Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1434450 | XP_039688705.1 | 71.910 | 356 | 37 | 6 | 133 | 425 | 9 | 364 | 2.12e-151 | 444 |
Msa1434450 | XP_039688705.1 | 73.684 | 133 | 35 | 0 | 1 | 133 | 218 | 350 | 3.95e-59 | 207 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1434450 | sp|Q6X7J5|WOX8_ARATH | 33.220 | 295 | 173 | 5 | 138 | 425 | 47 | 324 | 2.03e-34 | 133 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1434450 | A0A072UNJ4 | 61.864 | 354 | 71 | 7 | 136 | 425 | 19 | 372 | 3.86e-119 | 362 |
Msa1434450 | A0A072UNJ4 | 88.722 | 133 | 14 | 1 | 1 | 133 | 227 | 358 | 1.43e-74 | 248 |
Gene ID | Type | Classification |
---|---|---|
Msa1434450 | TF | HB-WOX |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1434450 | MtrunA17_Chr7g0223471 | 49.600 | 375 | 103 | 8 | 133 | 425 | 34 | 404 | 1.19e-101 | 308 |
Msa1434450 | MtrunA17_Chr7g0223471 | 61.654 | 133 | 50 | 1 | 1 | 133 | 259 | 390 | 3.11e-48 | 169 |
Msa1434450 | MtrunA17_Chr4g0046231 | 59.385 | 325 | 68 | 7 | 165 | 425 | 1 | 325 | 2.03e-100 | 302 |
Msa1434450 | MtrunA17_Chr4g0046231 | 88.722 | 133 | 14 | 1 | 1 | 133 | 180 | 311 | 1.81e-78 | 246 |
Msa1434450 | MtrunA17_Chr4g0046241 | 73.134 | 134 | 10 | 3 | 252 | 359 | 2 | 135 | 1.33e-53 | 176 |
Msa1434450 | MtrunA17_Chr4g0046241 | 83.951 | 81 | 13 | 0 | 1 | 81 | 89 | 169 | 3.52e-41 | 144 |
Msa1434450 | MtrunA17_Chr2g0283141 | 36.267 | 375 | 138 | 11 | 137 | 425 | 46 | 405 | 1.54e-49 | 174 |
Msa1434450 | MtrunA17_Chr4g0046251 | 88.235 | 68 | 8 | 0 | 358 | 425 | 17 | 84 | 4.77e-38 | 132 |
Msa1434450 | MtrunA17_Chr4g0046251 | 56.364 | 55 | 24 | 0 | 79 | 133 | 16 | 70 | 1.83e-14 | 68.6 |
Msa1434450 | MtrunA17_Chr6g0460691 | 60.000 | 60 | 24 | 0 | 138 | 197 | 24 | 83 | 1.82e-19 | 88.6 |
Msa1434450 | MtrunA17_Chr7g0254251 | 60.345 | 58 | 23 | 0 | 138 | 195 | 20 | 77 | 1.79e-17 | 82.0 |
Msa1434450 | MtrunA17_Chr4g0043891 | 44.262 | 61 | 34 | 0 | 141 | 201 | 3 | 63 | 1.19e-12 | 67.8 |
Msa1434450 | MtrunA17_Chr8g0392991 | 40.000 | 80 | 42 | 2 | 146 | 223 | 96 | 171 | 4.75e-12 | 67.0 |
Msa1434450 | MtrunA17_Chr5g0436661 | 31.933 | 119 | 61 | 3 | 146 | 244 | 33 | 151 | 1.81e-11 | 62.8 |
Msa1434450 | MtrunA17_Chr5g0405351 | 29.787 | 141 | 68 | 3 | 146 | 255 | 30 | 170 | 5.29e-11 | 63.5 |
Msa1434450 | MtrunA17_Chr1g0212511 | 37.097 | 62 | 39 | 0 | 143 | 204 | 82 | 143 | 7.21e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1434450 | AT5G45980.1 | 33.220 | 295 | 173 | 5 | 138 | 425 | 47 | 324 | 2.07e-35 | 133 |
Msa1434450 | AT2G33880.1 | 65.714 | 70 | 24 | 0 | 134 | 203 | 43 | 112 | 1.69e-27 | 113 |
Msa1434450 | AT2G33880.1 | 49.153 | 59 | 30 | 0 | 367 | 425 | 319 | 377 | 2.61e-12 | 68.6 |
Msa1434450 | AT2G33880.2 | 65.714 | 70 | 24 | 0 | 134 | 203 | 43 | 112 | 1.89e-27 | 113 |
Msa1434450 | AT2G33880.2 | 49.153 | 59 | 30 | 0 | 367 | 425 | 319 | 377 | 3.13e-12 | 68.2 |
Msa1434450 | AT5G17810.3 | 62.963 | 54 | 20 | 0 | 144 | 197 | 19 | 72 | 6.05e-18 | 84.0 |
Msa1434450 | AT5G17810.1 | 62.963 | 54 | 20 | 0 | 144 | 197 | 19 | 72 | 6.15e-18 | 84.0 |
Msa1434450 | AT5G17810.2 | 62.963 | 54 | 20 | 0 | 144 | 197 | 19 | 72 | 6.15e-18 | 84.0 |
Msa1434450 | AT3G03660.1 | 61.111 | 54 | 21 | 0 | 144 | 197 | 31 | 84 | 1.30e-17 | 82.8 |
Msa1434450 | AT3G03660.2 | 61.111 | 54 | 21 | 0 | 144 | 197 | 31 | 84 | 2.08e-17 | 82.8 |
Msa1434450 | AT3G03660.4 | 61.111 | 54 | 21 | 0 | 144 | 197 | 31 | 84 | 2.77e-17 | 82.4 |
Msa1434450 | AT3G03660.3 | 61.111 | 54 | 21 | 0 | 144 | 197 | 31 | 84 | 4.11e-17 | 82.4 |
Msa1434450 | AT2G17950.1 | 41.250 | 80 | 45 | 2 | 146 | 223 | 38 | 117 | 3.94e-12 | 67.0 |
Msa1434450 | AT5G05770.1 | 36.000 | 75 | 41 | 1 | 146 | 213 | 29 | 103 | 1.49e-11 | 62.0 |
Msa1434450 | AT3G18010.1 | 44.643 | 56 | 31 | 0 | 146 | 201 | 76 | 131 | 3.44e-11 | 64.7 |
Msa1434450 | AT1G20700.1 | 32.967 | 91 | 58 | 1 | 130 | 220 | 79 | 166 | 4.23e-11 | 62.8 |
Msa1434450 | AT1G20700.2 | 36.364 | 77 | 46 | 1 | 144 | 220 | 31 | 104 | 4.55e-11 | 61.2 |
Msa1434450 | AT1G20700.3 | 32.967 | 91 | 58 | 1 | 130 | 220 | 79 | 166 | 6.30e-11 | 62.0 |
Find 118 sgRNAs with CRISPR-Local
Find 553 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAGACCCGCAATTTAATTT+TGG | 0.177107 | tig0027531:-23649 | Msa1434450:CDS |
CAAGACCCACAACTTAATTT+TGG | 0.181827 | tig0027531:-15474 | Msa1434450:CDS |
TGTTTCCTGTTTCTTGTTAT+AGG | 0.203606 | tig0027531:+15959 | None:intergenic |
CGTGGACAATTAGAAGAATT+TGG | 0.217411 | tig0027531:-16053 | Msa1434450:CDS |
GGTAGGGATTGACTCATATT+TGG | 0.224718 | tig0027531:+15627 | None:intergenic |
AAGAATTTACGAACGTTAAA+AGG | 0.235477 | tig0027531:+14888 | None:intergenic |
TCATCTTCCTCTAACAATAT+TGG | 0.243443 | tig0027531:-15870 | Msa1434450:CDS |
GTTTCCTGTTTCTTGTTATA+GGG | 0.246182 | tig0027531:+15960 | None:intergenic |
AAAGGATTCACGAACGTTAA+AGG | 0.277504 | tig0027531:+23259 | None:intergenic |
ATGAACAATGAAAATGAAAA+TGG | 0.285973 | tig0027531:-23748 | Msa1434450:CDS |
CCATGGGGCTGATTATTTCC+TGG | 0.287811 | tig0027531:-14784 | None:intergenic |
GATAAGTACCACCTTGGTTT+TGG | 0.292529 | tig0027531:+15787 | None:intergenic |
TTTAACGTTCGTAAATTCTT+TGG | 0.298436 | tig0027531:-14885 | Msa1434450:CDS |
AGAGAGATTGCAGGTGAATT+AGG | 0.299501 | tig0027531:+15813 | None:intergenic |
CACCGTCCCATCATTAATAT+TGG | 0.306396 | tig0027531:+15842 | None:intergenic |
TGCGGATTTGCTCAGGCTTT+GGG | 0.317008 | tig0027531:+16138 | None:intergenic |
ATGCGGATTTGCTCAGGCTT+TGG | 0.318582 | tig0027531:+16137 | None:intergenic |
TCAGGCTTTGGGATCCATCT+TGG | 0.322557 | tig0027531:+16149 | None:intergenic |
GAAGTTGATCATCAGTAAAA+AGG | 0.326950 | tig0027531:+23533 | None:intergenic |
TTTGGGATCCATCTTGGCCT+TGG | 0.327019 | tig0027531:+16155 | None:intergenic |
CTCAAAGCCATCTATAACTC+AGG | 0.355199 | tig0027531:-16113 | Msa1434450:CDS |
GGAGATTCCAATATTGTTAG+AGG | 0.358018 | tig0027531:+15863 | None:intergenic |
CTTGTTATAGGGTACTTTGT+TGG | 0.367143 | tig0027531:+15971 | None:intergenic |
TTTACTGATGATCAACTTCA+AGG | 0.378920 | tig0027531:-23529 | Msa1434450:intron |
AATTAAATTGCGGGTCTTGT+TGG | 0.379122 | tig0027531:+23653 | None:intergenic |
CGTCATCCCTGAGTTATAGA+TGG | 0.384216 | tig0027531:+16106 | None:intergenic |
TGACACCAAAATTAAATTGC+GGG | 0.395460 | tig0027531:+23644 | None:intergenic |
AGTGGTGGTGTGGTGATTTG+TGG | 0.396224 | tig0027531:+15906 | None:intergenic |
CCCCATTCATCGGTTAGAAC+CGG | 0.398111 | tig0027531:+23200 | None:intergenic |
CCCGGTTCTAACCGATGAAT+GGG | 0.399463 | tig0027531:-23201 | Msa1434450:CDS |
CCCCACTCATCGGTTAGAAC+CGG | 0.406777 | tig0027531:+14828 | None:intergenic |
AACATCATGACCTATGGAAA+TGG | 0.408768 | tig0027531:-15573 | Msa1434450:CDS |
ATTTGTGGGAGAGAGCTATC+TGG | 0.415068 | tig0027531:+15921 | None:intergenic |
GTGCATGTGCATCATATTCA+TGG | 0.415898 | tig0027531:+23675 | None:intergenic |
CCCTCAACTCACTCCACCAT+GGG | 0.416100 | tig0027531:-14800 | Msa1434450:CDS |
ATCCATCTTGGCCTTGGTCC+AGG | 0.421536 | tig0027531:+16161 | None:intergenic |
GGAATCTCCAATATTAATGA+TGG | 0.434654 | tig0027531:-15849 | Msa1434450:CDS |
TTTAACGTTCGTGAATCCTT+TGG | 0.434959 | tig0027531:-23257 | Msa1434450:CDS |
AATTAAGTTGTGGGTCTTGT+TGG | 0.440039 | tig0027531:+15478 | None:intergenic |
TTGAGAATGCGGATTTGCTC+AGG | 0.441470 | tig0027531:+16131 | None:intergenic |
AAGGATTCACGAACGTTAAA+GGG | 0.443421 | tig0027531:+23260 | None:intergenic |
GTGGTGGTGTGGTGATTTGT+GGG | 0.445822 | tig0027531:+15907 | None:intergenic |
CCCCGGTTCTAACCGATGAA+TGG | 0.455370 | tig0027531:-23202 | Msa1434450:CDS |
CCTCACACCCTCACTGGAAC+CGG | 0.457199 | tig0027531:-15765 | Msa1434450:intron |
GATGATGAAGAAAGAACTCC+TGG | 0.460723 | tig0027531:-16179 | Msa1434450:CDS |
ACTTGACTCCTCCGGTGTCC+CGG | 0.468788 | tig0027531:-14847 | Msa1434450:CDS |
CCCATTCATCGGTTAGAACC+GGG | 0.470305 | tig0027531:+23201 | None:intergenic |
AGTACCCTATAACAAGAAAC+AGG | 0.472976 | tig0027531:-15964 | Msa1434450:CDS |
ATGTCAATGGCCGGAGGTAG+AGG | 0.473475 | tig0027531:+23580 | None:intergenic |
TATGATAACATCATGACCTA+TGG | 0.476880 | tig0027531:-15579 | Msa1434450:CDS |
CCCGGTTCTAACCGATGAGT+GGG | 0.480119 | tig0027531:-14829 | Msa1434450:CDS |
TTAGAAGAATTTGGACCGAT+TGG | 0.480912 | tig0027531:-16044 | Msa1434450:CDS |
ACTTATCCTCACACCCTCAC+TGG | 0.497083 | tig0027531:-15771 | Msa1434450:CDS |
CTCCTGGACCAAGGCCAAGA+TGG | 0.498721 | tig0027531:-16163 | Msa1434450:CDS |
GTTCGTAAATTCTTTGGCGA+TGG | 0.502140 | tig0027531:-14879 | Msa1434450:CDS |
TAGTGCTTAATGACATGATA+AGG | 0.507658 | tig0027531:-15680 | Msa1434450:CDS |
CCCCATGGTGGAGTGAGTTG+AGG | 0.511520 | tig0027531:+14799 | None:intergenic |
ACGATGGTACAGCAAAATGT+AGG | 0.522895 | tig0027531:-14950 | Msa1434450:CDS |
GGTACATTCAAAGTTAATGC+AGG | 0.526348 | tig0027531:-14912 | Msa1434450:CDS |
CCCATGGTGGAGTGAGTTGA+GGG | 0.532190 | tig0027531:+14800 | None:intergenic |
TGAGCAGTTTCCATTTCCAT+AGG | 0.532338 | tig0027531:+15563 | None:intergenic |
GAGAAGTAATTAAACCCCTC+TGG | 0.532494 | tig0027531:+15657 | None:intergenic |
TGACACCAAAATTAAGTTGT+GGG | 0.534770 | tig0027531:+15469 | None:intergenic |
GGTGCACTCATGTCAATGGC+CGG | 0.541661 | tig0027531:+23571 | None:intergenic |
AGCAGGTGCACTCATGTCAA+TGG | 0.543766 | tig0027531:+23567 | None:intergenic |
GTTAACCTCGATTACTTCGT+TGG | 0.544175 | tig0027531:+23289 | None:intergenic |
TTGTAGACCGGTTCCAGTGA+GGG | 0.546990 | tig0027531:+15758 | None:intergenic |
AAAAGGAATGGAATATCAGC+AGG | 0.549420 | tig0027531:+23550 | None:intergenic |
GAGGGTGACACCCCATTCAT+CGG | 0.558082 | tig0027531:+23190 | None:intergenic |
TGATCAAGTGAATGTTCAAG+AGG | 0.560823 | tig0027531:-23701 | Msa1434450:CDS |
GTTTGACTCCTTCTGTACCC+CGG | 0.561060 | tig0027531:-23219 | Msa1434450:CDS |
TCCCGGTTCTAACCGATGAG+TGG | 0.562878 | tig0027531:-14830 | Msa1434450:CDS |
CTCCAATATTAATGATGGGA+CGG | 0.566336 | tig0027531:-15844 | Msa1434450:CDS |
CCCACTCATCGGTTAGAACC+GGG | 0.569151 | tig0027531:+14829 | None:intergenic |
TATAGATGGCTTTGAGAATG+CGG | 0.572647 | tig0027531:+16120 | None:intergenic |
ATCGGTTAGAACCGGGACAC+CGG | 0.573165 | tig0027531:+14836 | None:intergenic |
ACCCTCAACTCACTCCACCA+TGG | 0.573606 | tig0027531:-14801 | Msa1434450:CDS |
GAATCTCCAATATTAATGAT+GGG | 0.575519 | tig0027531:-15848 | Msa1434450:CDS |
CGATGGTACAGCAAAATGTA+GGG | 0.576909 | tig0027531:-14949 | Msa1434450:CDS |
GCAGTTCTACTTGACTCCTC+CGG | 0.578536 | tig0027531:-14855 | Msa1434450:CDS |
GGTTAGAACCGGGGTACAGA+AGG | 0.581477 | tig0027531:+23211 | None:intergenic |
TTGAAACCAATAAAAGACGC+TGG | 0.582551 | tig0027531:+16016 | None:intergenic |
TGATCTTGCTCCTCTACCTC+CGG | 0.584790 | tig0027531:-23590 | Msa1434450:CDS |
CCGGTTCCAGTGAGGGTGTG+AGG | 0.585988 | tig0027531:+15765 | None:intergenic |
GTGACACCAAAATTAAATTG+CGG | 0.589142 | tig0027531:+23643 | None:intergenic |
GAGGGTGACACCCCACTCAT+CGG | 0.597239 | tig0027531:+14818 | None:intergenic |
AAGACGCTGGAATCACCAAT+CGG | 0.600408 | tig0027531:+16029 | None:intergenic |
TTATCAAGAGAATATTCAAG+AGG | 0.601533 | tig0027531:-15526 | Msa1434450:CDS |
GAAGTAATCGAGGTTAACGC+AGG | 0.607642 | tig0027531:-23284 | Msa1434450:CDS |
TACTGCCAACGAAGTAATCG+AGG | 0.608047 | tig0027531:-23294 | Msa1434450:CDS |
TCAAAGCCATCTATAACTCA+GGG | 0.608140 | tig0027531:-16112 | Msa1434450:CDS |
GTGACACCAAAATTAAGTTG+TGG | 0.611199 | tig0027531:+15468 | None:intergenic |
CAGAACTGCTCTATTACCAA+AGG | 0.619722 | tig0027531:+23241 | None:intergenic |
TGTAGGGTGATTACTATCAA+CGG | 0.630138 | tig0027531:-14933 | Msa1434450:CDS |
TGTGAGGATAAGTACCACCT+TGG | 0.631687 | tig0027531:+15781 | None:intergenic |
GGAAATAATCAGCCCCATGG+TGG | 0.634153 | tig0027531:+14787 | None:intergenic |
GTACATTCAAAGTTAATGCA+GGG | 0.634787 | tig0027531:-14911 | Msa1434450:CDS |
GTTGTAGACCGGTTCCAGTG+AGG | 0.637143 | tig0027531:+15757 | None:intergenic |
ATCTCTCTGAGCCAAAACCA+AGG | 0.639915 | tig0027531:-15798 | Msa1434450:CDS |
TATTAATGATGGGACGGTGA+TGG | 0.642433 | tig0027531:-15838 | Msa1434450:CDS |
AAGAAAGAACTCCTGGACCA+AGG | 0.644218 | tig0027531:-16172 | Msa1434450:CDS |
AGATGAGTTGAGTGGTGGTG+TGG | 0.655150 | tig0027531:+15896 | None:intergenic |
CCAGGAAATAATCAGCCCCA+TGG | 0.655999 | tig0027531:+14784 | None:intergenic |
TAATGACATGATAAGGCCAG+AGG | 0.662717 | tig0027531:-15673 | Msa1434450:CDS |
GGTTAGAACCGGGACACCGG+AGG | 0.663701 | tig0027531:+14839 | None:intergenic |
AAGTAATCGAGGTTAACGCA+GGG | 0.673390 | tig0027531:-23283 | Msa1434450:CDS |
TTCTTAATCTCATCTCTACG+TGG | 0.679677 | tig0027531:+16080 | None:intergenic |
AATGACATGATAAGGCCAGA+GGG | 0.681201 | tig0027531:-15672 | Msa1434450:CDS |
CCGGTTCTAACCGATGAATG+GGG | 0.682846 | tig0027531:-23200 | Msa1434450:intron |
CCGGTTCTAACCGATGAGTG+GGG | 0.684812 | tig0027531:-14828 | Msa1434450:CDS |
CCATTCATCGGTTAGAACCG+GGG | 0.687831 | tig0027531:+23202 | None:intergenic |
GCACTCATGTCAATGGCCGG+AGG | 0.689498 | tig0027531:+23574 | None:intergenic |
ATGACATGATAAGGCCAGAG+GGG | 0.698753 | tig0027531:-15671 | Msa1434450:CDS |
GATGATGAAGATGAGTTGAG+TGG | 0.699555 | tig0027531:+15888 | None:intergenic |
CCTCAACTCACTCCACCATG+GGG | 0.702965 | tig0027531:-14799 | Msa1434450:CDS |
GATGAGATTAAGAAGATACG+TGG | 0.711435 | tig0027531:-16071 | Msa1434450:CDS |
GATGAAGATGAGTTGAGTGG+TGG | 0.726884 | tig0027531:+15891 | None:intergenic |
TCTCTGAGCCAAAACCAAGG+TGG | 0.727096 | tig0027531:-15795 | Msa1434450:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTATAATAATAAAATAA+TGG | - | tig0027531:15831-15850 | Msa1434450:CDS | 0.0% |
!!! | CTTTTTACTAAAAAAATTAA+AGG | + | tig0027531:15805-15824 | None:intergenic | 10.0% |
!! | AAAAATTTACTAAAAAAAAG+AGG | - | tig0027531:15906-15925 | Msa1434450:CDS | 10.0% |
!!! | TTATTTTTCATATATAACTA+TGG | - | tig0027531:16059-16078 | Msa1434450:CDS | 10.0% |
!!! | CTAAATAAAATATTCAATTT+TGG | + | tig0027531:18086-18105 | None:intergenic | 10.0% |
!!! | TTAAAATTAGGAAAATTTTA+TGG | + | tig0027531:18674-18693 | None:intergenic | 10.0% |
!! | CAAAAAAAAAAAAAAACATA+GGG | + | tig0027531:19472-19491 | None:intergenic | 10.0% |
!! | TCAAAAAAAAAAAAAAACAT+AGG | + | tig0027531:19473-19492 | None:intergenic | 10.0% |
!!! | ATCAAGATATTTTTTTTTTA+AGG | - | tig0027531:19854-19873 | Msa1434450:intron | 10.0% |
!!! | GATAATTTTATAAACAAAAA+AGG | + | tig0027531:21354-21373 | None:intergenic | 10.0% |
!!! | TTCTATAACTAATTTTTTAT+GGG | + | tig0027531:22217-22236 | None:intergenic | 10.0% |
!!! | TTTCTATAACTAATTTTTTA+TGG | + | tig0027531:22218-22237 | None:intergenic | 10.0% |
!! | AATTACAAATATAGATGATT+TGG | - | tig0027531:15520-15539 | Msa1434450:CDS | 15.0% |
!! | TATATAACTATGGATTTAAT+TGG | - | tig0027531:16069-16088 | Msa1434450:CDS | 15.0% |
!!! | TTATTTTGAAAATTACGTAT+AGG | - | tig0027531:16153-16172 | Msa1434450:CDS | 15.0% |
!! | TCCATATTACTATATTTATA+GGG | - | tig0027531:17021-17040 | Msa1434450:intron | 15.0% |
!! | AAAAATTATATATAACCACT+CGG | + | tig0027531:18007-18026 | None:intergenic | 15.0% |
!!! | TTTTGAATACGATAATTTAA+AGG | - | tig0027531:18238-18257 | Msa1434450:intron | 15.0% |
!! | TTTGAATACGATAATTTAAA+GGG | - | tig0027531:18239-18258 | Msa1434450:intron | 15.0% |
!!! | CAATCAAAGTATTTAAAATT+AGG | + | tig0027531:18686-18705 | None:intergenic | 15.0% |
!! | TATGAAATTCTATAAGAAAT+TGG | + | tig0027531:18968-18987 | None:intergenic | 15.0% |
!! | ATTTCTTATAGAATTTCATA+AGG | - | tig0027531:18968-18987 | Msa1434450:intron | 15.0% |
!! | AAATTAGAACTATTTAAACT+TGG | - | tig0027531:19388-19407 | Msa1434450:intron | 15.0% |
!! | AATTAGAACTATTTAAACTT+GGG | - | tig0027531:19389-19408 | Msa1434450:intron | 15.0% |
!!! | AAACAAATTATATATCGATT+TGG | - | tig0027531:21912-21931 | Msa1434450:intron | 15.0% |
!!! | TTCAATAAAAAAGATTTGTT+TGG | + | tig0027531:21975-21994 | None:intergenic | 15.0% |
!!! | AACAAATCTTTTTTATTGAA+TGG | - | tig0027531:21975-21994 | Msa1434450:intron | 15.0% |
!! | ATTATGATTTATATATCTCA+TGG | - | tig0027531:23461-23480 | Msa1434450:intron | 15.0% |
!! | ATGAACAATGAAAATGAAAA+TGG | - | tig0027531:14785-14804 | Msa1434450:CDS | 20.0% |
!! | TTTATAAGGGAAAATGATTT+GGG | + | tig0027531:15643-15662 | None:intergenic | 20.0% |
!!! | TTTTATAAGGGAAAATGATT+TGG | + | tig0027531:15644-15663 | None:intergenic | 20.0% |
!!! | GGGAACTTTTTTTTTTATAA+GGG | + | tig0027531:15656-15675 | None:intergenic | 20.0% |
!!! | TGGGAACTTTTTTTTTTATA+AGG | + | tig0027531:15657-15676 | None:intergenic | 20.0% |
!! | TTACCTAATCAAAATGATTT+GGG | + | tig0027531:15676-15695 | None:intergenic | 20.0% |
!! | ATTACCTAATCAAAATGATT+TGG | + | tig0027531:15677-15696 | None:intergenic | 20.0% |
!! | TTTGATTAGGTAATGATATT+TGG | - | tig0027531:15683-15702 | Msa1434450:intron | 20.0% |
!!! | AATTAGTGTTGAAGAATTAA+TGG | + | tig0027531:15712-15731 | None:intergenic | 20.0% |
!! | ATTTAATTGGTATACCTTAT+GGG | - | tig0027531:16082-16101 | Msa1434450:CDS | 20.0% |
!! | AAAAAATATTTACACCCATA+AGG | + | tig0027531:16099-16118 | None:intergenic | 20.0% |
!! | CAAACATTTCATCAAATATA+TGG | + | tig0027531:16451-16470 | None:intergenic | 20.0% |
!!! | TCATAATTTTTCTTTCTTTC+CGG | + | tig0027531:16614-16633 | None:intergenic | 20.0% |
!! | ATTTATGTAATTAATGATCG+TGG | - | tig0027531:16636-16655 | Msa1434450:intron | 20.0% |
!! | AAACTAAATTCTTTCACATA+TGG | + | tig0027531:16687-16706 | None:intergenic | 20.0% |
!!! | CTTATTTTATTGTCAAAATG+AGG | - | tig0027531:16865-16884 | Msa1434450:intron | 20.0% |
!! | CTCCATATTACTATATTTAT+AGG | - | tig0027531:17020-17039 | Msa1434450:intron | 20.0% |
!! | ACCCTATAAATATAGTAATA+TGG | + | tig0027531:17025-17044 | None:intergenic | 20.0% |
!! | TATAATTCTCATTCACTATA+CGG | + | tig0027531:17330-17349 | None:intergenic | 20.0% |
!!! | TTGATTAAAAGAGTACTAAA+AGG | + | tig0027531:17414-17433 | None:intergenic | 20.0% |
!! | TATTTGATCTTATGATGATT+TGG | + | tig0027531:17568-17587 | None:intergenic | 20.0% |
!! | AGATCAAATAGATCTTATAT+AGG | - | tig0027531:17578-17597 | Msa1434450:intron | 20.0% |
!! | ATTAAATCAAACATCTTGAA+GGG | + | tig0027531:17664-17683 | None:intergenic | 20.0% |
!! | AATTAAATCAAACATCTTGA+AGG | + | tig0027531:17665-17684 | None:intergenic | 20.0% |
!! | AGAAATGTAAAAAATGCAAA+GGG | + | tig0027531:17717-17736 | None:intergenic | 20.0% |
!! | AAGAAATGTAAAAAATGCAA+AGG | + | tig0027531:17718-17737 | None:intergenic | 20.0% |
!! | TTTAATACACATACAAACAA+AGG | + | tig0027531:17800-17819 | None:intergenic | 20.0% |
!! | ACAAGTTAGTAGTATTAATT+AGG | - | tig0027531:17841-17860 | Msa1434450:intron | 20.0% |
!! | CAAGTTAGTAGTATTAATTA+GGG | - | tig0027531:17842-17861 | Msa1434450:intron | 20.0% |
!! | AAGTTAGTAGTATTAATTAG+GGG | - | tig0027531:17843-17862 | Msa1434450:intron | 20.0% |
!!! | TATTCAAAATTTGCTAACTT+TGG | + | tig0027531:18227-18246 | None:intergenic | 20.0% |
!!! | TACAAGTACTATTTTATTGT+CGG | - | tig0027531:18402-18421 | Msa1434450:intron | 20.0% |
!! | CAAAAATTGAGTAATTTCAT+AGG | - | tig0027531:18909-18928 | Msa1434450:intron | 20.0% |
!!! | ATTGGAACTATATTTTTTCA+TGG | + | tig0027531:18950-18969 | None:intergenic | 20.0% |
!! | CCAATAAAAAGAATGAATAT+TGG | + | tig0027531:19326-19345 | None:intergenic | 20.0% |
!!! | CCAATATTCATTCTTTTTAT+TGG | - | tig0027531:19323-19342 | Msa1434450:intron | 20.0% |
!! | CGTGTAAAATAAAAAACATA+GGG | + | tig0027531:19504-19523 | None:intergenic | 20.0% |
!! | TCGTGTAAAATAAAAAACAT+AGG | + | tig0027531:19505-19524 | None:intergenic | 20.0% |
!! | TAGCATTTACTGTTATTAAT+TGG | + | tig0027531:19577-19596 | None:intergenic | 20.0% |
!! | AAATCAAATTCAATATCTTG+AGG | + | tig0027531:19730-19749 | None:intergenic | 20.0% |
!! | AATAAGAGTTTCAATAAAAC+TGG | - | tig0027531:19903-19922 | Msa1434450:intron | 20.0% |
!! | ATAAGAGTTTCAATAAAACT+GGG | - | tig0027531:19904-19923 | Msa1434450:intron | 20.0% |
!! | ACTTCTAAATATCTTGATAA+AGG | + | tig0027531:20795-20814 | None:intergenic | 20.0% |
!!! | TAGAAGTTTTGTTTTACTAA+AGG | - | tig0027531:20808-20827 | Msa1434450:intron | 20.0% |
!! | TACTCAAATTGTATTATTCA+GGG | + | tig0027531:21000-21019 | None:intergenic | 20.0% |
!! | TTACTCAAATTGTATTATTC+AGG | + | tig0027531:21001-21020 | None:intergenic | 20.0% |
!! | AATGTAAAGTTCTTTCTTTA+GGG | + | tig0027531:21063-21082 | None:intergenic | 20.0% |
!! | AAATGTAAAGTTCTTTCTTT+AGG | + | tig0027531:21064-21083 | None:intergenic | 20.0% |
!! | AAAGTAGAAACAAACAAAAA+CGG | + | tig0027531:21292-21311 | None:intergenic | 20.0% |
!!! | GATATATAATTTGTTTCGAT+TGG | + | tig0027531:21908-21927 | None:intergenic | 20.0% |
!!! | TAGTAAAGACCAAATTTTTT+TGG | + | tig0027531:22005-22024 | None:intergenic | 20.0% |
!!! | AATAGTTGATGTTTAGATTT+AGG | + | tig0027531:22094-22113 | None:intergenic | 20.0% |
!! | TTGAGAATCATATTAATGAA+AGG | - | tig0027531:22829-22848 | Msa1434450:intron | 20.0% |
!! | TGAGAATCATATTAATGAAA+GGG | - | tig0027531:22830-22849 | Msa1434450:intron | 20.0% |
!! | GAATATTCTCTTGATAAAAA+AGG | + | tig0027531:23004-23023 | None:intergenic | 20.0% |
!! | TTCAAATATTCATCCTTAAT+TGG | + | tig0027531:23255-23274 | None:intergenic | 20.0% |
!! | ATATAAATCATAATCATACC+CGG | + | tig0027531:23455-23474 | None:intergenic | 20.0% |
!! | TATAACGATTAGTTGATGTT+TGG | - | tig0027531:15169-15188 | Msa1434450:intron | 25.0% |
!! | TAATTTGTACGTGTCTAATA+TGG | - | tig0027531:15753-15772 | Msa1434450:intron | 25.0% |
!!! | CATCTTTTGATCATTTTTAG+AGG | + | tig0027531:15780-15799 | None:intergenic | 25.0% |
! | AAATAGAGAGATCAATAATG+TGG | + | tig0027531:15996-16015 | None:intergenic | 25.0% |
! | GATTTAATTGGTATACCTTA+TGG | - | tig0027531:16081-16100 | Msa1434450:CDS | 25.0% |
! | GGAAAGAAAGAAAAATTATG+AGG | - | tig0027531:16613-16632 | Msa1434450:intron | 25.0% |
! | ATTCTTTCACATATGGTAAA+TGG | + | tig0027531:16680-16699 | None:intergenic | 25.0% |
!! | ATTTTATTGTCAAAATGAGG+AGG | - | tig0027531:16868-16887 | Msa1434450:intron | 25.0% |
! | AATCCAAAATCAAATTGAGT+AGG | + | tig0027531:17291-17310 | None:intergenic | 25.0% |
!!! | GCAATTATTTTGATTATCCT+TGG | + | tig0027531:17639-17658 | None:intergenic | 25.0% |
! | AAATGTAAAAAATGCAAAGG+GGG | + | tig0027531:17715-17734 | None:intergenic | 25.0% |
! | GAAATGTAAAAAATGCAAAG+GGG | + | tig0027531:17716-17735 | None:intergenic | 25.0% |
! | ATGCATCTAGTAATTTGAAA+AGG | - | tig0027531:17888-17907 | Msa1434450:intron | 25.0% |
! | TGCATCTAGTAATTTGAAAA+GGG | - | tig0027531:17889-17908 | Msa1434450:intron | 25.0% |
! | TTGAAAAGGGATTTACATTT+AGG | - | tig0027531:17902-17921 | Msa1434450:intron | 25.0% |
! | TGAAAAGGGATTTACATTTA+GGG | - | tig0027531:17903-17922 | Msa1434450:intron | 25.0% |
! | TCAAATGAGTGTTTAGATAT+AGG | - | tig0027531:17938-17957 | Msa1434450:intron | 25.0% |
! | CAAATGAGTGTTTAGATATA+GGG | - | tig0027531:17939-17958 | Msa1434450:intron | 25.0% |
!! | ATGAATTGATGATACTATGA+GGG | - | tig0027531:18548-18567 | Msa1434450:intron | 25.0% |
!! | AAAATTTTATGGTGAAGTCA+TGG | + | tig0027531:18663-18682 | None:intergenic | 25.0% |
! | TTGATTGTCATTATAGCTAT+CGG | - | tig0027531:18699-18718 | Msa1434450:intron | 25.0% |
! | ACTAGAAAACAAATATTCCT+TGG | + | tig0027531:18776-18795 | None:intergenic | 25.0% |
! | GAATTTCTTTCTATATCACT+TGG | + | tig0027531:18807-18826 | None:intergenic | 25.0% |
! | TAATTTCATAGGAGAGTTAT+TGG | - | tig0027531:18920-18939 | Msa1434450:intron | 25.0% |
! | ATCTTTACAACTATTATGCA+AGG | - | tig0027531:19123-19142 | Msa1434450:intron | 25.0% |
! | TTGATTTCCATTCATGAAAA+AGG | - | tig0027531:19743-19762 | Msa1434450:intron | 25.0% |
! | TTCTTTGCTTGAAAATTTGT+CGG | + | tig0027531:20607-20626 | None:intergenic | 25.0% |
! | AGATCATCAATTCAAAACAT+CGG | - | tig0027531:20960-20979 | Msa1434450:intron | 25.0% |
! | TAATTGAACGAGTAGAAAAT+GGG | + | tig0027531:21101-21120 | None:intergenic | 25.0% |
! | GTAGTAGTAAATAACTGTAA+TGG | + | tig0027531:21133-21152 | None:intergenic | 25.0% |
! | TATGCGTTGTATTAAATAGA+AGG | - | tig0027531:21399-21418 | Msa1434450:intron | 25.0% |
!!! | CTTTCTTCATGTTATTTTGA+CGG | + | tig0027531:21434-21453 | None:intergenic | 25.0% |
! | TGCAAAGAGTAAATAAAAGA+GGG | + | tig0027531:21484-21503 | None:intergenic | 25.0% |
! | TTGCAAAGAGTAAATAAAAG+AGG | + | tig0027531:21485-21504 | None:intergenic | 25.0% |
! | AGGAGAAGAAATATATAGAA+TGG | + | tig0027531:21520-21539 | None:intergenic | 25.0% |
! | AATAATTAGAAGGAGTTGTT+TGG | + | tig0027531:21805-21824 | None:intergenic | 25.0% |
!!! | ATTTGGTTTTTTTCCTTGTT+GGG | - | tig0027531:21929-21948 | Msa1434450:intron | 25.0% |
! | AATGGCAAACCAAAAAAATT+TGG | - | tig0027531:21993-22012 | Msa1434450:intron | 25.0% |
!! | AACTATTTGATCTTTTCCAA+TGG | - | tig0027531:22107-22126 | Msa1434450:intron | 25.0% |
! | TTTACATTGTCAAGCAAATA+TGG | + | tig0027531:22138-22157 | None:intergenic | 25.0% |
! | TTGCTTGACAATGTAAATTT+AGG | - | tig0027531:22141-22160 | Msa1434450:intron | 25.0% |
! | ATCAGAATATTAATACTCCA+TGG | - | tig0027531:22239-22258 | Msa1434450:intron | 25.0% |
!!! | GCTTACGACAAATATTTTTT+AGG | - | tig0027531:22327-22346 | Msa1434450:intron | 25.0% |
!!! | TACGACAAATATTTTTTAGG+TGG | - | tig0027531:22330-22349 | Msa1434450:intron | 25.0% |
! | GAATCTCCAATATTAATGAT+GGG | - | tig0027531:22685-22704 | Msa1434450:intron | 25.0% |
! | TCATTAATATGATTCTCAAC+CGG | + | tig0027531:22828-22847 | None:intergenic | 25.0% |
! | TTATCAAGAGAATATTCAAG+AGG | - | tig0027531:23007-23026 | Msa1434450:intron | 25.0% |
! | GTGCTAAATAATTCCAATTA+AGG | - | tig0027531:23239-23258 | Msa1434450:CDS | 25.0% |
! | AAAAATTGTTCAAACTAGCT+AGG | + | tig0027531:23295-23314 | None:intergenic | 25.0% |
! | AAGAATTTACGAACGTTAAA+AGG | + | tig0027531:23648-23667 | None:intergenic | 25.0% |
! | TTTAACGTTCGTAAATTCTT+TGG | - | tig0027531:23648-23667 | Msa1434450:CDS | 25.0% |
CACTTGATCAAAAAGATCAT+TGG | + | tig0027531:14822-14841 | None:intergenic | 30.0% | |
TGACACCAAAATTAAATTGC+GGG | + | tig0027531:14892-14911 | None:intergenic | 30.0% | |
GTGACACCAAAATTAAATTG+CGG | + | tig0027531:14893-14912 | None:intergenic | 30.0% | |
TGATCATCAGTAAAAAGGAA+TGG | + | tig0027531:14998-15017 | None:intergenic | 30.0% | |
! | GAAGTTGATCATCAGTAAAA+AGG | + | tig0027531:15003-15022 | None:intergenic | 30.0% |
TTTACTGATGATCAACTTCA+AGG | - | tig0027531:15004-15023 | Msa1434450:intron | 30.0% | |
!!! | TTAGTTGATGTTTGGTTTTC+AGG | - | tig0027531:15177-15196 | Msa1434450:intron | 30.0% |
!!! | GTTCCCAAATCATTTTGATT+AGG | - | tig0027531:15670-15689 | Msa1434450:CDS | 30.0% |
CTAATATAGATCAAGTCCAA+TGG | + | tig0027531:15937-15956 | None:intergenic | 30.0% | |
! | ACTATATACGCACAATCTTT+TGG | - | tig0027531:16271-16290 | Msa1434450:intron | 30.0% |
ATGCTGATAACTCAATTGTA+AGG | + | tig0027531:16540-16559 | None:intergenic | 30.0% | |
TGTTAGCTCATTTCAACTAT+AGG | + | tig0027531:16591-16610 | None:intergenic | 30.0% | |
!! | AAGAATTTAGTTTGCGTGTT+AGG | - | tig0027531:16694-16713 | Msa1434450:intron | 30.0% |
!!! | TTGGTTTGTTAATGCACTTT+TGG | - | tig0027531:16726-16745 | Msa1434450:intron | 30.0% |
!! | GTGTATTGATAGCATGTTTT+CGG | - | tig0027531:16763-16782 | Msa1434450:intron | 30.0% |
!! | TTGCCTACTCAATTTGATTT+TGG | - | tig0027531:17285-17304 | Msa1434450:intron | 30.0% |
TCATTGCTGATAAAGATTTG+TGG | + | tig0027531:17616-17635 | None:intergenic | 30.0% | |
AATGTAAAAAATGCAAAGGG+GGG | + | tig0027531:17714-17733 | None:intergenic | 30.0% | |
CATACAAACAAAGGACAATT+TGG | + | tig0027531:17791-17810 | None:intergenic | 30.0% | |
! | TATTAATTAGGGGTGTGTTT+AGG | - | tig0027531:17853-17872 | Msa1434450:intron | 30.0% |
!! | AGTCATAAAAGCATTCAGTA+CGG | + | tig0027531:18056-18075 | None:intergenic | 30.0% |
! | TATGATTCTAGTTGTTAGAC+AGG | - | tig0027531:18134-18153 | Msa1434450:intron | 30.0% |
! | ATGATTCTAGTTGTTAGACA+GGG | - | tig0027531:18135-18154 | Msa1434450:intron | 30.0% |
TTGGATTTACAATGACAAAC+TGG | - | tig0027531:18158-18177 | Msa1434450:intron | 30.0% | |
TAATTTAAAGGGAGCTTCTA+TGG | - | tig0027531:18250-18269 | Msa1434450:intron | 30.0% | |
TCTTAAGTGTTACACTTTGT+GGG | - | tig0027531:18467-18486 | Msa1434450:intron | 30.0% | |
! | GATGAATTGATGATACTATG+AGG | - | tig0027531:18547-18566 | Msa1434450:intron | 30.0% |
! | ATGATGGAACTATTTAGAGT+GGG | + | tig0027531:18840-18859 | None:intergenic | 30.0% |
ACTCTAAATAGTTCCATCAT+GGG | - | tig0027531:18840-18859 | Msa1434450:intron | 30.0% | |
TTGATATGAAGAAGAAGACA+TGG | - | tig0027531:19003-19022 | Msa1434450:intron | 30.0% | |
!!! | ATGTTCTTTTCAAGTATGAG+CGG | - | tig0027531:19069-19088 | Msa1434450:intron | 30.0% |
AAAAAGATCGCAGTTGTTTA+TGG | - | tig0027531:19163-19182 | Msa1434450:intron | 30.0% | |
TTCCTAGAGTCTATAAAGAA+AGG | - | tig0027531:19443-19462 | Msa1434450:intron | 30.0% | |
TTCCTTTCTTTATAGACTCT+AGG | + | tig0027531:19448-19467 | None:intergenic | 30.0% | |
!! | TCATGTTCCTTTTTCATGAA+TGG | + | tig0027531:19753-19772 | None:intergenic | 30.0% |
GGGTATTTCAAAATAAACAG+CGG | - | tig0027531:19924-19943 | Msa1434450:intron | 30.0% | |
GGTATTTCAAAATAAACAGC+GGG | - | tig0027531:19925-19944 | Msa1434450:intron | 30.0% | |
!!! | TGCTTTATTTTCCAACTCTA+GGG | + | tig0027531:20022-20041 | None:intergenic | 30.0% |
AGAGATAATGCAACCAAATT+CGG | - | tig0027531:20059-20078 | Msa1434450:intron | 30.0% | |
ACATCAACTTAAACAAGACA+AGG | - | tig0027531:20207-20226 | Msa1434450:intron | 30.0% | |
! | ACAAGGTAATGACAAAGTTT+TGG | - | tig0027531:20224-20243 | Msa1434450:intron | 30.0% |
AACTAGCAATTTCTCAAGTT+TGG | - | tig0027531:20935-20954 | Msa1434450:intron | 30.0% | |
GTAATTGAACGAGTAGAAAA+TGG | + | tig0027531:21102-21121 | None:intergenic | 30.0% | |
TACAACGCATACATATAGAA+GGG | + | tig0027531:21390-21409 | None:intergenic | 30.0% | |
ATACAACGCATACATATAGA+AGG | + | tig0027531:21391-21410 | None:intergenic | 30.0% | |
!!! | TGTTATTTTGACGGAAAATG+TGG | + | tig0027531:21425-21444 | None:intergenic | 30.0% |
CTACAGTTACATATACAAAG+CGG | - | tig0027531:21621-21640 | Msa1434450:intron | 30.0% | |
!!! | GATTTGGTTTTTTTCCTTGT+TGG | - | tig0027531:21928-21947 | Msa1434450:intron | 30.0% |
!!! | TTTGGTTTTTTTCCTTGTTG+GGG | - | tig0027531:21930-21949 | Msa1434450:intron | 30.0% |
TTGCTTGAATGTGTGAATTT+AGG | + | tig0027531:22188-22207 | None:intergenic | 30.0% | |
CTAAACTTTGCATGTTTGAT+TGG | - | tig0027531:22305-22324 | Msa1434450:intron | 30.0% | |
! | GTTTCCTGTTTCTTGTTATA+GGG | + | tig0027531:22576-22595 | None:intergenic | 30.0% |
! | TGTTTCCTGTTTCTTGTTAT+AGG | + | tig0027531:22577-22596 | None:intergenic | 30.0% |
TCATCTTCCTCTAACAATAT+TGG | - | tig0027531:22663-22682 | Msa1434450:intron | 30.0% | |
GGAATCTCCAATATTAATGA+TGG | - | tig0027531:22684-22703 | Msa1434450:intron | 30.0% | |
CATTAATATGATTCTCAACC+GGG | + | tig0027531:22827-22846 | None:intergenic | 30.0% | |
TAGTGCTTAATGACATGATA+AGG | - | tig0027531:22853-22872 | Msa1434450:intron | 30.0% | |
! | ATCAACATTTTCTTGAGGTA+GGG | + | tig0027531:22925-22944 | None:intergenic | 30.0% |
TATGATAACATCATGACCTA+TGG | - | tig0027531:22954-22973 | Msa1434450:intron | 30.0% | |
! | TGACACCAAAATTAAGTTGT+GGG | + | tig0027531:23067-23086 | None:intergenic | 30.0% |
TTTACTGACGATCAATTTCA+AGG | - | tig0027531:23179-23198 | Msa1434450:intron | 30.0% | |
GTACATTCAAAGTTAATGCA+GGG | - | tig0027531:23622-23641 | Msa1434450:CDS | 30.0% | |
TGATCAAGTGAATGTTCAAG+AGG | - | tig0027531:14832-14851 | Msa1434450:CDS | 35.0% | |
! | AATTAAATTGCGGGTCTTGT+TGG | + | tig0027531:14883-14902 | None:intergenic | 35.0% |
!! | CAAGACCCGCAATTTAATTT+TGG | - | tig0027531:14884-14903 | Msa1434450:CDS | 35.0% |
AAAAGGAATGGAATATCAGC+AGG | + | tig0027531:14986-15005 | None:intergenic | 35.0% | |
ACCCAAAATTTCAAGCACAA+GGG | - | tig0027531:15060-15079 | Msa1434450:intron | 35.0% | |
! | ACCCTTGTGCTTGAAATTTT+GGG | + | tig0027531:15064-15083 | None:intergenic | 35.0% |
! | TACCCTTGTGCTTGAAATTT+TGG | + | tig0027531:15065-15084 | None:intergenic | 35.0% |
!!! | GATGTTTGGTTTTCAGGTTT+TGG | - | tig0027531:15183-15202 | Msa1434450:intron | 35.0% |
AAGGATTCACGAACGTTAAA+GGG | + | tig0027531:15276-15295 | None:intergenic | 35.0% | |
AAAGGATTCACGAACGTTAA+AGG | + | tig0027531:15277-15296 | None:intergenic | 35.0% | |
TTTAACGTTCGTGAATCCTT+TGG | - | tig0027531:15276-15295 | Msa1434450:intron | 35.0% | |
AAAAAAAGAGGATCCACCAT+TGG | - | tig0027531:15918-15937 | Msa1434450:CDS | 35.0% | |
ATATAGATCAAGTCCAATGG+TGG | + | tig0027531:15934-15953 | None:intergenic | 35.0% | |
TGTGAAGTGATAGGAAAAGA+GGG | + | tig0027531:15966-15985 | None:intergenic | 35.0% | |
GGTAAATAGTGTGAAGTGAT+AGG | + | tig0027531:15975-15994 | None:intergenic | 35.0% | |
!!! | GACACGCATTTTTTTCAAAC+TGG | - | tig0027531:16299-16318 | Msa1434450:intron | 35.0% |
GATGAAATGTTTGAGAGTGA+TGG | - | tig0027531:16458-16477 | Msa1434450:intron | 35.0% | |
ACAATTGAGTTATCAGCATG+CGG | - | tig0027531:16541-16560 | Msa1434450:intron | 35.0% | |
TAGTTGAAATGAGCTAACAC+CGG | - | tig0027531:16592-16611 | Msa1434450:intron | 35.0% | |
! | TGTTTTCGGCTTTCAAAATG+TGG | - | tig0027531:16777-16796 | Msa1434450:intron | 35.0% |
TCAAAATGAGGAGGAGATAA+TGG | - | tig0027531:16877-16896 | Msa1434450:intron | 35.0% | |
!!! | GCGCGTTTTTGAAACAATTT+TGG | - | tig0027531:16994-17013 | Msa1434450:intron | 35.0% |
TTACTGAACTCAATCACTTG+CGG | - | tig0027531:17065-17084 | Msa1434450:intron | 35.0% | |
TTGAAGTCTATCTTGAACAG+AGG | - | tig0027531:17109-17128 | Msa1434450:intron | 35.0% | |
TCTTCATCGTTGTTGTATGA+AGG | + | tig0027531:17169-17188 | None:intergenic | 35.0% | |
! | CTACTTCAAGAGCATATTCA+AGG | - | tig0027531:17509-17528 | Msa1434450:intron | 35.0% |
ATCTTTATCAGCAATGACCA+AGG | - | tig0027531:17619-17638 | Msa1434450:intron | 35.0% | |
TGAGTGTTTAGATATAGGGA+CGG | - | tig0027531:17943-17962 | Msa1434450:intron | 35.0% | |
TAGTAATGCTTGCAACATCT+TGG | - | tig0027531:18376-18395 | Msa1434450:intron | 35.0% | |
GTCTTAAGTGTTACACTTTG+TGG | - | tig0027531:18466-18485 | Msa1434450:intron | 35.0% | |
CTTAAGTGTTACACTTTGTG+GGG | - | tig0027531:18468-18487 | Msa1434450:intron | 35.0% | |
TGTTACGCTTATAACAAGGT+AGG | - | tig0027531:18491-18510 | Msa1434450:intron | 35.0% | |
TGATGCCATTGTACAAACAA+TGG | - | tig0027531:18580-18599 | Msa1434450:intron | 35.0% | |
GATGCCATTGTACAAACAAT+GGG | - | tig0027531:18581-18600 | Msa1434450:intron | 35.0% | |
ATGCCATTGTACAAACAATG+GGG | - | tig0027531:18582-18601 | Msa1434450:intron | 35.0% | |
TCCATTAAAGAAGTTGACCA+AGG | - | tig0027531:18756-18775 | Msa1434450:intron | 35.0% | |
TCCTTGGTCAACTTCTTTAA+TGG | + | tig0027531:18760-18779 | None:intergenic | 35.0% | |
! | GAACTATTTAGAGTGGGATT+TGG | + | tig0027531:18834-18853 | None:intergenic | 35.0% |
! | CATGATGGAACTATTTAGAG+TGG | + | tig0027531:18841-18860 | None:intergenic | 35.0% |
CACTCTAAATAGTTCCATCA+TGG | - | tig0027531:18839-18858 | Msa1434450:intron | 35.0% | |
GGGTTTATGTCAGAAGAATT+TGG | - | tig0027531:18885-18904 | Msa1434450:intron | 35.0% | |
AGACATGGAACAGTATAAAG+AGG | - | tig0027531:19018-19037 | Msa1434450:intron | 35.0% | |
ATGGTTTGAGAAATTGCAAG+CGG | - | tig0027531:19182-19201 | Msa1434450:intron | 35.0% | |
ACATGGTGTTTGTGATCTAA+TGG | - | tig0027531:19226-19245 | Msa1434450:intron | 35.0% | |
! | TCACTTGAGTTTAAAGCAAG+TGG | - | tig0027531:19684-19703 | Msa1434450:intron | 35.0% |
! | TTGAGTTTAAAGCAAGTGGT+TGG | - | tig0027531:19688-19707 | Msa1434450:intron | 35.0% |
!! | TTTATTTTCCAACTCTAGGG+TGG | + | tig0027531:20019-20038 | None:intergenic | 35.0% |
!!! | CTGCTTTATTTTCCAACTCT+AGG | + | tig0027531:20023-20042 | None:intergenic | 35.0% |
! | ACTAGTTGATGCAAGAACAA+CGG | - | tig0027531:20432-20451 | Msa1434450:intron | 35.0% |
AAAATGACAGTCGTAGATGA+TGG | - | tig0027531:20627-20646 | Msa1434450:intron | 35.0% | |
! | ATACAGGTTTGGAATAAAGG+TGG | + | tig0027531:20690-20709 | None:intergenic | 35.0% |
! | GCTATACAGGTTTGGAATAA+AGG | + | tig0027531:20693-20712 | None:intergenic | 35.0% |
TTCCAAACCTGTATAGCAAA+CGG | - | tig0027531:20696-20715 | Msa1434450:intron | 35.0% | |
ACGTGTACTAACTTTAACCA+TGG | - | tig0027531:20906-20925 | Msa1434450:intron | 35.0% | |
TACTAACTTTAACCATGGTG+TGG | - | tig0027531:20911-20930 | Msa1434450:intron | 35.0% | |
!! | GTTCTTTCTTTAGGGTTTCT+TGG | + | tig0027531:21055-21074 | None:intergenic | 35.0% |
CTACTTTCCCTTTACTTCAT+TGG | - | tig0027531:21305-21324 | Msa1434450:intron | 35.0% | |
CACATCACCAATGAAGTAAA+GGG | + | tig0027531:21315-21334 | None:intergenic | 35.0% | |
ACACATCACCAATGAAGTAA+AGG | + | tig0027531:21316-21335 | None:intergenic | 35.0% | |
CTTACACTGAAGAAAATTGC+TGG | + | tig0027531:21595-21614 | None:intergenic | 35.0% | |
! | AGATCGATAGTTGATGTACT+GGG | + | tig0027531:21660-21679 | None:intergenic | 35.0% |
ATGCAGAAGATTCTGATTGT+TGG | + | tig0027531:21750-21769 | None:intergenic | 35.0% | |
AACAATCAGAATCTTCTGCA+TGG | - | tig0027531:21749-21768 | Msa1434450:intron | 35.0% | |
AAACCATTGAAGAGAGAAGA+GGG | + | tig0027531:21782-21801 | None:intergenic | 35.0% | |
!!! | TTGGTTTTTTTCCTTGTTGG+GGG | - | tig0027531:21931-21950 | Msa1434450:intron | 35.0% |
TCATTACACTGTATGAACCA+TGG | + | tig0027531:22259-22278 | None:intergenic | 35.0% | |
!! | TATAGATGGCTTTGAGAATG+CGG | + | tig0027531:22416-22435 | None:intergenic | 35.0% |
TCAAAGCCATCTATAACTCA+GGG | - | tig0027531:22421-22440 | Msa1434450:intron | 35.0% | |
TTCTTAATCTCATCTCTACG+TGG | + | tig0027531:22456-22475 | None:intergenic | 35.0% | |
GATGAGATTAAGAAGATACG+TGG | - | tig0027531:22462-22481 | Msa1434450:intron | 35.0% | |
CGTGGACAATTAGAAGAATT+TGG | - | tig0027531:22480-22499 | Msa1434450:intron | 35.0% | |
TTAGAAGAATTTGGACCGAT+TGG | - | tig0027531:22489-22508 | Msa1434450:intron | 35.0% | |
TTGAAACCAATAAAAGACGC+TGG | + | tig0027531:22520-22539 | None:intergenic | 35.0% | |
! | CTTGTTATAGGGTACTTTGT+TGG | + | tig0027531:22565-22584 | None:intergenic | 35.0% |
AGTACCCTATAACAAGAAAC+AGG | - | tig0027531:22569-22588 | Msa1434450:intron | 35.0% | |
GGAGATTCCAATATTGTTAG+AGG | + | tig0027531:22673-22692 | None:intergenic | 35.0% | |
! | CTCCAATATTAATGATGGGA+CGG | - | tig0027531:22689-22708 | Msa1434450:intron | 35.0% |
! | GATCAACATTTTCTTGAGGT+AGG | + | tig0027531:22926-22945 | None:intergenic | 35.0% |
! | AGCAGATCAACATTTTCTTG+AGG | + | tig0027531:22930-22949 | None:intergenic | 35.0% |
AACATCATGACCTATGGAAA+TGG | - | tig0027531:22960-22979 | Msa1434450:intron | 35.0% | |
! | AATTAAGTTGTGGGTCTTGT+TGG | + | tig0027531:23058-23077 | None:intergenic | 35.0% |
! | CAAGACCCACAACTTAATTT+TGG | - | tig0027531:23059-23078 | Msa1434450:intron | 35.0% |
! | GTGACACCAAAATTAAGTTG+TGG | + | tig0027531:23068-23087 | None:intergenic | 35.0% |
AAAGAGGAATGGAACATCAT+GGG | + | tig0027531:23162-23181 | None:intergenic | 35.0% | |
TAAAGAGGAATGGAACATCA+TGG | + | tig0027531:23163-23182 | None:intergenic | 35.0% | |
GAAATTGATCGTCAGTAAAG+AGG | + | tig0027531:23178-23197 | None:intergenic | 35.0% | |
! | TACCCGGTGCTTTATATTTT+GGG | + | tig0027531:23439-23458 | None:intergenic | 35.0% |
! | ATACCCGGTGCTTTATATTT+TGG | + | tig0027531:23440-23459 | None:intergenic | 35.0% |
AATTGTTGTGTGTGTTTCTC+AGG | - | tig0027531:23549-23568 | Msa1434450:CDS | 35.0% | |
TGTAGGGTGATTACTATCAA+CGG | - | tig0027531:23600-23619 | Msa1434450:CDS | 35.0% | |
GGTACATTCAAAGTTAATGC+AGG | - | tig0027531:23621-23640 | Msa1434450:CDS | 35.0% | |
GTGCATGTGCATCATATTCA+TGG | + | tig0027531:14861-14880 | None:intergenic | 40.0% | |
CACCCAAAATTTCAAGCACA+AGG | - | tig0027531:15059-15078 | Msa1434450:intron | 40.0% | |
!!! | TTGGTTTTCAGGTTTTGGTG+AGG | - | tig0027531:15188-15207 | Msa1434450:intron | 40.0% |
GTTAACCTCGATTACTTCGT+TGG | + | tig0027531:15247-15266 | None:intergenic | 40.0% | |
AAGTAATCGAGGTTAACGCA+GGG | - | tig0027531:15250-15269 | Msa1434450:intron | 40.0% | |
CAGAACTGCTCTATTACCAA+AGG | + | tig0027531:15295-15314 | None:intergenic | 40.0% | |
TGAGTGAACAACAGTTGCTT+AGG | - | tig0027531:15494-15513 | Msa1434450:CDS | 40.0% | |
TGAAGTGATAGGAAAAGAGG+GGG | + | tig0027531:15964-15983 | None:intergenic | 40.0% | |
GTGAAGTGATAGGAAAAGAG+GGG | + | tig0027531:15965-15984 | None:intergenic | 40.0% | |
GTGTGAAGTGATAGGAAAAG+AGG | + | tig0027531:15967-15986 | None:intergenic | 40.0% | |
TTATCAGCATGCGGTTGAAT+TGG | - | tig0027531:16550-16569 | Msa1434450:intron | 40.0% | |
GCGTGTTAGGATTAAGAGTT+TGG | - | tig0027531:16707-16726 | Msa1434450:intron | 40.0% | |
TTCGGCTTTCAAAATGTGGA+CGG | - | tig0027531:16781-16800 | Msa1434450:intron | 40.0% | |
!! | ATGAGGAGGAGATAATGGAA+CGG | - | tig0027531:16882-16901 | Msa1434450:intron | 40.0% |
TGTTTAGATATAGGGACGGA+GGG | - | tig0027531:17947-17966 | Msa1434450:intron | 40.0% | |
AAGTAAACTCTTGATCCGAG+TGG | - | tig0027531:17989-18008 | Msa1434450:intron | 40.0% | |
! | TTCTAGTTGTTAGACAGGGT+TGG | - | tig0027531:18139-18158 | Msa1434450:intron | 40.0% |
! | ATTGATGATACTATGAGGGC+TGG | - | tig0027531:18552-18571 | Msa1434450:intron | 40.0% |
ACACCCCATTGTTTGTACAA+TGG | + | tig0027531:18588-18607 | None:intergenic | 40.0% | |
! | ATTTAGAGTGGGATTTGGCT+AGG | + | tig0027531:18829-18848 | None:intergenic | 40.0% |
CAAGTGTACCATATGCGATA+GGG | - | tig0027531:18865-18884 | Msa1434450:intron | 40.0% | |
GACATAAACCCTATCGCATA+TGG | + | tig0027531:18876-18895 | None:intergenic | 40.0% | |
GAAGTCATGAAGTGATGCTA+AGG | - | tig0027531:19046-19065 | Msa1434450:intron | 40.0% | |
TGGTGTTTGTGATCTAATGG+CGG | - | tig0027531:19229-19248 | Msa1434450:intron | 40.0% | |
TGTTAGGGATGTGGAAGTTT+GGG | + | tig0027531:19281-19300 | None:intergenic | 40.0% | |
GTGAGACATAAAACTGCTTC+AGG | + | tig0027531:19419-19438 | None:intergenic | 40.0% | |
!! | TGACATGCAATTTGATAGCG+CGG | + | tig0027531:20145-20164 | None:intergenic | 40.0% |
GTTTGCACTCAGCTTTACAA+TGG | + | tig0027531:20173-20192 | None:intergenic | 40.0% | |
! | CTCTGATGGTACTTTTGTTC+TGG | + | tig0027531:20250-20269 | None:intergenic | 40.0% |
ATCTGTGTTCATGACTCTGA+TGG | + | tig0027531:20264-20283 | None:intergenic | 40.0% | |
! | CTAGTTGATGCAAGAACAAC+GGG | - | tig0027531:20433-20452 | Msa1434450:intron | 40.0% |
! | TATGGTCACTGATTGACAGT+TGG | + | tig0027531:20469-20488 | None:intergenic | 40.0% |
GTCAATCAGTGACCATATTC+CGG | - | tig0027531:20472-20491 | Msa1434450:intron | 40.0% | |
TCAATCAGTGACCATATTCC+GGG | - | tig0027531:20473-20492 | Msa1434450:intron | 40.0% | |
! | CAACTGTAATGTGGAGCATT+TGG | + | tig0027531:20563-20582 | None:intergenic | 40.0% |
AACGTCTGACAACTGTAATG+TGG | + | tig0027531:20572-20591 | None:intergenic | 40.0% | |
TTGGAATAAAGGTGGCCTAT+GGG | + | tig0027531:20682-20701 | None:intergenic | 40.0% | |
! | TTTGGAATAAAGGTGGCCTA+TGG | + | tig0027531:20683-20702 | None:intergenic | 40.0% |
AATTGCTAGTTACCACACCA+TGG | + | tig0027531:20926-20945 | None:intergenic | 40.0% | |
TGAACGAGTAGAAAATGGGA+GGG | + | tig0027531:21097-21116 | None:intergenic | 40.0% | |
TTGAACGAGTAGAAAATGGG+AGG | + | tig0027531:21098-21117 | None:intergenic | 40.0% | |
TTTCACGCAAGTATGATCGA+TGG | + | tig0027531:21176-21195 | None:intergenic | 40.0% | |
GCAAGTAAAGCTGACAAACA+TGG | - | tig0027531:21241-21260 | Msa1434450:intron | 40.0% | |
! | CAGATCGATAGTTGATGTAC+TGG | + | tig0027531:21661-21680 | None:intergenic | 40.0% |
CATCAACTATCGATCTGTGA+TGG | - | tig0027531:21664-21683 | Msa1434450:intron | 40.0% | |
GACCAATGTACTTTCTTCGA+GGG | + | tig0027531:21692-21711 | None:intergenic | 40.0% | |
TGACCAATGTACTTTCTTCG+AGG | + | tig0027531:21693-21712 | None:intergenic | 40.0% | |
! | AGAAAGTACATTGGTCAGAC+AGG | - | tig0027531:21696-21715 | Msa1434450:intron | 40.0% |
AACCATTGAAGAGAGAAGAG+GGG | + | tig0027531:21781-21800 | None:intergenic | 40.0% | |
GAAACCATTGAAGAGAGAAG+AGG | + | tig0027531:21783-21802 | None:intergenic | 40.0% | |
AGCAAATATGGTCAGACCAT+TGG | + | tig0027531:22126-22145 | None:intergenic | 40.0% | |
GATGATGAAGAAAGAACTCC+TGG | - | tig0027531:22354-22373 | Msa1434450:intron | 40.0% | |
CTCAAAGCCATCTATAACTC+AGG | - | tig0027531:22420-22439 | Msa1434450:intron | 40.0% | |
! | GTGATTCCAGCGTCTTTTAT+TGG | - | tig0027531:22511-22530 | Msa1434450:intron | 40.0% |
! | GATGATGAAGATGAGTTGAG+TGG | + | tig0027531:22648-22667 | None:intergenic | 40.0% |
CACCGTCCCATCATTAATAT+TGG | + | tig0027531:22694-22713 | None:intergenic | 40.0% | |
! | TATTAATGATGGGACGGTGA+TGG | - | tig0027531:22695-22714 | Msa1434450:intron | 40.0% |
AGAGAGATTGCAGGTGAATT+AGG | + | tig0027531:22723-22742 | None:intergenic | 40.0% | |
! | GATAAGTACCACCTTGGTTT+TGG | + | tig0027531:22749-22768 | None:intergenic | 40.0% |
TAATGACATGATAAGGCCAG+AGG | - | tig0027531:22860-22879 | Msa1434450:intron | 40.0% | |
AATGACATGATAAGGCCAGA+GGG | - | tig0027531:22861-22880 | Msa1434450:intron | 40.0% | |
GAGAAGTAATTAAACCCCTC+TGG | + | tig0027531:22879-22898 | None:intergenic | 40.0% | |
! | GGTAGGGATTGACTCATATT+TGG | + | tig0027531:22909-22928 | None:intergenic | 40.0% |
TGAGCAGTTTCCATTTCCAT+AGG | + | tig0027531:22973-22992 | None:intergenic | 40.0% | |
AAGAGGAATGGAACATCATG+GGG | + | tig0027531:23161-23180 | None:intergenic | 40.0% | |
TGATCGTCAGTAAAGAGGAA+TGG | + | tig0027531:23173-23192 | None:intergenic | 40.0% | |
!! | TTTTCAGGAAGTGACTAGCT+AGG | + | tig0027531:23354-23373 | None:intergenic | 40.0% |
GCTAGTCACTTCCTGAAAAA+CGG | - | tig0027531:23355-23374 | Msa1434450:intron | 40.0% | |
!! | GTCTAAACCTTCCGTTTTTC+AGG | + | tig0027531:23369-23388 | None:intergenic | 40.0% |
! | ACCCGGTGCTTTATATTTTG+GGG | + | tig0027531:23438-23457 | None:intergenic | 40.0% |
! | TGTGTGTGTTTCTCAGGTTT+TGG | - | tig0027531:23555-23574 | Msa1434450:CDS | 40.0% |
ACGATGGTACAGCAAAATGT+AGG | - | tig0027531:23583-23602 | Msa1434450:CDS | 40.0% | |
CGATGGTACAGCAAAATGTA+GGG | - | tig0027531:23584-23603 | Msa1434450:CDS | 40.0% | |
GTTCGTAAATTCTTTGGCGA+TGG | - | tig0027531:23654-23673 | Msa1434450:CDS | 40.0% | |
TGCACATTGCACACGTCTAT+GGG | + | tig0027531:15106-15125 | None:intergenic | 45.0% | |
ATGCACATTGCACACGTCTA+TGG | + | tig0027531:15107-15126 | None:intergenic | 45.0% | |
ATAGACGTGTGCAATGTGCA+TGG | - | tig0027531:15106-15125 | Msa1434450:intron | 45.0% | |
!! | TCAGGTTTTGGTGAGGAAGA+TGG | - | tig0027531:15195-15214 | Msa1434450:intron | 45.0% |
TACTGCCAACGAAGTAATCG+AGG | - | tig0027531:15239-15258 | Msa1434450:intron | 45.0% | |
GAAGTAATCGAGGTTAACGC+AGG | - | tig0027531:15249-15268 | Msa1434450:intron | 45.0% | |
! | TCCATGGTAGAGTGAGTTGA+GGG | + | tig0027531:15364-15383 | None:intergenic | 45.0% |
CCACGTAATAATCAGCTCCA+TGG | + | tig0027531:15380-15399 | None:intergenic | 45.0% | |
CCATGGAGCTGATTATTACG+TGG | - | tig0027531:15377-15396 | Msa1434450:intron | 45.0% | |
TCGGCTTTCAAAATGTGGAC+GGG | - | tig0027531:16782-16801 | Msa1434450:intron | 45.0% | |
!! | AGGAGATAATGGAACGGCTA+GGG | - | tig0027531:16888-16907 | Msa1434450:intron | 45.0% |
TTGCAGTTGCTGAACTTCAG+AGG | - | tig0027531:17209-17228 | Msa1434450:intron | 45.0% | |
CTGAACTTCAGAGGAGGATA+CGG | - | tig0027531:17218-17237 | Msa1434450:intron | 45.0% | |
ACGTTGCTTCTTCGTGATGA+TGG | - | tig0027531:17247-17266 | Msa1434450:intron | 45.0% | |
CGTTGCTTCTTCGTGATGAT+GGG | - | tig0027531:17248-17267 | Msa1434450:intron | 45.0% | |
GCAAAGGGGGGTTACATTAA+GGG | + | tig0027531:17702-17721 | None:intergenic | 45.0% | |
TGCAAAGGGGGGTTACATTA+AGG | + | tig0027531:17703-17722 | None:intergenic | 45.0% | |
GTGTTTAGATATAGGGACGG+AGG | - | tig0027531:17946-17965 | Msa1434450:intron | 45.0% | |
! | GGGGTGTTACGCTTATAACA+AGG | - | tig0027531:18487-18506 | Msa1434450:intron | 45.0% |
CTATCGGATGCTACACTTAG+TGG | - | tig0027531:18715-18734 | Msa1434450:intron | 45.0% | |
CCTATCGCATATGGTACACT+TGG | + | tig0027531:18867-18886 | None:intergenic | 45.0% | |
CCAAGTGTACCATATGCGAT+AGG | - | tig0027531:18864-18883 | Msa1434450:intron | 45.0% | |
AATTGCAAGCGGATGTCAAG+AGG | - | tig0027531:19193-19212 | Msa1434450:intron | 45.0% | |
GTGTTAGGGATGTGGAAGTT+TGG | + | tig0027531:19282-19301 | None:intergenic | 45.0% | |
!! | GTCGTTTCTAGCTGGTGTTA+GGG | + | tig0027531:19296-19315 | None:intergenic | 45.0% |
!! | TGTCGTTTCTAGCTGGTGTT+AGG | + | tig0027531:19297-19316 | None:intergenic | 45.0% |
ACACCAGCTAGAAACGACAA+TGG | - | tig0027531:19298-19317 | Msa1434450:intron | 45.0% | |
AGTCTTGATCCTATGCATGC+TGG | - | tig0027531:19349-19368 | Msa1434450:intron | 45.0% | |
GTCTTGATCCTATGCATGCT+GGG | - | tig0027531:19350-19369 | Msa1434450:intron | 45.0% | |
! | AAGAGCATGAGCAACCTCAT+TGG | - | tig0027531:19975-19994 | Msa1434450:intron | 45.0% |
!! | ACTCTAGGGTGGAGTTTGTT+AGG | + | tig0027531:20008-20027 | None:intergenic | 45.0% |
AACAAACTCCACCCTAGAGT+TGG | - | tig0027531:20008-20027 | Msa1434450:intron | 45.0% | |
AGGAACGACACATCCGAATT+TGG | + | tig0027531:20075-20094 | None:intergenic | 45.0% | |
GTCGTTCCTGTCAGAAAGAA+AGG | - | tig0027531:20086-20105 | Msa1434450:intron | 45.0% | |
CTGATGCCTTTCTTTCTGAC+AGG | + | tig0027531:20095-20114 | None:intergenic | 45.0% | |
!! | TGATAGCGCGGCTTTTGAAA+CGG | + | tig0027531:20133-20152 | None:intergenic | 45.0% |
CACAGATGCCAATACCTCTT+CGG | - | tig0027531:20277-20296 | Msa1434450:intron | 45.0% | |
CATTTATATCTCCCCGCCAT+AGG | - | tig0027531:20333-20352 | Msa1434450:intron | 45.0% | |
TGTCACAGAAACCAGCACTA+TGG | + | tig0027531:20511-20530 | None:intergenic | 45.0% | |
CTTCCCAAACTCGAAGATTG+CGG | - | tig0027531:20532-20551 | Msa1434450:intron | 45.0% | |
! | ACACCGCAATCTTCGAGTTT+GGG | + | tig0027531:20538-20557 | None:intergenic | 45.0% |
! | AACACCGCAATCTTCGAGTT+TGG | + | tig0027531:20539-20558 | None:intergenic | 45.0% |
CGTGTTGAATAGAACCCCAT+AGG | - | tig0027531:20664-20683 | Msa1434450:intron | 45.0% | |
TGGAATAAAGGTGGCCTATG+GGG | + | tig0027531:20681-20700 | None:intergenic | 45.0% | |
!! | GTCCGTTTGCTATACAGGTT+TGG | + | tig0027531:20701-20720 | None:intergenic | 45.0% |
!! | CTCTTGTCCGTTTGCTATAC+AGG | + | tig0027531:20706-20725 | None:intergenic | 45.0% |
!! | GGTTTCTTGGATTGACTCGA+GGG | + | tig0027531:21042-21061 | None:intergenic | 45.0% |
TCGATGGAAGAGAAGAGAAG+AGG | + | tig0027531:21160-21179 | None:intergenic | 45.0% | |
GGATGAATCGATGGAAGAGA+AGG | + | tig0027531:21540-21559 | None:intergenic | 45.0% | |
!! | AGCAATGGTGGATGAATCGA+TGG | + | tig0027531:21549-21568 | None:intergenic | 45.0% |
! | CTCCCTCGAAGAAAGTACAT+TGG | - | tig0027531:21687-21706 | Msa1434450:intron | 45.0% |
CGTTTATATGACCCCCAACA+AGG | + | tig0027531:21945-21964 | None:intergenic | 45.0% | |
AAGAAAGAACTCCTGGACCA+AGG | - | tig0027531:22361-22380 | Msa1434450:intron | 45.0% | |
! | TTGAGAATGCGGATTTGCTC+AGG | + | tig0027531:22405-22424 | None:intergenic | 45.0% |
CGTCATCCCTGAGTTATAGA+TGG | + | tig0027531:22430-22449 | None:intergenic | 45.0% | |
AAGACGCTGGAATCACCAAT+CGG | + | tig0027531:22507-22526 | None:intergenic | 45.0% | |
ATTTGTGGGAGAGAGCTATC+TGG | + | tig0027531:22615-22634 | None:intergenic | 45.0% | |
! | GATGAAGATGAGTTGAGTGG+TGG | + | tig0027531:22645-22664 | None:intergenic | 45.0% |
!!! | TTTTGGCTCAGAGAGATTGC+AGG | + | tig0027531:22732-22751 | None:intergenic | 45.0% |
ATCTCTCTGAGCCAAAACCA+AGG | - | tig0027531:22735-22754 | Msa1434450:intron | 45.0% | |
TGTGAGGATAAGTACCACCT+TGG | + | tig0027531:22755-22774 | None:intergenic | 45.0% | |
! | AAAGAGGAAAACGAGGGTGT+AGG | + | tig0027531:22804-22823 | None:intergenic | 45.0% |
ATGATTCTCAACCGGGAAAG+AGG | + | tig0027531:22820-22839 | None:intergenic | 45.0% | |
ATGACATGATAAGGCCAGAG+GGG | - | tig0027531:22862-22881 | Msa1434450:intron | 45.0% | |
ATGGGGTGCACTATTGTCAA+TGG | + | tig0027531:23144-23163 | None:intergenic | 45.0% | |
GTCACTTCCTGAAAAACGGA+AGG | - | tig0027531:23359-23378 | Msa1434450:intron | 45.0% | |
!! | CCGGTGCTTTATATTTTGGG+GGG | + | tig0027531:23436-23455 | None:intergenic | 45.0% |
CCCCCCAAAATATAAAGCAC+CGG | - | tig0027531:23433-23452 | Msa1434450:intron | 45.0% | |
!! | CCCGGTGCTTTATATTTTGG+GGG | + | tig0027531:23437-23456 | None:intergenic | 45.0% |
! | CCCCCAAAATATAAAGCACC+GGG | - | tig0027531:23434-23453 | Msa1434450:intron | 45.0% |
!! | GTGTTTCTCAGGTTTTGGTG+AGG | - | tig0027531:23560-23579 | Msa1434450:CDS | 45.0% |
!! | TAATAATAATAATAATTAGA+AGG | + | tig0027531:21815-21834 | None:intergenic | 5.0% |
TGATCTTGCTCCTCTACCTC+CGG | - | tig0027531:14943-14962 | Msa1434450:CDS | 50.0% | |
AGCAGGTGCACTCATGTCAA+TGG | + | tig0027531:14969-14988 | None:intergenic | 50.0% | |
GTTTGACTCCTTCTGTACCC+CGG | - | tig0027531:15314-15333 | Msa1434450:intron | 50.0% | |
! | CCATTCATCGGTTAGAACCG+GGG | + | tig0027531:15334-15353 | None:intergenic | 50.0% |
! | CCCATTCATCGGTTAGAACC+GGG | + | tig0027531:15335-15354 | None:intergenic | 50.0% |
! | CCCGGTTCTAACCGATGAAT+GGG | - | tig0027531:15332-15351 | Msa1434450:intron | 50.0% |
! | CCCCATTCATCGGTTAGAAC+CGG | + | tig0027531:15336-15355 | None:intergenic | 50.0% |
! | CCGGTTCTAACCGATGAATG+GGG | - | tig0027531:15333-15352 | Msa1434450:intron | 50.0% |
ACCCTCAACTCACTCTACCA+TGG | - | tig0027531:15360-15379 | Msa1434450:intron | 50.0% | |
CTCCATGGTAGAGTGAGTTG+AGG | + | tig0027531:15365-15384 | None:intergenic | 50.0% | |
!! | GAGGAGATAATGGAACGGCT+AGG | - | tig0027531:16887-16906 | Msa1434450:intron | 50.0% |
CAGTTGCTGAACTTCAGAGG+AGG | - | tig0027531:17212-17231 | Msa1434450:intron | 50.0% | |
AACTTCAGAGGAGGATACGG+AGG | - | tig0027531:17221-17240 | Msa1434450:intron | 50.0% | |
ACTTCAGAGGAGGATACGGA+GGG | - | tig0027531:17222-17241 | Msa1434450:intron | 50.0% | |
GGGTTACATTAAGGGACGGA+GGG | + | tig0027531:17694-17713 | None:intergenic | 50.0% | |
AGGGGGGTTACATTAAGGGA+CGG | + | tig0027531:17698-17717 | None:intergenic | 50.0% | |
TGGTACACTTGGACCCATGA+TGG | + | tig0027531:18856-18875 | None:intergenic | 50.0% | |
GGATGTCAAGAGGTCTGCAA+AGG | - | tig0027531:19203-19222 | Msa1434450:intron | 50.0% | |
CAAGAGGTCTGCAAAGGACA+TGG | - | tig0027531:19209-19228 | Msa1434450:intron | 50.0% | |
!! | AATGGCGGATGACATTTGCG+AGG | - | tig0027531:19244-19263 | Msa1434450:intron | 50.0% |
! | TCTAGCTGGTGTTAGGGATG+TGG | + | tig0027531:19290-19309 | None:intergenic | 50.0% |
TCATGATGCCCAGCATGCAT+AGG | + | tig0027531:19361-19380 | None:intergenic | 50.0% | |
TGTTAGGCGACAAGCCAATG+AGG | + | tig0027531:19992-20011 | None:intergenic | 50.0% | |
GTTGATGTGCGTGAAGCTCT+TGG | + | tig0027531:20195-20214 | None:intergenic | 50.0% | |
TGCCAATACCTCTTCGGTTG+AGG | - | tig0027531:20283-20302 | Msa1434450:intron | 50.0% | |
GCCAATACCTCTTCGGTTGA+GGG | - | tig0027531:20284-20303 | Msa1434450:intron | 50.0% | |
! | TCCCTCAACCGAAGAGGTAT+TGG | + | tig0027531:20288-20307 | None:intergenic | 50.0% |
AATACCTCTTCGGTTGAGGG+AGG | - | tig0027531:20287-20306 | Msa1434450:intron | 50.0% | |
TTATATCTCCCCGCCATAGG+AGG | - | tig0027531:20336-20355 | Msa1434450:intron | 50.0% | |
CCTCACCTAATGGTCGAAAG+TGG | + | tig0027531:20365-20384 | None:intergenic | 50.0% | |
CCACTTTCGACCATTAGGTG+AGG | - | tig0027531:20362-20381 | Msa1434450:intron | 50.0% | |
! | AGTCGTCATTGCCACTTGAG+GGG | + | tig0027531:20405-20424 | None:intergenic | 50.0% |
! | CAGTCGTCATTGCCACTTGA+GGG | + | tig0027531:20406-20425 | None:intergenic | 50.0% |
TCATTCCACCACCATAGTGC+TGG | - | tig0027531:20497-20516 | Msa1434450:intron | 50.0% | |
AGAAACCAGCACTATGGTGG+TGG | + | tig0027531:20505-20524 | None:intergenic | 50.0% | |
CACAGAAACCAGCACTATGG+TGG | + | tig0027531:20508-20527 | None:intergenic | 50.0% | |
TTCATGATCTGATGCGCAGC+TGG | - | tig0027531:20746-20765 | Msa1434450:intron | 50.0% | |
!! | GGGTTTCTTGGATTGACTCG+AGG | + | tig0027531:21043-21062 | None:intergenic | 50.0% |
AGTAGAAAATGGGAGGGTGG+AGG | + | tig0027531:21091-21110 | None:intergenic | 50.0% | |
ACGAGTAGAAAATGGGAGGG+TGG | + | tig0027531:21094-21113 | None:intergenic | 50.0% | |
CTCCCCTCTTCTCTCTTCAA+TGG | - | tig0027531:21776-21795 | Msa1434450:intron | 50.0% | |
! | TTTGGGATCCATCTTGGCCT+TGG | + | tig0027531:22381-22400 | None:intergenic | 50.0% |
!! | TCAGGCTTTGGGATCCATCT+TGG | + | tig0027531:22387-22406 | None:intergenic | 50.0% |
! | TGCGGATTTGCTCAGGCTTT+GGG | + | tig0027531:22398-22417 | None:intergenic | 50.0% |
! | ATGCGGATTTGCTCAGGCTT+TGG | + | tig0027531:22399-22418 | None:intergenic | 50.0% |
! | GTGGTGGTGTGGTGATTTGT+GGG | + | tig0027531:22629-22648 | None:intergenic | 50.0% |
! | AGTGGTGGTGTGGTGATTTG+TGG | + | tig0027531:22630-22649 | None:intergenic | 50.0% |
! | AGATGAGTTGAGTGGTGGTG+TGG | + | tig0027531:22640-22659 | None:intergenic | 50.0% |
TCTCTGAGCCAAAACCAAGG+TGG | - | tig0027531:22738-22757 | Msa1434450:intron | 50.0% | |
ACTTATCCTCACACCCTCAC+TGG | - | tig0027531:22762-22781 | Msa1434450:intron | 50.0% | |
! | TTGTAGACCGGTTCCAGTGA+GGG | + | tig0027531:22778-22797 | None:intergenic | 50.0% |
GGGTGTAGGTAGTTGTAGAC+CGG | + | tig0027531:22790-22809 | None:intergenic | 50.0% | |
! | ACCCTCGTTTTCCTCTTTCC+CGG | - | tig0027531:22806-22825 | Msa1434450:intron | 50.0% |
ACCGGGAAAGAGGAAAACGA+GGG | + | tig0027531:22810-22829 | None:intergenic | 50.0% | |
AACCGGGAAAGAGGAAAACG+AGG | + | tig0027531:22811-22830 | None:intergenic | 50.0% | |
CACTATTGTCAATGGCCGGA+GGG | + | tig0027531:23136-23155 | None:intergenic | 50.0% | |
GGTGCACTATTGTCAATGGC+CGG | + | tig0027531:23140-23159 | None:intergenic | 50.0% | |
!! | TCAGGTTTTGGTGAGGACGA+TGG | - | tig0027531:23567-23586 | Msa1434450:CDS | 50.0% |
GCAGTTCTACTTGACTCCTC+CGG | - | tig0027531:23678-23697 | Msa1434450:CDS | 50.0% | |
GGAAATAATCAGCCCCATGG+TGG | + | tig0027531:23749-23768 | None:intergenic | 50.0% | |
ATGTCAATGGCCGGAGGTAG+AGG | + | tig0027531:14956-14975 | None:intergenic | 55.0% | |
GGTGCACTCATGTCAATGGC+CGG | + | tig0027531:14965-14984 | None:intergenic | 55.0% | |
GGTTAGAACCGGGGTACAGA+AGG | + | tig0027531:15325-15344 | None:intergenic | 55.0% | |
! | CCCCGGTTCTAACCGATGAA+TGG | - | tig0027531:15331-15350 | Msa1434450:intron | 55.0% |
GAGGGTGACACCCCATTCAT+CGG | + | tig0027531:15346-15365 | None:intergenic | 55.0% | |
GGGGTTACATTAAGGGACGG+AGG | + | tig0027531:17695-17714 | None:intergenic | 55.0% | |
GGACGGAGGGAGTAGATCTT+AGG | - | tig0027531:17960-17979 | Msa1434450:intron | 55.0% | |
GGAGCTTCTATGGTGCAGTC+AGG | - | tig0027531:18260-18279 | Msa1434450:intron | 55.0% | |
!! | GCGCCATTGTCGTTTCTAGC+TGG | + | tig0027531:19304-19323 | None:intergenic | 55.0% |
AAAGTGGCAGCCTCCTATGG+CGG | + | tig0027531:20349-20368 | None:intergenic | 55.0% | |
TCGAAAGTGGCAGCCTCCTA+TGG | + | tig0027531:20352-20371 | None:intergenic | 55.0% | |
!! | GGCTGCCACTTTCGACCATT+AGG | - | tig0027531:20357-20376 | Msa1434450:intron | 55.0% |
ACCATTAGGTGAGGCCGAAG+TGG | - | tig0027531:20371-20390 | Msa1434450:intron | 55.0% | |
TCCACTTCGGCCTCACCTAA+TGG | + | tig0027531:20375-20394 | None:intergenic | 55.0% | |
TTAGGTGAGGCCGAAGTGGA+AGG | - | tig0027531:20375-20394 | Msa1434450:intron | 55.0% | |
! | TCGTCATTGCCACTTGAGGG+GGG | + | tig0027531:20403-20422 | None:intergenic | 55.0% |
! | GTCGTCATTGCCACTTGAGG+GGG | + | tig0027531:20404-20423 | None:intergenic | 55.0% |
! | CCAGTCGTCATTGCCACTTG+AGG | + | tig0027531:20407-20426 | None:intergenic | 55.0% |
CCTCAAGTGGCAATGACGAC+TGG | - | tig0027531:20404-20423 | Msa1434450:intron | 55.0% | |
GGTGGAATGAGCCCGGAATA+TGG | + | tig0027531:20487-20506 | None:intergenic | 55.0% | |
!! | CTATGGTGGTGGAATGAGCC+CGG | + | tig0027531:20494-20513 | None:intergenic | 55.0% |
AGTGTGCGTGCTAGCAATGG+TGG | + | tig0027531:21561-21580 | None:intergenic | 55.0% | |
GCAAGTGTGCGTGCTAGCAA+TGG | + | tig0027531:21564-21583 | None:intergenic | 55.0% | |
!! | ATCCATCTTGGCCTTGGTCC+AGG | + | tig0027531:22375-22394 | None:intergenic | 55.0% |
! | GTTGTAGACCGGTTCCAGTG+AGG | + | tig0027531:22779-22798 | None:intergenic | 55.0% |
TGATCTTGCTCCTCTCCCTC+CGG | - | tig0027531:23118-23137 | Msa1434450:intron | 55.0% | |
GCACTATTGTCAATGGCCGG+AGG | + | tig0027531:23137-23156 | None:intergenic | 55.0% | |
ATCGGTTAGAACCGGGACAC+CGG | + | tig0027531:23700-23719 | None:intergenic | 55.0% | |
! | TCCCGGTTCTAACCGATGAG+TGG | - | tig0027531:23703-23722 | Msa1434450:CDS | 55.0% |
! | CCCACTCATCGGTTAGAACC+GGG | + | tig0027531:23707-23726 | None:intergenic | 55.0% |
! | CCCGGTTCTAACCGATGAGT+GGG | - | tig0027531:23704-23723 | Msa1434450:CDS | 55.0% |
! | CCCCACTCATCGGTTAGAAC+CGG | + | tig0027531:23708-23727 | None:intergenic | 55.0% |
! | CCGGTTCTAACCGATGAGTG+GGG | - | tig0027531:23705-23724 | Msa1434450:CDS | 55.0% |
ACCCTCAACTCACTCCACCA+TGG | - | tig0027531:23732-23751 | Msa1434450:CDS | 55.0% | |
! | CCCATGGTGGAGTGAGTTGA+GGG | + | tig0027531:23736-23755 | None:intergenic | 55.0% |
CCCTCAACTCACTCCACCAT+GGG | - | tig0027531:23733-23752 | Msa1434450:CDS | 55.0% | |
CCTCAACTCACTCCACCATG+GGG | - | tig0027531:23734-23753 | Msa1434450:CDS | 55.0% | |
GCACTCATGTCAATGGCCGG+AGG | + | tig0027531:14962-14981 | None:intergenic | 60.0% | |
AGCGGGACTACCTAGCAACG+TGG | - | tig0027531:19942-19961 | Msa1434450:intron | 60.0% | |
GCACGAGAAGCCACGTTGCT+AGG | + | tig0027531:19955-19974 | None:intergenic | 60.0% | |
ACCTCTTCGGTTGAGGGAGG+CGG | - | tig0027531:20290-20309 | Msa1434450:intron | 60.0% | |
GTTGAGGGAGGCGGAGAAAG+CGG | - | tig0027531:20299-20318 | Msa1434450:intron | 60.0% | |
AAGTGGCAGCCTCCTATGGC+GGG | + | tig0027531:20348-20367 | None:intergenic | 60.0% | |
! | CGTCATTGCCACTTGAGGGG+GGG | + | tig0027531:20402-20421 | None:intergenic | 60.0% |
TGATGCGCAGCTGGCGCAAT+TGG | - | tig0027531:20755-20774 | Msa1434450:intron | 60.0% | |
CTCCTGGACCAAGGCCAAGA+TGG | - | tig0027531:22370-22389 | Msa1434450:intron | 60.0% | |
CCTCACACCCTCACTGGAAC+CGG | - | tig0027531:22768-22787 | Msa1434450:intron | 60.0% | |
TTGTCAATGGCCGGAGGGAG+AGG | + | tig0027531:23131-23150 | None:intergenic | 60.0% | |
ACTTGACTCCTCCGGTGTCC+CGG | - | tig0027531:23686-23705 | Msa1434450:CDS | 60.0% | |
GAGGGTGACACCCCACTCAT+CGG | + | tig0027531:23718-23737 | None:intergenic | 60.0% | |
! | CCCCATGGTGGAGTGAGTTG+AGG | + | tig0027531:23737-23756 | None:intergenic | 60.0% |
TCCGCCTCCCTCAACCGAAG+AGG | + | tig0027531:20294-20313 | None:intergenic | 65.0% | |
AGTGGCAGCCTCCTATGGCG+GGG | + | tig0027531:20347-20366 | None:intergenic | 65.0% | |
GAGGGGGGGACCTTCCACTT+CGG | + | tig0027531:20388-20407 | None:intergenic | 65.0% | |
TGGAAGGTCCCCCCCTCAAG+TGG | - | tig0027531:20391-20410 | Msa1434450:intron | 65.0% | |
GCGCAGCTGGCGCAATTGGT+AGG | - | tig0027531:20759-20778 | Msa1434450:intron | 65.0% | |
! | CCGGTTCCAGTGAGGGTGTG+AGG | + | tig0027531:22771-22790 | None:intergenic | 65.0% |
GGTTAGAACCGGGACACCGG+AGG | + | tig0027531:23697-23716 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0027531 | gene | 14785 | 23770 | 14785 | ID=Msa1434450;Name=Msa1434450 |
tig0027531 | mRNA | 14785 | 23770 | 14785 | ID=Msa1434450-mRNA-1;Parent=Msa1434450;Name=Msa1434450-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|0|0|1|0.4|0.16|6|0|425 |
tig0027531 | exon | 23530 | 23770 | 23530 | ID=Msa1434450-mRNA-1:exon:9225;Parent=Msa1434450-mRNA-1 |
tig0027531 | exon | 23201 | 23356 | 23201 | ID=Msa1434450-mRNA-1:exon:9224;Parent=Msa1434450-mRNA-1 |
tig0027531 | exon | 16008 | 16206 | 16008 | ID=Msa1434450-mRNA-1:exon:9223;Parent=Msa1434450-mRNA-1 |
tig0027531 | exon | 15766 | 16001 | 15766 | ID=Msa1434450-mRNA-1:exon:9222;Parent=Msa1434450-mRNA-1 |
tig0027531 | exon | 15457 | 15699 | 15457 | ID=Msa1434450-mRNA-1:exon:9221;Parent=Msa1434450-mRNA-1 |
tig0027531 | exon | 14785 | 14984 | 14785 | ID=Msa1434450-mRNA-1:exon:9220;Parent=Msa1434450-mRNA-1 |
tig0027531 | CDS | 23530 | 23770 | 23530 | ID=Msa1434450-mRNA-1:cds;Parent=Msa1434450-mRNA-1 |
tig0027531 | CDS | 23201 | 23356 | 23201 | ID=Msa1434450-mRNA-1:cds;Parent=Msa1434450-mRNA-1 |
tig0027531 | CDS | 16008 | 16206 | 16008 | ID=Msa1434450-mRNA-1:cds;Parent=Msa1434450-mRNA-1 |
tig0027531 | CDS | 15766 | 16001 | 15766 | ID=Msa1434450-mRNA-1:cds;Parent=Msa1434450-mRNA-1 |
tig0027531 | CDS | 15457 | 15699 | 15457 | ID=Msa1434450-mRNA-1:cds;Parent=Msa1434450-mRNA-1 |
tig0027531 | CDS | 14785 | 14984 | 14785 | ID=Msa1434450-mRNA-1:cds;Parent=Msa1434450-mRNA-1 |
Gene Sequence |
Protein sequence |