Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1434460 | KEH30946.1 | 70.667 | 75 | 19 | 1 | 3 | 74 | 23 | 97 | 4.72e-23 | 105 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1434460 | sp|A3B6V0|WOX12_ORYSJ | 64.151 | 53 | 19 | 0 | 3 | 55 | 66 | 118 | 2.16e-17 | 82.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1434460 | A0A072UNJ4 | 70.667 | 75 | 19 | 1 | 3 | 74 | 23 | 97 | 2.25e-23 | 105 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1434460 | TF | HB-WOX |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1434460 | MtrunA17_Chr7g0223471 | 60.606 | 66 | 23 | 1 | 4 | 66 | 42 | 107 | 4.60e-19 | 83.2 |
| Msa1434460 | MtrunA17_Chr2g0283141 | 56.923 | 65 | 28 | 0 | 3 | 67 | 49 | 113 | 2.29e-18 | 81.3 |
| Msa1434460 | MtrunA17_Chr6g0460691 | 65.116 | 43 | 15 | 0 | 7 | 49 | 30 | 72 | 3.96e-13 | 65.9 |
| Msa1434460 | MtrunA17_Chr7g0254251 | 65.116 | 43 | 15 | 0 | 7 | 49 | 26 | 68 | 2.66e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1434460 | AT2G33880.2 | 55.385 | 65 | 29 | 0 | 3 | 67 | 49 | 113 | 3.94e-18 | 80.9 |
| Msa1434460 | AT2G33880.1 | 55.385 | 65 | 29 | 0 | 3 | 67 | 49 | 113 | 4.64e-18 | 80.5 |
| Msa1434460 | AT5G45980.1 | 48.193 | 83 | 37 | 2 | 4 | 80 | 50 | 132 | 5.56e-16 | 74.3 |
| Msa1434460 | AT5G17810.3 | 62.791 | 43 | 16 | 0 | 7 | 49 | 19 | 61 | 2.78e-12 | 63.5 |
| Msa1434460 | AT5G17810.1 | 62.791 | 43 | 16 | 0 | 7 | 49 | 19 | 61 | 2.95e-12 | 63.5 |
| Msa1434460 | AT5G17810.2 | 62.791 | 43 | 16 | 0 | 7 | 49 | 19 | 61 | 2.95e-12 | 63.5 |
| Msa1434460 | AT3G03660.1 | 60.465 | 43 | 17 | 0 | 7 | 49 | 31 | 73 | 1.71e-11 | 61.2 |
| Msa1434460 | AT3G03660.2 | 60.465 | 43 | 17 | 0 | 7 | 49 | 31 | 73 | 1.81e-11 | 61.6 |
| Msa1434460 | AT3G03660.4 | 60.465 | 43 | 17 | 0 | 7 | 49 | 31 | 73 | 1.83e-11 | 61.6 |
| Msa1434460 | AT3G03660.3 | 60.465 | 43 | 17 | 0 | 7 | 49 | 31 | 73 | 1.85e-11 | 61.6 |
Find 52 sgRNAs with CRISPR-Local
Find 367 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTGAACAATTAGAAGAATT+TGG | 0.130042 | tig0027531:-24285 | Msa1434460:CDS |
| TTAGAAGAATTTGGGAAAAT+TGG | 0.179693 | tig0027531:-24276 | Msa1434460:intron |
| CCATTGAGAAAGAGGAAAAT+AGG | 0.245649 | tig0027531:+23911 | None:intergenic |
| AATAAGTATCATCTTGCTTT+TGG | 0.259990 | tig0027531:+23974 | None:intergenic |
| ATGCGGATTTGCTCAGGCTT+TGG | 0.283372 | tig0027531:+24369 | None:intergenic |
| CACTCTCCCATCATTAATAT+TGG | 0.292661 | tig0027531:+24029 | None:intergenic |
| GCCTGAGCAAATCCGCATTC+TGG | 0.308743 | tig0027531:-24364 | Msa1434460:CDS |
| TGCGGATTTGCTCAGGCTTT+GGG | 0.308960 | tig0027531:+24370 | None:intergenic |
| TCAGGCTTTGGGTTCCATCT+TGG | 0.322968 | tig0027531:+24381 | None:intergenic |
| TTTCACTGGGAGAGGCTCTT+TGG | 0.326910 | tig0027531:+24079 | None:intergenic |
| TTTGGGTTCCATCTTGGCCT+TGG | 0.327019 | tig0027531:+24387 | None:intergenic |
| ATCACAATATCTAACAATAT+TGG | 0.329123 | tig0027531:-24057 | Msa1434460:CDS |
| GGAGAGATTGTGGATGAATT+AGG | 0.338412 | tig0027531:+24000 | None:intergenic |
| GGTGGTGGTGGTGGGATTTG+TGG | 0.341213 | tig0027531:+24132 | None:intergenic |
| GTGGTGGTGGTGGGATTTGT+GGG | 0.343259 | tig0027531:+24133 | None:intergenic |
| ATTTGTGGGAGAGAGTTATT+AGG | 0.358733 | tig0027531:+24147 | None:intergenic |
| GTGAACAATTAGAAGAATTT+GGG | 0.359582 | tig0027531:-24284 | Msa1434460:CDS |
| TTCCATCTTGGCCTTGGTCC+AGG | 0.361114 | tig0027531:+24393 | None:intergenic |
| GATGGATTAGGTGGTGGTGG+TGG | 0.376558 | tig0027531:+24123 | None:intergenic |
| AGAGGCTCTTTGGTGATTAG+AGG | 0.377467 | tig0027531:+24089 | None:intergenic |
| CTGGAAGCAATCTACAACTC+AGG | 0.386585 | tig0027531:-24345 | Msa1434460:CDS |
| GAAGATGATGAAGATGGATT+AGG | 0.391757 | tig0027531:+24111 | None:intergenic |
| GTTGTAGATCGGTTTCAGTT+GGG | 0.400667 | tig0027531:+23944 | None:intergenic |
| GATAATGAAGAAAGAAATCC+TGG | 0.405944 | tig0027531:-24411 | Msa1434460:intron |
| CATTGAGAAAGAGGAAAATA+GGG | 0.407191 | tig0027531:+23912 | None:intergenic |
| TTAGGAGCTGGATCTGCAAT+TGG | 0.417412 | tig0027531:+24165 | None:intergenic |
| TCCAGAATGCGGATTTGCTC+AGG | 0.421812 | tig0027531:+24363 | None:intergenic |
| GTTAGATATTGTGATTTCAC+TGG | 0.434652 | tig0027531:+24065 | None:intergenic |
| ATGATTCTCCATTGAGAAAG+AGG | 0.435482 | tig0027531:+23903 | None:intergenic |
| GGAATCTCCAATATTAATGA+TGG | 0.437319 | tig0027531:-24036 | Msa1434460:CDS |
| ATCTTCTTGATTTCATCTAC+AGG | 0.443482 | tig0027531:+24309 | None:intergenic |
| AGTTGTAGATCGGTTTCAGT+TGG | 0.468112 | tig0027531:+23943 | None:intergenic |
| ATGGATTAGGTGGTGGTGGT+GGG | 0.472541 | tig0027531:+24124 | None:intergenic |
| ATGGAGAATCATGTTAATGA+AGG | 0.479722 | tig0027531:-23892 | Msa1434460:CDS |
| TTGTAGATCGGTTTCAGTTG+GGG | 0.501118 | tig0027531:+23945 | None:intergenic |
| GAAGATGGATTAGGTGGTGG+TGG | 0.501572 | tig0027531:+24120 | None:intergenic |
| TATTGTGATTTCACTGGGAG+AGG | 0.511945 | tig0027531:+24071 | None:intergenic |
| GGGAGAGAGTTATTAGGAGC+TGG | 0.513692 | tig0027531:+24153 | None:intergenic |
| ATCCTGGACCAAGGCCAAGA+TGG | 0.528279 | tig0027531:-24395 | Msa1434460:CDS |
| TTCTTGATTTCATCTACAGG+TGG | 0.556034 | tig0027531:+24312 | None:intergenic |
| TGGAGAATCATGTTAATGAA+GGG | 0.558945 | tig0027531:-23891 | Msa1434460:CDS |
| TTAGAGGAAGATGATGAAGA+TGG | 0.564984 | tig0027531:+24105 | None:intergenic |
| GAATCTCCAATATTAATGAT+GGG | 0.575519 | tig0027531:-24035 | Msa1434460:CDS |
| TTAGATATTGTGATTTCACT+GGG | 0.581998 | tig0027531:+24066 | None:intergenic |
| TGGAAGCAATCTACAACTCA+GGG | 0.590445 | tig0027531:-24344 | Msa1434460:CDS |
| TTTCAAAACCGCAAGTCCAA+AGG | 0.599228 | tig0027531:-24231 | Msa1434460:CDS |
| TGTAGATTGCTTCCAGAATG+CGG | 0.605667 | tig0027531:+24352 | None:intergenic |
| GGAGAATCATGTTAATGAAG+GGG | 0.615858 | tig0027531:-23890 | Msa1434460:CDS |
| GATGATGAAGATGGATTAGG+TGG | 0.643509 | tig0027531:+24114 | None:intergenic |
| GATGAAGATGGATTAGGTGG+TGG | 0.649565 | tig0027531:+24117 | None:intergenic |
| AAGAAAGAAATCCTGGACCA+AGG | 0.658709 | tig0027531:-24404 | Msa1434460:intron |
| TATTAATGATGGGAGAGTGT+TGG | 0.676983 | tig0027531:-24025 | Msa1434460:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTTGATAAAATAATTTAG+TGG | - | tig0027531:25041-25060 | Msa1434460:intron | 10.0% |
| !! | ATATATATATATATATTCGA+GGG | + | tig0027531:25079-25098 | None:intergenic | 10.0% |
| !! | TATATATATATATATATTCG+AGG | + | tig0027531:25080-25099 | None:intergenic | 10.0% |
| !! | TGAAATTTATAAAATACTTA+CGG | + | tig0027531:25536-25555 | None:intergenic | 10.0% |
| !!! | TTATTTTATTTTTTATGAAC+TGG | - | tig0027531:25817-25836 | Msa1434460:intron | 10.0% |
| !!! | TTTTAAAAAAATTTCTAGAT+GGG | + | tig0027531:26935-26954 | None:intergenic | 10.0% |
| !!! | TTTTTAAAAAAATTTCTAGA+TGG | + | tig0027531:26936-26955 | None:intergenic | 10.0% |
| !! | AAAAAAAATCATTCAAAAAT+TGG | - | tig0027531:27318-27337 | Msa1434460:intron | 10.0% |
| !! | TAATAATAATAAAAAGTAGA+AGG | + | tig0027531:28407-28426 | None:intergenic | 10.0% |
| !!! | TTTCTAAAACTATTTTTTAT+GGG | + | tig0027531:28751-28770 | None:intergenic | 10.0% |
| !!! | ATTTCTAAAACTATTTTTTA+TGG | + | tig0027531:28752-28771 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTAAAGATGTG+TGG | + | tig0027531:24123-24142 | None:intergenic | 15.0% |
| !! | TTCTAATTAAGTTATTAGAT+CGG | - | tig0027531:24816-24835 | Msa1434460:intron | 15.0% |
| !!! | AAAAATCATCTTTTTTTAGA+CGG | + | tig0027531:24916-24935 | None:intergenic | 15.0% |
| !!! | TAAGTATATGAAACTTTTTA+AGG | - | tig0027531:25207-25226 | Msa1434460:intron | 15.0% |
| !!! | TTTTTTTAAAGTGAATAAGT+AGG | - | tig0027531:25593-25612 | Msa1434460:intron | 15.0% |
| !!! | GATAAACAATTTTTTAAGTT+TGG | - | tig0027531:26228-26247 | Msa1434460:intron | 15.0% |
| !!! | TATTTAATTTTTTTTCCAAG+TGG | + | tig0027531:26819-26838 | None:intergenic | 15.0% |
| !!! | TTGAAAAATTGTTTAAAATC+TGG | + | tig0027531:26980-26999 | None:intergenic | 15.0% |
| !!! | GATTTTAAACAATTTTTCAA+CGG | - | tig0027531:26980-26999 | Msa1434460:intron | 15.0% |
| !! | GGTCAAATTAAAAATAAAAA+TGG | + | tig0027531:27844-27863 | None:intergenic | 15.0% |
| !!! | ATTTTTTTAAAGCTAAGATT+AGG | + | tig0027531:28605-28624 | None:intergenic | 15.0% |
| !!! | TCTGTTATCACTTTTTTTTA+AGG | + | tig0027531:24096-24115 | None:intergenic | 20.0% |
| !!! | AAACTTTGTTGACTTATTTA+TGG | + | tig0027531:25324-25343 | None:intergenic | 20.0% |
| !! | AAAGAAATTCTTACCATAAA+AGG | + | tig0027531:25347-25366 | None:intergenic | 20.0% |
| !! | ACGATACATATTAAAAAGTT+GGG | + | tig0027531:25415-25434 | None:intergenic | 20.0% |
| !! | TACGATACATATTAAAAAGT+TGG | + | tig0027531:25416-25435 | None:intergenic | 20.0% |
| !! | TGACTCAAGTTATATATTTA+TGG | + | tig0027531:25445-25464 | None:intergenic | 20.0% |
| !! | ATATATAACTTGAGTCAAAA+AGG | - | tig0027531:25448-25467 | Msa1434460:intron | 20.0% |
| !! | AATGAGATATGTATATGAAA+TGG | - | tig0027531:25476-25495 | Msa1434460:intron | 20.0% |
| !! | ATATGTATATGAAATGGTAA+CGG | - | tig0027531:25482-25501 | Msa1434460:intron | 20.0% |
| !! | ATTCTAATCACTAAACTATT+AGG | + | tig0027531:25569-25588 | None:intergenic | 20.0% |
| !! | TTAGCATAATGTTTATAAAG+AGG | - | tig0027531:25770-25789 | Msa1434460:intron | 20.0% |
| !! | TAGCATAATGTTTATAAAGA+GGG | - | tig0027531:25771-25790 | Msa1434460:intron | 20.0% |
| !! | AAATAACGTTAAAACTCTTA+AGG | + | tig0027531:25913-25932 | None:intergenic | 20.0% |
| !! | AATTAGTTCAAATACTTGTA+TGG | - | tig0027531:26063-26082 | Msa1434460:intron | 20.0% |
| !! | ATTAGTTCAAATACTTGTAT+GGG | - | tig0027531:26064-26083 | Msa1434460:intron | 20.0% |
| !!! | TTATCACCCAAATAATTTTT+GGG | + | tig0027531:26213-26232 | None:intergenic | 20.0% |
| !!! | TTTATCACCCAAATAATTTT+TGG | + | tig0027531:26214-26233 | None:intergenic | 20.0% |
| !! | ACTAGCAATTTATTTATACT+TGG | - | tig0027531:26760-26779 | Msa1434460:intron | 20.0% |
| !! | AATCTTGCAAAATAAACTTA+TGG | + | tig0027531:26849-26868 | None:intergenic | 20.0% |
| !!! | TAGGAGAATTTTTAATTGAT+TGG | + | tig0027531:27127-27146 | None:intergenic | 20.0% |
| !! | TTGTTTGTATTATTGTACAA+CGG | + | tig0027531:27155-27174 | None:intergenic | 20.0% |
| !! | GAACAAACTTAAGATATTAA+TGG | + | tig0027531:27272-27291 | None:intergenic | 20.0% |
| !! | GATTCAAATTGTATTATTCA+GGG | + | tig0027531:27358-27377 | None:intergenic | 20.0% |
| !! | AATAGGTATGATATTCATAA+CGG | - | tig0027531:27386-27405 | Msa1434460:intron | 20.0% |
| !!! | TCCAAAAAAACTCAAATTTT+TGG | - | tig0027531:27437-27456 | Msa1434460:intron | 20.0% |
| !!! | ACCAAAAATTTGAGTTTTTT+TGG | + | tig0027531:27441-27460 | None:intergenic | 20.0% |
| !! | TAATTGAAAGAGTAGAAAAA+GGG | + | tig0027531:27567-27586 | None:intergenic | 20.0% |
| !!! | CTTTCTTCATATTATTTTGA+CGG | + | tig0027531:27915-27934 | None:intergenic | 20.0% |
| !! | TATAGTAGTAGTAAATAAGA+GGG | + | tig0027531:27964-27983 | None:intergenic | 20.0% |
| !! | ATATAGTAGTAGTAAATAAG+AGG | + | tig0027531:27965-27984 | None:intergenic | 20.0% |
| !!! | ATCTCTGTATTTTGATATTT+AGG | - | tig0027531:28192-28211 | Msa1434460:intron | 20.0% |
| !!! | TTTAGTTTTTTTTCCATGTT+AGG | - | tig0027531:28526-28545 | Msa1434460:intron | 20.0% |
| !!! | TTAGTTTTTTTTCCATGTTA+GGG | - | tig0027531:28527-28546 | Msa1434460:intron | 20.0% |
| !!! | AAGATCAAATAGTAGATTTT+AGG | + | tig0027531:28635-28654 | None:intergenic | 20.0% |
| !! | GCTTATAACAAATATTGTTT+AGG | - | tig0027531:28852-28871 | Msa1434460:intron | 20.0% |
| !! | TATAACAAATATTGTTTAGG+TGG | - | tig0027531:28855-28874 | Msa1434460:intron | 20.0% |
| !! | ATCACAATATCTAACAATAT+TGG | - | tig0027531:29233-29252 | Msa1434460:intron | 20.0% |
| ! | TCCAAAATTCCATCTAATAT+TGG | - | tig0027531:24578-24597 | Msa1434460:intron | 25.0% |
| ! | CCAAAATTCCATCTAATATT+GGG | - | tig0027531:24579-24598 | Msa1434460:intron | 25.0% |
| ! | TTAACCAACTTGAATTAACT+TGG | + | tig0027531:24779-24798 | None:intergenic | 25.0% |
| ! | TTGCGTTTGTAAGATTTAAA+TGG | - | tig0027531:24875-24894 | Msa1434460:intron | 25.0% |
| ! | ACTGGTTAAGAATACAAAAA+AGG | - | tig0027531:25255-25274 | Msa1434460:intron | 25.0% |
| ! | CTGGTTAAGAATACAAAAAA+GGG | - | tig0027531:25256-25275 | Msa1434460:intron | 25.0% |
| !!! | CTTTTTTTTGTATGCTTAAC+CGG | - | tig0027531:25363-25382 | Msa1434460:intron | 25.0% |
| !!! | GTAACGGATGAAAATAAATA+AGG | - | tig0027531:25498-25517 | Msa1434460:intron | 25.0% |
| ! | ATTATTATATGCAGAGAATG+AGG | + | tig0027531:25635-25654 | None:intergenic | 25.0% |
| ! | TTGGATTACTATGTTATTGT+AGG | + | tig0027531:26118-26137 | None:intergenic | 25.0% |
| ! | AATGTTCCCCAAAAATTATT+TGG | - | tig0027531:26203-26222 | Msa1434460:intron | 25.0% |
| ! | ATGTTCCCCAAAAATTATTT+GGG | - | tig0027531:26204-26223 | Msa1434460:intron | 25.0% |
| !! | TATCACCCAAATAATTTTTG+GGG | + | tig0027531:26212-26231 | None:intergenic | 25.0% |
| !!! | CTGTAACATGATTTTAATCA+TGG | + | tig0027531:26702-26721 | None:intergenic | 25.0% |
| !! | TTGTTTAAAATCTGGCAAAA+TGG | + | tig0027531:26972-26991 | None:intergenic | 25.0% |
| !! | ATTTTTGTCATGTGTATACT+TGG | - | tig0027531:27039-27058 | Msa1434460:intron | 25.0% |
| ! | TAATTGATTGGACAATACAA+GGG | + | tig0027531:27115-27134 | None:intergenic | 25.0% |
| ! | TTAATTGATTGGACAATACA+AGG | + | tig0027531:27116-27135 | None:intergenic | 25.0% |
| ! | GGATTCAAATTGTATTATTC+AGG | + | tig0027531:27359-27378 | None:intergenic | 25.0% |
| ! | ATTTGAATCCAACAAGAAAT+AGG | - | tig0027531:27369-27388 | Msa1434460:intron | 25.0% |
| !! | ATATCATACCTATTTCTTGT+TGG | + | tig0027531:27380-27399 | None:intergenic | 25.0% |
| !!! | AGTTGTAAAGTTTTTTCTTC+AGG | + | tig0027531:27472-27491 | None:intergenic | 25.0% |
| !!! | GTTTTGTTTGATTGGAAAAA+TGG | + | tig0027531:27507-27526 | None:intergenic | 25.0% |
| ! | GTAATTGAAAGAGTAGAAAA+AGG | + | tig0027531:27568-27587 | None:intergenic | 25.0% |
| ! | AAAGAAAGAAGAAATTGTGA+TGG | + | tig0027531:27599-27618 | None:intergenic | 25.0% |
| !!! | ATGCAAGCGTTTTATTAAAT+AGG | - | tig0027531:27877-27896 | Msa1434460:intron | 25.0% |
| !!! | TATTATTTTGACGGAAAATG+TGG | + | tig0027531:27906-27925 | None:intergenic | 25.0% |
| !!! | AGTACTAGGTTTTATAAAAC+TGG | + | tig0027531:28158-28177 | None:intergenic | 25.0% |
| ! | GATTATTAGAGATAAGTACT+AGG | + | tig0027531:28172-28191 | None:intergenic | 25.0% |
| !!! | TCGATATAATTTGTTTCGAT+TGG | + | tig0027531:28506-28525 | None:intergenic | 25.0% |
| !!! | TAGTTTTTTTTCCATGTTAG+GGG | - | tig0027531:28528-28547 | Msa1434460:intron | 25.0% |
| !! | TACTATTTGATCTTTTCCAA+TGG | - | tig0027531:28641-28660 | Msa1434460:intron | 25.0% |
| ! | GTGAACAATTAGAAGAATTT+GGG | - | tig0027531:29006-29025 | Msa1434460:intron | 25.0% |
| ! | TTAGAAGAATTTGGGAAAAT+TGG | - | tig0027531:29014-29033 | Msa1434460:intron | 25.0% |
| ! | TTAGATATTGTGATTTCACT+GGG | + | tig0027531:29227-29246 | None:intergenic | 25.0% |
| ! | GAATCTCCAATATTAATGAT+GGG | - | tig0027531:29255-29274 | Msa1434460:intron | 25.0% |
| !! | AATAAGTATCATCTTGCTTT+TGG | + | tig0027531:29319-29338 | None:intergenic | 25.0% |
| TATTTGCGATAGAAATGTAG+AGG | + | tig0027531:24306-24325 | None:intergenic | 30.0% | |
| AGGAAAATAATGTTGCTCAA+CGG | + | tig0027531:24415-24434 | None:intergenic | 30.0% | |
| ! | TAGATGGAATTTTGGATTTC+TGG | + | tig0027531:24574-24593 | None:intergenic | 30.0% |
| ! | CCCAATATTAGATGGAATTT+TGG | + | tig0027531:24582-24601 | None:intergenic | 30.0% |
| ATCACAAACCCAATATTAGA+TGG | + | tig0027531:24590-24609 | None:intergenic | 30.0% | |
| AAAAAAATAGATGTGCCACA+TGG | - | tig0027531:24683-24702 | Msa1434460:intron | 30.0% | |
| !! | GAATTAACTTGGTGATGTTA+GGG | + | tig0027531:24768-24787 | None:intergenic | 30.0% |
| !! | TGAATTAACTTGGTGATGTT+AGG | + | tig0027531:24769-24788 | None:intergenic | 30.0% |
| ATCACCAAGTTAATTCAAGT+TGG | - | tig0027531:24772-24791 | Msa1434460:intron | 30.0% | |
| ATATATATATTCGAGGGTCA+GGG | + | tig0027531:25073-25092 | None:intergenic | 30.0% | |
| TATATATATATTCGAGGGTC+AGG | + | tig0027531:25074-25093 | None:intergenic | 30.0% | |
| !! | CTTTTTAAGGAAATGCTAAC+CGG | - | tig0027531:25220-25239 | Msa1434460:intron | 30.0% |
| ! | GTCAACAAAGTTTCCTTTTA+TGG | - | tig0027531:25331-25350 | Msa1434460:intron | 30.0% |
| AAATACTTACGGTACATTGA+GGG | + | tig0027531:25525-25544 | None:intergenic | 30.0% | |
| AAAATACTTACGGTACATTG+AGG | + | tig0027531:25526-25545 | None:intergenic | 30.0% | |
| AAGTGAATAAGTAGGATGTA+CGG | - | tig0027531:25601-25620 | Msa1434460:intron | 30.0% | |
| !! | CTCTGAAATTGTTATATGCA+GGG | + | tig0027531:25664-25683 | None:intergenic | 30.0% |
| !! | ACTCTGAAATTGTTATATGC+AGG | + | tig0027531:25665-25684 | None:intergenic | 30.0% |
| TTGAGTCTCACAAAACTTAA+GGG | + | tig0027531:25874-25893 | None:intergenic | 30.0% | |
| TTTGAGTCTCACAAAACTTA+AGG | + | tig0027531:25875-25894 | None:intergenic | 30.0% | |
| !! | TAAGTTTTGTGAGACTCAAA+TGG | - | tig0027531:25875-25894 | Msa1434460:intron | 30.0% |
| !! | AAGTTTTGTGAGACTCAAAT+GGG | - | tig0027531:25876-25895 | Msa1434460:intron | 30.0% |
| !! | TTAACGTTATTTCTCGTCTA+AGG | - | tig0027531:25921-25940 | Msa1434460:intron | 30.0% |
| ! | CATTTTATCTAAACGCTCTT+AGG | - | tig0027531:25990-26009 | Msa1434460:intron | 30.0% |
| ACAATGATAAATTGAGCACT+CGG | - | tig0027531:26263-26282 | Msa1434460:intron | 30.0% | |
| CACGATTATTTCACGAATAA+TGG | - | tig0027531:26423-26442 | Msa1434460:intron | 30.0% | |
| TCAACTTATCCAAGATCTAA+TGG | + | tig0027531:26453-26472 | None:intergenic | 30.0% | |
| ! | TTGGATAAGTTGACATACAT+GGG | - | tig0027531:26460-26479 | Msa1434460:intron | 30.0% |
| !! | CACAGTTGGCAAATTTTAAT+TGG | + | tig0027531:26634-26653 | None:intergenic | 30.0% |
| !!! | AGAATTTTTCAAGACACAGT+TGG | + | tig0027531:26648-26667 | None:intergenic | 30.0% |
| CAATTTATTTATACTTGGCG+AGG | - | tig0027531:26765-26784 | Msa1434460:intron | 30.0% | |
| !!! | TCAACGGTTTTAATTTTCGA+CGG | - | tig0027531:26996-27015 | Msa1434460:intron | 30.0% |
| TTATTGTACAACGGTTAACT+AGG | + | tig0027531:27146-27165 | None:intergenic | 30.0% | |
| !!! | TGTGAGATGTTTTGTTTGAT+TGG | + | tig0027531:27515-27534 | None:intergenic | 30.0% |
| AAACATCTCACATTTCTTCT+TGG | - | tig0027531:27523-27542 | Msa1434460:intron | 30.0% | |
| ! | CTACTTTCCTTTTACTTCAT+TGG | - | tig0027531:27795-27814 | Msa1434460:intron | 30.0% |
| TAAAACGCTTGCATATAGAA+GGG | + | tig0027531:27871-27890 | None:intergenic | 30.0% | |
| ATAAAACGCTTGCATATAGA+AGG | + | tig0027531:27872-27891 | None:intergenic | 30.0% | |
| !! | CAAGCGTTTTATTAAATAGG+AGG | - | tig0027531:27880-27899 | Msa1434460:intron | 30.0% |
| AAAAAGTAGAAGGAGTTGTT+TGG | + | tig0027531:28397-28416 | None:intergenic | 30.0% | |
| TACTAGAGATCATGTTTGTT+TGG | + | tig0027531:28572-28591 | None:intergenic | 30.0% | |
| TTAGGATTTCAATGCAAGTA+AGG | - | tig0027531:28693-28712 | Msa1434460:intron | 30.0% | |
| TTGCTTGAATGTGTGAATTT+AGG | + | tig0027531:28722-28741 | None:intergenic | 30.0% | |
| GTAAACTTTGCATGTTTGAT+CGG | - | tig0027531:28830-28849 | Msa1434460:intron | 30.0% | |
| ATCTTCTTGATTTCATCTAC+AGG | + | tig0027531:28984-29003 | None:intergenic | 30.0% | |
| CGTGAACAATTAGAAGAATT+TGG | - | tig0027531:29005-29024 | Msa1434460:intron | 30.0% | |
| !!! | TGCTTTTTTGTTTTTGCCTT+TGG | + | tig0027531:29078-29097 | None:intergenic | 30.0% |
| !!! | GTTGTCTTTTTGATTTCTTG+GGG | + | tig0027531:29106-29125 | None:intergenic | 30.0% |
| !!! | GGTTGTCTTTTTGATTTCTT+GGG | + | tig0027531:29107-29126 | None:intergenic | 30.0% |
| !!! | TGGTTGTCTTTTTGATTTCT+TGG | + | tig0027531:29108-29127 | None:intergenic | 30.0% |
| GTTAGATATTGTGATTTCAC+TGG | + | tig0027531:29228-29247 | None:intergenic | 30.0% | |
| GGAATCTCCAATATTAATGA+TGG | - | tig0027531:29254-29273 | Msa1434460:intron | 30.0% | |
| ! | AAAGAGGAAAATAGGGTTTT+AGG | + | tig0027531:29374-29393 | None:intergenic | 30.0% |
| CATTGAGAAAGAGGAAAATA+GGG | + | tig0027531:29381-29400 | None:intergenic | 30.0% | |
| ATGGAGAATCATGTTAATGA+AGG | - | tig0027531:29398-29417 | Msa1434460:intron | 30.0% | |
| TGGAGAATCATGTTAATGAA+GGG | - | tig0027531:29399-29418 | Msa1434460:intron | 30.0% | |
| TCTCTCTATCTCTATGTTAC+AGG | + | tig0027531:24648-24667 | None:intergenic | 35.0% | |
| ATCAGAGTTGTATATTGCAC+TGG | + | tig0027531:24237-24256 | None:intergenic | 35.0% | |
| TAGAAATGTAGAGGATGATG+TGG | + | tig0027531:24297-24316 | None:intergenic | 35.0% | |
| ! | AACTAACAAAGCGTCTTCAT+CGG | - | tig0027531:24384-24403 | Msa1434460:CDS | 35.0% |
| TCTCTCTATCTCTATGTTAC+AGG | - | tig0027531:24648-24667 | Msa1434460:intron | 35.0% | |
| ATTCCACTTCCATGACATTA+AGG | + | tig0027531:24745-24764 | None:intergenic | 35.0% | |
| AATCTTACAAACGCAAGTGT+AGG | + | tig0027531:24871-24890 | None:intergenic | 35.0% | |
| AGTGAATAAGTAGGATGTAC+GGG | - | tig0027531:25602-25621 | Msa1434460:intron | 35.0% | |
| !! | TTCTGGTTTATCTAAGTTCG+TGG | + | tig0027531:25959-25978 | None:intergenic | 35.0% |
| AAAATGATACGAGTCTCTTC+TGG | + | tig0027531:25976-25995 | None:intergenic | 35.0% | |
| ! | AGGTACAAAATTTTCGTCGT+TGG | + | tig0027531:26098-26117 | None:intergenic | 35.0% |
| AATTGAGCACTCGGTTAAAT+TGG | - | tig0027531:26272-26291 | Msa1434460:intron | 35.0% | |
| AATGGACAACCATTAGATCT+TGG | - | tig0027531:26441-26460 | Msa1434460:intron | 35.0% | |
| ! | CTTGGATAAGTTGACATACA+TGG | - | tig0027531:26459-26478 | Msa1434460:intron | 35.0% |
| ! | ACTATCGCGAGATAAGTTTT+CGG | - | tig0027531:26733-26752 | Msa1434460:intron | 35.0% |
| TGAAACCCATGCTAATTAGA+AGG | + | tig0027531:27087-27106 | None:intergenic | 35.0% | |
| TGAAAGAGTAGAAAAAGGGA+GGG | + | tig0027531:27563-27582 | None:intergenic | 35.0% | |
| TTGAAAGAGTAGAAAAAGGG+AGG | + | tig0027531:27564-27583 | None:intergenic | 35.0% | |
| TTAAGCAGTGTAAGTAAAGC+TGG | - | tig0027531:27721-27740 | Msa1434460:intron | 35.0% | |
| CACATCACCAATGAAGTAAA+AGG | + | tig0027531:27805-27824 | None:intergenic | 35.0% | |
| ! | CTTTTGATCAATGGAAGAGA+AGG | + | tig0027531:27997-28016 | None:intergenic | 35.0% |
| !!! | GTTTTTCAGTTTGCTAGCAA+TGG | + | tig0027531:28022-28041 | None:intergenic | 35.0% |
| GGGATAGATAGAGAAAGTAA+GGG | + | tig0027531:28235-28254 | None:intergenic | 35.0% | |
| TGGGATAGATAGAGAAAGTA+AGG | + | tig0027531:28236-28255 | None:intergenic | 35.0% | |
| ! | CTCGTAAGAAGAAAGTACAT+TGG | - | tig0027531:28282-28301 | Msa1434460:intron | 35.0% |
| ! | GGTGACTTTATAAACTTGCT+TGG | + | tig0027531:28308-28327 | None:intergenic | 35.0% |
| TGTTTATATGTCCCCTAACA+TGG | + | tig0027531:28542-28561 | None:intergenic | 35.0% | |
| TTTACACCGTCAAGCAAATA+TGG | + | tig0027531:28672-28691 | None:intergenic | 35.0% | |
| TTGCTTGACGGTGTAAATTT+AGG | - | tig0027531:28675-28694 | Msa1434460:intron | 35.0% | |
| TTCTTGATTTCATCTACAGG+TGG | + | tig0027531:28981-29000 | None:intergenic | 35.0% | |
| !!! | CTTTTTGATTTCTTGGGGTA+GGG | + | tig0027531:29101-29120 | None:intergenic | 35.0% |
| !!! | TCTTTTTGATTTCTTGGGGT+AGG | + | tig0027531:29102-29121 | None:intergenic | 35.0% |
| ATTTGTGGGAGAGAGTTATT+AGG | + | tig0027531:29146-29165 | None:intergenic | 35.0% | |
| ! | GAAGATGATGAAGATGGATT+AGG | + | tig0027531:29182-29201 | None:intergenic | 35.0% |
| TTAGAGGAAGATGATGAAGA+TGG | + | tig0027531:29188-29207 | None:intergenic | 35.0% | |
| CACTCTCCCATCATTAATAT+TGG | + | tig0027531:29264-29283 | None:intergenic | 35.0% | |
| ! | TATTAATGATGGGAGAGTGT+TGG | - | tig0027531:29265-29284 | Msa1434460:intron | 35.0% |
| !! | GTATCATCTTGCTTTTGGTT+CGG | + | tig0027531:29314-29333 | None:intergenic | 35.0% |
| !!! | GGTTTTAGGTAGTTGTAGAT+CGG | + | tig0027531:29360-29379 | None:intergenic | 35.0% |
| CCATTGAGAAAGAGGAAAAT+AGG | + | tig0027531:29382-29401 | None:intergenic | 35.0% | |
| ! | CCTATTTTCCTCTTTCTCAA+TGG | - | tig0027531:29379-29398 | Msa1434460:intron | 35.0% |
| ATGATTCTCCATTGAGAAAG+AGG | + | tig0027531:29390-29409 | None:intergenic | 35.0% | |
| GGAGAATCATGTTAATGAAG+GGG | - | tig0027531:29400-29419 | Msa1434460:intron | 35.0% | |
| AAGGTCTCAAGCTAACATCA+CGG | - | tig0027531:23933-23952 | Msa1434460:CDS | 40.0% | |
| ATTCCACTTCCGTGACATTA+AGG | - | tig0027531:23956-23975 | Msa1434460:CDS | 40.0% | |
| TTAAAATCAGATGTGCCACG+TGG | + | tig0027531:24018-24037 | None:intergenic | 40.0% | |
| !! | GAAGGGTATGTGATGGATAA+GGG | + | tig0027531:24186-24205 | None:intergenic | 40.0% |
| GTTGTATATTGCACTGGAGA+AGG | + | tig0027531:24231-24250 | None:intergenic | 40.0% | |
| GATTTCACGTCCAATTGAAC+CGG | - | tig0027531:24254-24273 | Msa1434460:intron | 40.0% | |
| TATTGGGTTTGTGATGTGTG+AGG | - | tig0027531:24595-24614 | Msa1434460:intron | 40.0% | |
| ATTGGGTTTGTGATGTGTGA+GGG | - | tig0027531:24596-24615 | Msa1434460:intron | 40.0% | |
| AAAAGTTGGGTCATGCTAAC+CGG | + | tig0027531:25402-25421 | None:intergenic | 40.0% | |
| GTGAATAAGTAGGATGTACG+GGG | - | tig0027531:25603-25622 | Msa1434460:intron | 40.0% | |
| ATCTCTACAATTGCGTGCAA+AGG | + | tig0027531:25847-25866 | None:intergenic | 40.0% | |
| AATCGTGATGTGTTTCATCG+AGG | + | tig0027531:26410-26429 | None:intergenic | 40.0% | |
| GGCAAATAGTGCATTGTGAT+TGG | + | tig0027531:26562-26581 | None:intergenic | 40.0% | |
| GCACTATTTGCCACAATTCA+AGG | - | tig0027531:26570-26589 | Msa1434460:intron | 40.0% | |
| CTATTTGCCACAATTCAAGG+AGG | - | tig0027531:26573-26592 | Msa1434460:intron | 40.0% | |
| ! | CTATCGCGAGATAAGTTTTC+GGG | - | tig0027531:26734-26753 | Msa1434460:intron | 40.0% |
| TGCAAATCCAAATATCCGCA+AGG | - | tig0027531:26898-26917 | Msa1434460:intron | 40.0% | |
| TACACAACCTTGCGGATATT+TGG | + | tig0027531:26908-26927 | None:intergenic | 40.0% | |
| TTGTCATGTGTATACTTGGC+TGG | - | tig0027531:27043-27062 | Msa1434460:intron | 40.0% | |
| ! | GTGTATACTTGGCTGGTTAA+CGG | - | tig0027531:27050-27069 | Msa1434460:intron | 40.0% |
| TACGGACCTTCTAATTAGCA+TGG | - | tig0027531:27078-27097 | Msa1434460:intron | 40.0% | |
| ACGGACCTTCTAATTAGCAT+GGG | - | tig0027531:27079-27098 | Msa1434460:intron | 40.0% | |
| TTGATTGGACAATACAAGGG+AGG | + | tig0027531:27112-27131 | None:intergenic | 40.0% | |
| AGTAGAAAAAGGGAGGGATA+AGG | + | tig0027531:27557-27576 | None:intergenic | 40.0% | |
| GTAAGTAAAGCTGGCAAACA+TGG | - | tig0027531:27730-27749 | Msa1434460:intron | 40.0% | |
| GCTTGCATATAGAAGGGAAA+AGG | + | tig0027531:27865-27884 | None:intergenic | 40.0% | |
| ! | GCAATGGTGCTTTTGATCAA+TGG | + | tig0027531:28006-28025 | None:intergenic | 40.0% |
| TGATCGATCGTTGATATGCT+GGG | + | tig0027531:28255-28274 | None:intergenic | 40.0% | |
| TATCAACGATCGATCAGCAA+TGG | - | tig0027531:28259-28278 | Msa1434460:intron | 40.0% | |
| !! | ATGCAGACGATTTTGATGGT+TGG | + | tig0027531:28345-28364 | None:intergenic | 40.0% |
| AACCATCAAAATCGTCTGCA+TGG | - | tig0027531:28344-28363 | Msa1434460:intron | 40.0% | |
| ! | TACCATGCAGACGATTTTGA+TGG | + | tig0027531:28349-28368 | None:intergenic | 40.0% |
| AGCAAATATGGTCAGACCAT+TGG | + | tig0027531:28660-28679 | None:intergenic | 40.0% | |
| GTCTGACCATATTTGCTTGA+CGG | - | tig0027531:28663-28682 | Msa1434460:intron | 40.0% | |
| TGTAGATTGCTTCCAGAATG+CGG | + | tig0027531:28941-28960 | None:intergenic | 40.0% | |
| TGGAAGCAATCTACAACTCA+GGG | - | tig0027531:28946-28965 | Msa1434460:intron | 40.0% | |
| ! | GTGATTCGAGTGTCTTTTAC+TGG | - | tig0027531:29036-29055 | Msa1434460:intron | 40.0% |
| TTTCAAAACCGCAAGTCCAA+AGG | - | tig0027531:29059-29078 | Msa1434460:intron | 40.0% | |
| !! | TGTTTTTGCCTTTGGACTTG+CGG | + | tig0027531:29070-29089 | None:intergenic | 40.0% |
| !! | GATGATGAAGATGGATTAGG+TGG | + | tig0027531:29179-29198 | None:intergenic | 40.0% |
| TATTGTGATTTCACTGGGAG+AGG | + | tig0027531:29222-29241 | None:intergenic | 40.0% | |
| GGAGAGATTGTGGATGAATT+AGG | + | tig0027531:29293-29312 | None:intergenic | 40.0% | |
| ! | TTGTAGATCGGTTTCAGTTG+GGG | + | tig0027531:29348-29367 | None:intergenic | 40.0% |
| ! | GTTGTAGATCGGTTTCAGTT+GGG | + | tig0027531:29349-29368 | None:intergenic | 40.0% |
| ! | AGTTGTAGATCGGTTTCAGT+TGG | + | tig0027531:29350-29369 | None:intergenic | 40.0% |
| !! | TTTTGGGTCACAGAGACTTC+GGG | + | tig0027531:23908-23927 | None:intergenic | 45.0% |
| !! | GTTTTGGGTCACAGAGACTT+CGG | + | tig0027531:23909-23928 | None:intergenic | 45.0% |
| !! | CTTGAGACCTTGGTGGTTTT+GGG | + | tig0027531:23924-23943 | None:intergenic | 45.0% |
| ! | ATGTTAGCTTGAGACCTTGG+TGG | + | tig0027531:23931-23950 | None:intergenic | 45.0% |
| ! | GTGATGTTAGCTTGAGACCT+TGG | + | tig0027531:23934-23953 | None:intergenic | 45.0% |
| CACTTCCGTGACATTAAGGT+GGG | - | tig0027531:23960-23979 | Msa1434460:CDS | 45.0% | |
| CATAGCCCACCTTAATGTCA+CGG | + | tig0027531:23968-23987 | None:intergenic | 45.0% | |
| !! | CGAAGGGTATGTGATGGATA+AGG | + | tig0027531:24187-24206 | None:intergenic | 45.0% |
| AGGGTTGTTAAGGAAGCGAA+GGG | + | tig0027531:24203-24222 | None:intergenic | 45.0% | |
| ! | CCTGAATCAACCGGTTCAAT+TGG | + | tig0027531:24267-24286 | None:intergenic | 45.0% |
| ! | CCAATTGAACCGGTTGATTC+AGG | - | tig0027531:24264-24283 | Msa1434460:intron | 45.0% |
| !! | TTAGTTACAGAGAAGCGTCG+CGG | + | tig0027531:24370-24389 | None:intergenic | 45.0% |
| CATTGTCGAAAAGAGGAAGC+TGG | + | tig0027531:24444-24463 | None:intergenic | 45.0% | |
| ! | CAGCTTCCTCTTTTCGACAA+TGG | - | tig0027531:24442-24461 | Msa1434460:intron | 45.0% |
| AGCCTTTCAAGCCTTTGCTT+CGG | + | tig0027531:24468-24487 | None:intergenic | 45.0% | |
| CAAAGGCTTGAAAGGCTTGA+CGG | - | tig0027531:24471-24490 | Msa1434460:intron | 45.0% | |
| AGACATCTTGCGCTCTTGTT+CGG | - | tig0027531:24500-24519 | Msa1434460:intron | 45.0% | |
| TTGTTCGGAGGTAAGTGTGA+TGG | - | tig0027531:24515-24534 | Msa1434460:intron | 45.0% | |
| CACTTCCATGACATTAAGGC+GGG | + | tig0027531:24741-24760 | None:intergenic | 45.0% | |
| CCACTTCCATGACATTAAGG+CGG | + | tig0027531:24742-24761 | None:intergenic | 45.0% | |
| AAACGCAAGTGTAGGAGTAG+GGG | + | tig0027531:24863-24882 | None:intergenic | 45.0% | |
| CAAACGCAAGTGTAGGAGTA+GGG | + | tig0027531:24864-24883 | None:intergenic | 45.0% | |
| ACAAACGCAAGTGTAGGAGT+AGG | + | tig0027531:24865-24884 | None:intergenic | 45.0% | |
| TGTATTCTTAACCAGTGCCC+CGG | + | tig0027531:25251-25270 | None:intergenic | 45.0% | |
| ATACTTGGCGAGGTCTTTCA+TGG | - | tig0027531:26775-26794 | Msa1434460:intron | 45.0% | |
| TACTTGGCGAGGTCTTTCAT+GGG | - | tig0027531:26776-26795 | Msa1434460:intron | 45.0% | |
| ! | TATACTTGGCTGGTTAACGG+AGG | - | tig0027531:27053-27072 | Msa1434460:intron | 45.0% |
| AAGGAGTTGTGCAGGATCAA+TGG | + | tig0027531:27623-27642 | None:intergenic | 45.0% | |
| TGTACTGCATGCGGAGAAAA+AGG | + | tig0027531:27642-27661 | None:intergenic | 45.0% | |
| GTATGTGTGTGTACTGCATG+CGG | + | tig0027531:27651-27670 | None:intergenic | 45.0% | |
| CTGATCGATCGTTGATATGC+TGG | + | tig0027531:28256-28275 | None:intergenic | 45.0% | |
| TGGTTGGAGTTCGACGAATT+TGG | + | tig0027531:28329-28348 | None:intergenic | 45.0% | |
| AGACCATTGAAGAGAGAGGA+GGG | + | tig0027531:28374-28393 | None:intergenic | 45.0% | |
| TTGGAGACCATTGAAGAGAG+AGG | + | tig0027531:28378-28397 | None:intergenic | 45.0% | |
| CTGGAAGCAATCTACAACTC+AGG | - | tig0027531:28945-28964 | Msa1434460:intron | 45.0% | |
| TTAGGAGCTGGATCTGCAAT+TGG | + | tig0027531:29128-29147 | None:intergenic | 45.0% | |
| !! | GATGAAGATGGATTAGGTGG+TGG | + | tig0027531:29176-29195 | None:intergenic | 45.0% |
| ! | AGAGGCTCTTTGGTGATTAG+AGG | + | tig0027531:29204-29223 | None:intergenic | 45.0% |
| !!! | CTTTTGGTTCGGAGAGATTG+TGG | + | tig0027531:29303-29322 | None:intergenic | 45.0% |
| !!! | TACTAATAATTTATATTTTT+TGG | + | tig0027531:26137-26156 | None:intergenic | 5.0% |
| ACAGAGACTTCGGGTGAAAC+AGG | + | tig0027531:23899-23918 | None:intergenic | 50.0% | |
| TCTGTGACCCAAAACCACCA+AGG | - | tig0027531:23914-23933 | Msa1434460:CDS | 50.0% | |
| !! | GCTTGAGACCTTGGTGGTTT+TGG | + | tig0027531:23925-23944 | None:intergenic | 50.0% |
| CCACCTTAATGTCACGGAAG+TGG | + | tig0027531:23962-23981 | None:intergenic | 50.0% | |
| CCACTTCCGTGACATTAAGG+TGG | - | tig0027531:23959-23978 | Msa1434460:CDS | 50.0% | |
| !! | TGATGATCATGGTGGTGGTG+TGG | + | tig0027531:24156-24175 | None:intergenic | 50.0% |
| GAAGCTGATGATCATGGTGG+TGG | + | tig0027531:24161-24180 | None:intergenic | 50.0% | |
| GTGGAAGCTGATGATCATGG+TGG | + | tig0027531:24164-24183 | None:intergenic | 50.0% | |
| AGGGTGGAAGCTGATGATCA+TGG | + | tig0027531:24167-24186 | None:intergenic | 50.0% | |
| !! | GGGTATGTGATGGATAAGGG+TGG | + | tig0027531:24183-24202 | None:intergenic | 50.0% |
| ! | AGGAAGCGAAGGGTATGTGA+TGG | + | tig0027531:24193-24212 | None:intergenic | 50.0% |
| GAGGGTTGTTAAGGAAGCGA+AGG | + | tig0027531:24204-24223 | None:intergenic | 50.0% | |
| GAAGGATGCGAGGGTTGTTA+AGG | + | tig0027531:24213-24232 | None:intergenic | 50.0% | |
| ! | GGTGTTGAGCCTGAATCAAC+CGG | + | tig0027531:24276-24295 | None:intergenic | 50.0% |
| ! | AAAGAGGAAGCTGGTGCTGA+AGG | + | tig0027531:24435-24454 | None:intergenic | 50.0% |
| CTTCGGCCATTGTCGAAAAG+AGG | + | tig0027531:24451-24470 | None:intergenic | 50.0% | |
| TTCGACAATGGCCGAAGCAA+AGG | - | tig0027531:24454-24473 | Msa1434460:intron | 50.0% | |
| TTCGGAGGTAAGTGTGATGG+CGG | - | tig0027531:24518-24537 | Msa1434460:intron | 50.0% | |
| TGTGTGAGGGAGGAAGCTTA+TGG | - | tig0027531:24609-24628 | Msa1434460:intron | 50.0% | |
| !! | AGGAAGCTTATGGTGGTGGA+CGG | - | tig0027531:24619-24638 | Msa1434460:intron | 50.0% |
| CATAGCCCGCCTTAATGTCA+TGG | - | tig0027531:24733-24752 | Msa1434460:intron | 50.0% | |
| CCGCCTTAATGTCATGGAAG+TGG | - | tig0027531:24739-24758 | Msa1434460:intron | 50.0% | |
| AGGAGTAGGGGTTAGAGTCT+CGG | + | tig0027531:24851-24870 | None:intergenic | 50.0% | |
| TATTCTTAACCAGTGCCCCG+GGG | + | tig0027531:25249-25268 | None:intergenic | 50.0% | |
| GTATTCTTAACCAGTGCCCC+GGG | + | tig0027531:25250-25269 | None:intergenic | 50.0% | |
| TGCCACAATTCAAGGAGGTG+TGG | - | tig0027531:26578-26597 | Msa1434460:intron | 50.0% | |
| AGCCACACCTCCTTGAATTG+TGG | + | tig0027531:26583-26602 | None:intergenic | 50.0% | |
| ! | ACAATTCAAGGAGGTGTGGC+TGG | - | tig0027531:26582-26601 | Msa1434460:intron | 50.0% |
| ! | AAGGAGGTGTGGCTGGAAAT+AGG | - | tig0027531:26589-26608 | Msa1434460:intron | 50.0% |
| GTGTGGCTGGAAATAGGAAG+TGG | - | tig0027531:26595-26614 | Msa1434460:intron | 50.0% | |
| TGGGCAACTACACAACCTTG+CGG | + | tig0027531:26916-26935 | None:intergenic | 50.0% | |
| ! | GGCTGGTTAACGGAGGTTTA+CGG | - | tig0027531:27060-27079 | Msa1434460:intron | 50.0% |
| CGGAGAAAAAGGAGTTGTGC+AGG | + | tig0027531:27631-27650 | None:intergenic | 50.0% | |
| AACCCCTCCTCTCTCTTCAA+TGG | - | tig0027531:28368-28387 | Msa1434460:intron | 50.0% | |
| GACCATTGAAGAGAGAGGAG+GGG | + | tig0027531:28373-28392 | None:intergenic | 50.0% | |
| GAGACCATTGAAGAGAGAGG+AGG | + | tig0027531:28375-28394 | None:intergenic | 50.0% | |
| ! | TTTGGGTTCCATCTTGGCCT+TGG | + | tig0027531:28906-28925 | None:intergenic | 50.0% |
| !! | TCAGGCTTTGGGTTCCATCT+TGG | + | tig0027531:28912-28931 | None:intergenic | 50.0% |
| ! | TGCGGATTTGCTCAGGCTTT+GGG | + | tig0027531:28923-28942 | None:intergenic | 50.0% |
| ! | ATGCGGATTTGCTCAGGCTT+TGG | + | tig0027531:28924-28943 | None:intergenic | 50.0% |
| ! | TCCAGAATGCGGATTTGCTC+AGG | + | tig0027531:28930-28949 | None:intergenic | 50.0% |
| GGGAGAGAGTTATTAGGAGC+TGG | + | tig0027531:29140-29159 | None:intergenic | 50.0% | |
| !! | ATGGATTAGGTGGTGGTGGT+GGG | + | tig0027531:29169-29188 | None:intergenic | 50.0% |
| !! | GAAGATGGATTAGGTGGTGG+TGG | + | tig0027531:29173-29192 | None:intergenic | 50.0% |
| TTTCACTGGGAGAGGCTCTT+TGG | + | tig0027531:29214-29233 | None:intergenic | 50.0% | |
| GCCAATCAGAACATGCCACG+TGG | - | tig0027531:24000-24019 | Msa1434460:CDS | 55.0% | |
| GCCACGTGGCATGTTCTGAT+TGG | + | tig0027531:24004-24023 | None:intergenic | 55.0% | |
| TGCACTGGAGAAGGATGCGA+GGG | + | tig0027531:24222-24241 | None:intergenic | 55.0% | |
| TTGCACTGGAGAAGGATGCG+AGG | + | tig0027531:24223-24242 | None:intergenic | 55.0% | |
| GGCCGAAGCAAAGGCTTGAA+AGG | - | tig0027531:24463-24482 | Msa1434460:intron | 55.0% | |
| AGGCTTGAAAGGCTTGACGG+AGG | - | tig0027531:24474-24493 | Msa1434460:intron | 55.0% | |
| CATCTTGCGCTCTTGTTCGG+AGG | - | tig0027531:24503-24522 | Msa1434460:intron | 55.0% | |
| TCGGAGGTAAGTGTGATGGC+GGG | - | tig0027531:24519-24538 | Msa1434460:intron | 55.0% | |
| GGGTTTGTGATGTGTGAGGG+AGG | - | tig0027531:24599-24618 | Msa1434460:intron | 55.0% | |
| GTGAGGGAGGAAGCTTATGG+TGG | - | tig0027531:24612-24631 | Msa1434460:intron | 55.0% | |
| AGGGAGGAAGCTTATGGTGG+TGG | - | tig0027531:24615-24634 | Msa1434460:intron | 55.0% | |
| GCCACATGGCACGTTCTGAT+TGG | - | tig0027531:24697-24716 | Msa1434460:intron | 55.0% | |
| GCCAATCAGAACGTGCCATG+TGG | + | tig0027531:24701-24720 | None:intergenic | 55.0% | |
| ATTCTTAACCAGTGCCCCGG+GGG | + | tig0027531:25248-25267 | None:intergenic | 55.0% | |
| TATGCTTAACCGGTGCCCCA+GGG | - | tig0027531:25373-25392 | Msa1434460:intron | 55.0% | |
| TGGCGAGGTCTTTCATGGGT+TGG | - | tig0027531:26780-26799 | Msa1434460:intron | 55.0% | |
| GGCGAGGTCTTTCATGGGTT+GGG | - | tig0027531:26781-26800 | Msa1434460:intron | 55.0% | |
| ! | GCGAGGTCTTTCATGGGTTG+GGG | - | tig0027531:26782-26801 | Msa1434460:intron | 55.0% |
| GGGGTGAACTACGATCCACT+TGG | - | tig0027531:26801-26820 | Msa1434460:intron | 55.0% | |
| ATCCTGGACCAAGGCCAAGA+TGG | - | tig0027531:28895-28914 | Msa1434460:intron | 55.0% | |
| !! | TTCCATCTTGGCCTTGGTCC+AGG | + | tig0027531:28900-28919 | None:intergenic | 55.0% |
| GCCTGAGCAAATCCGCATTC+TGG | - | tig0027531:28926-28945 | Msa1434460:intron | 55.0% | |
| !! | GTGGTGGTGGTGGGATTTGT+GGG | + | tig0027531:29160-29179 | None:intergenic | 55.0% |
| !! | GATGGATTAGGTGGTGGTGG+TGG | + | tig0027531:29170-29189 | None:intergenic | 55.0% |
| ! | CGGAGGTAAGTGTGATGGCG+GGG | - | tig0027531:24520-24539 | Msa1434460:intron | 60.0% |
| !! | GGAGGTAAGTGTGATGGCGG+GGG | - | tig0027531:24521-24540 | Msa1434460:intron | 60.0% |
| GAAATGCTAACCGGTGCCCC+CGG | - | tig0027531:25229-25248 | Msa1434460:intron | 60.0% | |
| AAATGCTAACCGGTGCCCCC+GGG | - | tig0027531:25230-25249 | Msa1434460:intron | 60.0% | |
| GTATGCTTAACCGGTGCCCC+AGG | - | tig0027531:25372-25391 | Msa1434460:intron | 60.0% | |
| ATGCTTAACCGGTGCCCCAG+GGG | - | tig0027531:25374-25393 | Msa1434460:intron | 60.0% | |
| TCATGCTAACCGGTGCCCCT+GGG | + | tig0027531:25392-25411 | None:intergenic | 60.0% | |
| !! | GGTGGTGGTGGTGGGATTTG+TGG | + | tig0027531:29161-29180 | None:intergenic | 60.0% |
| TCGCGGCAGCGAAAATGCGG+CGG | + | tig0027531:24353-24372 | None:intergenic | 65.0% | |
| GCGTCGCGGCAGCGAAAATG+CGG | + | tig0027531:24356-24375 | None:intergenic | 65.0% | |
| AATGCTAACCGGTGCCCCCG+GGG | - | tig0027531:25231-25250 | Msa1434460:intron | 65.0% | |
| CATGCTAACCGGTGCCCCTG+GGG | + | tig0027531:25391-25410 | None:intergenic | 65.0% | |
| GTCATGCTAACCGGTGCCCC+TGG | + | tig0027531:25393-25412 | None:intergenic | 65.0% | |
| !! | ATGGCGGGGGTGCTCGTGAG+TGG | - | tig0027531:24534-24553 | Msa1434460:intron | 70.0% |
| ! | AACCAGTGCCCCGGGGGCAC+CGG | + | tig0027531:25242-25261 | None:intergenic | 75.0% |
| ! | AACCGGTGCCCCAGGGGCAC+CGG | - | tig0027531:25380-25399 | Msa1434460:intron | 75.0% |
| AACCGGTGCCCCTGGGGCAC+CGG | + | tig0027531:25385-25404 | None:intergenic | 75.0% | |
| ! | AACCGGTGCCCCCGGGGCAC+TGG | - | tig0027531:25237-25256 | Msa1434460:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027531 | gene | 23887 | 29425 | 23887 | ID=Msa1434460;Name=Msa1434460 |
| tig0027531 | mRNA | 23887 | 29425 | 23887 | ID=Msa1434460-mRNA-1;Parent=Msa1434460;Name=Msa1434460-mRNA-1;_AED=0.42;_eAED=0.84;_QI=0|0|0|1|0|0|3|0|175 |
| tig0027531 | exon | 29421 | 29425 | 29421 | ID=Msa1434460-mRNA-1:exon:9232;Parent=Msa1434460-mRNA-1 |
| tig0027531 | exon | 24277 | 24419 | 24277 | ID=Msa1434460-mRNA-1:exon:9231;Parent=Msa1434460-mRNA-1 |
| tig0027531 | exon | 23887 | 24266 | 23887 | ID=Msa1434460-mRNA-1:exon:9230;Parent=Msa1434460-mRNA-1 |
| tig0027531 | CDS | 29421 | 29425 | 29421 | ID=Msa1434460-mRNA-1:cds;Parent=Msa1434460-mRNA-1 |
| tig0027531 | CDS | 24277 | 24419 | 24277 | ID=Msa1434460-mRNA-1:cds;Parent=Msa1434460-mRNA-1 |
| tig0027531 | CDS | 23887 | 24266 | 23887 | ID=Msa1434460-mRNA-1:cds;Parent=Msa1434460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
