0027465:13302-13321 None:intergenic 25.0%
!!! AACGTTTGAAATGTCTATTT+TGG - tig0027465:13335-13354 Msa1434080:intron 25.0%
!!! ACGTTTGAAATGTCTATTTT+GGG - tig0027465:13336-13355 Msa1434080:intron 25.0%
! AAACAATAGACACTTATATG+TGG - tig0027465:13518-13537 Msa1434080:intron 25.0%
! AACAATAGACACTTATATGT+GGG - tig0027465:13519-13538 Msa1434080:intron 25.0%
!! AGCAATGTACTCTAATTTTA+CGG - tig0027465:13732-13751 Msa1434080:intron 25.0%
!! TTCTTTGTTCTCATATGTTT+TGG + tig0027465:13827-13846 None:intergenic 25.0%
! ATATGAGAACAAAGAATTGT+GGG - tig0027465:13831-13850 Msa1434080:intron 25.0%
! GTGAAAGAAGAAATTATGAA+AGG - tig0027465:14123-14142 Msa1434080:intron 25.0%
! CCTTCAACACAAAAAAAATA+TGG + tig0027465:14306-14325 None:intergenic 25.0%
!!! CCATATTTTTTTTGTGTTGA+AGG - tig0027465:14303-14322 Msa1434080:intron 25.0%
!! ATGTGTTTACAAATTTTTGC+AGG - tig0027465:14467-14486 Msa1434080:intron 25.0%
!! TGTGTTTACAAATTTTTGCA+GGG - tig0027465:14468-14487 Msa1434080:intron 25.0%
!! GAACATTTTCTTACAAACTT+TGG + tig0027465:14667-14686 None:intergenic 25.0%
!!! AACAATGCCTTTACTGATTT+TGG - tig0027465:8600-8619 Msa1434080:CDS 30.0%
AAACATATCCGATCATTGTT+GGG - tig0027465:8670-8689 Msa1434080:CDS 30.0%
!! GGTTATGTTTTTAAATCTGG+TGG + tig0027465:9145-9164 None:intergenic 30.0%
CCAGATTTAAAAACATAACC+CGG - tig0027465:9145-9164 Msa1434080:intron 30.0%
AAAAACATAACCCGGTAATA+AGG - tig0027465:9153-9172 Msa1434080:intron 30.0%
GTAGTTAAAACCTTATTACC+GGG + tig0027465:9166-9185 None:intergenic 30.0%
ATCACACATGATGAGAATAT+GGG + tig0027465:9380-9399 None:intergenic 30.0%
AATCACACATGATGAGAATA+TGG + tig0027465:9381-9400 None:intergenic 30.0%
TCTCAATTATACGCAATTCA+TGG - tig0027465:9417-9436 Msa1434080:intron 30.0%
ATTCATGGATTTCCAAATCT+AGG - tig0027465:9432-9451 Msa1434080:intron 30.0%
TTCATGGATTTCCAAATCTA+GGG - tig0027465:9433-9452 Msa1434080:intron 30.0%
AATTTACTCTTTGACGATGA+CGG + tig0027465:9507-9526 None:intergenic 30.0%
AATCAGATAAGAGGATGAAA+AGG + tig0027465:9531-9550 None:intergenic 30.0%
TAGTTTCTGTTGTGGATTTA+GGG - tig0027465:9584-9603 Msa1434080:intron 30.0%
TGACAATGTGAAGTTCAAAT+TGG + tig0027465:9994-10013 None:intergenic 30.0%
CATATAAGCTAGTGATTGTT+CGG + tig0027465:10205-10224 None:intergenic 30.0%
AATGTGATTAACTTTGTCTG+TGG - tig0027465:10439-10458 Msa1434080:intron 30.0%
AATGTGATTTACTTTGTCTG+TGG - tig0027465:10534-10553 Msa1434080:intron 30.0%
AAAAATAGGCATAGGATAAC+AGG + tig0027465:10568-10587 None:intergenic 30.0%
ATAGGTGTAAAAATAGGCAT+AGG + tig0027465:10576-10595 None:intergenic 30.0%
AGGTGAATAGGTGTAAAAAT+AGG + tig0027465:10582-10601 None:intergenic 30.0%
AGGTGATATATTAGGTGAAT+AGG + tig0027465:10594-10613 None:intergenic 30.0%
ATGCTACTAGGTGATATATT+AGG + tig0027465:10602-10621 None:intergenic 30.0%
TAATATATCACCTAGTAGCA+TGG - tig0027465:10601-10620 Msa1434080:CDS 30.0%
! GCAAATTAGATAAAGTGTTC+AGG + tig0027465:10657-10676 None:intergenic 30.0%
! TTCAAGTAAGTGTGATGTTT+TGG - tig0027465:10791-10810 Msa1434080:CDS 30.0%
CATGATTAACATGTGATTGT+TGG - tig0027465:10822-10841 Msa1434080:CDS 30.0%
!!! TTGGGTTGGTTATTTTTTCA+TGG - tig0027465:10841-10860 Msa1434080:CDS 30.0%
AAAAGCCTTCTTCTTTGATT+TGG + tig0027465:11058-11077 None:intergenic 30.0%
AGCAAGAACAAGAATAACAA+TGG + tig0027465:11160-11179 None:intergenic 30.0%
TTTATTAGTGAGGCATATCT+GGG - tig0027465:11262-11281 Msa1434080:intron 30.0%
! TTCTTTGTTTACTGAAGGTA+AGG - tig0027465:11519-11538 Msa1434080:intron 30.0%
ACAAAAGAAAGCTCATTTGA+TGG - tig0027465:11559-11578 Msa1434080:CDS 30.0%
GATGAGATGATTGATATCAT+TGG - tig0027465:11677-11696 Msa1434080:intron 30.0%
GATATCATTGGAGTAACTAA+AGG - tig0027465:11689-11708 Msa1434080:intron 30.0%
ATTGGAGTAACTAAAGGTAA+AGG - tig0027465:11695-11714 Msa1434080:intron 30.0%
ACTAAAGGTAAAGGTTATGA+AGG - tig0027465:11704-11723 Msa1434080:intron 30.0%
AATAAGAAGATCTACAAGGT+TGG - tig0027465:11878-11897 Msa1434080:CDS 30.0%
! CGGTTGATACCATTTAAAAA+AGG + tig0027465:12534-12553 None:intergenic 30.0%
! AACGATTTTAAATCGGGTAA+AGG - tig0027465:12598-12617 Msa1434080:CDS 30.0%
! ACGATTTTAAATCGGGTAAA+GGG - tig0027465:12599-12618 Msa1434080:CDS 30.0%
TATAAGTACGGTAAGTGTAA+TGG - tig0027465:12773-12792 Msa1434080:intron 30.0%
!! GAGATAAGAAGCATTTATCA+AGG - tig0027465:12882-12901 Msa1434080:intron 30.0%
AGCATTTATCAAGGTTAGAT+AGG - tig0027465:12891-12910 Msa1434080:intron 30.0%
! ACAACATATCTACCCTTTTT+GGG + tig0027465:12980-12999 None:intergenic 30.0%
!!! TGTTGTGTCTATTTTTGAAG+AGG - tig0027465:12994-13013 Msa1434080:CDS 30.0%
!!! GTTGTGTCTATTTTTGAAGA+GGG - tig0027465:12995-13014 Msa1434080:CDS 30.0%
! TTGTCATATAATGGGATACA+TGG - tig0027465:13132-13151 Msa1434080:intron 30.0%
! AAAAATGCGTGCTGTTATTA+AGG - tig0027465:13222-13241 Msa1434080:intron 30.0%
GAATATTCACAAAAGGAATG+GGG + tig0027465:13301-13320 None:intergenic 30.0%
CAGAATATTCACAAAAGGAA+TGG + tig0027465:13303-13322 None:intergenic 30.0%
!! AGATCAGATTATTTCTGCTT+TGG - tig0027465:13373-13392 Msa1434080:intron 30.0%
CAAATATAACTGTTTGTGAG+TGG + tig0027465:13477-13496 None:intergenic 30.0%
CACTCACAAACAGTTATATT+TGG - tig0027465:13475-13494 Msa1434080:intron 30.0%
! ACCAGTTTTCTAGATTGTAT+GGG - tig0027465:13547-13566 Msa1434080:intron 30.0%
TTCCAAAAAAGCTGAATTCT+TGG + tig0027465:13701-13720 None:intergenic 30.0%
!!! AAGAATTCAGCTTTTTTGGA+AGG - tig0027465:13700-13719 Msa1434080:intron 30.0%
! AATGTACTCTAATTTTACGG+AGG - tig0027465:13735-13754 Msa1434080:intron 30.0%
! AGGATGAAATTGAAGAGTTT+TGG - tig0027465:13755-13774 Msa1434080:intron 30.0%
! GGATGAAATTGAAGAGTTTT+GGG - tig0027465:13756-13775 Msa1434080:intron 30.0%
! GATGAAATTGAAGAGTTTTG+GGG - tig0027465:13757-13776 Msa1434080:intron 30.0%
!! ATGAAATTGAAGAGTTTTGG+GGG - tig0027465:13758-13777 Msa1434080:intron 30.0%
CATATGAGAACAAAGAATTG+TGG - tig0027465:13830-13849 Msa1434080:intron 30.0%
AAGAGTTATGTTAGGAAGAA+AGG - tig0027465:13931-13950 Msa1434080:intron 30.0%
!! TTGTAGCTGATTTTAAATCC+AGG - tig0027465:14016-14035 Msa1434080:intron 30.0%
GAAGTTGACAAAATATCTTG+AGG - tig0027465:14197-14216 Msa1434080:intron 30.0%
TTGACAAAATATCTTGAGGA+GGG - tig0027465:14201-14220 Msa1434080:intron 30.0%
ACAAAAAAAATATGGGAGCA+TGG + tig0027465:14298-14317 None:intergenic 30.0%
!! AATGTTTGATTTTGTTGCGT+TGG - tig0027465:14350-14369 Msa1434080:intron 30.0%
TGCTCCAAAGAAGAATAAAA+AGG - tig0027465:14639-14658 Msa1434080:intron 30.0%
GTAAGAAAATGTTCAAACTG+TGG - tig0027465:14673-14692 Msa1434080:intron 30.0%
!!! CTTTACTGATTTTGGTACAC+CGG - tig0027465:8608-8627 Msa1434080:CDS 35.0%
GAAACATATCCGATCATTGT+TGG - tig0027465:8669-8688 Msa1434080:CDS 35.0%
AAGAATACTCAAGGGAATAC+AGG - tig0027465:8771-8790 Msa1434080:CDS 35.0%
!! GATTATAGTGCTGGTGATAA+AGG - tig0027465:8852-8871 Msa1434080:CDS 35.0%
! GAAGATGATGATGTAGTTGT+TGG - tig0027465:9017-9036 Msa1434080:intron 35.0%
CATTAACTGCTGAAGGAATA+AGG - tig0027465:9063-9082 Msa1434080:intron 35.0%
!! CCGGGTTATGTTTTTAAATC+TGG + tig0027465:9148-9167 None:intergenic 35.0%
TCTCATCATGTGTGATTCTT+CGG - tig0027465:9384-9403 Msa1434080:intron 35.0%
AAATCGCGAAATCAGATAAG+AGG + tig0027465:9540-9559 None:intergenic 35.0%
TCATTCTGTAGTTTCTGTTG+TGG - tig0027465:9576-9595 Msa1434080:intron 35.0%
GTAGTTTCTGTTGTGGATTT+AGG - tig0027465:9583-9602 Msa1434080:intron 35.0%
TGTTGTGGATTTAGGGATTT+AGG - tig0027465:9591-9610 Msa1434080:intron 35.0%
GTTGTGGATTTAGGGATTTA+GGG - tig0027465:9592-9611 Msa1434080:intron 35.0%
! TTAGGGATTTAGGGATTTTG+TGG - tig0027465:9601-9620 Msa1434080:CDS 35.0%
GGTGAAAATGACAATCTTAG+TGG - tig0027465:9860-9879 Msa1434080:intron 35.0%
AAATGACAATCTTAGTGGAG+AGG - tig0027465:9865-9884 Msa1434080:intron 35.0%
AGTAAGTACTCCAATAACAC+AGG + tig0027465:9929-9948 None:intergenic 35.0%
! GTTATTGGAGTACTTACTTC+AGG - tig0027465:9931-9950 Msa1434080:intron 35.0%
CAGCAAAGTGACATACAAAT+CGG - tig0027465:10066-10085 Msa1434080:intron 35.0%
ATTGTGACAATGTGATTGTG+AGG - tig0027465:10245-10264 Msa1434080:intron 35.0%
TGAATCTTGTAAGCATGTGA+GGG + tig0027465:10399-10418 None:intergenic 35.0%
TTGAATCTTGTAAGCATGTG+AGG + tig0027465:10400-10419 None:intergenic 35.0%
AAGTGTTCAGGGAAGAAAAA+GGG + tig0027465:10645-10664 None:intergenic 35.0%
! AAAGTGTTCAGGGAAGAAAA+AGG + tig0027465:10646-10665 None:intergenic 35.0%
ACATCACACTTACTTGAACT+AGG + tig0027465:10789-10808 None:intergenic 35.0%
TTAACATGTGATTGTTGGGT+TGG - tig0027465:10827-10846 Msa1434080:CDS 35.0%
! GAAGACTTTTACCAAGTAGA+AGG - tig0027465:11000-11019 Msa1434080:intron 35.0%
AGTTCTTGTAAAAGCCTACT+TGG + tig0027465:11032-11051 None:intergenic 35.0%
! AAGTAGGCTTTTACAAGAAC+TGG - tig0027465:11031-11050 Msa1434080:intron 35.0%
! AGTAGGCTTTTACAAGAACT+GGG - tig0027465:11032-11051 Msa1434080:intron 35.0%
GTTTATTAGTGAGGCATATC+TGG - tig0027465:11261-11280 Msa1434080:intron 35.0%
TAACACGAAAGGCTAGATTT+AGG + tig0027465:11345-11364 None:intergenic 35.0%
TCTACCATACCTGTCAAATT+CGG + tig0027465:11936-11955 None:intergenic 35.0%
GATTATCTTATGATCAAGGG+AGG - tig0027465:12140-12159 Msa1434080:CDS 35.0%
TAAATCGGCCACCTATAAAT+CGG - tig0027465:12649-12668 Msa1434080:CDS 35.0%
! GTATTTTCTGCACTAGTGAA+TGG - tig0027465:12715-12734 Msa1434080:CDS 35.0%
!!! AGTGTAATGGTTTTGCTGTT+AGG - tig0027465:12786-12805 Msa1434080:intron 35.0%
CTGTTAGGAAGAGTGATATT+AGG - tig0027465:12801-12820 Msa1434080:intron 35.0%
GATATTAGGCGCAATGTTAA+CGG - tig0027465:12815-12834 Msa1434080:intron 35.0%
TTAACGGTGAGATTGTAATG+AGG - tig0027465:12831-12850 Msa1434080:intron 35.0%
! CACAACATATCTACCCTTTT+TGG + tig0027465:12981-13000 None:intergenic 35.0%
TGCATTTACACCCTGTTTAT+CGG - tig0027465:13050-13069 Msa1434080:CDS 35.0%
! CGGATATTTTCCGATAAACA+GGG + tig0027465:13063-13082 None:intergenic 35.0%
! TCGGATATTTTCCGATAAAC+AGG + tig0027465:13064-13083 None:intergenic 35.0%
TGTTTATCGGAAAATATCCG+AGG - tig0027465:13063-13082 Msa1434080:CDS 35.0%
AATCTGTGCTTTATCTACCT+CGG + tig0027465:13083-13102 None:intergenic 35.0%
GTAGATAAAGCACAGATTGA+TGG - tig0027465:13085-13104 Msa1434080:intron 35.0%
! TCATATAATGGGATACATGG+TGG - tig0027465:13135-13154 Msa1434080:intron 35.0%
AGTGGCAGAATATTCACAAA+AGG + tig0027465:13308-13327 None:intergenic 35.0%
!! AAATGTCTATTTTGGGCAGA+TGG - tig0027465:13343-13362 Msa1434080:intron 35.0%
!! AGTTATATTTGGTGCTGCAT+TGG - tig0027465:13486-13505 Msa1434080:intron 35.0%
! GACCAGTTTTCTAGATTGTA+TGG - tig0027465:13546-13565 Msa1434080:intron 35.0%
TCCCATACAATCTAGAAAAC+TGG + tig0027465:13551-13570 None:intergenic 35.0%
!!! TGCCAAGAATTCAGCTTTTT+TGG - tig0027465:13696-13715 Msa1434080:intron 35.0%
!!! TGAAATTGAAGAGTTTTGGG+GGG - tig0027465:13759-13778 Msa1434080:intron 35.0%
ATGGAATTGAGAACAATCCA+TGG - tig0027465:13797-13816 Msa1434080:intron 35.0%
TGGAATTGAGAACAATCCAT+GGG - tig0027465:13798-13817 Msa1434080:intron 35.0%
!!! TCATATGTTTTGGTAACCCA+TGG + tig0027465:13817-13836 None:intergenic 35.0%
!! ATTTCTGCACAATTTTGACG+AGG - tig0027465:13966-13985 Msa1434080:intron 35.0%
GTGAAGGAAAAAGAAGTGAA+TGG - tig0027465:14159-14178 Msa1434080:intron 35.0%
GTTGACAAAATATCTTGAGG+AGG - tig0027465:14200-14219 Msa1434080:intron 35.0%
!! CAAACATTCTGGAATGTGTT+CGG + tig0027465:14338-14357 None:intergenic 35.0%
CGCAACAAAATCAAACATTC+TGG + tig0027465:14349-14368 None:intergenic 35.0%
!! GAAGATTGGTTTCTTGAATG+TGG - tig0027465:14384-14403 Msa1434080:intron 35.0%
! TTCTTGAATGTGGACTATTG+TGG - tig0027465:14394-14413 Msa1434080:intron 35.0%
! TCTTGAATGTGGACTATTGT+GGG - tig0027465:14395-14414 Msa1434080:intron 35.0%
! GGAAGTAGATTCTAAGTTGA+TGG - tig0027465:14417-14436 Msa1434080:intron 35.0%
TGGATGACATACAAAAGCTT+CGG - tig0027465:14527-14546 Msa1434080:intron 35.0%
CAGTAACAATTGGAACTTCA+GGG + tig0027465:14567-14586 None:intergenic 35.0%
GTTGAGTTTCCAGTAACAAT+TGG + tig0027465:14577-14596 None:intergenic 35.0%
TGTTACTGGAAACTCAACAA+TGG - tig0027465:14579-14598 Msa1434080:intron 35.0%
! GGTGCCTTTTTATTCTTCTT+TGG + tig0027465:14646-14665 None:intergenic 35.0%
! CAGCACATGTCTTTTTCTTT+GGG + tig0027465:15014-15033 None:intergenic 35.0%
! CAGCACATGTCTTTTTCTTT+GGG + tig0027465:15014-15033 None:intergenic 35.0%
CGGTGTACCAAAATCAGTAA+AGG + tig0027465:8610-8629 None:intergenic 40.0%
GTAGAACCGTAATCATGTTC+CGG + tig0027465:8630-8649 None:intergenic 40.0%
GGAACATGATTACGGTTCTA+CGG - tig0027465:8629-8648 Msa1434080:CDS 40.0%
! GATGATGATGATGTGAGTCA+TGG - tig0027465:8738-8757 Msa1434080:CDS 40.0%
GATGAGCGATATGAAGAAAC+TGG - tig0027465:8795-8814 Msa1434080:CDS 40.0%
GGAGACAATGAAAGTGATGA+TGG - tig0027465:8816-8835 Msa1434080:CDS 40.0%
!! GACAATGAAAGTGATGATGG+TGG - tig0027465:8819-8838 Msa1434080:CDS 40.0%
TGTTCTGGTGATTATAGTGC+TGG - tig0027465:8843-8862 Msa1434080:CDS 40.0%
GGTGATAAAGGTGAAGATGA+TGG - tig0027465:8864-8883 Msa1434080:CDS 40.0%
AGTGAATGCGATGAAAGTCA+AGG - tig0027465:8888-8907 Msa1434080:intron 40.0%
GATGAAAGTCAAGGTGATGA+AGG - tig0027465:8897-8916 Msa1434080:intron 40.0%
AGTGAAGGTGATGAAAGTGA+AGG - tig0027465:8948-8967 Msa1434080:intron 40.0%
AGTGAAGGTGATGAAAGTGA+AGG - tig0027465:8948-8967 Msa1434080:intron 40.0%
! TGATGATGTAGTTGTTGGTG+AGG - tig0027465:9022-9041 Msa1434080:intron 40.0%
! TGTAGTTGTTGGTGAGGAAA+TGG - tig0027465:9028-9047 Msa1434080:intron 40.0%
! TTGTTGGTGAGGAAATGGTA+AGG - tig0027465:9033-9052 Msa1434080:intron 40.0%
AAACACTGAACTCTCTCTTC+AGG - tig0027465:9259-9278 Msa1434080:intron 40.0%
AGAACGCAGTGAAGAAAGTT+TGG + tig0027465:9313-9332 None:intergenic 40.0%
ACACATGATGAGAATATGGG+AGG + tig0027465:9377-9396 None:intergenic 40.0%
CAAATCGCATACCCTAGATT+TGG + tig0027465:9447-9466 None:intergenic 40.0%
! TTAGGGATTTTGTGGATCTC+AGG - tig0027465:9609-9628 Msa1434080:CDS 40.0%
! TTGGAGTACTTACTTCAGGT+TGG - tig0027465:9935-9954 Msa1434080:intron 40.0%
GTTGGTCACAGCTTCAAAAT+GGG + tig0027465:10277-10296 None:intergenic 40.0%
AGTTGGTCACAGCTTCAAAA+TGG + tig0027465:10278-10297 None:intergenic 40.0%
ACAAAATGACGCTCGAATCT+TGG + tig0027465:10507-10526 None:intergenic 40.0%
TATCACCTAGTAGCATGGTT+TGG - tig0027465:10606-10625 Msa1434080:CDS 40.0%
! TTTGGTAGGATCGTCTTTTG+GGG + tig0027465:10697-10716 None:intergenic 40.0%
! GTTTGGTAGGATCGTCTTTT+GGG + tig0027465:10698-10717 None:intergenic 40.0%
!! CTTTTGTGGGTTACAAGTCT+GGG - tig0027465:10733-10752 Msa1434080:CDS 40.0%
TGGGATGACCCATATAGTTA+GGG - tig0027465:10752-10771 Msa1434080:intron 40.0%
TCATAAGAAAGAGACATGCG+AGG - tig0027465:10922-10941 Msa1434080:CDS 40.0%
ACTCCAACAACAACAATTGG+GGG + tig0027465:10968-10987 None:intergenic 40.0%
CACTCCAACAACAACAATTG+GGG + tig0027465:10969-10988 None:intergenic 40.0%
CCACTCCAACAACAACAATT+GGG + tig0027465:10970-10989 None:intergenic 40.0%
ACCACTCCAACAACAACAAT+TGG + tig0027465:10971-10990 None:intergenic 40.0%
! ATTGTTGTTGTTGGAGTGGT+AGG - tig0027465:10971-10990 Msa1434080:intron 40.0%
CTTGGTAAAAGCCTTCTACT+TGG + tig0027465:11014-11033 None:intergenic 40.0%
! GTAGAAGGCTTTTACCAAGT+AGG - tig0027465:11015-11034 Msa1434080:intron 40.0%
TCTTGTTCTTGCTCATACTC+AGG - tig0027465:11167-11186 Msa1434080:intron 40.0%
ACTGAAGGTAAGGAAGTTGA+AGG - tig0027465:11529-11548 Msa1434080:intron 40.0%
CTGAAGGTAAGGAAGTTGAA+GGG - tig0027465:11530-11549 Msa1434080:intron 40.0%
AGCTCATTTGATGGAAATCC+AGG - tig0027465:11568-11587 Msa1434080:CDS 40.0%
TTGATGGAAATCCAGGTGAA+TGG - tig0027465:11575-11594 Msa1434080:CDS 40.0%
TTTGGAAAACTGCATCCACT+GGG + tig0027465:11655-11674 None:intergenic 40.0%
!! TTTTGGAAAACTGCATCCAC+TGG + tig0027465:11656-11675 None:intergenic 40.0%
!! ATGAAGGTGTTGTAACTCGT+TGG - tig0027465:11720-11739 Msa1434080:intron 40.0%
!! TGAAGGTGTTGTAACTCGTT+GGG - tig0027465:11721-11740 Msa1434080:intron 40.0%
CTTAGGAAGGTTGCTTGTAT+TGG - tig0027465:11779-11798 Msa1434080:intron 40.0%
TGGCAACTGTGAAAGAAACA+CGG + tig0027465:11820-11839 None:intergenic 40.0%
TGTTTCTTTCACAGTTGCCA+GGG - tig0027465:11820-11839 Msa1434080:intron 40.0%
GATATCATCATCGTATCGAG+CGG - tig0027465:11855-11874 Msa1434080:CDS 40.0%
GCGGAATAAGAAGATCTACA+AGG - tig0027465:11874-11893 Msa1434080:CDS 40.0%
! ATACCTGTCAAATTCGGTGA+TGG + tig0027465:11930-11949 None:intergenic 40.0%
ATCACCGAATTTGACAGGTA+TGG - tig0027465:11929-11948 Msa1434080:CDS 40.0%
TGAGAAGGATATTACTCCGA+TGG - tig0027465:12085-12104 Msa1434080:intron 40.0%
GAGAAGGATATTACTCCGAT+GGG - tig0027465:12086-12105 Msa1434080:intron 40.0%
GATTCACCACACCATAATGA+GGG + tig0027465:12118-12137 None:intergenic 40.0%
TGATTCACCACACCATAATG+AGG + tig0027465:12119-12138 None:intergenic 40.0%
GTTTACATGACGAGACATTG+TGG - tig0027465:12303-12322 Msa1434080:intron 40.0%
GTGAACATCCGATTTATAGG+TGG + tig0027465:12660-12679 None:intergenic 40.0%
CAGTATGTATGCAACAAGCA+GGG - tig0027465:12854-12873 Msa1434080:intron 40.0%
AGTATGTATGCAACAAGCAG+GGG - tig0027465:12855-12874 Msa1434080:intron 40.0%
!! TTTTGGGTCTGTAGTGAACA+CGG + tig0027465:12964-12983 None:intergenic 40.0%
TGTTCACTACAGACCCAAAA+AGG - tig0027465:12964-12983 Msa1434080:intron 40.0%
GTTCACTACAGACCCAAAAA+GGG - tig0027465:12965-12984 Msa1434080:intron 40.0%
!! TGTAAATGCACAGCATTGGT+TGG + tig0027465:13040-13059 None:intergenic 40.0%
! ATTGATGGTCTTCAGTCACA+CGG - tig0027465:13100-13119 Msa1434080:intron 40.0%
TTTCTTAGTGAACCCAACAC+CGG + tig0027465:13179-13198 None:intergenic 40.0%
! ATGCGTGCTGTTATTAAGGA+TGG - tig0027465:13226-13245 Msa1434080:intron 40.0%
TTTCAAACGTTCGTCATCAG+TGG + tig0027465:13326-13345 None:intergenic 40.0%
!! TTATTTCTGCTTTGGCGATG+TGG - tig0027465:13381-13400 Msa1434080:intron 40.0%
GAACAAATACCACTATCCGT+TGG - tig0027465:13429-13448 Msa1434080:intron 40.0%
ACAAAATCACCAACGGATAG+TGG + tig0027465:13441-13460 None:intergenic 40.0%
CAGCAAGACAAAATCACCAA+CGG + tig0027465:13448-13467 None:intergenic 40.0%
! CCATCTGTTACAACTGCTTT+TGG + tig0027465:13583-13602 None:intergenic 40.0%
CCAAAAGCAGTTGTAACAGA+TGG - tig0027465:13580-13599 Msa1434080:intron 40.0%
GCATCTGAACAAGAATGCTA+TGG - tig0027465:13669-13688 Msa1434080:intron 40.0%
!! AATTTTGACGAGGCAATGAG+AGG - tig0027465:13976-13995 Msa1434080:intron 40.0%
TGCAGGAAATTTGAATCTCG+AGG - tig0027465:14268-14287 Msa1434080:intron 40.0%
GCAGGAAATTTGAATCTCGA+GGG - tig0027465:14269-14288 Msa1434080:intron 40.0%
CAGGAAATTTGAATCTCGAG+GGG - tig0027465:14270-14289 Msa1434080:intron 40.0%
TTTGTTGCGTTGGACGAAAA+AGG - tig0027465:14360-14379 Msa1434080:intron 40.0%
! CTTGAATGTGGACTATTGTG+GGG - tig0027465:14396-14415 Msa1434080:intron 40.0%
TTGATGGAGATTGCTCGATA+TGG - tig0027465:14433-14452 Msa1434080:intron 40.0%
! AGCATACAAGCTACCCTTTT+TGG + tig0027465:14500-14519 None:intergenic 40.0%
GGATGACATACAAAAGCTTC+GGG - tig0027465:14528-14547 Msa1434080:intron 40.0%
CCAGTAACAATTGGAACTTC+AGG + tig0027465:14568-14587 None:intergenic 40.0%
CCTGAAGTTCCAATTGTTAC+TGG - tig0027465:14565-14584 Msa1434080:intron 40.0%
AAAAAGACATTCAGTGTCCG+CGG + tig0027465:14728-14747 None:intergenic 40.0%
! GCAGCACATGTCTTTTTCTT+TGG + tig0027465:15015-15034 None:intergenic 40.0%
! GCAGCACATGTCTTTTTCTT+TGG + tig0027465:15015-15034 None:intergenic 40.0%
GGTACACCGGAACATGATTA+CGG - tig0027465:8621-8640 Msa1434080:CDS 45.0%
TGATTACGGTTCTACGGATG+TGG - tig0027465:8635-8654 Msa1434080:CDS 45.0%
TATCCGATCATTGTTGGGAG+TGG - tig0027465:8675-8694 Msa1434080:CDS 45.0%
!! AGTGATGATGGTGGTTGTTC+TGG - tig0027465:8828-8847 Msa1434080:CDS 45.0%
AGTCAAGGTGATGAAGGTGA+AGG - tig0027465:8903-8922 Msa1434080:intron 45.0%
GGTGAAGGTGATGAAAGTGA+AGG - tig0027465:8918-8937 Msa1434080:intron 45.0%
AGTGAAGGTCATGCTAGTGA+AGG - tig0027465:8933-8952 Msa1434080:intron 45.0%
GGTGATGAAAGTGAAGGTCA+TGG - tig0027465:8924-8943 Msa1434080:intron 45.0%
! AGTGAAGGTCATGGTAGTGA+AGG - tig0027465:8978-8997 Msa1434080:intron 45.0%
CATGATGAGAATATGGGAGG+TGG + tig0027465:9374-9393 None:intergenic 45.0%
TGACAATCTTAGTGGAGAGG+AGG - tig0027465:9868-9887 Msa1434080:intron 45.0%
GACAATCTTAGTGGAGAGGA+GGG - tig0027465:9869-9888 Msa1434080:intron 45.0%
AGCGAATGAGCCTGTGTTAT+TGG - tig0027465:9916-9935 Msa1434080:intron 45.0%
! CGAATCTTGGAAGCATGTGA+AGG + tig0027465:10494-10513 None:intergenic 45.0%
AGCAACCAAACCATGCTACT+AGG + tig0027465:10614-10633 None:intergenic 45.0%
!! GGTTTGGTAGGATCGTCTTT+TGG + tig0027465:10699-10718 None:intergenic 45.0%
ACAAAAGGAGTCAACCTGCA+TGG + tig0027465:10720-10739 None:intergenic 45.0%
!! ATGCAGGTTGACTCCTTTTG+TGG - tig0027465:10719-10738 Msa1434080:CDS 45.0%
!! TGCAGGTTGACTCCTTTTGT+GGG - tig0027465:10720-10739 Msa1434080:CDS 45.0%
CCAGACTTGTAACCCACAAA+AGG + tig0027465:10735-10754 None:intergenic 45.0%
!! CCTTTTGTGGGTTACAAGTC+TGG - tig0027465:10732-10751 Msa1434080:CDS 45.0%
CTGGGATGACCCATATAGTT+AGG - tig0027465:10751-10770 Msa1434080:intron 45.0%
GATGACCCATATAGTTAGGG+AGG - tig0027465:10755-10774 Msa1434080:intron 45.0%
CTCCACCTCCCTAACTATAT+GGG + tig0027465:10763-10782 None:intergenic 45.0%
TCTCCACCTCCCTAACTATA+TGG + tig0027465:10764-10783 None:intergenic 45.0%
! ACTCCCCCAATTGTTGTTGT+TGG - tig0027465:10962-10981 Msa1434080:intron 45.0%
! CCCAATTGTTGTTGTTGGAG+TGG - tig0027465:10967-10986 Msa1434080:intron 45.0%
CTGGGCCAAATCAAAGAAGA+AGG - tig0027465:11050-11069 Msa1434080:intron 45.0%
ATGGAAATCCAGGTGAATGG+TGG - tig0027465:11578-11597 Msa1434080:CDS 45.0%
TTACTGTTCCACCATTCACC+TGG + tig0027465:11589-11608 None:intergenic 45.0%
TGTATGCATAGTCCACCTTC+TGG + tig0027465:11613-11632 None:intergenic 45.0%
CTTCGAAAAGCAAATCCCAG+TGG - tig0027465:11637-11656 Msa1434080:CDS 45.0%
!! GAAGGTGTTGTAACTCGTTG+GGG - tig0027465:11722-11741 Msa1434080:intron 45.0%
GAAAGACTCACAGAGGTCTT+AGG - tig0027465:11762-11781 Msa1434080:intron 45.0%
GGCAACTGTGAAAGAAACAC+GGG + tig0027465:11819-11838 None:intergenic 45.0%
GTGTTTCTTTCACAGTTGCC+AGG - tig0027465:11819-11838 Msa1434080:intron 45.0%
TGATGGCTGTATGTGACTCT+TGG + tig0027465:11913-11932 None:intergenic 45.0%
AAGGATATTACTCCGATGGG+TGG - tig0027465:12089-12108 Msa1434080:intron 45.0%
TAATGAGGGAATCCACCCAT+CGG + tig0027465:12104-12123 None:intergenic 45.0%
! ATGGGTGGATTCCCTCATTA+TGG - tig0027465:12104-12123 Msa1434080:intron 45.0%
TGGATTCCCTCATTATGGTG+TGG - tig0027465:12109-12128 Msa1434080:CDS 45.0%
CGGGTGAACATCCGATTTAT+AGG + tig0027465:12663-12682 None:intergenic 45.0%
GCAGTATGTATGCAACAAGC+AGG - tig0027465:12853-12872 Msa1434080:intron 45.0%
! CATTGGTTGGAGTAGGTTCA+TGG + tig0027465:13027-13046 None:intergenic 45.0%
AGGGTGTAAATGCACAGCAT+TGG + tig0027465:13044-13063 None:intergenic 45.0%
TTCTTAGTGAACCCAACACC+GGG + tig0027465:13178-13197 None:intergenic 45.0%
AAAGGAATGGGGATCAGTTG+AGG + tig0027465:13290-13309 None:intergenic 45.0%
!! ATTTGGTGCTGCATTGGTGA+TGG - tig0027465:13492-13511 Msa1434080:intron 45.0%
GCAGTTGTAACAGATGGTGA+CGG - tig0027465:13586-13605 Msa1434080:intron 45.0%
!! AGATGGTGACGGTTCTATGA+GGG - tig0027465:13597-13616 Msa1434080:intron 45.0%
TTCTATGAGGGAGGCGATAA+AGG - tig0027465:13609-13628 Msa1434080:intron 45.0%
TACGTGCGTGACGATTTCTT+TGG - tig0027465:13862-13881 Msa1434080:intron 45.0%
CGAGGCTGCTGAAATCTATA+CGG - tig0027465:14083-14102 Msa1434080:intron 45.0%
!! GATCTCAGCAGTGTTTTTGC+AGG - tig0027465:14251-14270 Msa1434080:intron 45.0%
TGGACGAAAAAGGCGAAGAT+TGG - tig0027465:14370-14389 Msa1434080:intron 45.0%
!! TTGCAGGGAAGTGTCCAAAA+AGG - tig0027465:14483-14502 Msa1434080:intron 45.0%
!! TGCAGGGAAGTGTCCAAAAA+GGG - tig0027465:14484-14503 Msa1434080:intron 45.0%
! TAGCTTGTATGCTGATGTGC+TGG - tig0027465:14507-14526 Msa1434080:intron 45.0%
TGATGCCAGAAAATGTTCCG+CGG - tig0027465:14708-14727 Msa1434080:intron 45.0%
CAAAGGGAGGCAAATCAAAG+AGG - tig0027465:14794-14813 Msa1434080:CDS 45.0%
AGAAAGATGCTCAGTGCTTG+CGG + tig0027465:14830-14849 None:intergenic 45.0%
!! CAAGCACTGAGCATCTTTCT+GGG - tig0027465:14830-14849 Msa1434080:CDS 45.0%
CATGCTAGCCAAAAAGACGT+GGG - tig0027465:15069-15088 Msa1434080:CDS 45.0%
TAGCTAGCATGCTGAGACAT+GGG + tig0027465:15162-15181 None:intergenic 45.0%
TTAGCTAGCATGCTGAGACA+TGG + tig0027465:15163-15182 None:intergenic 45.0%
!!! TTTTTTAATTTTTAGATAAT+TGG - tig0027465:9792-9811 Msa1434080:intron 5.0%
!!! TAAAATCTTTTAATTTAAAT+CGG + tig0027465:12554-12573 None:intergenic 5.0%
CCACCACTCCCAACAATGAT+CGG + tig0027465:8681-8700 None:intergenic 50.0%
!!! AGAGGAGGGTTTTGTTGCCA+TGG - tig0027465:9883-9902 Msa1434080:intron 50.0%
!!! GGTTTTGTTGCCATGGTTGC+AGG - tig0027465:9890-9909 Msa1434080:intron 50.0%
ATTCGCTACACCTGCAACCA+TGG + tig0027465:9903-9922 None:intergenic 50.0%
ACGATCCTACCAAACCATGC+AGG - tig0027465:10703-10722 Msa1434080:CDS 50.0%
!! GTCAACCTGCATGGTTTGGT+AGG + tig0027465:10711-10730 None:intergenic 50.0%
AGGAGTCAACCTGCATGGTT+TGG + tig0027465:10715-10734 None:intergenic 50.0%
GACCCATATAGTTAGGGAGG+TGG - tig0027465:10758-10777 Msa1434080:intron 50.0%
TGGTGGAACAGTAAGCCAGA+AGG - tig0027465:11595-11614 Msa1434080:CDS 50.0%
TGGAACAGTAAGCCAGAAGG+TGG - tig0027465:11598-11617 Msa1434080:CDS 50.0%
CTCTGTGAGTCTTTCGTGGA+AGG + tig0027465:11757-11776 None:intergenic 50.0%
CTTCCACGAAAGACTCACAG+AGG - tig0027465:11755-11774 Msa1434080:intron 50.0%
AGACCTCTGTGAGTCTTTCG+TGG + tig0027465:11761-11780 None:intergenic 50.0%
GACTCACAGAGGTCTTAGGA+AGG - tig0027465:11766-11785 Msa1434080:intron 50.0%
CTGTGAAAGAAACACGGGCA+GGG + tig0027465:11814-11833 None:intergenic 50.0%
ACTGTGAAAGAAACACGGGC+AGG + tig0027465:11815-11834 None:intergenic 50.0%
ATATCCATTCTGACCAGCCC+TGG + tig0027465:11840-11859 None:intergenic 50.0%
GATCTACAAGGTTGGCAAGC+AGG - tig0027465:11886-11905 Msa1434080:CDS 50.0%
CAGCCATCACCGAATTTGAC+AGG - tig0027465:11924-11943 Msa1434080:CDS 50.0%
TCACGCTCTTTGCTAACTGC+AGG - tig0027465:12060-12079 Msa1434080:intron 50.0%
TGCTAACTGCAGGACTGAGA+AGG - tig0027465:12070-12089 Msa1434080:intron 50.0%
ATGATCAAGGGAGGCTGTGT+TGG - tig0027465:12149-12168 Msa1434080:CDS 50.0%
GCTGTGTTGGACCAAAGAAG+CGG - tig0027465:12162-12181 Msa1434080:CDS 50.0%
CTGTGTTGGACCAAAGAAGC+GGG - tig0027465:12163-12182 Msa1434080:CDS 50.0%
AGAGTGACAACCCGCTTCTT+TGG + tig0027465:12176-12195 None:intergenic 50.0%
! CTCGTACAAAGTGTCCAGCT+AGG - tig0027465:12936-12955 Msa1434080:intron 50.0%
!! TGCACAGCATTGGTTGGAGT+AGG + tig0027465:13034-13053 None:intergenic 50.0%
GGATACATGGTGGCTCAGAA+GGG - tig0027465:13145-13164 Msa1434080:intron 50.0%
!! CAGATGGTGACGGTTCTATG+AGG - tig0027465:13596-13615 Msa1434080:intron 50.0%
TATGAGGGAGGCGATAAAGG+CGG - tig0027465:13612-13631 Msa1434080:intron 50.0%
CATAGACGATGACGCGTACT+TGG + tig0027465:13643-13662 None:intergenic 50.0%
!!! TGAAGAGTTTTGGGGGGACT+TGG - tig0027465:13765-13784 Msa1434080:intron 50.0%
GTGCGTGACGATTTCTTTGG+TGG - tig0027465:13865-13884 Msa1434080:intron 50.0%
CAGATGAGTTGTCAGCACAG+GGG + tig0027465:14049-14068 None:intergenic 50.0%
GCAGATGAGTTGTCAGCACA+GGG + tig0027465:14050-14069 None:intergenic 50.0%
! AGGTGTTGCACTGAGTGTGA+AGG - tig0027465:14143-14162 Msa1434080:intron 50.0%
CTGGCAATGGATCACGTATG+TGG + tig0027465:14606-14625 None:intergenic 50.0%
CCTTTGCACTTCACTGGCAA+TGG + tig0027465:14619-14638 None:intergenic 50.0%
CCATTGCCAGTGAAGTGCAA+AGG - tig0027465:14616-14635 Msa1434080:intron 50.0%
! AGTGTCCGCGGAACATTTTC+TGG + tig0027465:14716-14735 None:intergenic 50.0%
TCCCACGTCTCTTTGGCTAT+CGG + tig0027465:14767-14786 None:intergenic 50.0%
ATCCTTCTCCCACGTCTCTT+TGG + tig0027465:14774-14793 None:intergenic 50.0%
AGACGTGGGAGAAGGATCAA+AGG - tig0027465:14777-14796 Msa1434080:CDS 50.0%
GACGTGGGAGAAGGATCAAA+GGG - tig0027465:14778-14797 Msa1434080:CDS 50.0%
!! GCAAGCACTGAGCATCTTTC+TGG - tig0027465:14829-14848 Msa1434080:CDS 50.0%
TGGCTAGCATGCTGAGACAT+TGG + tig0027465:14856-14875 None:intergenic 50.0%
CATGCTAGCCAGAAAGACGT+GGG - tig0027465:14865-14884 Msa1434080:CDS 50.0%
ATCCTTCTCCCACGTCTTTC+TGG + tig0027465:14876-14895 None:intergenic 50.0%
AGACGTGGGAGAAGGATCAA+AGG - tig0027465:14777-14796 Msa1434080:CDS 50.0%
GACGTGGGAGAAGGATCAAA+GGG - tig0027465:14778-14797 Msa1434080:CDS 50.0%
TGGCTAGCATGCTGAGACAT+GGG + tig0027465:14856-14875 None:intergenic 50.0%
CATGCTAGCCAGAAAGACGT+GGG - tig0027465:14865-14884 Msa1434080:CDS 50.0%
TGGCTAGCATGCTGAGACAT+GGG + tig0027465:14856-14875 None:intergenic 50.0%
TTGGCTAGCATGCTGAGACA+TGG + tig0027465:15061-15080 None:intergenic 50.0%
GCATGCTAGCCAAAAAGACG+TGG - tig0027465:15068-15087 Msa1434080:CDS 50.0%
! ATCCTCCTCCCACGTCTTTT+TGG + tig0027465:15080-15099 None:intergenic 50.0%
CCGATCATTGTTGGGAGTGG+TGG - tig0027465:8678-8697 Msa1434080:CDS 55.0%
GGTGGAATCGAAGCAAGCTG+CGG + tig0027465:9356-9375 None:intergenic 55.0%
TGGGGAAGCTTTCACTGCAG+AGG + tig0027465:10679-10698 None:intergenic 55.0%
TCTTTCACAGTTGCCAGGGC+TGG - tig0027465:11824-11843 Msa1434080:intron 55.0%
TAGTGAACACGGAGCCTAGC+TGG + tig0027465:12953-12972 None:intergenic 55.0%
GGGATACATGGTGGCTCAGA+AGG - tig0027465:13144-13163 Msa1434080:intron 55.0%
TACATGGTGGCTCAGAAGGG+TGG - tig0027465:13148-13167 Msa1434080:intron 55.0%
GCTCAGAAGGGTGGATATCC+CGG - tig0027465:13157-13176 Msa1434080:intron 55.0%
AAGGGTGGATATCCCGGTGT+TGG - tig0027465:13163-13182 Msa1434080:intron 55.0%
AGGGTGGATATCCCGGTGTT+GGG - tig0027465:13164-13183 Msa1434080:intron 55.0%
!! TGGTGACGGTTCTATGAGGG+AGG - tig0027465:13600-13619 Msa1434080:intron 55.0%
!!! AGTTTTGGGGGGACTTGGTG+AGG - tig0027465:13770-13789 Msa1434080:intron 55.0%
!!! GTTTTGGGGGGACTTGGTGA+GGG - tig0027465:13771-13790 Msa1434080:intron 55.0%
!! GGGGACTTGGTGAGGGAAAA+TGG - tig0027465:13778-13797 Msa1434080:intron 55.0%
CAGCACAGGGGATGAAAACC+TGG + tig0027465:14037-14056 None:intergenic 55.0%
CGCAGATGAGTTGTCAGCAC+AGG + tig0027465:14051-14070 None:intergenic 55.0%
TCTGCGTTGTCTTGAACGCG+AGG - tig0027465:14065-14084 Msa1434080:intron 55.0%
! GGAGCACCTTTGCACTTCAC+TGG + tig0027465:14625-14644 None:intergenic 55.0%
TGGCTATCGGGCTGAGACAT+GGG + tig0027465:14754-14773 None:intergenic 55.0%
TTGGCTATCGGGCTGAGACA+TGG + tig0027465:14755-14774 None:intergenic 55.0%
CCCACGTCTCTTTGGCTATC+GGG + tig0027465:14766-14785 None:intergenic 55.0%
CCCGATAGCCAAAGAGACGT+GGG - tig0027465:14763-14782 Msa1434080:CDS 55.0%
AGCCAAAGAGACGTGGGAGA+AGG - tig0027465:14769-14788 Msa1434080:CDS 55.0%
GTGGGAGAAGGATCAAAGGG+AGG - tig0027465:14781-14800 Msa1434080:CDS 55.0%
GCATGCTAGCCAGAAAGACG+TGG - tig0027465:14864-14883 Msa1434080:CDS 55.0%
AGCCAGAAAGACGTGGGAGA+AGG - tig0027465:14871-14890 Msa1434080:CDS 55.0%
CTGGCTAGCATGCTGAGACA+TGG + tig0027465:14857-14876 None:intergenic 55.0%
GCATGCTAGCCAGAAAGACG+TGG - tig0027465:14864-14883 Msa1434080:CDS 55.0%
ATCCTGCTCCCACGTCTTTC+TGG + tig0027465:14978-14997 None:intergenic 55.0%
AGACGTGGGAGCAGGATCAA+AGG - tig0027465:14981-15000 Msa1434080:intron 55.0%
GACGTGGGAGCAGGATCAAA+GGG - tig0027465:14982-15001 Msa1434080:intron 55.0%
GCTAGCCAAAAAGACGTGGG+AGG - tig0027465:15072-15091 Msa1434080:CDS 55.0%
AGCCAAAAAGACGTGGGAGG+AGG - tig0027465:15075-15094 Msa1434080:CDS 55.0%
AGACGTGGGAGGAGGATCAA+AGG - tig0027465:15083-15102 Msa1434080:CDS 55.0%
GACGTGGGAGGAGGATCAAA+GGG - tig0027465:15084-15103 Msa1434080:CDS 55.0%
AATCGAAGCAAGCTGCGGCG+CGG + tig0027465:9351-9370 None:intergenic 60.0%
!! GTTGCCAGGGCTGGTCAGAA+TGG - tig0027465:11833-11852 Msa1434080:CDS 60.0%
GCCCGATAGCCAAAGAGACG+TGG - tig0027465:14762-14781 Msa1434080:CDS 60.0%
AGCCAGAAAGACGTGGGAGC+AGG - tig0027465:14973-14992 Msa1434080:intron 60.0%
GTGGGAGCAGGATCAAAGGG+AGG - tig0027465:14985-15004 Msa1434080:intron 60.0%
GTGGGAGGAGGATCAAAGGG+AGG - tig0027465:15087-15106 Msa1434080:CDS 60.0%
AAGCAAGCTGCGGCGCGGCT+TGG + tig0027465:9346-9365 None:intergenic 70.0%
! CAAGCTGCGGCGCGGCTTGG+TGG + tig0027465:9343-9362 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0027465 gene 8588 15182 8588 ID=Msa1434080;Name=Msa1434080
tig0027465 mRNA 8588 15182 8588 ID=Msa1434080-mRNA-1;Parent=Msa1434080;Name=Msa1434080-mRNA-1;_AED=0.26;_eAED=0.31;_QI=0|0|0|0.90|0.4|0.45|11|0|684
tig0027465 exon 15011 15182 15011 ID=Msa1434080-mRNA-1:exon:9001;Parent=Msa1434080-mRNA-1
tig0027465 exon 14732 14977 14732 ID=Msa1434080-mRNA-1:exon:9000;Parent=Msa1434080-mRNA-1
tig0027465 exon 12975 13085 12975 ID=Msa1434080-mRNA-1:exon:8999;Parent=Msa1434080-mRNA-1
tig0027465 exon 12582 12766 12582 ID=Msa1434080-mRNA-1:exon:8998;Parent=Msa1434080-mRNA-1
tig0027465 exon 12106 12229 12106 ID=Msa1434080-mRNA-1:exon:8997;Parent=Msa1434080-mRNA-1
tig0027465 exon 11825 12059 11825 ID=Msa1434080-mRNA-1:exon:8996;Parent=Msa1434080-mRNA-1
tig0027465 exon 11553 11688 11553 ID=Msa1434080-mRNA-1:exon:8995;Parent=Msa1434080-mRNA-1
tig0027465 exon 10784 10958 10784 ID=Msa1434080-mRNA-1:exon:8994;Parent=Msa1434080-mRNA-1
tig0027465 exon 10590 10756 10590 ID=Msa1434080-mRNA-1:exon:8993;Parent=Msa1434080-mRNA-1
tig0027465 exon 9597 9782 9597 ID=Msa1434080-mRNA-1:exon:8992;Parent=Msa1434080-mRNA-1
tig0027465 exon 8588 8905 8588 ID=Msa1434080-mRNA-1:exon:8991;Parent=Msa1434080-mRNA-1
tig0027465 CDS 15011 15182 15011 ID=Msa1434080-mRNA-1:cds;Parent=Msa1434080-mRNA-1
tig0027465 CDS 14732 14977 14732 ID=Msa1434080-mRNA-1:cds;Parent=Msa1434080-mRNA-1
tig0027465 CDS 12975 13085 12975 ID=Msa1434080-mRNA-1:cds;Parent=Msa1434080-mRNA-1
tig0027465 CDS 12582 12766 12582 ID=Msa1434080-mRNA-1:cds;Parent=Msa1434080-mRNA-1
tig0027465 CDS 12106 12229 12106 ID=Msa1434080-mRNA-1:cds;Parent=Msa1434080-mRNA-1
tig0027465 CDS 11825 12059 11825 ID=Msa1434080-mRNA-1:cds;Parent=Msa1434080-mRNA-1
tig0027465 CDS 11553 11688 11553 ID=Msa1434080-mRNA-1:cds;Parent=Msa1434080-mRNA-1
tig0027465 CDS 10784 10958 10784 ID=Msa1434080-mRNA-1:cds;Parent=Msa1434080-mRNA-1
tig0027465 CDS 10590 10756 10590 ID=Msa1434080-mRNA-1:cds;Parent=Msa1434080-mRNA-1
tig0027465 CDS 9597 9782 9597 ID=Msa1434080-mRNA-1:cds;Parent=Msa1434080-mRNA-1
tig0027465 CDS 8588 8905 8588 ID=Msa1434080-mRNA-1:cds;Parent=Msa1434080-mRNA-1
Gene Sequence

>Msa1434080

ATGGAAAACAACAACAATGCCTTTACTGATTTTGGTACACCGGAACATGATTACGGTTCTACGGATGTGGATTTGAGTGACGAAACATATCCGATCATTGTTGGGAGTGGTGGTAAATCTACTGAGAATGTTGAACAGAATGTAGATGATGATGATGATGATGTGAGTCATGGTGATGAGCGATATGAAGAAACTGGAGACAATGAAAGTGATGATGGTGGTTGTTCTGGTGATTATAGTGCTGGTGATAAAGGTGAAGATGATGGAAGTGAATGCGATGAAAGTCAAGGTGATGAAGGTGAAGGTGATGAAAGTGAAGGTCATGCTAGTGAAGGTGATGAAAGTGAAGGTGATGAAAGTGAAGGTCATGGTAGTGAAGGTGATAACAATTTAGCTGAAGATGATGATGTAGTTGTTGTGAAAGCTTCCCCAAAAGACGATCCTACCAAACCATGCAGGTTGACTCCTTTTGTGGGTTACAAGTCTGGGATGACCCATATAGTTAGGGAGGTGGAGAAACCTAGTTCAAACTTTTACCAAGTAGAAGGCTTTTACCAAGTAGGCTTTTACAAGAACTGGGCCAAATCAAAGAAGAAGGCTTTTACCAAGTATACCAAAAAATATGAAACTGATGAAGGAAAGAAAGATATTCAAACTCAGCTTGAGAAATTGAAGAAGTATGCCATTGTTATTCTTGTTCTTGCTCATACTCAGGAAGTTGAAGGGTCTAAAACAAAAGAAAGCTCATTTGATGGAAATCCAGGTGAATGGTGGAACAGTAAGCCAGAAGGTGGACTATGCATACAATTTCTTCGAAAAGCAAATCCCAGTGGATGCAGTAAAGGTTATGAAGGTGTTGTAACTCGTTGGGGTGTCACTCGCCTTCCACGAAAGACTCACAGAGGTCTTAGGAAGGTTGCTTGTATTGGTGCATGTCACCCTGCCCGTGTTTCTTTCACAGTTGCCAGGGCTGGTCAGAATGGATATCATCATCGTATCGAGCGGAATAAGAAGATCTACAAGGTTGGCAAGCAGGACCAAGAGTCACATACAGCCATCACCGAATTTGACAGGACTGAGAAGGATATTACTCCGATGGGTGGATTCCCTCATTATGGTGTGGTGAATCATGATTATCTTATGATCAAGGGAGGCTGTGTTGGACCAAAGAAGCGGGTTGTCACTCTTCGTCAGTCACTGCTCAAGCTAAGTGATATTAGGCGCAATGTTAACGGTGAGATTGTAATGAGGCAGTATGTATGCAACAAGCAGGGGTTCAGAGATAAGAAGCATTTATCAAGGTTAGATAGGCAAAGAGATCATCGACGTATCACTCGTACAAAGTGTCCAGCTAGGCTCCGTGTTCACTACAGACCCAAAAAGGAGGGTCACAACCATGAACCTACTCCAACCAATGCTGTGCATTTACACCCTGTTTATCGGAAAATATCCGAGGTAGATAAAGCACAGATTGATGGTCTTCAGTCACACGGAATAAGAACTTGTCATATAATGGGATACATGGTGGCTCAGAAGGGTGGATATCCCGGTGCAATGAGAGGCTACAGAAATAACGAACTTGTAGCTGATTTTAAATCCAGGTTTTCATCCCCTGTGCTGACAACTCATCTGCGTTGTCTTGAACGCGAGGCTGCTGAAATCTATACGGCAGAGATCTTTCAAGAAGTGAAAGAAGAAATTATGAAAGGTGTTGCACTGAGTGTGAAGGAAAAAGAACATGCTAGCCAGAAAGACGTGGGAGAAGGATCAAAGGGAGTGAAATCAAAGAAAAAGAATTGTTCTGCAAGCAATGAACATCTTTCTGCGCCCATGTCTCAGCATGCTAGCCAGAAAGACGTGGGAGCAGGATCAAAGGGAGGACACCCAAAGAAAAAGACATGTGCTGCAAGCAGTCAACATATTTCTGCGCCCATGTCTCAGCATGCTAGCCAAAAAGACGTGGGAGGAGGATCAAAGGGAGGACACCCAAAGAAAAAGACATGTGCTGCAAGCAGTCAACATATTTCTGCGCCCATGTCTCAGCATGCTAGCTAA

Protein sequence

>Msa1434080

MENNNNAFTDFGTPEHDYGSTDVDLSDETYPIIVGSGGKSTENVEQNVDDDDDDVSHGDERYEETGDNESDDGGCSGDYSAGDKGEDDGSECDESQGDEGEGDESEGHASEGDESEGDESEGHGSEGDNNLAEDDDVVVVKASPKDDPTKPCRLTPFVGYKSGMTHIVREVEKPSSNFYQVEGFYQVGFYKNWAKSKKKAFTKYTKKYETDEGKKDIQTQLEKLKKYAIVILVLAHTQEVEGSKTKESSFDGNPGEWWNSKPEGGLCIQFLRKANPSGCSKGYEGVVTRWGVTRLPRKTHRGLRKVACIGACHPARVSFTVARAGQNGYHHRIERNKKIYKVGKQDQESHTAITEFDRTEKDITPMGGFPHYGVVNHDYLMIKGGCVGPKKRVVTLRQSLLKLSDIRRNVNGEIVMRQYVCNKQGFRDKKHLSRLDRQRDHRRITRTKCPARLRVHYRPKKEGHNHEPTPTNAVHLHPVYRKISEVDKAQIDGLQSHGIRTCHIMGYMVAQKGGYPGAMRGYRNNELVADFKSRFSSPVLTTHLRCLEREAAEIYTAEIFQEVKEEIMKGVALSVKEKEHASQKDVGEGSKGVKSKKKNCSASNEHLSAPMSQHASQKDVGAGSKGGHPKKKTCAASSQHISAPMSQHASQKDVGGGSKGGHPKKKTCAASSQHISAPMSQHAS*