AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1434450


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1434450 MtrunA17_Chr7g0223471 49.600 375 103 8 133 425 34 404 1.19e-101 308
Msa1434450 MtrunA17_Chr7g0223471 61.654 133 50 1 1 133 259 390 3.11e-48 169
Msa1434450 MtrunA17_Chr4g0046231 59.385 325 68 7 165 425 1 325 2.03e-100 302
Msa1434450 MtrunA17_Chr4g0046231 88.722 133 14 1 1 133 180 311 1.81e-78 246
Msa1434450 MtrunA17_Chr4g0046241 73.134 134 10 3 252 359 2 135 1.33e-53 176
Msa1434450 MtrunA17_Chr4g0046241 83.951 81 13 0 1 81 89 169 3.52e-41 144
Msa1434450 MtrunA17_Chr2g0283141 36.267 375 138 11 137 425 46 405 1.54e-49 174
Msa1434450 MtrunA17_Chr4g0046251 88.235 68 8 0 358 425 17 84 4.77e-38 132
Msa1434450 MtrunA17_Chr4g0046251 56.364 55 24 0 79 133 16 70 1.83e-14 68.6
Msa1434450 MtrunA17_Chr6g0460691 60.000 60 24 0 138 197 24 83 1.82e-19 88.6
Msa1434450 MtrunA17_Chr7g0254251 60.345 58 23 0 138 195 20 77 1.79e-17 82.0
Msa1434450 MtrunA17_Chr4g0043891 44.262 61 34 0 141 201 3 63 1.19e-12 67.8
Msa1434450 MtrunA17_Chr8g0392991 40.000 80 42 2 146 223 96 171 4.75e-12 67.0
Msa1434450 MtrunA17_Chr5g0436661 31.933 119 61 3 146 244 33 151 1.81e-11 62.8
Msa1434450 MtrunA17_Chr5g0405351 29.787 141 68 3 146 255 30 170 5.29e-11 63.5
Msa1434450 MtrunA17_Chr1g0212511 37.097 62 39 0 143 204 82 143 7.21e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1434450 AT5G45980.1 33.220 295 173 5 138 425 47 324 2.07e-35 133
Msa1434450 AT2G33880.1 65.714 70 24 0 134 203 43 112 1.69e-27 113
Msa1434450 AT2G33880.1 49.153 59 30 0 367 425 319 377 2.61e-12 68.6
Msa1434450 AT2G33880.2 65.714 70 24 0 134 203 43 112 1.89e-27 113
Msa1434450 AT2G33880.2 49.153 59 30 0 367 425 319 377 3.13e-12 68.2
Msa1434450 AT5G17810.3 62.963 54 20 0 144 197 19 72 6.05e-18 84.0
Msa1434450 AT5G17810.1 62.963 54 20 0 144 197 19 72 6.15e-18 84.0
Msa1434450 AT5G17810.2 62.963 54 20 0 144 197 19 72 6.15e-18 84.0
Msa1434450 AT3G03660.1 61.111 54 21 0 144 197 31 84 1.30e-17 82.8
Msa1434450 AT3G03660.2 61.111 54 21 0 144 197 31 84 2.08e-17 82.8
Msa1434450 AT3G03660.4 61.111 54 21 0 144 197 31 84 2.77e-17 82.4
Msa1434450 AT3G03660.3 61.111 54 21 0 144 197 31 84 4.11e-17 82.4
Msa1434450 AT2G17950.1 41.250 80 45 2 146 223 38 117 3.94e-12 67.0
Msa1434450 AT5G05770.1 36.000 75 41 1 146 213 29 103 1.49e-11 62.0
Msa1434450 AT3G18010.1 44.643 56 31 0 146 201 76 131 3.44e-11 64.7
Msa1434450 AT1G20700.1 32.967 91 58 1 130 220 79 166 4.23e-11 62.8
Msa1434450 AT1G20700.2 36.364 77 46 1 144 220 31 104 4.55e-11 61.2
Msa1434450 AT1G20700.3 32.967 91 58 1 130 220 79 166 6.30e-11 62.0

Find 118 sgRNAs with CRISPR-Local

Find 553 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGACCCGCAATTTAATTT+TGG 0.177107 tig0027531:-23649 Msa1434450:CDS
CAAGACCCACAACTTAATTT+TGG 0.181827 tig0027531:-15474 Msa1434450:CDS
TGTTTCCTGTTTCTTGTTAT+AGG 0.203606 tig0027531:+15959 None:intergenic
CGTGGACAATTAGAAGAATT+TGG 0.217411 tig0027531:-16053 Msa1434450:CDS
GGTAGGGATTGACTCATATT+TGG 0.224718 tig0027531:+15627 None:intergenic
AAGAATTTACGAACGTTAAA+AGG 0.235477 tig0027531:+14888 None:intergenic
TCATCTTCCTCTAACAATAT+TGG 0.243443 tig0027531:-15870 Msa1434450:CDS
GTTTCCTGTTTCTTGTTATA+GGG 0.246182 tig0027531:+15960 None:intergenic
AAAGGATTCACGAACGTTAA+AGG 0.277504 tig0027531:+23259 None:intergenic
ATGAACAATGAAAATGAAAA+TGG 0.285973 tig0027531:-23748 Msa1434450:CDS
CCATGGGGCTGATTATTTCC+TGG 0.287811 tig0027531:-14784 None:intergenic
GATAAGTACCACCTTGGTTT+TGG 0.292529 tig0027531:+15787 None:intergenic
TTTAACGTTCGTAAATTCTT+TGG 0.298436 tig0027531:-14885 Msa1434450:CDS
AGAGAGATTGCAGGTGAATT+AGG 0.299501 tig0027531:+15813 None:intergenic
CACCGTCCCATCATTAATAT+TGG 0.306396 tig0027531:+15842 None:intergenic
TGCGGATTTGCTCAGGCTTT+GGG 0.317008 tig0027531:+16138 None:intergenic
ATGCGGATTTGCTCAGGCTT+TGG 0.318582 tig0027531:+16137 None:intergenic
TCAGGCTTTGGGATCCATCT+TGG 0.322557 tig0027531:+16149 None:intergenic
GAAGTTGATCATCAGTAAAA+AGG 0.326950 tig0027531:+23533 None:intergenic
TTTGGGATCCATCTTGGCCT+TGG 0.327019 tig0027531:+16155 None:intergenic
CTCAAAGCCATCTATAACTC+AGG 0.355199 tig0027531:-16113 Msa1434450:CDS
GGAGATTCCAATATTGTTAG+AGG 0.358018 tig0027531:+15863 None:intergenic
CTTGTTATAGGGTACTTTGT+TGG 0.367143 tig0027531:+15971 None:intergenic
TTTACTGATGATCAACTTCA+AGG 0.378920 tig0027531:-23529 Msa1434450:intron
AATTAAATTGCGGGTCTTGT+TGG 0.379122 tig0027531:+23653 None:intergenic
CGTCATCCCTGAGTTATAGA+TGG 0.384216 tig0027531:+16106 None:intergenic
TGACACCAAAATTAAATTGC+GGG 0.395460 tig0027531:+23644 None:intergenic
AGTGGTGGTGTGGTGATTTG+TGG 0.396224 tig0027531:+15906 None:intergenic
CCCCATTCATCGGTTAGAAC+CGG 0.398111 tig0027531:+23200 None:intergenic
CCCGGTTCTAACCGATGAAT+GGG 0.399463 tig0027531:-23201 Msa1434450:CDS
CCCCACTCATCGGTTAGAAC+CGG 0.406777 tig0027531:+14828 None:intergenic
AACATCATGACCTATGGAAA+TGG 0.408768 tig0027531:-15573 Msa1434450:CDS
ATTTGTGGGAGAGAGCTATC+TGG 0.415068 tig0027531:+15921 None:intergenic
GTGCATGTGCATCATATTCA+TGG 0.415898 tig0027531:+23675 None:intergenic
CCCTCAACTCACTCCACCAT+GGG 0.416100 tig0027531:-14800 Msa1434450:CDS
ATCCATCTTGGCCTTGGTCC+AGG 0.421536 tig0027531:+16161 None:intergenic
GGAATCTCCAATATTAATGA+TGG 0.434654 tig0027531:-15849 Msa1434450:CDS
TTTAACGTTCGTGAATCCTT+TGG 0.434959 tig0027531:-23257 Msa1434450:CDS
AATTAAGTTGTGGGTCTTGT+TGG 0.440039 tig0027531:+15478 None:intergenic
TTGAGAATGCGGATTTGCTC+AGG 0.441470 tig0027531:+16131 None:intergenic
AAGGATTCACGAACGTTAAA+GGG 0.443421 tig0027531:+23260 None:intergenic
GTGGTGGTGTGGTGATTTGT+GGG 0.445822 tig0027531:+15907 None:intergenic
CCCCGGTTCTAACCGATGAA+TGG 0.455370 tig0027531:-23202 Msa1434450:CDS
CCTCACACCCTCACTGGAAC+CGG 0.457199 tig0027531:-15765 Msa1434450:intron
GATGATGAAGAAAGAACTCC+TGG 0.460723 tig0027531:-16179 Msa1434450:CDS
ACTTGACTCCTCCGGTGTCC+CGG 0.468788 tig0027531:-14847 Msa1434450:CDS
CCCATTCATCGGTTAGAACC+GGG 0.470305 tig0027531:+23201 None:intergenic
AGTACCCTATAACAAGAAAC+AGG 0.472976 tig0027531:-15964 Msa1434450:CDS
ATGTCAATGGCCGGAGGTAG+AGG 0.473475 tig0027531:+23580 None:intergenic
TATGATAACATCATGACCTA+TGG 0.476880 tig0027531:-15579 Msa1434450:CDS
CCCGGTTCTAACCGATGAGT+GGG 0.480119 tig0027531:-14829 Msa1434450:CDS
TTAGAAGAATTTGGACCGAT+TGG 0.480912 tig0027531:-16044 Msa1434450:CDS
ACTTATCCTCACACCCTCAC+TGG 0.497083 tig0027531:-15771 Msa1434450:CDS
CTCCTGGACCAAGGCCAAGA+TGG 0.498721 tig0027531:-16163 Msa1434450:CDS
GTTCGTAAATTCTTTGGCGA+TGG 0.502140 tig0027531:-14879 Msa1434450:CDS
TAGTGCTTAATGACATGATA+AGG 0.507658 tig0027531:-15680 Msa1434450:CDS
CCCCATGGTGGAGTGAGTTG+AGG 0.511520 tig0027531:+14799 None:intergenic
ACGATGGTACAGCAAAATGT+AGG 0.522895 tig0027531:-14950 Msa1434450:CDS
GGTACATTCAAAGTTAATGC+AGG 0.526348 tig0027531:-14912 Msa1434450:CDS
CCCATGGTGGAGTGAGTTGA+GGG 0.532190 tig0027531:+14800 None:intergenic
TGAGCAGTTTCCATTTCCAT+AGG 0.532338 tig0027531:+15563 None:intergenic
GAGAAGTAATTAAACCCCTC+TGG 0.532494 tig0027531:+15657 None:intergenic
TGACACCAAAATTAAGTTGT+GGG 0.534770 tig0027531:+15469 None:intergenic
GGTGCACTCATGTCAATGGC+CGG 0.541661 tig0027531:+23571 None:intergenic
AGCAGGTGCACTCATGTCAA+TGG 0.543766 tig0027531:+23567 None:intergenic
GTTAACCTCGATTACTTCGT+TGG 0.544175 tig0027531:+23289 None:intergenic
TTGTAGACCGGTTCCAGTGA+GGG 0.546990 tig0027531:+15758 None:intergenic
AAAAGGAATGGAATATCAGC+AGG 0.549420 tig0027531:+23550 None:intergenic
GAGGGTGACACCCCATTCAT+CGG 0.558082 tig0027531:+23190 None:intergenic
TGATCAAGTGAATGTTCAAG+AGG 0.560823 tig0027531:-23701 Msa1434450:CDS
GTTTGACTCCTTCTGTACCC+CGG 0.561060 tig0027531:-23219 Msa1434450:CDS
TCCCGGTTCTAACCGATGAG+TGG 0.562878 tig0027531:-14830 Msa1434450:CDS
CTCCAATATTAATGATGGGA+CGG 0.566336 tig0027531:-15844 Msa1434450:CDS
CCCACTCATCGGTTAGAACC+GGG 0.569151 tig0027531:+14829 None:intergenic
TATAGATGGCTTTGAGAATG+CGG 0.572647 tig0027531:+16120 None:intergenic
ATCGGTTAGAACCGGGACAC+CGG 0.573165 tig0027531:+14836 None:intergenic
ACCCTCAACTCACTCCACCA+TGG 0.573606 tig0027531:-14801 Msa1434450:CDS
GAATCTCCAATATTAATGAT+GGG 0.575519 tig0027531:-15848 Msa1434450:CDS
CGATGGTACAGCAAAATGTA+GGG 0.576909 tig0027531:-14949 Msa1434450:CDS
GCAGTTCTACTTGACTCCTC+CGG 0.578536 tig0027531:-14855 Msa1434450:CDS
GGTTAGAACCGGGGTACAGA+AGG 0.581477 tig0027531:+23211 None:intergenic
TTGAAACCAATAAAAGACGC+TGG 0.582551 tig0027531:+16016 None:intergenic
TGATCTTGCTCCTCTACCTC+CGG 0.584790 tig0027531:-23590 Msa1434450:CDS
CCGGTTCCAGTGAGGGTGTG+AGG 0.585988 tig0027531:+15765 None:intergenic
GTGACACCAAAATTAAATTG+CGG 0.589142 tig0027531:+23643 None:intergenic
GAGGGTGACACCCCACTCAT+CGG 0.597239 tig0027531:+14818 None:intergenic
AAGACGCTGGAATCACCAAT+CGG 0.600408 tig0027531:+16029 None:intergenic
TTATCAAGAGAATATTCAAG+AGG 0.601533 tig0027531:-15526 Msa1434450:CDS
GAAGTAATCGAGGTTAACGC+AGG 0.607642 tig0027531:-23284 Msa1434450:CDS
TACTGCCAACGAAGTAATCG+AGG 0.608047 tig0027531:-23294 Msa1434450:CDS
TCAAAGCCATCTATAACTCA+GGG 0.608140 tig0027531:-16112 Msa1434450:CDS
GTGACACCAAAATTAAGTTG+TGG 0.611199 tig0027531:+15468 None:intergenic
CAGAACTGCTCTATTACCAA+AGG 0.619722 tig0027531:+23241 None:intergenic
TGTAGGGTGATTACTATCAA+CGG 0.630138 tig0027531:-14933 Msa1434450:CDS
TGTGAGGATAAGTACCACCT+TGG 0.631687 tig0027531:+15781 None:intergenic
GGAAATAATCAGCCCCATGG+TGG 0.634153 tig0027531:+14787 None:intergenic
GTACATTCAAAGTTAATGCA+GGG 0.634787 tig0027531:-14911 Msa1434450:CDS
GTTGTAGACCGGTTCCAGTG+AGG 0.637143 tig0027531:+15757 None:intergenic
ATCTCTCTGAGCCAAAACCA+AGG 0.639915 tig0027531:-15798 Msa1434450:CDS
TATTAATGATGGGACGGTGA+TGG 0.642433 tig0027531:-15838 Msa1434450:CDS
AAGAAAGAACTCCTGGACCA+AGG 0.644218 tig0027531:-16172 Msa1434450:CDS
AGATGAGTTGAGTGGTGGTG+TGG 0.655150 tig0027531:+15896 None:intergenic
CCAGGAAATAATCAGCCCCA+TGG 0.655999 tig0027531:+14784 None:intergenic
TAATGACATGATAAGGCCAG+AGG 0.662717 tig0027531:-15673 Msa1434450:CDS
GGTTAGAACCGGGACACCGG+AGG 0.663701 tig0027531:+14839 None:intergenic
AAGTAATCGAGGTTAACGCA+GGG 0.673390 tig0027531:-23283 Msa1434450:CDS
TTCTTAATCTCATCTCTACG+TGG 0.679677 tig0027531:+16080 None:intergenic
AATGACATGATAAGGCCAGA+GGG 0.681201 tig0027531:-15672 Msa1434450:CDS
CCGGTTCTAACCGATGAATG+GGG 0.682846 tig0027531:-23200 Msa1434450:intron
CCGGTTCTAACCGATGAGTG+GGG 0.684812 tig0027531:-14828 Msa1434450:CDS
CCATTCATCGGTTAGAACCG+GGG 0.687831 tig0027531:+23202 None:intergenic
GCACTCATGTCAATGGCCGG+AGG 0.689498 tig0027531:+23574 None:intergenic
ATGACATGATAAGGCCAGAG+GGG 0.698753 tig0027531:-15671 Msa1434450:CDS
GATGATGAAGATGAGTTGAG+TGG 0.699555 tig0027531:+15888 None:intergenic
CCTCAACTCACTCCACCATG+GGG 0.702965 tig0027531:-14799 Msa1434450:CDS
GATGAGATTAAGAAGATACG+TGG 0.711435 tig0027531:-16071 Msa1434450:CDS
GATGAAGATGAGTTGAGTGG+TGG 0.726884 tig0027531:+15891 None:intergenic
TCTCTGAGCCAAAACCAAGG+TGG 0.727096 tig0027531:-15795 Msa1434450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTATAATAATAAAATAA+TGG - tig0027531:15831-15850 Msa1434450:CDS 0.0%
!!! CTTTTTACTAAAAAAATTAA+AGG + tig0027531:15805-15824 None:intergenic 10.0%
!! AAAAATTTACTAAAAAAAAG+AGG - tig0027531:15906-15925 Msa1434450:CDS 10.0%
!!! TTATTTTTCATATATAACTA+TGG - tig0027531:16059-16078 Msa1434450:CDS 10.0%
!!! CTAAATAAAATATTCAATTT+TGG + tig0027531:18086-18105 None:intergenic 10.0%
!!! TTAAAATTAGGAAAATTTTA+TGG + tig0027531:18674-18693 None:intergenic 10.0%
!! CAAAAAAAAAAAAAAACATA+GGG + tig0027531:19472-19491 None:intergenic 10.0%
!! TCAAAAAAAAAAAAAAACAT+AGG + tig0027531:19473-19492 None:intergenic 10.0%
!!! ATCAAGATATTTTTTTTTTA+AGG - tig0027531:19854-19873 Msa1434450:intron 10.0%
!!! GATAATTTTATAAACAAAAA+AGG + tig0027531:21354-21373 None:intergenic 10.0%
!!! TTCTATAACTAATTTTTTAT+GGG + tig0027531:22217-22236 None:intergenic 10.0%
!!! TTTCTATAACTAATTTTTTA+TGG + tig0027531:22218-22237 None:intergenic 10.0%
!! AATTACAAATATAGATGATT+TGG - tig0027531:15520-15539 Msa1434450:CDS 15.0%
!! TATATAACTATGGATTTAAT+TGG - tig0027531:16069-16088 Msa1434450:CDS 15.0%
!!! TTATTTTGAAAATTACGTAT+AGG - tig0027531:16153-16172 Msa1434450:CDS 15.0%
!! TCCATATTACTATATTTATA+GGG - tig0027531:17021-17040 Msa1434450:intron 15.0%
!! AAAAATTATATATAACCACT+CGG + tig0027531:18007-18026 None:intergenic 15.0%
!!! TTTTGAATACGATAATTTAA+AGG - tig0027531:18238-18257 Msa1434450:intron 15.0%
!! TTTGAATACGATAATTTAAA+GGG - tig0027531:18239-18258 Msa1434450:intron 15.0%
!!! CAATCAAAGTATTTAAAATT+AGG + tig0027531:18686-18705 None:intergenic 15.0%
!! TATGAAATTCTATAAGAAAT+TGG + tig0027531:18968-18987 None:intergenic 15.0%
!! ATTTCTTATAGAATTTCATA+AGG - tig0027531:18968-18987 Msa1434450:intron 15.0%
!! AAATTAGAACTATTTAAACT+TGG - tig0027531:19388-19407 Msa1434450:intron 15.0%
!! AATTAGAACTATTTAAACTT+GGG - tig0027531:19389-19408 Msa1434450:intron 15.0%
!!! AAACAAATTATATATCGATT+TGG - tig0027531:21912-21931 Msa1434450:intron 15.0%
!!! TTCAATAAAAAAGATTTGTT+TGG + tig0027531:21975-21994 None:intergenic 15.0%
!!! AACAAATCTTTTTTATTGAA+TGG - tig0027531:21975-21994 Msa1434450:intron 15.0%
!! ATTATGATTTATATATCTCA+TGG - tig0027531:23461-23480 Msa1434450:intron 15.0%
!! ATGAACAATGAAAATGAAAA+TGG - tig0027531:14785-14804 Msa1434450:CDS 20.0%
!! TTTATAAGGGAAAATGATTT+GGG + tig0027531:15643-15662 None:intergenic 20.0%
!!! TTTTATAAGGGAAAATGATT+TGG + tig0027531:15644-15663 None:intergenic 20.0%
!!! GGGAACTTTTTTTTTTATAA+GGG + tig0027531:15656-15675 None:intergenic 20.0%
!!! TGGGAACTTTTTTTTTTATA+AGG + tig0027531:15657-15676 None:intergenic 20.0%
!! TTACCTAATCAAAATGATTT+GGG + tig0027531:15676-15695 None:intergenic 20.0%
!! ATTACCTAATCAAAATGATT+TGG + tig0027531:15677-15696 None:intergenic 20.0%
!! TTTGATTAGGTAATGATATT+TGG - tig0027531:15683-15702 Msa1434450:intron 20.0%
!!! AATTAGTGTTGAAGAATTAA+TGG + tig0027531:15712-15731 None:intergenic 20.0%
!! ATTTAATTGGTATACCTTAT+GGG - tig0027531:16082-16101 Msa1434450:CDS 20.0%
!! AAAAAATATTTACACCCATA+AGG + tig0027531:16099-16118 None:intergenic 20.0%
!! CAAACATTTCATCAAATATA+TGG + tig0027531:16451-16470 None:intergenic 20.0%
!!! TCATAATTTTTCTTTCTTTC+CGG + tig0027531:16614-16633 None:intergenic 20.0%
!! ATTTATGTAATTAATGATCG+TGG - tig0027531:16636-16655 Msa1434450:intron 20.0%
!! AAACTAAATTCTTTCACATA+TGG + tig0027531:16687-16706 None:intergenic 20.0%
!!! CTTATTTTATTGTCAAAATG+AGG - tig0027531:16865-16884 Msa1434450:intron 20.0%
!! CTCCATATTACTATATTTAT+AGG - tig0027531:17020-17039 Msa1434450:intron 20.0%
!! ACCCTATAAATATAGTAATA+TGG + tig0027531:17025-17044 None:intergenic 20.0%
!! TATAATTCTCATTCACTATA+CGG + tig0027531:17330-17349 None:intergenic 20.0%
!!! TTGATTAAAAGAGTACTAAA+AGG + tig0027531:17414-17433 None:intergenic 20.0%
!! TATTTGATCTTATGATGATT+TGG + tig0027531:17568-17587 None:intergenic 20.0%
!! AGATCAAATAGATCTTATAT+AGG - tig0027531:17578-17597 Msa1434450:intron 20.0%
!! ATTAAATCAAACATCTTGAA+GGG + tig0027531:17664-17683 None:intergenic 20.0%
!! AATTAAATCAAACATCTTGA+AGG + tig0027531:17665-17684 None:intergenic 20.0%
!! AGAAATGTAAAAAATGCAAA+GGG + tig0027531:17717-17736 None:intergenic 20.0%
!! AAGAAATGTAAAAAATGCAA+AGG + tig0027531:17718-17737 None:intergenic 20.0%
!! TTTAATACACATACAAACAA+AGG + tig0027531:17800-17819 None:intergenic 20.0%
!! ACAAGTTAGTAGTATTAATT+AGG - tig0027531:17841-17860 Msa1434450:intron 20.0%
!! CAAGTTAGTAGTATTAATTA+GGG - tig0027531:17842-17861 Msa1434450:intron 20.0%
!! AAGTTAGTAGTATTAATTAG+GGG - tig0027531:17843-17862 Msa1434450:intron 20.0%
!!! TATTCAAAATTTGCTAACTT+TGG + tig0027531:18227-18246 None:intergenic 20.0%
!!! TACAAGTACTATTTTATTGT+CGG - tig0027531:18402-18421 Msa1434450:intron 20.0%
!! CAAAAATTGAGTAATTTCAT+AGG - tig0027531:18909-18928 Msa1434450:intron 20.0%
!!! ATTGGAACTATATTTTTTCA+TGG + tig0027531:18950-18969 None:intergenic 20.0%
!! CCAATAAAAAGAATGAATAT+TGG + tig0027531:19326-19345 None:intergenic 20.0%
!!! CCAATATTCATTCTTTTTAT+TGG - tig0027531:19323-19342 Msa1434450:intron 20.0%
!! CGTGTAAAATAAAAAACATA+GGG + tig0027531:19504-19523 None:intergenic 20.0%
!! TCGTGTAAAATAAAAAACAT+AGG + tig0027531:19505-19524 None:intergenic 20.0%
!! TAGCATTTACTGTTATTAAT+TGG + tig0027531:19577-19596 None:intergenic 20.0%
!! AAATCAAATTCAATATCTTG+AGG + tig0027531:19730-19749 None:intergenic 20.0%
!! AATAAGAGTTTCAATAAAAC+TGG - tig0027531:19903-19922 Msa1434450:intron 20.0%
!! ATAAGAGTTTCAATAAAACT+GGG - tig0027531:19904-19923 Msa1434450:intron 20.0%
!! ACTTCTAAATATCTTGATAA+AGG + tig0027531:20795-20814 None:intergenic 20.0%
!!! TAGAAGTTTTGTTTTACTAA+AGG - tig0027531:20808-20827 Msa1434450:intron 20.0%
!! TACTCAAATTGTATTATTCA+GGG + tig0027531:21000-21019 None:intergenic 20.0%
!! TTACTCAAATTGTATTATTC+AGG + tig0027531:21001-21020 None:intergenic 20.0%
!! AATGTAAAGTTCTTTCTTTA+GGG + tig0027531:21063-21082 None:intergenic 20.0%
!! AAATGTAAAGTTCTTTCTTT+AGG + tig0027531:21064-21083 None:intergenic 20.0%
!! AAAGTAGAAACAAACAAAAA+CGG + tig0027531:21292-21311 None:intergenic 20.0%
!!! GATATATAATTTGTTTCGAT+TGG + tig0027531:21908-21927 None:intergenic 20.0%
!!! TAGTAAAGACCAAATTTTTT+TGG + tig0027531:22005-22024 None:intergenic 20.0%
!!! AATAGTTGATGTTTAGATTT+AGG + tig0027531:22094-22113 None:intergenic 20.0%
!! TTGAGAATCATATTAATGAA+AGG - tig0027531:22829-22848 Msa1434450:intron 20.0%
!! TGAGAATCATATTAATGAAA+GGG - tig0027531:22830-22849 Msa1434450:intron 20.0%
!! GAATATTCTCTTGATAAAAA+AGG + tig0027531:23004-23023 None:intergenic 20.0%
!! TTCAAATATTCATCCTTAAT+TGG + tig0027531:23255-23274 None:intergenic 20.0%
!! ATATAAATCATAATCATACC+CGG + tig0027531:23455-23474 None:intergenic 20.0%
!! TATAACGATTAGTTGATGTT+TGG - tig0027531:15169-15188 Msa1434450:intron 25.0%
!! TAATTTGTACGTGTCTAATA+TGG - tig0027531:15753-15772 Msa1434450:intron 25.0%
!!! CATCTTTTGATCATTTTTAG+AGG + tig0027531:15780-15799 None:intergenic 25.0%
! AAATAGAGAGATCAATAATG+TGG + tig0027531:15996-16015 None:intergenic 25.0%
! GATTTAATTGGTATACCTTA+TGG - tig0027531:16081-16100 Msa1434450:CDS 25.0%
! GGAAAGAAAGAAAAATTATG+AGG - tig0027531:16613-16632 Msa1434450:intron 25.0%
! ATTCTTTCACATATGGTAAA+TGG + tig0027531:16680-16699 None:intergenic 25.0%
!! ATTTTATTGTCAAAATGAGG+AGG - tig0027531:16868-16887 Msa1434450:intron 25.0%
! AATCCAAAATCAAATTGAGT+AGG + tig0027531:17291-17310 None:intergenic 25.0%
!!! GCAATTATTTTGATTATCCT+TGG + tig0027531:17639-17658 None:intergenic 25.0%
! AAATGTAAAAAATGCAAAGG+GGG + tig0027531:17715-17734 None:intergenic 25.0%
! GAAATGTAAAAAATGCAAAG+GGG + tig0027531:17716-17735 None:intergenic 25.0%
! ATGCATCTAGTAATTTGAAA+AGG - tig0027531:17888-17907 Msa1434450:intron 25.0%
! TGCATCTAGTAATTTGAAAA+GGG - tig0027531:17889-17908 Msa1434450:intron 25.0%
! TTGAAAAGGGATTTACATTT+AGG - tig0027531:17902-17921 Msa1434450:intron 25.0%
! TGAAAAGGGATTTACATTTA+GGG - tig0027531:17903-17922 Msa1434450:intron 25.0%
! TCAAATGAGTGTTTAGATAT+AGG - tig0027531:17938-17957 Msa1434450:intron 25.0%
! CAAATGAGTGTTTAGATATA+GGG - tig0027531:17939-17958 Msa1434450:intron 25.0%
!! ATGAATTGATGATACTATGA+GGG - tig0027531:18548-18567 Msa1434450:intron 25.0%
!! AAAATTTTATGGTGAAGTCA+TGG + tig0027531:18663-18682 None:intergenic 25.0%
! TTGATTGTCATTATAGCTAT+CGG - tig0027531:18699-18718 Msa1434450:intron 25.0%
! ACTAGAAAACAAATATTCCT+TGG + tig0027531:18776-18795 None:intergenic 25.0%
! GAATTTCTTTCTATATCACT+TGG + tig0027531:18807-18826 None:intergenic 25.0%
! TAATTTCATAGGAGAGTTAT+TGG - tig0027531:18920-18939 Msa1434450:intron 25.0%
! ATCTTTACAACTATTATGCA+AGG - tig0027531:19123-19142 Msa1434450:intron 25.0%
! TTGATTTCCATTCATGAAAA+AGG - tig0027531:19743-19762 Msa1434450:intron 25.0%
! TTCTTTGCTTGAAAATTTGT+CGG + tig0027531:20607-20626 None:intergenic 25.0%
! AGATCATCAATTCAAAACAT+CGG - tig0027531:20960-20979 Msa1434450:intron 25.0%
! TAATTGAACGAGTAGAAAAT+GGG + tig0027531:21101-21120 None:intergenic 25.0%
! GTAGTAGTAAATAACTGTAA+TGG + tig0027531:21133-21152 None:intergenic 25.0%
! TATGCGTTGTATTAAATAGA+AGG - tig0027531:21399-21418 Msa1434450:intron 25.0%
!!! CTTTCTTCATGTTATTTTGA+CGG + tig0027531:21434-21453 None:intergenic 25.0%
! TGCAAAGAGTAAATAAAAGA+GGG + tig0027531:21484-21503 None:intergenic 25.0%
! TTGCAAAGAGTAAATAAAAG+AGG + tig0027531:21485-21504 None:intergenic 25.0%
! AGGAGAAGAAATATATAGAA+TGG + tig0027531:21520-21539 None:intergenic 25.0%
! AATAATTAGAAGGAGTTGTT+TGG + tig0027531:21805-21824 None:intergenic 25.0%
!!! ATTTGGTTTTTTTCCTTGTT+GGG - tig0027531:21929-21948 Msa1434450:intron 25.0%
! AATGGCAAACCAAAAAAATT+TGG - tig0027531:21993-22012 Msa1434450:intron 25.0%
!! AACTATTTGATCTTTTCCAA+TGG - tig0027531:22107-22126 Msa1434450:intron 25.0%
! TTTACATTGTCAAGCAAATA+TGG + tig0027531:22138-22157 None:intergenic 25.0%
! TTGCTTGACAATGTAAATTT+AGG - tig0027531:22141-22160 Msa1434450:intron 25.0%
! ATCAGAATATTAATACTCCA+TGG - tig0027531:22239-22258 Msa1434450:intron 25.0%
!!! GCTTACGACAAATATTTTTT+AGG - tig0027531:22327-22346 Msa1434450:intron 25.0%
!!! TACGACAAATATTTTTTAGG+TGG - tig0027531:22330-22349 Msa1434450:intron 25.0%
! GAATCTCCAATATTAATGAT+GGG - tig0027531:22685-22704 Msa1434450:intron 25.0%
! TCATTAATATGATTCTCAAC+CGG + tig0027531:22828-22847 None:intergenic 25.0%
! TTATCAAGAGAATATTCAAG+AGG - tig0027531:23007-23026 Msa1434450:intron 25.0%
! GTGCTAAATAATTCCAATTA+AGG - tig0027531:23239-23258 Msa1434450:CDS 25.0%
! AAAAATTGTTCAAACTAGCT+AGG + tig0027531:23295-23314 None:intergenic 25.0%
! AAGAATTTACGAACGTTAAA+AGG + tig0027531:23648-23667 None:intergenic 25.0%
! TTTAACGTTCGTAAATTCTT+TGG - tig0027531:23648-23667 Msa1434450:CDS 25.0%
CACTTGATCAAAAAGATCAT+TGG + tig0027531:14822-14841 None:intergenic 30.0%
TGACACCAAAATTAAATTGC+GGG + tig0027531:14892-14911 None:intergenic 30.0%
GTGACACCAAAATTAAATTG+CGG + tig0027531:14893-14912 None:intergenic 30.0%
TGATCATCAGTAAAAAGGAA+TGG + tig0027531:14998-15017 None:intergenic 30.0%
! GAAGTTGATCATCAGTAAAA+AGG + tig0027531:15003-15022 None:intergenic 30.0%
TTTACTGATGATCAACTTCA+AGG - tig0027531:15004-15023 Msa1434450:intron 30.0%
!!! TTAGTTGATGTTTGGTTTTC+AGG - tig0027531:15177-15196 Msa1434450:intron 30.0%
!!! GTTCCCAAATCATTTTGATT+AGG - tig0027531:15670-15689 Msa1434450:CDS 30.0%
CTAATATAGATCAAGTCCAA+TGG + tig0027531:15937-15956 None:intergenic 30.0%
! ACTATATACGCACAATCTTT+TGG - tig0027531:16271-16290 Msa1434450:intron 30.0%
ATGCTGATAACTCAATTGTA+AGG + tig0027531:16540-16559 None:intergenic 30.0%
TGTTAGCTCATTTCAACTAT+AGG + tig0027531:16591-16610 None:intergenic 30.0%
!! AAGAATTTAGTTTGCGTGTT+AGG - tig0027531:16694-16713 Msa1434450:intron 30.0%
!!! TTGGTTTGTTAATGCACTTT+TGG - tig0027531:16726-16745 Msa1434450:intron 30.0%
!! GTGTATTGATAGCATGTTTT+CGG - tig0027531:16763-16782 Msa1434450:intron 30.0%
!! TTGCCTACTCAATTTGATTT+TGG - tig0027531:17285-17304 Msa1434450:intron 30.0%
TCATTGCTGATAAAGATTTG+TGG + tig0027531:17616-17635 None:intergenic 30.0%
AATGTAAAAAATGCAAAGGG+GGG + tig0027531:17714-17733 None:intergenic 30.0%
CATACAAACAAAGGACAATT+TGG + tig0027531:17791-17810 None:intergenic 30.0%
! TATTAATTAGGGGTGTGTTT+AGG - tig0027531:17853-17872 Msa1434450:intron 30.0%
!! AGTCATAAAAGCATTCAGTA+CGG + tig0027531:18056-18075 None:intergenic 30.0%
! TATGATTCTAGTTGTTAGAC+AGG - tig0027531:18134-18153 Msa1434450:intron 30.0%
! ATGATTCTAGTTGTTAGACA+GGG - tig0027531:18135-18154 Msa1434450:intron 30.0%
TTGGATTTACAATGACAAAC+TGG - tig0027531:18158-18177 Msa1434450:intron 30.0%
TAATTTAAAGGGAGCTTCTA+TGG - tig0027531:18250-18269 Msa1434450:intron 30.0%
TCTTAAGTGTTACACTTTGT+GGG - tig0027531:18467-18486 Msa1434450:intron 30.0%
! GATGAATTGATGATACTATG+AGG - tig0027531:18547-18566 Msa1434450:intron 30.0%
! ATGATGGAACTATTTAGAGT+GGG + tig0027531:18840-18859 None:intergenic 30.0%
ACTCTAAATAGTTCCATCAT+GGG - tig0027531:18840-18859 Msa1434450:intron 30.0%
TTGATATGAAGAAGAAGACA+TGG - tig0027531:19003-19022 Msa1434450:intron 30.0%
!!! ATGTTCTTTTCAAGTATGAG+CGG - tig0027531:19069-19088 Msa1434450:intron 30.0%
AAAAAGATCGCAGTTGTTTA+TGG - tig0027531:19163-19182 Msa1434450:intron 30.0%
TTCCTAGAGTCTATAAAGAA+AGG - tig0027531:19443-19462 Msa1434450:intron 30.0%
TTCCTTTCTTTATAGACTCT+AGG + tig0027531:19448-19467 None:intergenic 30.0%
!! TCATGTTCCTTTTTCATGAA+TGG + tig0027531:19753-19772 None:intergenic 30.0%
GGGTATTTCAAAATAAACAG+CGG - tig0027531:19924-19943 Msa1434450:intron 30.0%
GGTATTTCAAAATAAACAGC+GGG - tig0027531:19925-19944 Msa1434450:intron 30.0%
!!! TGCTTTATTTTCCAACTCTA+GGG + tig0027531:20022-20041 None:intergenic 30.0%
AGAGATAATGCAACCAAATT+CGG - tig0027531:20059-20078 Msa1434450:intron 30.0%
ACATCAACTTAAACAAGACA+AGG - tig0027531:20207-20226 Msa1434450:intron 30.0%
! ACAAGGTAATGACAAAGTTT+TGG - tig0027531:20224-20243 Msa1434450:intron 30.0%
AACTAGCAATTTCTCAAGTT+TGG - tig0027531:20935-20954 Msa1434450:intron 30.0%
GTAATTGAACGAGTAGAAAA+TGG + tig0027531:21102-21121 None:intergenic 30.0%
TACAACGCATACATATAGAA+GGG + tig0027531:21390-21409 None:intergenic 30.0%
ATACAACGCATACATATAGA+AGG + tig0027531:21391-21410 None:intergenic 30.0%
!!! TGTTATTTTGACGGAAAATG+TGG + tig0027531:21425-21444 None:intergenic 30.0%
CTACAGTTACATATACAAAG+CGG - tig0027531:21621-21640 Msa1434450:intron 30.0%
!!! GATTTGGTTTTTTTCCTTGT+TGG - tig0027531:21928-21947 Msa1434450:intron 30.0%
!!! TTTGGTTTTTTTCCTTGTTG+GGG - tig0027531:21930-21949 Msa1434450:intron 30.0%
TTGCTTGAATGTGTGAATTT+AGG + tig0027531:22188-22207 None:intergenic 30.0%
CTAAACTTTGCATGTTTGAT+TGG - tig0027531:22305-22324 Msa1434450:intron 30.0%
! GTTTCCTGTTTCTTGTTATA+GGG + tig0027531:22576-22595 None:intergenic 30.0%
! TGTTTCCTGTTTCTTGTTAT+AGG + tig0027531:22577-22596 None:intergenic 30.0%
TCATCTTCCTCTAACAATAT+TGG - tig0027531:22663-22682 Msa1434450:intron 30.0%
GGAATCTCCAATATTAATGA+TGG - tig0027531:22684-22703 Msa1434450:intron 30.0%
CATTAATATGATTCTCAACC+GGG + tig0027531:22827-22846 None:intergenic 30.0%
TAGTGCTTAATGACATGATA+AGG - tig0027531:22853-22872 Msa1434450:intron 30.0%
! ATCAACATTTTCTTGAGGTA+GGG + tig0027531:22925-22944 None:intergenic 30.0%
TATGATAACATCATGACCTA+TGG - tig0027531:22954-22973 Msa1434450:intron 30.0%
! TGACACCAAAATTAAGTTGT+GGG + tig0027531:23067-23086 None:intergenic 30.0%
TTTACTGACGATCAATTTCA+AGG - tig0027531:23179-23198 Msa1434450:intron 30.0%
GTACATTCAAAGTTAATGCA+GGG - tig0027531:23622-23641 Msa1434450:CDS 30.0%
TGATCAAGTGAATGTTCAAG+AGG - tig0027531:14832-14851 Msa1434450:CDS 35.0%
! AATTAAATTGCGGGTCTTGT+TGG + tig0027531:14883-14902 None:intergenic 35.0%
!! CAAGACCCGCAATTTAATTT+TGG - tig0027531:14884-14903 Msa1434450:CDS 35.0%
AAAAGGAATGGAATATCAGC+AGG + tig0027531:14986-15005 None:intergenic 35.0%
ACCCAAAATTTCAAGCACAA+GGG - tig0027531:15060-15079 Msa1434450:intron 35.0%
! ACCCTTGTGCTTGAAATTTT+GGG + tig0027531:15064-15083 None:intergenic 35.0%
! TACCCTTGTGCTTGAAATTT+TGG + tig0027531:15065-15084 None:intergenic 35.0%
!!! GATGTTTGGTTTTCAGGTTT+TGG - tig0027531:15183-15202 Msa1434450:intron 35.0%
AAGGATTCACGAACGTTAAA+GGG + tig0027531:15276-15295 None:intergenic 35.0%
AAAGGATTCACGAACGTTAA+AGG + tig0027531:15277-15296 None:intergenic 35.0%
TTTAACGTTCGTGAATCCTT+TGG - tig0027531:15276-15295 Msa1434450:intron 35.0%
AAAAAAAGAGGATCCACCAT+TGG - tig0027531:15918-15937 Msa1434450:CDS 35.0%
ATATAGATCAAGTCCAATGG+TGG + tig0027531:15934-15953 None:intergenic 35.0%
TGTGAAGTGATAGGAAAAGA+GGG + tig0027531:15966-15985 None:intergenic 35.0%
GGTAAATAGTGTGAAGTGAT+AGG + tig0027531:15975-15994 None:intergenic 35.0%
!!! GACACGCATTTTTTTCAAAC+TGG - tig0027531:16299-16318 Msa1434450:intron 35.0%
GATGAAATGTTTGAGAGTGA+TGG - tig0027531:16458-16477 Msa1434450:intron 35.0%
ACAATTGAGTTATCAGCATG+CGG - tig0027531:16541-16560 Msa1434450:intron 35.0%
TAGTTGAAATGAGCTAACAC+CGG - tig0027531:16592-16611 Msa1434450:intron 35.0%
! TGTTTTCGGCTTTCAAAATG+TGG - tig0027531:16777-16796 Msa1434450:intron 35.0%
TCAAAATGAGGAGGAGATAA+TGG - tig0027531:16877-16896 Msa1434450:intron 35.0%
!!! GCGCGTTTTTGAAACAATTT+TGG - tig0027531:16994-17013 Msa1434450:intron 35.0%
TTACTGAACTCAATCACTTG+CGG - tig0027531:17065-17084 Msa1434450:intron 35.0%
TTGAAGTCTATCTTGAACAG+AGG - tig0027531:17109-17128 Msa1434450:intron 35.0%
TCTTCATCGTTGTTGTATGA+AGG + tig0027531:17169-17188 None:intergenic 35.0%
! CTACTTCAAGAGCATATTCA+AGG - tig0027531:17509-17528 Msa1434450:intron 35.0%
ATCTTTATCAGCAATGACCA+AGG - tig0027531:17619-17638 Msa1434450:intron 35.0%
TGAGTGTTTAGATATAGGGA+CGG - tig0027531:17943-17962 Msa1434450:intron 35.0%
TAGTAATGCTTGCAACATCT+TGG - tig0027531:18376-18395 Msa1434450:intron 35.0%
GTCTTAAGTGTTACACTTTG+TGG - tig0027531:18466-18485 Msa1434450:intron 35.0%
CTTAAGTGTTACACTTTGTG+GGG - tig0027531:18468-18487 Msa1434450:intron 35.0%
TGTTACGCTTATAACAAGGT+AGG - tig0027531:18491-18510 Msa1434450:intron 35.0%
TGATGCCATTGTACAAACAA+TGG - tig0027531:18580-18599 Msa1434450:intron 35.0%
GATGCCATTGTACAAACAAT+GGG - tig0027531:18581-18600 Msa1434450:intron 35.0%
ATGCCATTGTACAAACAATG+GGG - tig0027531:18582-18601 Msa1434450:intron 35.0%
TCCATTAAAGAAGTTGACCA+AGG - tig0027531:18756-18775 Msa1434450:intron 35.0%
TCCTTGGTCAACTTCTTTAA+TGG + tig0027531:18760-18779 None:intergenic 35.0%
! GAACTATTTAGAGTGGGATT+TGG + tig0027531:18834-18853 None:intergenic 35.0%
! CATGATGGAACTATTTAGAG+TGG + tig0027531:18841-18860 None:intergenic 35.0%
CACTCTAAATAGTTCCATCA+TGG - tig0027531:18839-18858 Msa1434450:intron 35.0%
GGGTTTATGTCAGAAGAATT+TGG - tig0027531:18885-18904 Msa1434450:intron 35.0%
AGACATGGAACAGTATAAAG+AGG - tig0027531:19018-19037 Msa1434450:intron 35.0%
ATGGTTTGAGAAATTGCAAG+CGG - tig0027531:19182-19201 Msa1434450:intron 35.0%
ACATGGTGTTTGTGATCTAA+TGG - tig0027531:19226-19245 Msa1434450:intron 35.0%
! TCACTTGAGTTTAAAGCAAG+TGG - tig0027531:19684-19703 Msa1434450:intron 35.0%
! TTGAGTTTAAAGCAAGTGGT+TGG - tig0027531:19688-19707 Msa1434450:intron 35.0%
!! TTTATTTTCCAACTCTAGGG+TGG + tig0027531:20019-20038 None:intergenic 35.0%
!!! CTGCTTTATTTTCCAACTCT+AGG + tig0027531:20023-20042 None:intergenic 35.0%
! ACTAGTTGATGCAAGAACAA+CGG - tig0027531:20432-20451 Msa1434450:intron 35.0%
AAAATGACAGTCGTAGATGA+TGG - tig0027531:20627-20646 Msa1434450:intron 35.0%
! ATACAGGTTTGGAATAAAGG+TGG + tig0027531:20690-20709 None:intergenic 35.0%
! GCTATACAGGTTTGGAATAA+AGG + tig0027531:20693-20712 None:intergenic 35.0%
TTCCAAACCTGTATAGCAAA+CGG - tig0027531:20696-20715 Msa1434450:intron 35.0%
ACGTGTACTAACTTTAACCA+TGG - tig0027531:20906-20925 Msa1434450:intron 35.0%
TACTAACTTTAACCATGGTG+TGG - tig0027531:20911-20930 Msa1434450:intron 35.0%
!! GTTCTTTCTTTAGGGTTTCT+TGG + tig0027531:21055-21074 None:intergenic 35.0%
CTACTTTCCCTTTACTTCAT+TGG - tig0027531:21305-21324 Msa1434450:intron 35.0%
CACATCACCAATGAAGTAAA+GGG + tig0027531:21315-21334 None:intergenic 35.0%
ACACATCACCAATGAAGTAA+AGG + tig0027531:21316-21335 None:intergenic 35.0%
CTTACACTGAAGAAAATTGC+TGG + tig0027531:21595-21614 None:intergenic 35.0%
! AGATCGATAGTTGATGTACT+GGG + tig0027531:21660-21679 None:intergenic 35.0%
ATGCAGAAGATTCTGATTGT+TGG + tig0027531:21750-21769 None:intergenic 35.0%
AACAATCAGAATCTTCTGCA+TGG - tig0027531:21749-21768 Msa1434450:intron 35.0%
AAACCATTGAAGAGAGAAGA+GGG + tig0027531:21782-21801 None:intergenic 35.0%
!!! TTGGTTTTTTTCCTTGTTGG+GGG - tig0027531:21931-21950 Msa1434450:intron 35.0%
TCATTACACTGTATGAACCA+TGG + tig0027531:22259-22278 None:intergenic 35.0%
!! TATAGATGGCTTTGAGAATG+CGG + tig0027531:22416-22435 None:intergenic 35.0%
TCAAAGCCATCTATAACTCA+GGG - tig0027531:22421-22440 Msa1434450:intron 35.0%
TTCTTAATCTCATCTCTACG+TGG + tig0027531:22456-22475 None:intergenic 35.0%
GATGAGATTAAGAAGATACG+TGG - tig0027531:22462-22481 Msa1434450:intron 35.0%
CGTGGACAATTAGAAGAATT+TGG - tig0027531:22480-22499 Msa1434450:intron 35.0%
TTAGAAGAATTTGGACCGAT+TGG - tig0027531:22489-22508 Msa1434450:intron 35.0%
TTGAAACCAATAAAAGACGC+TGG + tig0027531:22520-22539 None:intergenic 35.0%
! CTTGTTATAGGGTACTTTGT+TGG + tig0027531:22565-22584 None:intergenic 35.0%
AGTACCCTATAACAAGAAAC+AGG - tig0027531:22569-22588 Msa1434450:intron 35.0%
GGAGATTCCAATATTGTTAG+AGG + tig0027531:22673-22692 None:intergenic 35.0%
! CTCCAATATTAATGATGGGA+CGG - tig0027531:22689-22708 Msa1434450:intron 35.0%
! GATCAACATTTTCTTGAGGT+AGG + tig0027531:22926-22945 None:intergenic 35.0%
! AGCAGATCAACATTTTCTTG+AGG + tig0027531:22930-22949 None:intergenic 35.0%
AACATCATGACCTATGGAAA+TGG - tig0027531:22960-22979 Msa1434450:intron 35.0%
! AATTAAGTTGTGGGTCTTGT+TGG + tig0027531:23058-23077 None:intergenic 35.0%
! CAAGACCCACAACTTAATTT+TGG - tig0027531:23059-23078 Msa1434450:intron 35.0%
! GTGACACCAAAATTAAGTTG+TGG + tig0027531:23068-23087 None:intergenic 35.0%
AAAGAGGAATGGAACATCAT+GGG + tig0027531:23162-23181 None:intergenic 35.0%
TAAAGAGGAATGGAACATCA+TGG + tig0027531:23163-23182 None:intergenic 35.0%
GAAATTGATCGTCAGTAAAG+AGG + tig0027531:23178-23197 None:intergenic 35.0%
! TACCCGGTGCTTTATATTTT+GGG + tig0027531:23439-23458 None:intergenic 35.0%
! ATACCCGGTGCTTTATATTT+TGG + tig0027531:23440-23459 None:intergenic 35.0%
AATTGTTGTGTGTGTTTCTC+AGG - tig0027531:23549-23568 Msa1434450:CDS 35.0%
TGTAGGGTGATTACTATCAA+CGG - tig0027531:23600-23619 Msa1434450:CDS 35.0%
GGTACATTCAAAGTTAATGC+AGG - tig0027531:23621-23640 Msa1434450:CDS 35.0%
GTGCATGTGCATCATATTCA+TGG + tig0027531:14861-14880 None:intergenic 40.0%
CACCCAAAATTTCAAGCACA+AGG - tig0027531:15059-15078 Msa1434450:intron 40.0%
!!! TTGGTTTTCAGGTTTTGGTG+AGG - tig0027531:15188-15207 Msa1434450:intron 40.0%
GTTAACCTCGATTACTTCGT+TGG + tig0027531:15247-15266 None:intergenic 40.0%
AAGTAATCGAGGTTAACGCA+GGG - tig0027531:15250-15269 Msa1434450:intron 40.0%
CAGAACTGCTCTATTACCAA+AGG + tig0027531:15295-15314 None:intergenic 40.0%
TGAGTGAACAACAGTTGCTT+AGG - tig0027531:15494-15513 Msa1434450:CDS 40.0%
TGAAGTGATAGGAAAAGAGG+GGG + tig0027531:15964-15983 None:intergenic 40.0%
GTGAAGTGATAGGAAAAGAG+GGG + tig0027531:15965-15984 None:intergenic 40.0%
GTGTGAAGTGATAGGAAAAG+AGG + tig0027531:15967-15986 None:intergenic 40.0%
TTATCAGCATGCGGTTGAAT+TGG - tig0027531:16550-16569 Msa1434450:intron 40.0%
GCGTGTTAGGATTAAGAGTT+TGG - tig0027531:16707-16726 Msa1434450:intron 40.0%
TTCGGCTTTCAAAATGTGGA+CGG - tig0027531:16781-16800 Msa1434450:intron 40.0%
!! ATGAGGAGGAGATAATGGAA+CGG - tig0027531:16882-16901 Msa1434450:intron 40.0%
TGTTTAGATATAGGGACGGA+GGG - tig0027531:17947-17966 Msa1434450:intron 40.0%
AAGTAAACTCTTGATCCGAG+TGG - tig0027531:17989-18008 Msa1434450:intron 40.0%
! TTCTAGTTGTTAGACAGGGT+TGG - tig0027531:18139-18158 Msa1434450:intron 40.0%
! ATTGATGATACTATGAGGGC+TGG - tig0027531:18552-18571 Msa1434450:intron 40.0%
ACACCCCATTGTTTGTACAA+TGG + tig0027531:18588-18607 None:intergenic 40.0%
! ATTTAGAGTGGGATTTGGCT+AGG + tig0027531:18829-18848 None:intergenic 40.0%
CAAGTGTACCATATGCGATA+GGG - tig0027531:18865-18884 Msa1434450:intron 40.0%
GACATAAACCCTATCGCATA+TGG + tig0027531:18876-18895 None:intergenic 40.0%
GAAGTCATGAAGTGATGCTA+AGG - tig0027531:19046-19065 Msa1434450:intron 40.0%
TGGTGTTTGTGATCTAATGG+CGG - tig0027531:19229-19248 Msa1434450:intron 40.0%
TGTTAGGGATGTGGAAGTTT+GGG + tig0027531:19281-19300 None:intergenic 40.0%
GTGAGACATAAAACTGCTTC+AGG + tig0027531:19419-19438 None:intergenic 40.0%
!! TGACATGCAATTTGATAGCG+CGG + tig0027531:20145-20164 None:intergenic 40.0%
GTTTGCACTCAGCTTTACAA+TGG + tig0027531:20173-20192 None:intergenic 40.0%
! CTCTGATGGTACTTTTGTTC+TGG + tig0027531:20250-20269 None:intergenic 40.0%
ATCTGTGTTCATGACTCTGA+TGG + tig0027531:20264-20283 None:intergenic 40.0%
! CTAGTTGATGCAAGAACAAC+GGG - tig0027531:20433-20452 Msa1434450:intron 40.0%
! TATGGTCACTGATTGACAGT+TGG + tig0027531:20469-20488 None:intergenic 40.0%
GTCAATCAGTGACCATATTC+CGG - tig0027531:20472-20491 Msa1434450:intron 40.0%
TCAATCAGTGACCATATTCC+GGG - tig0027531:20473-20492 Msa1434450:intron 40.0%
! CAACTGTAATGTGGAGCATT+TGG + tig0027531:20563-20582 None:intergenic 40.0%
AACGTCTGACAACTGTAATG+TGG + tig0027531:20572-20591 None:intergenic 40.0%
TTGGAATAAAGGTGGCCTAT+GGG + tig0027531:20682-20701 None:intergenic 40.0%
! TTTGGAATAAAGGTGGCCTA+TGG + tig0027531:20683-20702 None:intergenic 40.0%
AATTGCTAGTTACCACACCA+TGG + tig0027531:20926-20945 None:intergenic 40.0%
TGAACGAGTAGAAAATGGGA+GGG + tig0027531:21097-21116 None:intergenic 40.0%
TTGAACGAGTAGAAAATGGG+AGG + tig0027531:21098-21117 None:intergenic 40.0%
TTTCACGCAAGTATGATCGA+TGG + tig0027531:21176-21195 None:intergenic 40.0%
GCAAGTAAAGCTGACAAACA+TGG - tig0027531:21241-21260 Msa1434450:intron 40.0%
! CAGATCGATAGTTGATGTAC+TGG + tig0027531:21661-21680 None:intergenic 40.0%
CATCAACTATCGATCTGTGA+TGG - tig0027531:21664-21683 Msa1434450:intron 40.0%
GACCAATGTACTTTCTTCGA+GGG + tig0027531:21692-21711 None:intergenic 40.0%
TGACCAATGTACTTTCTTCG+AGG + tig0027531:21693-21712 None:intergenic 40.0%
! AGAAAGTACATTGGTCAGAC+AGG - tig0027531:21696-21715 Msa1434450:intron 40.0%
AACCATTGAAGAGAGAAGAG+GGG + tig0027531:21781-21800 None:intergenic 40.0%
GAAACCATTGAAGAGAGAAG+AGG + tig0027531:21783-21802 None:intergenic 40.0%
AGCAAATATGGTCAGACCAT+TGG + tig0027531:22126-22145 None:intergenic 40.0%
GATGATGAAGAAAGAACTCC+TGG - tig0027531:22354-22373 Msa1434450:intron 40.0%
CTCAAAGCCATCTATAACTC+AGG - tig0027531:22420-22439 Msa1434450:intron 40.0%
! GTGATTCCAGCGTCTTTTAT+TGG - tig0027531:22511-22530 Msa1434450:intron 40.0%
! GATGATGAAGATGAGTTGAG+TGG + tig0027531:22648-22667 None:intergenic 40.0%
CACCGTCCCATCATTAATAT+TGG + tig0027531:22694-22713 None:intergenic 40.0%
! TATTAATGATGGGACGGTGA+TGG - tig0027531:22695-22714 Msa1434450:intron 40.0%
AGAGAGATTGCAGGTGAATT+AGG + tig0027531:22723-22742 None:intergenic 40.0%
! GATAAGTACCACCTTGGTTT+TGG + tig0027531:22749-22768 None:intergenic 40.0%
TAATGACATGATAAGGCCAG+AGG - tig0027531:22860-22879 Msa1434450:intron 40.0%
AATGACATGATAAGGCCAGA+GGG - tig0027531:22861-22880 Msa1434450:intron 40.0%
GAGAAGTAATTAAACCCCTC+TGG + tig0027531:22879-22898 None:intergenic 40.0%
! GGTAGGGATTGACTCATATT+TGG + tig0027531:22909-22928 None:intergenic 40.0%
TGAGCAGTTTCCATTTCCAT+AGG + tig0027531:22973-22992 None:intergenic 40.0%
AAGAGGAATGGAACATCATG+GGG + tig0027531:23161-23180 None:intergenic 40.0%
TGATCGTCAGTAAAGAGGAA+TGG + tig0027531:23173-23192 None:intergenic 40.0%
!! TTTTCAGGAAGTGACTAGCT+AGG + tig0027531:23354-23373 None:intergenic 40.0%
GCTAGTCACTTCCTGAAAAA+CGG - tig0027531:23355-23374 Msa1434450:intron 40.0%
!! GTCTAAACCTTCCGTTTTTC+AGG + tig0027531:23369-23388 None:intergenic 40.0%
! ACCCGGTGCTTTATATTTTG+GGG + tig0027531:23438-23457 None:intergenic 40.0%
! TGTGTGTGTTTCTCAGGTTT+TGG - tig0027531:23555-23574 Msa1434450:CDS 40.0%
ACGATGGTACAGCAAAATGT+AGG - tig0027531:23583-23602 Msa1434450:CDS 40.0%
CGATGGTACAGCAAAATGTA+GGG - tig0027531:23584-23603 Msa1434450:CDS 40.0%
GTTCGTAAATTCTTTGGCGA+TGG - tig0027531:23654-23673 Msa1434450:CDS 40.0%
TGCACATTGCACACGTCTAT+GGG + tig0027531:15106-15125 None:intergenic 45.0%
ATGCACATTGCACACGTCTA+TGG + tig0027531:15107-15126 None:intergenic 45.0%
ATAGACGTGTGCAATGTGCA+TGG - tig0027531:15106-15125 Msa1434450:intron 45.0%
!! TCAGGTTTTGGTGAGGAAGA+TGG - tig0027531:15195-15214 Msa1434450:intron 45.0%
TACTGCCAACGAAGTAATCG+AGG - tig0027531:15239-15258 Msa1434450:intron 45.0%
GAAGTAATCGAGGTTAACGC+AGG - tig0027531:15249-15268 Msa1434450:intron 45.0%
! TCCATGGTAGAGTGAGTTGA+GGG + tig0027531:15364-15383 None:intergenic 45.0%
CCACGTAATAATCAGCTCCA+TGG + tig0027531:15380-15399 None:intergenic 45.0%
CCATGGAGCTGATTATTACG+TGG - tig0027531:15377-15396 Msa1434450:intron 45.0%
TCGGCTTTCAAAATGTGGAC+GGG - tig0027531:16782-16801 Msa1434450:intron 45.0%
!! AGGAGATAATGGAACGGCTA+GGG - tig0027531:16888-16907 Msa1434450:intron 45.0%
TTGCAGTTGCTGAACTTCAG+AGG - tig0027531:17209-17228 Msa1434450:intron 45.0%
CTGAACTTCAGAGGAGGATA+CGG - tig0027531:17218-17237 Msa1434450:intron 45.0%
ACGTTGCTTCTTCGTGATGA+TGG - tig0027531:17247-17266 Msa1434450:intron 45.0%
CGTTGCTTCTTCGTGATGAT+GGG - tig0027531:17248-17267 Msa1434450:intron 45.0%
GCAAAGGGGGGTTACATTAA+GGG + tig0027531:17702-17721 None:intergenic 45.0%
TGCAAAGGGGGGTTACATTA+AGG + tig0027531:17703-17722 None:intergenic 45.0%
GTGTTTAGATATAGGGACGG+AGG - tig0027531:17946-17965 Msa1434450:intron 45.0%
! GGGGTGTTACGCTTATAACA+AGG - tig0027531:18487-18506 Msa1434450:intron 45.0%
CTATCGGATGCTACACTTAG+TGG - tig0027531:18715-18734 Msa1434450:intron 45.0%
CCTATCGCATATGGTACACT+TGG + tig0027531:18867-18886 None:intergenic 45.0%
CCAAGTGTACCATATGCGAT+AGG - tig0027531:18864-18883 Msa1434450:intron 45.0%
AATTGCAAGCGGATGTCAAG+AGG - tig0027531:19193-19212 Msa1434450:intron 45.0%
GTGTTAGGGATGTGGAAGTT+TGG + tig0027531:19282-19301 None:intergenic 45.0%
!! GTCGTTTCTAGCTGGTGTTA+GGG + tig0027531:19296-19315 None:intergenic 45.0%
!! TGTCGTTTCTAGCTGGTGTT+AGG + tig0027531:19297-19316 None:intergenic 45.0%
ACACCAGCTAGAAACGACAA+TGG - tig0027531:19298-19317 Msa1434450:intron 45.0%
AGTCTTGATCCTATGCATGC+TGG - tig0027531:19349-19368 Msa1434450:intron 45.0%
GTCTTGATCCTATGCATGCT+GGG - tig0027531:19350-19369 Msa1434450:intron 45.0%
! AAGAGCATGAGCAACCTCAT+TGG - tig0027531:19975-19994 Msa1434450:intron 45.0%
!! ACTCTAGGGTGGAGTTTGTT+AGG + tig0027531:20008-20027 None:intergenic 45.0%
AACAAACTCCACCCTAGAGT+TGG - tig0027531:20008-20027 Msa1434450:intron 45.0%
AGGAACGACACATCCGAATT+TGG + tig0027531:20075-20094 None:intergenic 45.0%
GTCGTTCCTGTCAGAAAGAA+AGG - tig0027531:20086-20105 Msa1434450:intron 45.0%
CTGATGCCTTTCTTTCTGAC+AGG + tig0027531:20095-20114 None:intergenic 45.0%
!! TGATAGCGCGGCTTTTGAAA+CGG + tig0027531:20133-20152 None:intergenic 45.0%
CACAGATGCCAATACCTCTT+CGG - tig0027531:20277-20296 Msa1434450:intron 45.0%
CATTTATATCTCCCCGCCAT+AGG - tig0027531:20333-20352 Msa1434450:intron 45.0%
TGTCACAGAAACCAGCACTA+TGG + tig0027531:20511-20530 None:intergenic 45.0%
CTTCCCAAACTCGAAGATTG+CGG - tig0027531:20532-20551 Msa1434450:intron 45.0%
! ACACCGCAATCTTCGAGTTT+GGG + tig0027531:20538-20557 None:intergenic 45.0%
! AACACCGCAATCTTCGAGTT+TGG + tig0027531:20539-20558 None:intergenic 45.0%
CGTGTTGAATAGAACCCCAT+AGG - tig0027531:20664-20683 Msa1434450:intron 45.0%
TGGAATAAAGGTGGCCTATG+GGG + tig0027531:20681-20700 None:intergenic 45.0%
!! GTCCGTTTGCTATACAGGTT+TGG + tig0027531:20701-20720 None:intergenic 45.0%
!! CTCTTGTCCGTTTGCTATAC+AGG + tig0027531:20706-20725 None:intergenic 45.0%
!! GGTTTCTTGGATTGACTCGA+GGG + tig0027531:21042-21061 None:intergenic 45.0%
TCGATGGAAGAGAAGAGAAG+AGG + tig0027531:21160-21179 None:intergenic 45.0%
GGATGAATCGATGGAAGAGA+AGG + tig0027531:21540-21559 None:intergenic 45.0%
!! AGCAATGGTGGATGAATCGA+TGG + tig0027531:21549-21568 None:intergenic 45.0%
! CTCCCTCGAAGAAAGTACAT+TGG - tig0027531:21687-21706 Msa1434450:intron 45.0%
CGTTTATATGACCCCCAACA+AGG + tig0027531:21945-21964 None:intergenic 45.0%
AAGAAAGAACTCCTGGACCA+AGG - tig0027531:22361-22380 Msa1434450:intron 45.0%
! TTGAGAATGCGGATTTGCTC+AGG + tig0027531:22405-22424 None:intergenic 45.0%
CGTCATCCCTGAGTTATAGA+TGG + tig0027531:22430-22449 None:intergenic 45.0%
AAGACGCTGGAATCACCAAT+CGG + tig0027531:22507-22526 None:intergenic 45.0%
ATTTGTGGGAGAGAGCTATC+TGG + tig0027531:22615-22634 None:intergenic 45.0%
! GATGAAGATGAGTTGAGTGG+TGG + tig0027531:22645-22664 None:intergenic 45.0%
!!! TTTTGGCTCAGAGAGATTGC+AGG + tig0027531:22732-22751 None:intergenic 45.0%
ATCTCTCTGAGCCAAAACCA+AGG - tig0027531:22735-22754 Msa1434450:intron 45.0%
TGTGAGGATAAGTACCACCT+TGG + tig0027531:22755-22774 None:intergenic 45.0%
! AAAGAGGAAAACGAGGGTGT+AGG + tig0027531:22804-22823 None:intergenic 45.0%
ATGATTCTCAACCGGGAAAG+AGG + tig0027531:22820-22839 None:intergenic 45.0%
ATGACATGATAAGGCCAGAG+GGG - tig0027531:22862-22881 Msa1434450:intron 45.0%
ATGGGGTGCACTATTGTCAA+TGG + tig0027531:23144-23163 None:intergenic 45.0%
GTCACTTCCTGAAAAACGGA+AGG - tig0027531:23359-23378 Msa1434450:intron 45.0%
!! CCGGTGCTTTATATTTTGGG+GGG + tig0027531:23436-23455 None:intergenic 45.0%
CCCCCCAAAATATAAAGCAC+CGG - tig0027531:23433-23452 Msa1434450:intron 45.0%
!! CCCGGTGCTTTATATTTTGG+GGG + tig0027531:23437-23456 None:intergenic 45.0%
! CCCCCAAAATATAAAGCACC+GGG - tig0027531:23434-23453 Msa1434450:intron 45.0%
!! GTGTTTCTCAGGTTTTGGTG+AGG - tig0027531:23560-23579 Msa1434450:CDS 45.0%
!! TAATAATAATAATAATTAGA+AGG + tig0027531:21815-21834 None:intergenic 5.0%
TGATCTTGCTCCTCTACCTC+CGG - tig0027531:14943-14962 Msa1434450:CDS 50.0%
AGCAGGTGCACTCATGTCAA+TGG + tig0027531:14969-14988 None:intergenic 50.0%
GTTTGACTCCTTCTGTACCC+CGG - tig0027531:15314-15333 Msa1434450:intron 50.0%
! CCATTCATCGGTTAGAACCG+GGG + tig0027531:15334-15353 None:intergenic 50.0%
! CCCATTCATCGGTTAGAACC+GGG + tig0027531:15335-15354 None:intergenic 50.0%
! CCCGGTTCTAACCGATGAAT+GGG - tig0027531:15332-15351 Msa1434450:intron 50.0%
! CCCCATTCATCGGTTAGAAC+CGG + tig0027531:15336-15355 None:intergenic 50.0%
! CCGGTTCTAACCGATGAATG+GGG - tig0027531:15333-15352 Msa1434450:intron 50.0%
ACCCTCAACTCACTCTACCA+TGG - tig0027531:15360-15379 Msa1434450:intron 50.0%
CTCCATGGTAGAGTGAGTTG+AGG + tig0027531:15365-15384 None:intergenic 50.0%
!! GAGGAGATAATGGAACGGCT+AGG - tig0027531:16887-16906 Msa1434450:intron 50.0%
CAGTTGCTGAACTTCAGAGG+AGG - tig0027531:17212-17231 Msa1434450:intron 50.0%
AACTTCAGAGGAGGATACGG+AGG - tig0027531:17221-17240 Msa1434450:intron 50.0%
ACTTCAGAGGAGGATACGGA+GGG - tig0027531:17222-17241 Msa1434450:intron 50.0%
GGGTTACATTAAGGGACGGA+GGG + tig0027531:17694-17713 None:intergenic 50.0%
AGGGGGGTTACATTAAGGGA+CGG + tig0027531:17698-17717 None:intergenic 50.0%
TGGTACACTTGGACCCATGA+TGG + tig0027531:18856-18875 None:intergenic 50.0%
GGATGTCAAGAGGTCTGCAA+AGG - tig0027531:19203-19222 Msa1434450:intron 50.0%
CAAGAGGTCTGCAAAGGACA+TGG - tig0027531:19209-19228 Msa1434450:intron 50.0%
!! AATGGCGGATGACATTTGCG+AGG - tig0027531:19244-19263 Msa1434450:intron 50.0%
! TCTAGCTGGTGTTAGGGATG+TGG + tig0027531:19290-19309 None:intergenic 50.0%
TCATGATGCCCAGCATGCAT+AGG + tig0027531:19361-19380 None:intergenic 50.0%
TGTTAGGCGACAAGCCAATG+AGG + tig0027531:19992-20011 None:intergenic 50.0%
GTTGATGTGCGTGAAGCTCT+TGG + tig0027531:20195-20214 None:intergenic 50.0%
TGCCAATACCTCTTCGGTTG+AGG - tig0027531:20283-20302 Msa1434450:intron 50.0%
GCCAATACCTCTTCGGTTGA+GGG - tig0027531:20284-20303 Msa1434450:intron 50.0%
! TCCCTCAACCGAAGAGGTAT+TGG + tig0027531:20288-20307 None:intergenic 50.0%
AATACCTCTTCGGTTGAGGG+AGG - tig0027531:20287-20306 Msa1434450:intron 50.0%
TTATATCTCCCCGCCATAGG+AGG - tig0027531:20336-20355 Msa1434450:intron 50.0%
CCTCACCTAATGGTCGAAAG+TGG + tig0027531:20365-20384 None:intergenic 50.0%
CCACTTTCGACCATTAGGTG+AGG - tig0027531:20362-20381 Msa1434450:intron 50.0%
! AGTCGTCATTGCCACTTGAG+GGG + tig0027531:20405-20424 None:intergenic 50.0%
! CAGTCGTCATTGCCACTTGA+GGG + tig0027531:20406-20425 None:intergenic 50.0%
TCATTCCACCACCATAGTGC+TGG - tig0027531:20497-20516 Msa1434450:intron 50.0%
AGAAACCAGCACTATGGTGG+TGG + tig0027531:20505-20524 None:intergenic 50.0%
CACAGAAACCAGCACTATGG+TGG + tig0027531:20508-20527 None:intergenic 50.0%
TTCATGATCTGATGCGCAGC+TGG - tig0027531:20746-20765 Msa1434450:intron 50.0%
!! GGGTTTCTTGGATTGACTCG+AGG + tig0027531:21043-21062 None:intergenic 50.0%
AGTAGAAAATGGGAGGGTGG+AGG + tig0027531:21091-21110 None:intergenic 50.0%
ACGAGTAGAAAATGGGAGGG+TGG + tig0027531:21094-21113 None:intergenic 50.0%
CTCCCCTCTTCTCTCTTCAA+TGG - tig0027531:21776-21795 Msa1434450:intron 50.0%
! TTTGGGATCCATCTTGGCCT+TGG + tig0027531:22381-22400 None:intergenic 50.0%
!! TCAGGCTTTGGGATCCATCT+TGG + tig0027531:22387-22406 None:intergenic 50.0%
! TGCGGATTTGCTCAGGCTTT+GGG + tig0027531:22398-22417 None:intergenic 50.0%
! ATGCGGATTTGCTCAGGCTT+TGG + tig0027531:22399-22418 None:intergenic 50.0%
! GTGGTGGTGTGGTGATTTGT+GGG + tig0027531:22629-22648 None:intergenic 50.0%
! AGTGGTGGTGTGGTGATTTG+TGG + tig0027531:22630-22649 None:intergenic 50.0%
! AGATGAGTTGAGTGGTGGTG+TGG + tig0027531:22640-22659 None:intergenic 50.0%
TCTCTGAGCCAAAACCAAGG+TGG - tig0027531:22738-22757 Msa1434450:intron 50.0%
ACTTATCCTCACACCCTCAC+TGG - tig0027531:22762-22781 Msa1434450:intron 50.0%
! TTGTAGACCGGTTCCAGTGA+GGG + tig0027531:22778-22797 None:intergenic 50.0%
GGGTGTAGGTAGTTGTAGAC+CGG + tig0027531:22790-22809 None:intergenic 50.0%
! ACCCTCGTTTTCCTCTTTCC+CGG - tig0027531:22806-22825 Msa1434450:intron 50.0%
ACCGGGAAAGAGGAAAACGA+GGG + tig0027531:22810-22829 None:intergenic 50.0%
AACCGGGAAAGAGGAAAACG+AGG + tig0027531:22811-22830 None:intergenic 50.0%
CACTATTGTCAATGGCCGGA+GGG + tig0027531:23136-23155 None:intergenic 50.0%
GGTGCACTATTGTCAATGGC+CGG + tig0027531:23140-23159 None:intergenic 50.0%
!! TCAGGTTTTGGTGAGGACGA+TGG - tig0027531:23567-23586 Msa1434450:CDS 50.0%
GCAGTTCTACTTGACTCCTC+CGG - tig0027531:23678-23697 Msa1434450:CDS 50.0%
GGAAATAATCAGCCCCATGG+TGG + tig0027531:23749-23768 None:intergenic 50.0%
ATGTCAATGGCCGGAGGTAG+AGG + tig0027531:14956-14975 None:intergenic 55.0%
GGTGCACTCATGTCAATGGC+CGG + tig0027531:14965-14984 None:intergenic 55.0%
GGTTAGAACCGGGGTACAGA+AGG + tig0027531:15325-15344 None:intergenic 55.0%
! CCCCGGTTCTAACCGATGAA+TGG - tig0027531:15331-15350 Msa1434450:intron 55.0%
GAGGGTGACACCCCATTCAT+CGG + tig0027531:15346-15365 None:intergenic 55.0%
GGGGTTACATTAAGGGACGG+AGG + tig0027531:17695-17714 None:intergenic 55.0%
GGACGGAGGGAGTAGATCTT+AGG - tig0027531:17960-17979 Msa1434450:intron 55.0%
GGAGCTTCTATGGTGCAGTC+AGG - tig0027531:18260-18279 Msa1434450:intron 55.0%
!! GCGCCATTGTCGTTTCTAGC+TGG + tig0027531:19304-19323 None:intergenic 55.0%
AAAGTGGCAGCCTCCTATGG+CGG + tig0027531:20349-20368 None:intergenic 55.0%
TCGAAAGTGGCAGCCTCCTA+TGG + tig0027531:20352-20371 None:intergenic 55.0%
!! GGCTGCCACTTTCGACCATT+AGG - tig0027531:20357-20376 Msa1434450:intron 55.0%
ACCATTAGGTGAGGCCGAAG+TGG - tig0027531:20371-20390 Msa1434450:intron 55.0%
TCCACTTCGGCCTCACCTAA+TGG + tig0027531:20375-20394 None:intergenic 55.0%
TTAGGTGAGGCCGAAGTGGA+AGG - tig0027531:20375-20394 Msa1434450:intron 55.0%
! TCGTCATTGCCACTTGAGGG+GGG + tig0027531:20403-20422 None:intergenic 55.0%
! GTCGTCATTGCCACTTGAGG+GGG + tig0027531:20404-20423 None:intergenic 55.0%
! CCAGTCGTCATTGCCACTTG+AGG + tig0027531:20407-20426 None:intergenic 55.0%
CCTCAAGTGGCAATGACGAC+TGG - tig0027531:20404-20423 Msa1434450:intron 55.0%
GGTGGAATGAGCCCGGAATA+TGG + tig0027531:20487-20506 None:intergenic 55.0%
!! CTATGGTGGTGGAATGAGCC+CGG + tig0027531:20494-20513 None:intergenic 55.0%
AGTGTGCGTGCTAGCAATGG+TGG + tig0027531:21561-21580 None:intergenic 55.0%
GCAAGTGTGCGTGCTAGCAA+TGG + tig0027531:21564-21583 None:intergenic 55.0%
!! ATCCATCTTGGCCTTGGTCC+AGG + tig0027531:22375-22394 None:intergenic 55.0%
! GTTGTAGACCGGTTCCAGTG+AGG + tig0027531:22779-22798 None:intergenic 55.0%
TGATCTTGCTCCTCTCCCTC+CGG - tig0027531:23118-23137 Msa1434450:intron 55.0%
GCACTATTGTCAATGGCCGG+AGG + tig0027531:23137-23156 None:intergenic 55.0%
ATCGGTTAGAACCGGGACAC+CGG + tig0027531:23700-23719 None:intergenic 55.0%
! TCCCGGTTCTAACCGATGAG+TGG - tig0027531:23703-23722 Msa1434450:CDS 55.0%
! CCCACTCATCGGTTAGAACC+GGG + tig0027531:23707-23726 None:intergenic 55.0%
! CCCGGTTCTAACCGATGAGT+GGG - tig0027531:23704-23723 Msa1434450:CDS 55.0%
! CCCCACTCATCGGTTAGAAC+CGG + tig0027531:23708-23727 None:intergenic 55.0%
! CCGGTTCTAACCGATGAGTG+GGG - tig0027531:23705-23724 Msa1434450:CDS 55.0%
ACCCTCAACTCACTCCACCA+TGG - tig0027531:23732-23751 Msa1434450:CDS 55.0%
! CCCATGGTGGAGTGAGTTGA+GGG + tig0027531:23736-23755 None:intergenic 55.0%
CCCTCAACTCACTCCACCAT+GGG - tig0027531:23733-23752 Msa1434450:CDS 55.0%
CCTCAACTCACTCCACCATG+GGG - tig0027531:23734-23753 Msa1434450:CDS 55.0%
GCACTCATGTCAATGGCCGG+AGG + tig0027531:14962-14981 None:intergenic 60.0%
AGCGGGACTACCTAGCAACG+TGG - tig0027531:19942-19961 Msa1434450:intron 60.0%
GCACGAGAAGCCACGTTGCT+AGG + tig0027531:19955-19974 None:intergenic 60.0%
ACCTCTTCGGTTGAGGGAGG+CGG - tig0027531:20290-20309 Msa1434450:intron 60.0%
GTTGAGGGAGGCGGAGAAAG+CGG - tig0027531:20299-20318 Msa1434450:intron 60.0%
AAGTGGCAGCCTCCTATGGC+GGG + tig0027531:20348-20367 None:intergenic 60.0%
! CGTCATTGCCACTTGAGGGG+GGG + tig0027531:20402-20421 None:intergenic 60.0%
TGATGCGCAGCTGGCGCAAT+TGG - tig0027531:20755-20774 Msa1434450:intron 60.0%
CTCCTGGACCAAGGCCAAGA+TGG - tig0027531:22370-22389 Msa1434450:intron 60.0%
CCTCACACCCTCACTGGAAC+CGG - tig0027531:22768-22787 Msa1434450:intron 60.0%
TTGTCAATGGCCGGAGGGAG+AGG + tig0027531:23131-23150 None:intergenic 60.0%
ACTTGACTCCTCCGGTGTCC+CGG - tig0027531:23686-23705 Msa1434450:CDS 60.0%
GAGGGTGACACCCCACTCAT+CGG + tig0027531:23718-23737 None:intergenic 60.0%
! CCCCATGGTGGAGTGAGTTG+AGG + tig0027531:23737-23756 None:intergenic 60.0%
TCCGCCTCCCTCAACCGAAG+AGG + tig0027531:20294-20313 None:intergenic 65.0%
AGTGGCAGCCTCCTATGGCG+GGG + tig0027531:20347-20366 None:intergenic 65.0%
GAGGGGGGGACCTTCCACTT+CGG + tig0027531:20388-20407 None:intergenic 65.0%
TGGAAGGTCCCCCCCTCAAG+TGG - tig0027531:20391-20410 Msa1434450:intron 65.0%
GCGCAGCTGGCGCAATTGGT+AGG - tig0027531:20759-20778 Msa1434450:intron 65.0%
! CCGGTTCCAGTGAGGGTGTG+AGG + tig0027531:22771-22790 None:intergenic 65.0%
GGTTAGAACCGGGACACCGG+AGG + tig0027531:23697-23716 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0027531 gene 14785 23770 14785 ID=Msa1434450;Name=Msa1434450
tig0027531 mRNA 14785 23770 14785 ID=Msa1434450-mRNA-1;Parent=Msa1434450;Name=Msa1434450-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|0|0|1|0.4|0.16|6|0|425
tig0027531 exon 23530 23770 23530 ID=Msa1434450-mRNA-1:exon:9225;Parent=Msa1434450-mRNA-1
tig0027531 exon 23201 23356 23201 ID=Msa1434450-mRNA-1:exon:9224;Parent=Msa1434450-mRNA-1
tig0027531 exon 16008 16206 16008 ID=Msa1434450-mRNA-1:exon:9223;Parent=Msa1434450-mRNA-1
tig0027531 exon 15766 16001 15766 ID=Msa1434450-mRNA-1:exon:9222;Parent=Msa1434450-mRNA-1
tig0027531 exon 15457 15699 15457 ID=Msa1434450-mRNA-1:exon:9221;Parent=Msa1434450-mRNA-1
tig0027531 exon 14785 14984 14785 ID=Msa1434450-mRNA-1:exon:9220;Parent=Msa1434450-mRNA-1
tig0027531 CDS 23530 23770 23530 ID=Msa1434450-mRNA-1:cds;Parent=Msa1434450-mRNA-1
tig0027531 CDS 23201 23356 23201 ID=Msa1434450-mRNA-1:cds;Parent=Msa1434450-mRNA-1
tig0027531 CDS 16008 16206 16008 ID=Msa1434450-mRNA-1:cds;Parent=Msa1434450-mRNA-1
tig0027531 CDS 15766 16001 15766 ID=Msa1434450-mRNA-1:cds;Parent=Msa1434450-mRNA-1
tig0027531 CDS 15457 15699 15457 ID=Msa1434450-mRNA-1:cds;Parent=Msa1434450-mRNA-1
tig0027531 CDS 14785 14984 14785 ID=Msa1434450-mRNA-1:cds;Parent=Msa1434450-mRNA-1
Gene Sequence

>Msa1434450

ATGAACAATGAAAATGAAAATGGAATCTGCTCAACCAATGATCTTTTTGATCAAGTGAATGTTCAAGAGGAAGCCATGAATATGATGCACATGCACCAACAAGACCCGCAATTTAATTTTGGTGTCACAACAACATCAAGTAATGATGATCATTCAACTGATCTTGCTCCTCTACCTCCGGCCATTGACATGAGTGCACCTGCTGATATTCCATTCCTTTTTACTGATGATCAACTTCAAGGTTTTGGTGAGGAAGATGGTCTGAGAAAATGTAGAATTTTTACTGCCAACGAAGTAATCGAGGTTAACGCAGGGCCCTTTAACGTTCGTGAATCCTTTGGTAATAGAGCAGTTCTGTTTGACTCCTTCTGTACCCCGGTTCTAACCGATGAATGGGGTGGAGATGATGAAGAAAGAACTCCTGGACCAAGGCCAAGATGGATCCCAAAGCCTGAGCAAATCCGCATTCTCAAAGCCATCTATAACTCAGGGATGACGAATCCACGTAGAGATGAGATTAAGAAGATACGTGGACAATTAGAAGAATTTGGACCGATTGGTGATTCCAGCGTCTTTTATTGGTTTCAAAATCGCAAAAGCAAAACCAACAAAGTACCCTATAACAAGAAACAGGAAACACAACAAAACGCAGCTCCAGATAGCTCTCTCCCACAAATCACCACACCACCACTCAACTCATCTTCATCATCTTCCTCTAACAATATTGGAATCTCCAATATTAATGATGGGACGGTGATGGTGCCTAATTCACCTGCAATCTCTCTGAGCCAAAACCAAGGTGGTACTTATCCTCACACCCTCACTGGAACCGTGCTTAATGACATGATAAGGCCAGAGGGGTTTAATTACTTCTCTGATTTTCCAAATATGAGTCAATCCCTACCTCAAGAAAATGTTGATCTGCTTAATTATGATAACATCATGACCTATGGAAATGGAAACTGCTCAATCGATGACCTTTTTTATCAAGAGAATATTCAAGAGGAGTCGATTAATATGATGCATATGCACCAACAAGACCCACAACTTAATTTTGGTGTCACGACAGCTTCAAGTTTTGGTGAGGACGATGGTACAGCAAAATGTAGGGTGATTACTATCAACGGTACATTCAAAGTTAATGCAGGGCCTTTTAACGTTCGTAAATTCTTTGGCGATGGAGCAGTTCTACTTGACTCCTCCGGTGTCCCGGTTCTAACCGATGAGTGGGGTGTCACCCTCAACTCACTCCACCATGGGGCTGATTATTTCCTG

Protein sequence

>Msa1434450

MNNENENGICSTNDLFDQVNVQEEAMNMMHMHQQDPQFNFGVTTTSSNDDHSTDLAPLPPAIDMSAPADIPFLFTDDQLQGFGEEDGLRKCRIFTANEVIEVNAGPFNVRESFGNRAVLFDSFCTPVLTDEWGGDDEERTPGPRPRWIPKPEQIRILKAIYNSGMTNPRRDEIKKIRGQLEEFGPIGDSSVFYWFQNRKSKTNKVPYNKKQETQQNAAPDSSLPQITTPPLNSSSSSSSNNIGISNINDGTVMVPNSPAISLSQNQGGTYPHTLTGTVLNDMIRPEGFNYFSDFPNMSQSLPQENVDLLNYDNIMTYGNGNCSIDDLFYQENIQEESINMMHMHQQDPQLNFGVTTASSFGEDDGTAKCRVITINGTFKVNAGPFNVRKFFGDGAVLLDSSGVPVLTDEWGVTLNSLHHGADYFL