Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1444050 | sp|E0X9N4|C3H69_ARATH | 56.081 | 296 | 94 | 6 | 4 | 269 | 50 | 339 | 8.78e-101 | 302 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1444050 | G7IWL8 | 88.851 | 296 | 3 | 3 | 4 | 269 | 50 | 345 | 0.0 | 525 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1444050 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1444050 | MtrunA17_Chr3g0087891 | 88.851 | 296 | 3 | 3 | 4 | 269 | 50 | 345 | 0.0 | 525 |
| Msa1444050 | MtrunA17_Chr3g0087881 | 52.688 | 186 | 59 | 5 | 87 | 246 | 125 | 307 | 7.46e-56 | 187 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1444050 | AT3G08505.1 | 53.925 | 293 | 77 | 6 | 4 | 269 | 50 | 311 | 9.35e-101 | 298 |
| Msa1444050 | AT3G08505.2 | 53.925 | 293 | 77 | 6 | 4 | 269 | 50 | 311 | 9.35e-101 | 298 |
| Msa1444050 | AT3G08505.3 | 53.925 | 293 | 77 | 6 | 4 | 269 | 50 | 311 | 9.35e-101 | 298 |
Find 88 sgRNAs with CRISPR-Local
Find 536 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGACATGGCGAAATTAT+TGG | 0.152147 | tig0030651:+18943 | None:intergenic |
| CCTGATGTCTTTGGCAATTA+TGG | 0.200868 | tig0030651:+15602 | None:intergenic |
| GAAGCACTTTGAGGAGGTTT+AGG | 0.234779 | tig0030651:-19016 | Msa1444050:five_prime_UTR |
| TTACTTGAGCTTTGCCTTGT+AGG | 0.248432 | tig0030651:+16946 | None:intergenic |
| GACAATGCTTGCATCCTTTC+CGG | 0.265577 | tig0030651:-17303 | Msa1444050:CDS |
| GCGTATCGTGTATTAGAAAT+TGG | 0.271742 | tig0030651:-17108 | Msa1444050:CDS |
| GGAATTTGTCAGGAGACTTT+TGG | 0.272520 | tig0030651:-11147 | Msa1444050:CDS |
| TCTTGATTGAGAAAACAAAA+AGG | 0.290311 | tig0030651:+19037 | None:intergenic |
| AAGAAAGAAAGATTGGAAAT+TGG | 0.291707 | tig0030651:+19194 | None:intergenic |
| AGGTAGCTTTGCGTCATCTT+GGG | 0.329256 | tig0030651:-15641 | Msa1444050:CDS |
| TTGTCGTTCCAAGTGTTATT+TGG | 0.331364 | tig0030651:-17006 | Msa1444050:CDS |
| AAGCACTTTGAGGAGGTTTA+GGG | 0.335451 | tig0030651:-19015 | Msa1444050:five_prime_UTR |
| CGTAGTAGTAACCCAACATT+AGG | 0.336048 | tig0030651:-17085 | Msa1444050:CDS |
| TTGTGCAGATTCTTGATTCC+AGG | 0.338822 | tig0030651:+17474 | None:intergenic |
| GAGGTAGCTTTGCGTCATCT+TGG | 0.340448 | tig0030651:-15642 | Msa1444050:CDS |
| TAAAAGTGCAAATTGTAAAA+TGG | 0.356358 | tig0030651:-11499 | Msa1444050:intron |
| ATTTGTTCATTTGCTGCTGC+TGG | 0.363377 | tig0030651:-17388 | Msa1444050:CDS |
| ATATGTTCTTCTCTTTCTTC+AGG | 0.386226 | tig0030651:+17280 | None:intergenic |
| TTGATTCCAGGCTTGTTCAC+TGG | 0.388041 | tig0030651:+17486 | None:intergenic |
| AAAGAAATGGTTGTGAAGAT+AGG | 0.395041 | tig0030651:+19135 | None:intergenic |
| CTCAATCAAGAAGCACTTTG+AGG | 0.402669 | tig0030651:-19025 | Msa1444050:five_prime_UTR |
| AGAGAGAAACCTGATGTCTT+TGG | 0.415002 | tig0030651:+15593 | None:intergenic |
| TGATTCCAGGCTTGTTCACT+GGG | 0.416070 | tig0030651:+17487 | None:intergenic |
| TTCTTCCCAGTGAACAAGCC+TGG | 0.423135 | tig0030651:-17492 | Msa1444050:CDS |
| ATGAGGAAAGAAAGAAAGAT+TGG | 0.426366 | tig0030651:+19187 | None:intergenic |
| GTTTCAGAATCGGCTGTACT+TGG | 0.435930 | tig0030651:-17583 | Msa1444050:CDS |
| ACGGCAGCTGAGCGTAAGTT+TGG | 0.437819 | tig0030651:-17160 | Msa1444050:CDS |
| ATTATTTACAGGAATTTGTC+AGG | 0.438068 | tig0030651:-11157 | Msa1444050:intron |
| CTGCACAACTTGACTTCCTA+AGG | 0.447330 | tig0030651:-17459 | Msa1444050:CDS |
| TGAAACAAGGGGCTGGTGTT+CGG | 0.458109 | tig0030651:+17600 | None:intergenic |
| TAACATCCATCCCTAATGTT+GGG | 0.466091 | tig0030651:+17074 | None:intergenic |
| CCAGCCCCTTGTTTCAGAAT+CGG | 0.469602 | tig0030651:-17593 | Msa1444050:CDS |
| CGTCATCTTGGGGCTGCAGA+TGG | 0.471622 | tig0030651:-15630 | Msa1444050:CDS |
| TGTTCGGTTATTGAAGAAGA+TGG | 0.473750 | tig0030651:+17616 | None:intergenic |
| GGAAGATGATGTTGTTCAAT+CGG | 0.474976 | tig0030651:-17437 | Msa1444050:intron |
| CCATAATTGCCAAAGACATC+AGG | 0.475198 | tig0030651:-15602 | Msa1444050:intron |
| ACTTTGATCCTAACGCCTCT+TGG | 0.485589 | tig0030651:-18986 | Msa1444050:five_prime_UTR |
| GAACAACATCATCTTCCCTT+AGG | 0.486955 | tig0030651:+17443 | None:intergenic |
| TTAACATCCATCCCTAATGT+TGG | 0.488690 | tig0030651:+17073 | None:intergenic |
| TAAGATAGCTTGCGACAGAT+AGG | 0.489220 | tig0030651:+17031 | None:intergenic |
| CGGTACCAGCTGCTTCTACA+AGG | 0.490373 | tig0030651:-16282 | Msa1444050:intron |
| GCAGCAGCAAATGAACAAAT+CGG | 0.492646 | tig0030651:+17391 | None:intergenic |
| AATATTAACCAAGAGGCGTT+AGG | 0.495686 | tig0030651:+18978 | None:intergenic |
| TGAGACACAACACAGAGGTT+AGG | 0.518491 | tig0030651:+19226 | None:intergenic |
| TCTCTTTCTTCAGGCCGGAA+AGG | 0.522386 | tig0030651:+17289 | None:intergenic |
| CAACACCATTCGATGTAACT+CGG | 0.526387 | tig0030651:+17554 | None:intergenic |
| GTTCTTCTCTTTCTTCAGGC+CGG | 0.528004 | tig0030651:+17284 | None:intergenic |
| TACAGCCGATTCTGAAACAA+GGG | 0.542302 | tig0030651:+17588 | None:intergenic |
| GTAGTAGTAACCCAACATTA+GGG | 0.548465 | tig0030651:-17084 | Msa1444050:CDS |
| GAACAATGTCCTCATGTACA+TGG | 0.552108 | tig0030651:-17349 | Msa1444050:CDS |
| ACACAACACAGAGGTTAGGT+TGG | 0.556767 | tig0030651:+19230 | None:intergenic |
| GGTAGCTTTGCGTCATCTTG+GGG | 0.557694 | tig0030651:-15640 | Msa1444050:CDS |
| TGTTCACTGGGAAGAACAAA+GGG | 0.561359 | tig0030651:+17499 | None:intergenic |
| CCGATTCTGAAACAAGGGGC+TGG | 0.563910 | tig0030651:+17593 | None:intergenic |
| GGATGTTAATAGCACACTGC+GGG | 0.575503 | tig0030651:-17059 | Msa1444050:CDS |
| ATATCGTGATGGCCGTCTTG+AGG | 0.591471 | tig0030651:-15664 | Msa1444050:CDS |
| CAAGCATTGTCTTCCACATG+AGG | 0.592492 | tig0030651:+17315 | None:intergenic |
| TTGTTCACTGGGAAGAACAA+AGG | 0.593124 | tig0030651:+17498 | None:intergenic |
| TAGTAACCCAACATTAGGGA+TGG | 0.597655 | tig0030651:-17080 | Msa1444050:CDS |
| AATACCCGAGTTACATCGAA+TGG | 0.599856 | tig0030651:-17559 | Msa1444050:CDS |
| GGAAATTTATGCCCCTCATG+TGG | 0.606014 | tig0030651:-17328 | Msa1444050:CDS |
| TATTGAAGAAGATGGAGTAG+AGG | 0.608961 | tig0030651:+17624 | None:intergenic |
| AATCAAGAAGCACTTTGAGG+AGG | 0.609077 | tig0030651:-19022 | Msa1444050:five_prime_UTR |
| CATAAATTTCCATGTACATG+AGG | 0.611850 | tig0030651:+17340 | None:intergenic |
| GTAGCATACCAAATAACACT+TGG | 0.613633 | tig0030651:+16998 | None:intergenic |
| AAGCATTGTCTTCCACATGA+GGG | 0.614385 | tig0030651:+17316 | None:intergenic |
| TCGTGATGGCCGTCTTGAGG+AGG | 0.617371 | tig0030651:-15661 | Msa1444050:CDS |
| AACACCATTCGATGTAACTC+GGG | 0.620122 | tig0030651:+17555 | None:intergenic |
| TAATAATAATATTAACCAAG+AGG | 0.624849 | tig0030651:+18971 | None:intergenic |
| AGCATTGTCTTCCACATGAG+GGG | 0.631001 | tig0030651:+17317 | None:intergenic |
| GGAAATCATTGATACCTACA+AGG | 0.631452 | tig0030651:-16960 | Msa1444050:CDS |
| ATAATTTCGCCATGTCAAAG+AGG | 0.631521 | tig0030651:-18940 | Msa1444050:intron |
| AACTTACGCTCAGCTGCCGT+AGG | 0.632534 | tig0030651:+17163 | None:intergenic |
| TGCACAACTTGACTTCCTAA+GGG | 0.633433 | tig0030651:-17458 | Msa1444050:CDS |
| TGAGGACATTGTTCCCCTCG+TGG | 0.637218 | tig0030651:+17358 | None:intergenic |
| GTACAGCCGATTCTGAAACA+AGG | 0.638170 | tig0030651:+17587 | None:intergenic |
| CTGCTGGAAACTGTCCACGA+GGG | 0.638932 | tig0030651:-17372 | Msa1444050:CDS |
| TGCTGGAAACTGTCCACGAG+GGG | 0.639094 | tig0030651:-17371 | Msa1444050:CDS |
| CTAATACACGATACGCAGAA+CGG | 0.640856 | tig0030651:+17115 | None:intergenic |
| TCTATCTTACCTCTTTGACA+TGG | 0.648394 | tig0030651:+18931 | None:intergenic |
| TTGCAGCATGCATATCGTGA+TGG | 0.670081 | tig0030651:-15675 | Msa1444050:intron |
| AAATAAGCAAAAGCATCTCG+AGG | 0.674626 | tig0030651:-17245 | Msa1444050:CDS |
| GCTGCTGGAAACTGTCCACG+AGG | 0.694625 | tig0030651:-17373 | Msa1444050:CDS |
| GCTTTGAAAGAACACGCTCG+AGG | 0.700611 | tig0030651:+17185 | None:intergenic |
| ACAGCCGATTCTGAAACAAG+GGG | 0.720447 | tig0030651:+17589 | None:intergenic |
| GCAAAGCTACCTCCTCAAGA+CGG | 0.724386 | tig0030651:+15652 | None:intergenic |
| TTGAATGAGACACAACACAG+AGG | 0.766563 | tig0030651:+19221 | None:intergenic |
| TGGATGTTAATAGCACACTG+CGG | 0.772501 | tig0030651:-17060 | Msa1444050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGAAAAATATTATTATG+AGG | + | tig0030651:11230-11249 | None:intergenic | 10.0% |
| !! | CTATAATAAAAATAAAATTG+AGG | + | tig0030651:11339-11358 | None:intergenic | 10.0% |
| !!! | TTCTTGATTATTTTTTTATA+TGG | - | tig0030651:11529-11548 | Msa1444050:CDS | 10.0% |
| !!! | TCTTGATTATTTTTTTATAT+GGG | - | tig0030651:11530-11549 | Msa1444050:CDS | 10.0% |
| !!! | TAAAAAAGTATTTATTTTGT+TGG | + | tig0030651:16926-16945 | None:intergenic | 10.0% |
| !! | TAATAATAATATTAACCAAG+AGG | + | tig0030651:11429-11448 | None:intergenic | 15.0% |
| !!! | CTTGATTATTTTTTTATATG+GGG | - | tig0030651:11531-11550 | Msa1444050:CDS | 15.0% |
| !!! | TAGATTTTTTTTTGGATTAT+TGG | - | tig0030651:11692-11711 | Msa1444050:intron | 15.0% |
| !! | TTTATGTAATTAATTGTCTT+TGG | - | tig0030651:12467-12486 | Msa1444050:intron | 15.0% |
| !!! | AATAAACTAAAAACAACTTT+TGG | - | tig0030651:13888-13907 | Msa1444050:intron | 15.0% |
| !!! | TGCAAATTTTAAATATACTT+GGG | + | tig0030651:14574-14593 | None:intergenic | 15.0% |
| !!! | TTGCAAATTTTAAATATACT+TGG | + | tig0030651:14575-14594 | None:intergenic | 15.0% |
| !! | AAGTATAACATAAACTAATT+AGG | + | tig0030651:14700-14719 | None:intergenic | 15.0% |
| !! | AAAGTTAAACTTAAATTGAT+AGG | + | tig0030651:15860-15879 | None:intergenic | 15.0% |
| !! | TCAAAAAATAAAAGACTATT+TGG | + | tig0030651:16996-17015 | None:intergenic | 15.0% |
| !! | AAATTAAAAAAAGACAACTA+TGG | + | tig0030651:17093-17112 | None:intergenic | 15.0% |
| !! | AATATCAAAATATTAATGTC+TGG | + | tig0030651:17913-17932 | None:intergenic | 15.0% |
| !! | AGTAATTAAGAAAATTGAAA+AGG | - | tig0030651:18687-18706 | Msa1444050:intron | 15.0% |
| !! | AATATGTGTAAAAGTTAATT+AGG | - | tig0030651:19098-19117 | Msa1444050:five_prime_UTR | 15.0% |
| !!! | TGAATTTTGTTATTATTTAC+AGG | - | tig0030651:19229-19248 | Msa1444050:five_prime_UTR | 15.0% |
| !! | AAAAGCAAAAGAAAAAGAAA+TGG | + | tig0030651:11278-11297 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTCTTCAATCATG+TGG | - | tig0030651:11611-11630 | Msa1444050:intron | 20.0% |
| !! | TTGATTATAACTCAGAAATT+AGG | - | tig0030651:11652-11671 | Msa1444050:intron | 20.0% |
| !!! | ATGCAAAGTAGATTTTTTTT+TGG | - | tig0030651:11684-11703 | Msa1444050:intron | 20.0% |
| !!! | AGTTTTTTTTTTTGCAAGTT+CGG | - | tig0030651:11910-11929 | Msa1444050:intron | 20.0% |
| !! | AAGTTCGGTAAATAATTATT+CGG | - | tig0030651:11925-11944 | Msa1444050:intron | 20.0% |
| !!! | TTATAGCTTTTGAATTTTCA+CGG | - | tig0030651:12141-12160 | Msa1444050:intron | 20.0% |
| !!! | AAAAGTCTCTAGAATAAAAA+GGG | + | tig0030651:12279-12298 | None:intergenic | 20.0% |
| !!! | AAAAAGTCTCTAGAATAAAA+AGG | + | tig0030651:12280-12299 | None:intergenic | 20.0% |
| !!! | TTTATTCTAGAGACTTTTTA+AGG | - | tig0030651:12281-12300 | Msa1444050:intron | 20.0% |
| !! | ATAACTCAATAACCATAAAT+CGG | + | tig0030651:12627-12646 | None:intergenic | 20.0% |
| !! | ATATTAGATCATGAATCAAT+TGG | + | tig0030651:13527-13546 | None:intergenic | 20.0% |
| !!! | ACTATTATGTTGCTTATATT+AGG | + | tig0030651:13695-13714 | None:intergenic | 20.0% |
| !!! | TTAAGTTGTTTATCCAAATA+GGG | + | tig0030651:13729-13748 | None:intergenic | 20.0% |
| !!! | ATTAAGTTGTTTATCCAAAT+AGG | + | tig0030651:13730-13749 | None:intergenic | 20.0% |
| !! | TTATATCTGAGTTTATATAC+TGG | + | tig0030651:13969-13988 | None:intergenic | 20.0% |
| !!! | TTTTGCTGAAATGTTTATTT+TGG | - | tig0030651:14021-14040 | Msa1444050:intron | 20.0% |
| !! | TTTGGAAAGAAAAGTAAAAT+GGG | + | tig0030651:14191-14210 | None:intergenic | 20.0% |
| !!! | TTTTGGAAAGAAAAGTAAAA+TGG | + | tig0030651:14192-14211 | None:intergenic | 20.0% |
| !!! | AAACAATTGAAATTTGTTCA+CGG | + | tig0030651:14311-14330 | None:intergenic | 20.0% |
| !! | AAACATCATAATTAAACGTT+AGG | + | tig0030651:14620-14639 | None:intergenic | 20.0% |
| !!! | TTCATGATTTCTTTTGTATA+TGG | - | tig0030651:14988-15007 | Msa1444050:intron | 20.0% |
| !!! | TTTTTTTTTTTTTCCTTGAG+CGG | + | tig0030651:15272-15291 | None:intergenic | 20.0% |
| !! | TTAAGCAACTTAAATTCTTA+TGG | + | tig0030651:15306-15325 | None:intergenic | 20.0% |
| !!! | AGAATTTAAGTTGCTTAATT+TGG | - | tig0030651:15308-15327 | Msa1444050:intron | 20.0% |
| !! | CAATGTAATTGAATGAAATA+GGG | + | tig0030651:15391-15410 | None:intergenic | 20.0% |
| !! | TCAATGTAATTGAATGAAAT+AGG | + | tig0030651:15392-15411 | None:intergenic | 20.0% |
| !!! | CAATGAAGTTGATTATTTTT+CGG | - | tig0030651:15732-15751 | Msa1444050:intron | 20.0% |
| !!! | GTTTAACTTTCTTGATTTTT+TGG | - | tig0030651:15870-15889 | Msa1444050:intron | 20.0% |
| !!! | ACAGTCAACTAATATTTTTT+TGG | + | tig0030651:16041-16060 | None:intergenic | 20.0% |
| !! | TTAGACATTATGGAATAAAT+GGG | - | tig0030651:16259-16278 | Msa1444050:intron | 20.0% |
| !! | AAAAATAAAAGACTATTTGG+AGG | + | tig0030651:16993-17012 | None:intergenic | 20.0% |
| !! | ATGATTTCTCAAAATGTAAT+TGG | + | tig0030651:17576-17595 | None:intergenic | 20.0% |
| !! | TATCTACAAATAACTGTAAT+CGG | + | tig0030651:18100-18119 | None:intergenic | 20.0% |
| !!! | TTTTGTTTAATCAGTTTCAA+AGG | - | tig0030651:18836-18855 | Msa1444050:intron | 20.0% |
| !!! | TAAAAGTGCAAATTGTAAAA+TGG | - | tig0030651:18898-18917 | Msa1444050:intron | 20.0% |
| !!! | ATATATATGCTTTTGTACAA+TGG | - | tig0030651:18930-18949 | Msa1444050:intron | 20.0% |
| !!! | ATTTTGTATGCTTCAAAAAT+TGG | + | tig0030651:18974-18993 | None:intergenic | 20.0% |
| !!! | ACATTTACTTTTATGTATTG+TGG | - | tig0030651:19067-19086 | Msa1444050:five_prime_UTR | 20.0% |
| !!! | GTAAACTTAATTTTTATGCT+TGG | - | tig0030651:19170-19189 | Msa1444050:five_prime_UTR | 20.0% |
| ! | AAGAAAGAAAGATTGGAAAT+TGG | + | tig0030651:11206-11225 | None:intergenic | 25.0% |
| !!! | AAAAAAAACCTCACGTTTTT+TGG | - | tig0030651:11310-11329 | Msa1444050:intron | 25.0% |
| ! | CTTGATTGAGAAAACAAAAA+GGG | + | tig0030651:11362-11381 | None:intergenic | 25.0% |
| ! | TCTTGATTGAGAAAACAAAA+AGG | + | tig0030651:11363-11382 | None:intergenic | 25.0% |
| !!! | ATTGGATAAGTTTTTGAAGT+TGG | - | tig0030651:11710-11729 | Msa1444050:intron | 25.0% |
| !! | TTTGAAGTTGGAATTCTATT+AGG | - | tig0030651:11722-11741 | Msa1444050:intron | 25.0% |
| ! | AATTTGATATTTCTCCTATC+TGG | - | tig0030651:11835-11854 | Msa1444050:intron | 25.0% |
| ! | ATTTGATATTTCTCCTATCT+GGG | - | tig0030651:11836-11855 | Msa1444050:intron | 25.0% |
| !!! | TTTCTTTTTGATTGGAATTC+AGG | - | tig0030651:11860-11879 | Msa1444050:intron | 25.0% |
| ! | ATGATATAGCTTATTGAAGT+AGG | - | tig0030651:11951-11970 | Msa1444050:intron | 25.0% |
| ! | TATGCATATGTTTATTTGAG+CGG | - | tig0030651:12068-12087 | Msa1444050:intron | 25.0% |
| ! | AATTCAAAAGCTATAAAGAG+TGG | + | tig0030651:12137-12156 | None:intergenic | 25.0% |
| !!! | AAAGTCTCTAGAATAAAAAG+GGG | + | tig0030651:12278-12297 | None:intergenic | 25.0% |
| ! | GCATGATTAAAATGAATTCA+TGG | + | tig0030651:12344-12363 | None:intergenic | 25.0% |
| ! | ATTGTATCACCAACATTATT+CGG | + | tig0030651:12582-12601 | None:intergenic | 25.0% |
| !! | ATATGCACATTTTATCAGAA+AGG | - | tig0030651:12691-12710 | Msa1444050:intron | 25.0% |
| !! | ACATAAAACTATCTAAGGTT+TGG | + | tig0030651:13553-13572 | None:intergenic | 25.0% |
| ! | ATGCTGAATAAGTTGTTATA+AGG | - | tig0030651:13588-13607 | Msa1444050:intron | 25.0% |
| ! | TGCTGAATAAGTTGTTATAA+GGG | - | tig0030651:13589-13608 | Msa1444050:intron | 25.0% |
| !! | AGTGTTTTCATAAGTTATCT+TGG | - | tig0030651:13853-13872 | Msa1444050:intron | 25.0% |
| ! | ATTTGTTCAATACCATTTGT+AGG | - | tig0030651:14045-14064 | Msa1444050:intron | 25.0% |
| !! | CTATACGATAAGTAAAGTTT+TGG | + | tig0030651:14209-14228 | None:intergenic | 25.0% |
| !! | AATGTCATAAAGCATCAATT+GGG | + | tig0030651:14242-14261 | None:intergenic | 25.0% |
| !! | TAATGTCATAAAGCATCAAT+TGG | + | tig0030651:14243-14262 | None:intergenic | 25.0% |
| ! | TCATAATTAAACGTTAGGTA+GGG | + | tig0030651:14615-14634 | None:intergenic | 25.0% |
| ! | ATCATAATTAAACGTTAGGT+AGG | + | tig0030651:14616-14635 | None:intergenic | 25.0% |
| ! | ATGTATTAAGTTAGCGAAAT+TGG | + | tig0030651:14862-14881 | None:intergenic | 25.0% |
| !! | TTTCCCTAGTATATTGTTTT+AGG | + | tig0030651:15513-15532 | None:intergenic | 25.0% |
| ! | ACAATATACTAGGGAAATAA+AGG | - | tig0030651:15516-15535 | Msa1444050:intron | 25.0% |
| ! | ACTGTATTTATGTGCTATAT+TGG | - | tig0030651:15922-15941 | Msa1444050:intron | 25.0% |
| ! | TATAGATAATCTTAGTGTCT+TGG | - | tig0030651:16137-16156 | Msa1444050:intron | 25.0% |
| ! | GTTAGACATTATGGAATAAA+TGG | - | tig0030651:16258-16277 | Msa1444050:intron | 25.0% |
| !! | TCATTTTCAGCAATCTTTTA+TGG | - | tig0030651:16537-16556 | Msa1444050:intron | 25.0% |
| ! | AGTTTGGAAGTGAAATAATT+AGG | + | tig0030651:16889-16908 | None:intergenic | 25.0% |
| !!! | ACAATTTTTTGATTCCCAAA+TGG | - | tig0030651:17015-17034 | Msa1444050:CDS | 25.0% |
| ! | CAGAATACTTGCATAAAAAA+TGG | - | tig0030651:17164-17183 | Msa1444050:CDS | 25.0% |
| ! | ACTTACCATAAAAATTGAAG+AGG | + | tig0030651:17234-17253 | None:intergenic | 25.0% |
| ! | ATATTCCAACAAAAAAGCTT+CGG | + | tig0030651:17287-17306 | None:intergenic | 25.0% |
| !!! | TGTTGGAATATTAGTTTTGT+TGG | - | tig0030651:17296-17315 | Msa1444050:CDS | 25.0% |
| ! | AGATTGTTTGTACTTTGTAA+TGG | - | tig0030651:17644-17663 | Msa1444050:CDS | 25.0% |
| !! | TACTTTGTAATGGAAAGATT+TGG | - | tig0030651:17654-17673 | Msa1444050:CDS | 25.0% |
| !! | ACTTTGTAATGGAAAGATTT+GGG | - | tig0030651:17655-17674 | Msa1444050:CDS | 25.0% |
| ! | ATCTACAAATAACTGTAATC+GGG | + | tig0030651:18099-18118 | None:intergenic | 25.0% |
| ! | CTTAAAGATATGCTATCATT+GGG | + | tig0030651:18342-18361 | None:intergenic | 25.0% |
| ! | CAATGATAGCATATCTTTAA+GGG | - | tig0030651:18341-18360 | Msa1444050:intron | 25.0% |
| ! | AATACACCAATACATATCAA+GGG | + | tig0030651:18585-18604 | None:intergenic | 25.0% |
| ! | AAATACACCAATACATATCA+AGG | + | tig0030651:18586-18605 | None:intergenic | 25.0% |
| ! | ATGCAAGCAATATTAATTAG+AGG | - | tig0030651:18650-18669 | Msa1444050:intron | 25.0% |
| !! | TTTGCACTTTTATTACATGA+TGG | + | tig0030651:18890-18909 | None:intergenic | 25.0% |
| !! | TTTGAAGCATACAAAATGAA+TGG | - | tig0030651:18977-18996 | Msa1444050:five_prime_UTR | 25.0% |
| !!! | AAAATGAATGGATTGATGAT+TGG | - | tig0030651:18989-19008 | Msa1444050:five_prime_UTR | 25.0% |
| ! | AAAAGTTAATTAGGTCAATG+AGG | - | tig0030651:19107-19126 | Msa1444050:five_prime_UTR | 25.0% |
| ! | ATTATTTACAGGAATTTGTC+AGG | - | tig0030651:19240-19259 | Msa1444050:five_prime_UTR | 25.0% |
| ATGAGGAAAGAAAGAAAGAT+TGG | + | tig0030651:11213-11232 | None:intergenic | 30.0% | |
| AAAGAAATGGTTGTGAAGAT+AGG | + | tig0030651:11265-11284 | None:intergenic | 30.0% | |
| ATCAAAAAGAAAACCCAGAT+AGG | + | tig0030651:11852-11871 | None:intergenic | 30.0% | |
| ! | ATCTGGGTTTTCTTTTTGAT+TGG | - | tig0030651:11852-11871 | Msa1444050:intron | 30.0% |
| TTGATTGGAATTCAGGAATT+AGG | - | tig0030651:11867-11886 | Msa1444050:intron | 30.0% | |
| ATCGACATTAATCCTTATCA+CGG | + | tig0030651:12307-12326 | None:intergenic | 30.0% | |
| ! | CATGGTTAGAAGGTTTTTAA+CGG | - | tig0030651:12386-12405 | Msa1444050:intron | 30.0% |
| !! | AATTGTCTTTGGAATCTTTC+AGG | - | tig0030651:12478-12497 | Msa1444050:intron | 30.0% |
| !! | ATTGTCTTTGGAATCTTTCA+GGG | - | tig0030651:12479-12498 | Msa1444050:intron | 30.0% |
| TGATACAATCTCTTCTATGT+TGG | - | tig0030651:12593-12612 | Msa1444050:intron | 30.0% | |
| CATAAATTTCCATGTACATG+AGG | + | tig0030651:13060-13079 | None:intergenic | 30.0% | |
| ATATGTTCTTCTCTTTCTTC+AGG | + | tig0030651:13120-13139 | None:intergenic | 30.0% | |
| TGCTACAAGTGAAGAAAAAA+TGG | - | tig0030651:13416-13435 | Msa1444050:intron | 30.0% | |
| AAGACATAAATAGATGCTGT+GGG | + | tig0030651:13488-13507 | None:intergenic | 30.0% | |
| CACAGACATAAAACTATCTA+AGG | + | tig0030651:13558-13577 | None:intergenic | 30.0% | |
| ACAACTTATTCAGCATAGTA+TGG | + | tig0030651:13584-13603 | None:intergenic | 30.0% | |
| GCTGAATAAGTTGTTATAAG+GGG | - | tig0030651:13590-13609 | Msa1444050:intron | 30.0% | |
| AAAGTAAAATGGGTCAAACA+GGG | + | tig0030651:14181-14200 | None:intergenic | 30.0% | |
| AAAAGTAAAATGGGTCAAAC+AGG | + | tig0030651:14182-14201 | None:intergenic | 30.0% | |
| CTTTGGTCTCTATATGAAAA+AGG | + | tig0030651:14272-14291 | None:intergenic | 30.0% | |
| GCAAACTGAATTTAGTACTT+TGG | + | tig0030651:14289-14308 | None:intergenic | 30.0% | |
| TAATGACTGCAACTTATTTC+TGG | - | tig0030651:14355-14374 | Msa1444050:intron | 30.0% | |
| TGCAAATTGTTGTCAAATAG+AGG | - | tig0030651:14458-14477 | Msa1444050:intron | 30.0% | |
| CATAATTAAACGTTAGGTAG+GGG | + | tig0030651:14614-14633 | None:intergenic | 30.0% | |
| AAGTTAGCGAAATTGGAAAA+AGG | + | tig0030651:14855-14874 | None:intergenic | 30.0% | |
| AACTTAAATGCATGTTAGCA+AGG | + | tig0030651:14908-14927 | None:intergenic | 30.0% | |
| !! | CTAACATGCATTTAAGTTGA+AGG | - | tig0030651:14910-14929 | Msa1444050:intron | 30.0% |
| TGTGATGTAAGTTTCAAACT+TGG | - | tig0030651:14948-14967 | Msa1444050:intron | 30.0% | |
| GTGATGTAAGTTTCAAACTT+GGG | - | tig0030651:14949-14968 | Msa1444050:intron | 30.0% | |
| !! | TTATTTCTCCACTTTTCAAG+TGG | - | tig0030651:15116-15135 | Msa1444050:intron | 30.0% |
| !! | ATGAGTCGATTTTTATGATG+AGG | - | tig0030651:15464-15483 | Msa1444050:intron | 30.0% |
| AGAGCCTAAAACAATATACT+AGG | - | tig0030651:15506-15525 | Msa1444050:intron | 30.0% | |
| GAGCCTAAAACAATATACTA+GGG | - | tig0030651:15507-15526 | Msa1444050:intron | 30.0% | |
| AGAGTTGTAACACTACTTTA+TGG | + | tig0030651:15544-15563 | None:intergenic | 30.0% | |
| TATACAACTTCACCCTAAAA+AGG | - | tig0030651:15589-15608 | Msa1444050:intron | 30.0% | |
| ATACAACTTCACCCTAAAAA+GGG | - | tig0030651:15590-15609 | Msa1444050:intron | 30.0% | |
| ! | ACCTATCATTTCCCTTTTTA+GGG | + | tig0030651:15604-15623 | None:intergenic | 30.0% |
| ! | TGAAAAATCCATAGAAGTGT+TGG | - | tig0030651:15654-15673 | Msa1444050:CDS | 30.0% |
| AACATTAACCAACACTTCTA+TGG | + | tig0030651:15665-15684 | None:intergenic | 30.0% | |
| GGAAATACATCACTTGATAA+CGG | - | tig0030651:15709-15728 | Msa1444050:intron | 30.0% | |
| !! | TATTTTTCGGTTGAAGAAGA+TGG | - | tig0030651:15745-15764 | Msa1444050:intron | 30.0% |
| GTATTTATGTGCTATATTGG+AGG | - | tig0030651:15925-15944 | Msa1444050:intron | 30.0% | |
| TAACAGGGTTATATCAAGTT+GGG | + | tig0030651:16178-16197 | None:intergenic | 30.0% | |
| AGATCATATGATCAGATAAC+GGG | + | tig0030651:16219-16238 | None:intergenic | 30.0% | |
| GAGATCATATGATCAGATAA+CGG | + | tig0030651:16220-16239 | None:intergenic | 30.0% | |
| TCTCTTACATCAAGTTCTTA+TGG | - | tig0030651:16236-16255 | Msa1444050:intron | 30.0% | |
| GTTCTTATGGTTAGACATTA+TGG | - | tig0030651:16249-16268 | Msa1444050:intron | 30.0% | |
| TTACATTATGCCTTAGAATC+TGG | - | tig0030651:16282-16301 | Msa1444050:intron | 30.0% | |
| TACATTATGCCTTAGAATCT+GGG | - | tig0030651:16283-16302 | Msa1444050:intron | 30.0% | |
| GTGTAGTGCATATAAAGTTA+GGG | + | tig0030651:16338-16357 | None:intergenic | 30.0% | |
| AGTGTAGTGCATATAAAGTT+AGG | + | tig0030651:16339-16358 | None:intergenic | 30.0% | |
| TAACTTTATATGCACTACAC+TGG | - | tig0030651:16338-16357 | Msa1444050:intron | 30.0% | |
| CTAGTATGATATTGGACATT+CGG | - | tig0030651:16480-16499 | Msa1444050:intron | 30.0% | |
| CAACATTCTTCATCTCATAA+AGG | + | tig0030651:16563-16582 | None:intergenic | 30.0% | |
| CTTTATGAGATGAAGAATGT+TGG | - | tig0030651:16561-16580 | Msa1444050:intron | 30.0% | |
| TTGTCAAATAATGGCTATAG+TGG | + | tig0030651:16714-16733 | None:intergenic | 30.0% | |
| !! | AACGAAGTGTTGTCAAATAA+TGG | + | tig0030651:16723-16742 | None:intergenic | 30.0% |
| ACAACACTAGGTTTAACATT+AGG | - | tig0030651:16838-16857 | Msa1444050:intron | 30.0% | |
| CAACACTAGGTTTAACATTA+GGG | - | tig0030651:16839-16858 | Msa1444050:intron | 30.0% | |
| ! | AAGCTCCTCTTCAATTTTTA+TGG | - | tig0030651:17226-17245 | Msa1444050:CDS | 30.0% |
| AGAACATTGTGTAAAATGAG+TGG | + | tig0030651:17360-17379 | None:intergenic | 30.0% | |
| CGATTATGTTTCAGAAAGTT+AGG | - | tig0030651:17410-17429 | Msa1444050:intron | 30.0% | |
| GTACAAACAATCTTAAACCT+TGG | + | tig0030651:17637-17656 | None:intergenic | 30.0% | |
| AATGGAAAGATTTGGGTAAA+AGG | - | tig0030651:17662-17681 | Msa1444050:intron | 30.0% | |
| ! | AACCTTAGGTTTGATTTAGA+AGG | - | tig0030651:17764-17783 | Msa1444050:intron | 30.0% |
| TTCCTTCAGTGAAAAAACTA+GGG | + | tig0030651:17858-17877 | None:intergenic | 30.0% | |
| ATCACCATAGAGAAGAAATT+TGG | - | tig0030651:17953-17972 | Msa1444050:intron | 30.0% | |
| TCACCATAGAGAAGAAATTT+GGG | - | tig0030651:17954-17973 | Msa1444050:intron | 30.0% | |
| TTTCCCAAATTTCTTCTCTA+TGG | + | tig0030651:17960-17979 | None:intergenic | 30.0% | |
| AGTAAGAAAACTGTTTGCAA+GGG | - | tig0030651:18003-18022 | Msa1444050:intron | 30.0% | |
| AGAGAATAATCTGTACACAA+TGG | + | tig0030651:18264-18283 | None:intergenic | 30.0% | |
| CCTTAAAGATATGCTATCAT+TGG | + | tig0030651:18343-18362 | None:intergenic | 30.0% | |
| CCAATGATAGCATATCTTTA+AGG | - | tig0030651:18340-18359 | Msa1444050:intron | 30.0% | |
| GTCATTATACACATAGCAAA+AGG | - | tig0030651:18433-18452 | Msa1444050:intron | 30.0% | |
| ! | CCAGATAGGTCAATTATTTT+CGG | + | tig0030651:18499-18518 | None:intergenic | 30.0% |
| ATAGTACCCTTGATATGTAT+TGG | - | tig0030651:18576-18595 | Msa1444050:intron | 30.0% | |
| AAATGCATAGTAGAATATGC+TGG | - | tig0030651:18617-18636 | Msa1444050:intron | 30.0% | |
| ATAGTAGAATATGCTGGATT+GGG | - | tig0030651:18623-18642 | Msa1444050:intron | 30.0% | |
| GAAAATTGAAAAGGTCAAGA+CGG | - | tig0030651:18696-18715 | Msa1444050:intron | 30.0% | |
| GCAAATTGTAAAATGGTAGA+TGG | - | tig0030651:18905-18924 | Msa1444050:intron | 30.0% | |
| CTTCAAAAATTGGAGCTTAT+TGG | + | tig0030651:18964-18983 | None:intergenic | 30.0% | |
| !! | AATATTAACCAAGAGGCGTT+AGG | + | tig0030651:11422-11441 | None:intergenic | 35.0% |
| CTTTGACATGGCGAAATTAT+TGG | + | tig0030651:11457-11476 | None:intergenic | 35.0% | |
| ATAATTTCGCCATGTCAAAG+AGG | - | tig0030651:11457-11476 | Msa1444050:intron | 35.0% | |
| TCTATCTTACCTCTTTGACA+TGG | + | tig0030651:11469-11488 | None:intergenic | 35.0% | |
| ATTGAAGTAGGAACACAATC+AGG | - | tig0030651:11963-11982 | Msa1444050:intron | 35.0% | |
| ATCTTGGAAATATCTCTCCT+CGG | - | tig0030651:12036-12055 | Msa1444050:intron | 35.0% | |
| ! | ATGCTTTGTGTTTTCGTTTG+CGG | - | tig0030651:12360-12379 | Msa1444050:intron | 35.0% |
| CTTTGTAAGTTCTTTGCTCA+TGG | - | tig0030651:12504-12523 | Msa1444050:intron | 35.0% | |
| ! | ATTGTGAGTTTTCTCATGAC+TGG | - | tig0030651:12547-12566 | Msa1444050:intron | 35.0% |
| TATCACCAACATTATTCGGA+GGG | + | tig0030651:12578-12597 | None:intergenic | 35.0% | |
| !! | TTGGACATTTCACCGATTTA+TGG | - | tig0030651:12612-12631 | Msa1444050:intron | 35.0% |
| TATTGAAGAAGATGGAGTAG+AGG | + | tig0030651:12776-12795 | None:intergenic | 35.0% | |
| TGTTCGGTTATTGAAGAAGA+TGG | + | tig0030651:12784-12803 | None:intergenic | 35.0% | |
| GGAAGATGATGTTGTTCAAT+CGG | - | tig0030651:12960-12979 | Msa1444050:intron | 35.0% | |
| !! | AAATAAGCAAAAGCATCTCG+AGG | - | tig0030651:13152-13171 | Msa1444050:intron | 35.0% |
| GCGTATCGTGTATTAGAAAT+TGG | - | tig0030651:13289-13308 | Msa1444050:intron | 35.0% | |
| GTAGTAGTAACCCAACATTA+GGG | - | tig0030651:13313-13332 | Msa1444050:intron | 35.0% | |
| TAACATCCATCCCTAATGTT+GGG | + | tig0030651:13326-13345 | None:intergenic | 35.0% | |
| TTAACATCCATCCCTAATGT+TGG | + | tig0030651:13327-13346 | None:intergenic | 35.0% | |
| ! | TTGTCGTTCCAAGTGTTATT+TGG | - | tig0030651:13391-13410 | Msa1444050:intron | 35.0% |
| GTAGCATACCAAATAACACT+TGG | + | tig0030651:13402-13421 | None:intergenic | 35.0% | |
| GGAAATCATTGATACCTACA+AGG | - | tig0030651:13437-13456 | Msa1444050:intron | 35.0% | |
| GAAGACATAAATAGATGCTG+TGG | + | tig0030651:13489-13508 | None:intergenic | 35.0% | |
| !! | TAGCATTGATATGCATGTGT+AGG | - | tig0030651:13630-13649 | Msa1444050:intron | 35.0% |
| !! | AGCATTGATATGCATGTGTA+GGG | - | tig0030651:13631-13650 | Msa1444050:intron | 35.0% |
| GCAAAAAGCTAGACACATTA+GGG | + | tig0030651:14007-14026 | None:intergenic | 35.0% | |
| AGCAAAAAGCTAGACACATT+AGG | + | tig0030651:14008-14027 | None:intergenic | 35.0% | |
| GCAATCAATTGACCTACAAA+TGG | + | tig0030651:14060-14079 | None:intergenic | 35.0% | |
| !!! | GATTGCAAGCATTTTGACTT+TGG | - | tig0030651:14074-14093 | Msa1444050:intron | 35.0% |
| GGTATAGCACTATAGTGTAA+GGG | - | tig0030651:14498-14517 | Msa1444050:intron | 35.0% | |
| GGTACTAGTATTATCAATCG+CGG | + | tig0030651:14553-14572 | None:intergenic | 35.0% | |
| ! | TAGGCTCTAGTTGTTCTTTA+AGG | + | tig0030651:14681-14700 | None:intergenic | 35.0% |
| TAAAGATGAGAACCAGGATA+AGG | + | tig0030651:14831-14850 | None:intergenic | 35.0% | |
| AAAGGATAAAGATGAGAACC+AGG | + | tig0030651:14837-14856 | None:intergenic | 35.0% | |
| ACTTAATACATGATGCCATC+AGG | - | tig0030651:14871-14890 | Msa1444050:intron | 35.0% | |
| !! | CATGCATTTAAGTTGAAGGT+CGG | - | tig0030651:14914-14933 | Msa1444050:intron | 35.0% |
| TTGTATCCAATGCTTCAACA+TGG | - | tig0030651:15034-15053 | Msa1444050:intron | 35.0% | |
| ! | TATCTATGCCACTTGAAAAG+TGG | + | tig0030651:15127-15146 | None:intergenic | 35.0% |
| GCATAGATAAATTGCACCTT+GGG | - | tig0030651:15138-15157 | Msa1444050:intron | 35.0% | |
| ! | TACAACTAAGCTATTTCCCA+AGG | + | tig0030651:15157-15176 | None:intergenic | 35.0% |
| TTGGGAAATAGCTTAGTTGT+AGG | - | tig0030651:15156-15175 | Msa1444050:intron | 35.0% | |
| !!! | TTTTTTTTCCTTGAGCGGTA+TGG | + | tig0030651:15267-15286 | None:intergenic | 35.0% |
| ACATTGATGAGTGCAACAAA+TGG | - | tig0030651:15405-15424 | Msa1444050:intron | 35.0% | |
| ATGATGAGGACACACTAAAT+TGG | - | tig0030651:15478-15497 | Msa1444050:intron | 35.0% | |
| TGATGAGGACACACTAAATT+GGG | - | tig0030651:15479-15498 | Msa1444050:intron | 35.0% | |
| ACCCTAAAAAGGGAAATGAT+AGG | - | tig0030651:15600-15619 | Msa1444050:intron | 35.0% | |
| ! | CACCTATCATTTCCCTTTTT+AGG | + | tig0030651:15605-15624 | None:intergenic | 35.0% |
| CTAAAAAGGGAAATGATAGG+TGG | - | tig0030651:15603-15622 | Msa1444050:CDS | 35.0% | |
| ATTTCCATCTACTTCTGCTT+TGG | + | tig0030651:15695-15714 | None:intergenic | 35.0% | |
| !! | CGTCATTTTCATCAAGTTCA+AGG | + | tig0030651:15789-15808 | None:intergenic | 35.0% |
| CAAGTGTTCTCAATGATAGA+TGG | + | tig0030651:15966-15985 | None:intergenic | 35.0% | |
| ACTTGTTCGTAGCAAGAATA+AGG | - | tig0030651:15981-16000 | Msa1444050:intron | 35.0% | |
| ! | AAGTTGGGGTATCACAATTT+CGG | + | tig0030651:16163-16182 | None:intergenic | 35.0% |
| ! | AACAGGGTTATATCAAGTTG+GGG | + | tig0030651:16177-16196 | None:intergenic | 35.0% |
| CTAACAGGGTTATATCAAGT+TGG | + | tig0030651:16179-16198 | None:intergenic | 35.0% | |
| ACTTGATATAACCCTGTTAG+TGG | - | tig0030651:16179-16198 | Msa1444050:intron | 35.0% | |
| !! | GGGTTTTGTAAGATTGAGTT+AGG | + | tig0030651:16314-16333 | None:intergenic | 35.0% |
| AGTGCATATAAAGTTAGGGA+GGG | + | tig0030651:16334-16353 | None:intergenic | 35.0% | |
| TAGTGCATATAAAGTTAGGG+AGG | + | tig0030651:16335-16354 | None:intergenic | 35.0% | |
| AACCAAATGCCGTAATTAGA+CGG | - | tig0030651:16407-16426 | Msa1444050:intron | 35.0% | |
| ! | AAGGAAGCACATCATTTCTT+TGG | - | tig0030651:16512-16531 | Msa1444050:intron | 35.0% |
| ! | AGGAAGCACATCATTTCTTT+GGG | - | tig0030651:16513-16532 | Msa1444050:intron | 35.0% |
| ATGATCAAAGAAAGAGACCA+TGG | - | tig0030651:16610-16629 | Msa1444050:intron | 35.0% | |
| ATAGCGTGTTGTGGAATAAT+AGG | - | tig0030651:16747-16766 | Msa1444050:intron | 35.0% | |
| CATTTGCCAAATAGCAGATA+TGG | + | tig0030651:16818-16837 | None:intergenic | 35.0% | |
| ATTTGGCAAATGACAACACT+AGG | - | tig0030651:16826-16845 | Msa1444050:intron | 35.0% | |
| AAGTGAAGAAGCAACCATTT+GGG | + | tig0030651:17032-17051 | None:intergenic | 35.0% | |
| AAAGTGAAGAAGCAACCATT+TGG | + | tig0030651:17033-17052 | None:intergenic | 35.0% | |
| GGAAGCTATTAAGACAACTA+TGG | + | tig0030651:17131-17150 | None:intergenic | 35.0% | |
| CTTCTTGTGAATTGACATCA+AGG | + | tig0030651:17322-17341 | None:intergenic | 35.0% | |
| TCTCATATAAAGCTAGGTGA+GGG | + | tig0030651:17454-17473 | None:intergenic | 35.0% | |
| ACGTACTCTCATATAAAGCT+AGG | + | tig0030651:17460-17479 | None:intergenic | 35.0% | |
| ! | GACATGCTTTATTCATGTCA+TGG | - | tig0030651:17480-17499 | Msa1444050:CDS | 35.0% |
| TAAATACCGCTTAAGATCCA+AGG | - | tig0030651:17617-17636 | Msa1444050:CDS | 35.0% | |
| CTTAAACCTTGGATCTTAAG+CGG | + | tig0030651:17626-17645 | None:intergenic | 35.0% | |
| ! | AAAGGTAGAAAGTACATCCA+TGG | - | tig0030651:17680-17699 | Msa1444050:intron | 35.0% |
| ! | AAGGTAGAAAGTACATCCAT+GGG | - | tig0030651:17681-17700 | Msa1444050:intron | 35.0% |
| CTCATACTACAACTAACCTT+AGG | - | tig0030651:17750-17769 | Msa1444050:intron | 35.0% | |
| CACCTTCTAAATCAAACCTA+AGG | + | tig0030651:17769-17788 | None:intergenic | 35.0% | |
| GGGATTGTGAAGAGAAAAAT+AGG | + | tig0030651:17792-17811 | None:intergenic | 35.0% | |
| CTTCCTTCAGTGAAAAAACT+AGG | + | tig0030651:17859-17878 | None:intergenic | 35.0% | |
| GAACTTGATGAAATAGTCCT+TGG | - | tig0030651:17882-17901 | Msa1444050:intron | 35.0% | |
| GAGTAAGAAAACTGTTTGCA+AGG | - | tig0030651:18002-18021 | Msa1444050:intron | 35.0% | |
| CAAGGGAAATTGTCTATCAT+GGG | - | tig0030651:18020-18039 | Msa1444050:intron | 35.0% | |
| GAAATTGTCTATCATGGGTT+TGG | - | tig0030651:18025-18044 | Msa1444050:intron | 35.0% | |
| !! | CGTAGTATTTGTGCTATTTG+AGG | + | tig0030651:18147-18166 | None:intergenic | 35.0% |
| AGTGTTAAGGCAAACCTTAA+GGG | + | tig0030651:18202-18221 | None:intergenic | 35.0% | |
| CATAAAAGCTGTCAAACACA+TGG | + | tig0030651:18235-18254 | None:intergenic | 35.0% | |
| ! | CATGTGTTTGACAGCTTTTA+TGG | - | tig0030651:18233-18252 | Msa1444050:intron | 35.0% |
| GCCAAAACAGTAAATGGAAA+GGG | + | tig0030651:18301-18320 | None:intergenic | 35.0% | |
| AGCCAAAACAGTAAATGGAA+AGG | + | tig0030651:18302-18321 | None:intergenic | 35.0% | |
| AGAAGAGCCAAAACAGTAAA+TGG | + | tig0030651:18307-18326 | None:intergenic | 35.0% | |
| ! | GCATATCTTTAAGGGAGATA+TGG | - | tig0030651:18349-18368 | Msa1444050:intron | 35.0% |
| TTAGGACGACAAGTGAATAA+GGG | + | tig0030651:18392-18411 | None:intergenic | 35.0% | |
| ! | TTTAGGACGACAAGTGAATA+AGG | + | tig0030651:18393-18412 | None:intergenic | 35.0% |
| ! | CTCTAGATTCCTTCTTGTTT+AGG | + | tig0030651:18410-18429 | None:intergenic | 35.0% |
| ! | GTCAATTATTTTCGGACTGA+GGG | + | tig0030651:18491-18510 | None:intergenic | 35.0% |
| CCGAAAATAATTGACCTATC+TGG | - | tig0030651:18496-18515 | Msa1444050:intron | 35.0% | |
| TATGTGTGAAATGACCAGAT+AGG | + | tig0030651:18513-18532 | None:intergenic | 35.0% | |
| CATAGTAGAATATGCTGGAT+TGG | - | tig0030651:18622-18641 | Msa1444050:intron | 35.0% | |
| ! | TTAGAGCATCTTAATCGCTA+GGG | + | tig0030651:18736-18755 | None:intergenic | 35.0% |
| ! | TTTAGAGCATCTTAATCGCT+AGG | + | tig0030651:18737-18756 | None:intergenic | 35.0% |
| ! | AACTACAGTGTACACCATTT+TGG | - | tig0030651:19019-19038 | Msa1444050:five_prime_UTR | 35.0% |
| !! | TGTACACCATTTTGGTCATA+TGG | - | tig0030651:19027-19046 | Msa1444050:five_prime_UTR | 35.0% |
| !! | GTACACCATTTTGGTCATAT+GGG | - | tig0030651:19028-19047 | Msa1444050:five_prime_UTR | 35.0% |
| !! | TACACCATTTTGGTCATATG+GGG | - | tig0030651:19029-19048 | Msa1444050:five_prime_UTR | 35.0% |
| ATTGTTGATCCCAAGATTCT+TGG | + | tig0030651:19206-19225 | None:intergenic | 35.0% | |
| ! | GAATTTGTCAGGAGACTTTT+GGG | - | tig0030651:19251-19270 | Msa1444050:five_prime_UTR | 35.0% |
| ! | AATTTGTCAGGAGACTTTTG+GGG | - | tig0030651:19252-19271 | Msa1444050:five_prime_UTR | 35.0% |
| TTGAATGAGACACAACACAG+AGG | + | tig0030651:11179-11198 | None:intergenic | 40.0% | |
| !! | CTCAATCAAGAAGCACTTTG+AGG | - | tig0030651:11372-11391 | Msa1444050:intron | 40.0% |
| !! | AATCAAGAAGCACTTTGAGG+AGG | - | tig0030651:11375-11394 | Msa1444050:intron | 40.0% |
| ! | AAGCACTTTGAGGAGGTTTA+GGG | - | tig0030651:11382-11401 | Msa1444050:intron | 40.0% |
| ACATCACAAGGCAACTAAAG+AGG | + | tig0030651:11999-12018 | None:intergenic | 40.0% | |
| TTAGTTGCCTTGTGATGTTG+AGG | - | tig0030651:12001-12020 | Msa1444050:intron | 40.0% | |
| TCTTGGAAATATCTCTCCTC+GGG | - | tig0030651:12037-12056 | Msa1444050:intron | 40.0% | |
| TTTGAGCGGTGAAAAACTTG+CGG | - | tig0030651:12082-12101 | Msa1444050:intron | 40.0% | |
| GACATACATAGCGAGTGTTT+GGG | + | tig0030651:12210-12229 | None:intergenic | 40.0% | |
| AGACATACATAGCGAGTGTT+TGG | + | tig0030651:12211-12230 | None:intergenic | 40.0% | |
| ! | TCTAGAATAAAAAGGGGCAC+CGG | + | tig0030651:12272-12291 | None:intergenic | 40.0% |
| !!! | GACTTTTTAAGGCCGTGATA+AGG | - | tig0030651:12292-12311 | Msa1444050:intron | 40.0% |
| ! | TGTTTTCGTTTGCGGAAACA+TGG | - | tig0030651:12368-12387 | Msa1444050:intron | 40.0% |
| TTTGCGGAAACATGGTTAGA+AGG | - | tig0030651:12376-12395 | Msa1444050:intron | 40.0% | |
| ATAAGAACAGTCTGCACACA+AGG | + | tig0030651:12448-12467 | None:intergenic | 40.0% | |
| ATCACCAACATTATTCGGAG+GGG | + | tig0030651:12577-12596 | None:intergenic | 40.0% | |
| GTATCACCAACATTATTCGG+AGG | + | tig0030651:12579-12598 | None:intergenic | 40.0% | |
| CAGAAAGGAGTTTGTGCTTA+TGG | - | tig0030651:12706-12725 | Msa1444050:intron | 40.0% | |
| !! | TACAGCCGATTCTGAAACAA+GGG | + | tig0030651:12812-12831 | None:intergenic | 40.0% |
| AATACCCGAGTTACATCGAA+TGG | - | tig0030651:12838-12857 | Msa1444050:intron | 40.0% | |
| AACACCATTCGATGTAACTC+GGG | + | tig0030651:12845-12864 | None:intergenic | 40.0% | |
| CAACACCATTCGATGTAACT+CGG | + | tig0030651:12846-12865 | None:intergenic | 40.0% | |
| TGTTCACTGGGAAGAACAAA+GGG | + | tig0030651:12901-12920 | None:intergenic | 40.0% | |
| TTGTTCACTGGGAAGAACAA+AGG | + | tig0030651:12902-12921 | None:intergenic | 40.0% | |
| TTGTGCAGATTCTTGATTCC+AGG | + | tig0030651:12926-12945 | None:intergenic | 40.0% | |
| TGCACAACTTGACTTCCTAA+GGG | - | tig0030651:12939-12958 | Msa1444050:intron | 40.0% | |
| GAACAACATCATCTTCCCTT+AGG | + | tig0030651:12957-12976 | None:intergenic | 40.0% | |
| GCAGCAGCAAATGAACAAAT+CGG | + | tig0030651:13009-13028 | None:intergenic | 40.0% | |
| ! | ATTTGTTCATTTGCTGCTGC+TGG | - | tig0030651:13009-13028 | Msa1444050:intron | 40.0% |
| GAACAATGTCCTCATGTACA+TGG | - | tig0030651:13048-13067 | Msa1444050:intron | 40.0% | |
| ! | AAGCATTGTCTTCCACATGA+GGG | + | tig0030651:13084-13103 | None:intergenic | 40.0% |
| CTAATACACGATACGCAGAA+CGG | + | tig0030651:13285-13304 | None:intergenic | 40.0% | |
| CGTAGTAGTAACCCAACATT+AGG | - | tig0030651:13312-13331 | Msa1444050:intron | 40.0% | |
| TAGTAACCCAACATTAGGGA+TGG | - | tig0030651:13317-13336 | Msa1444050:intron | 40.0% | |
| TGGATGTTAATAGCACACTG+CGG | - | tig0030651:13337-13356 | Msa1444050:intron | 40.0% | |
| ! | TAAGATAGCTTGCGACAGAT+AGG | + | tig0030651:13369-13388 | None:intergenic | 40.0% |
| TTACTTGAGCTTTGCCTTGT+AGG | + | tig0030651:13454-13473 | None:intergenic | 40.0% | |
| ! | GCATTGATATGCATGTGTAG+GGG | - | tig0030651:13632-13651 | Msa1444050:intron | 40.0% |
| AAGCATGTGTGAGACTGTTT+GGG | + | tig0030651:13943-13962 | None:intergenic | 40.0% | |
| TAAGCATGTGTGAGACTGTT+TGG | + | tig0030651:13944-13963 | None:intergenic | 40.0% | |
| !! | TAGACACATTAGGGCTAGTT+TGG | + | tig0030651:13998-14017 | None:intergenic | 40.0% |
| !!! | AAGCATTTTGACTTTGGCGA+AGG | - | tig0030651:14080-14099 | Msa1444050:intron | 40.0% |
| ATTTACCTTGTAGAAGCAGC+TGG | + | tig0030651:14123-14142 | None:intergenic | 40.0% | |
| TAAAATGGGTCAAACAGGGA+GGG | + | tig0030651:14177-14196 | None:intergenic | 40.0% | |
| ! | AAGTTGCAGTCATTAGCTTC+AGG | + | tig0030651:14350-14369 | None:intergenic | 40.0% |
| CGGTATAGCACTATAGTGTA+AGG | - | tig0030651:14497-14516 | Msa1444050:intron | 40.0% | |
| CCTGATGTCTTTGGCAATTA+TGG | + | tig0030651:14798-14817 | None:intergenic | 40.0% | |
| CCATAATTGCCAAAGACATC+AGG | - | tig0030651:14795-14814 | Msa1444050:intron | 40.0% | |
| AGAGAGAAACCTGATGTCTT+TGG | + | tig0030651:14807-14826 | None:intergenic | 40.0% | |
| GGCATAGATAAATTGCACCT+TGG | - | tig0030651:15137-15156 | Msa1444050:intron | 40.0% | |
| !! | ATGATAGGTGGTTGATGATG+AGG | - | tig0030651:15615-15634 | Msa1444050:CDS | 40.0% |
| !! | GGTTGATGATGAGGAATTTG+AGG | - | tig0030651:15624-15643 | Msa1444050:CDS | 40.0% |
| GATGAGGAATTTGAGGAGAA+TGG | - | tig0030651:15631-15650 | Msa1444050:CDS | 40.0% | |
| TTGTCCAAAGCAGAAGTAGA+TGG | - | tig0030651:15688-15707 | Msa1444050:intron | 40.0% | |
| GTGTTCTCAATGATAGATGG+CGG | + | tig0030651:15963-15982 | None:intergenic | 40.0% | |
| TTAGTTGACTGTAGCTGTGT+TGG | - | tig0030651:16049-16068 | Msa1444050:intron | 40.0% | |
| TAACAAGGTCACCACTAACA+GGG | + | tig0030651:16193-16212 | None:intergenic | 40.0% | |
| !! | TCAGATAACGGGTTGTAACA+AGG | + | tig0030651:16208-16227 | None:intergenic | 40.0% |
| ACTACACTGGTCATATCTCT+AGG | - | tig0030651:16351-16370 | Msa1444050:intron | 40.0% | |
| CATATCTCTAGGCAATGTGA+AGG | - | tig0030651:16362-16381 | Msa1444050:intron | 40.0% | |
| ATCCGTCTAATTACGGCATT+TGG | + | tig0030651:16412-16431 | None:intergenic | 40.0% | |
| AATGCCGTAATTAGACGGAT+AGG | - | tig0030651:16412-16431 | Msa1444050:intron | 40.0% | |
| ATGCCGTAATTAGACGGATA+GGG | - | tig0030651:16413-16432 | Msa1444050:intron | 40.0% | |
| AGGCGGAATTTCCAACATTA+TGG | - | tig0030651:16450-16469 | Msa1444050:intron | 40.0% | |
| GGCGGAATTTCCAACATTAT+GGG | - | tig0030651:16451-16470 | Msa1444050:intron | 40.0% | |
| GCGGAATTTCCAACATTATG+GGG | - | tig0030651:16452-16471 | Msa1444050:intron | 40.0% | |
| CGGAATTTCCAACATTATGG+GGG | - | tig0030651:16453-16472 | Msa1444050:intron | 40.0% | |
| TGATATTGGACATTCGGACT+AGG | - | tig0030651:16486-16505 | Msa1444050:intron | 40.0% | |
| ! | GGAAGCACATCATTTCTTTG+GGG | - | tig0030651:16514-16533 | Msa1444050:intron | 40.0% |
| ! | TCACAACACTGATTAGACCA+TGG | + | tig0030651:16630-16649 | None:intergenic | 40.0% |
| ! | TCGTTCTAAATAGCGTGTTG+TGG | - | tig0030651:16738-16757 | Msa1444050:intron | 40.0% |
| ! | GCTAAGGCGCTATAGATTAA+CGG | + | tig0030651:16791-16810 | None:intergenic | 40.0% |
| TTGCCAAATAGCAGATATGG+CGG | + | tig0030651:16815-16834 | None:intergenic | 40.0% | |
| GGATAGCAGCAATCTAAGTT+TGG | + | tig0030651:16905-16924 | None:intergenic | 40.0% | |
| TCATATAAAGCTAGGTGAGG+GGG | + | tig0030651:17452-17471 | None:intergenic | 40.0% | |
| CTCATATAAAGCTAGGTGAG+GGG | + | tig0030651:17453-17472 | None:intergenic | 40.0% | |
| CTCTCATATAAAGCTAGGTG+AGG | + | tig0030651:17455-17474 | None:intergenic | 40.0% | |
| ! | AGGTAGAAAGTACATCCATG+GGG | - | tig0030651:17682-17701 | Msa1444050:intron | 40.0% |
| !! | ATGTTCTAAGAACTCCAGAG+AGG | + | tig0030651:17726-17745 | None:intergenic | 40.0% |
| TTCACAATCCCATTGTGATG+TGG | - | tig0030651:17801-17820 | Msa1444050:intron | 40.0% | |
| TCACAACACCACATCACAAT+GGG | + | tig0030651:17812-17831 | None:intergenic | 40.0% | |
| !!! | TGCCCTAGTTTTTTCACTGA+AGG | - | tig0030651:17853-17872 | Msa1444050:intron | 40.0% |
| ATTAATGTCTGGCAATGCCA+AGG | + | tig0030651:17902-17921 | None:intergenic | 40.0% | |
| GCAAGGGAAATTGTCTATCA+TGG | - | tig0030651:18019-18038 | Msa1444050:intron | 40.0% | |
| ! | TTGTCTATCATGGGTTTGGT+CGG | - | tig0030651:18029-18048 | Msa1444050:intron | 40.0% |
| CAGTGTTAAGGCAAACCTTA+AGG | + | tig0030651:18203-18222 | None:intergenic | 40.0% | |
| GTTTGCCTTAACACTGAACT+TGG | - | tig0030651:18207-18226 | Msa1444050:intron | 40.0% | |
| ! | GCCCTTTCCATTTACTGTTT+TGG | - | tig0030651:18297-18316 | Msa1444050:intron | 40.0% |
| ! | TCTTTAAGGGAGATATGGTC+AGG | - | tig0030651:18354-18373 | Msa1444050:intron | 40.0% |
| ATATGGTCAGGTCATTCTTG+TGG | - | tig0030651:18366-18385 | Msa1444050:intron | 40.0% | |
| ACTTGTCGTCCTAAACAAGA+AGG | - | tig0030651:18398-18417 | Msa1444050:intron | 40.0% | |
| CTGAGGGAGTAATTCATAAC+AGG | + | tig0030651:18475-18494 | None:intergenic | 40.0% | |
| ! | GGTCAATTATTTTCGGACTG+AGG | + | tig0030651:18492-18511 | None:intergenic | 40.0% |
| !! | ATTTTGGTCATATGGGGAGA+GGG | - | tig0030651:19035-19054 | Msa1444050:five_prime_UTR | 40.0% |
| TGACATTGCACCAAGAATCT+TGG | - | tig0030651:19193-19212 | Msa1444050:five_prime_UTR | 40.0% | |
| GACATTGCACCAAGAATCTT+GGG | - | tig0030651:19194-19213 | Msa1444050:five_prime_UTR | 40.0% | |
| ! | GGAATTTGTCAGGAGACTTT+TGG | - | tig0030651:19250-19269 | Msa1444050:five_prime_UTR | 40.0% |
| ACACAACACAGAGGTTAGGT+TGG | + | tig0030651:11170-11189 | None:intergenic | 45.0% | |
| TGAGACACAACACAGAGGTT+AGG | + | tig0030651:11174-11193 | None:intergenic | 45.0% | |
| TGAGGTAGCCAAAAAACGTG+AGG | + | tig0030651:11321-11340 | None:intergenic | 45.0% | |
| ! | GAAGCACTTTGAGGAGGTTT+AGG | - | tig0030651:11381-11400 | Msa1444050:intron | 45.0% |
| ACTTTGATCCTAACGCCTCT+TGG | - | tig0030651:11411-11430 | Msa1444050:intron | 45.0% | |
| GAACACAATCAGGTTTCCAG+AGG | - | tig0030651:11973-11992 | Msa1444050:intron | 45.0% | |
| ! | GAGGTCAGGGTGTTAAATCT+TGG | - | tig0030651:12020-12039 | Msa1444050:intron | 45.0% |
| CTTGGAAATATCTCTCCTCG+GGG | - | tig0030651:12038-12057 | Msa1444050:intron | 45.0% | |
| TTGGAAATATCTCTCCTCGG+GGG | - | tig0030651:12039-12058 | Msa1444050:intron | 45.0% | |
| ! | AATGCTGCTTGAATGCACGT+TGG | - | tig0030651:12167-12186 | Msa1444050:intron | 45.0% |
| ATAGCGAGTGTTTGGGAAAG+CGG | + | tig0030651:12203-12222 | None:intergenic | 45.0% | |
| AAAGCCCCTCCGAATAATGT+TGG | - | tig0030651:12570-12589 | Msa1444050:intron | 45.0% | |
| ! | GTGCTTGTGTTGTCTTGTTG+TGG | - | tig0030651:12665-12684 | Msa1444050:intron | 45.0% |
| !! | ACAGCCGATTCTGAAACAAG+GGG | + | tig0030651:12811-12830 | None:intergenic | 45.0% |
| !! | GTACAGCCGATTCTGAAACA+AGG | + | tig0030651:12813-12832 | None:intergenic | 45.0% |
| GTTTCAGAATCGGCTGTACT+TGG | - | tig0030651:12814-12833 | Msa1444050:intron | 45.0% | |
| ! | TGATTCCAGGCTTGTTCACT+GGG | + | tig0030651:12913-12932 | None:intergenic | 45.0% |
| ! | TTGATTCCAGGCTTGTTCAC+TGG | + | tig0030651:12914-12933 | None:intergenic | 45.0% |
| CTGCACAACTTGACTTCCTA+AGG | - | tig0030651:12938-12957 | Msa1444050:intron | 45.0% | |
| GAACAAATCGGAAGCTCAGA+AGG | + | tig0030651:12997-13016 | None:intergenic | 45.0% | |
| GGAAATTTATGCCCCTCATG+TGG | - | tig0030651:13069-13088 | Msa1444050:intron | 45.0% | |
| AGCATTGTCTTCCACATGAG+GGG | + | tig0030651:13083-13102 | None:intergenic | 45.0% | |
| ! | CAAGCATTGTCTTCCACATG+AGG | + | tig0030651:13085-13104 | None:intergenic | 45.0% |
| GACAATGCTTGCATCCTTTC+CGG | - | tig0030651:13094-13113 | Msa1444050:intron | 45.0% | |
| GTTCTTCTCTTTCTTCAGGC+CGG | + | tig0030651:13116-13135 | None:intergenic | 45.0% | |
| GCGTGTTCTTTCAAAGCCTA+CGG | - | tig0030651:13218-13237 | Msa1444050:intron | 45.0% | |
| GGATGTTAATAGCACACTGC+GGG | - | tig0030651:13338-13357 | Msa1444050:intron | 45.0% | |
| AGACTGTTTGGGAGAGCTTA+AGG | + | tig0030651:13932-13951 | None:intergenic | 45.0% | |
| !! | ACATTAGGGCTAGTTTGGAC+AGG | + | tig0030651:13993-14012 | None:intergenic | 45.0% |
| GTAAAATGGGTCAAACAGGG+AGG | + | tig0030651:14178-14197 | None:intergenic | 45.0% | |
| TAGTGCTATACCGCTGCTAT+AGG | + | tig0030651:14490-14509 | None:intergenic | 45.0% | |
| TTGCAGCATGCATATCGTGA+TGG | - | tig0030651:14722-14741 | Msa1444050:intron | 45.0% | |
| ! | AGGTAGCTTTGCGTCATCTT+GGG | - | tig0030651:14756-14775 | Msa1444050:intron | 45.0% |
| GGTTTCTCTCTACCTTATCC+TGG | - | tig0030651:14816-14835 | Msa1444050:intron | 45.0% | |
| ! | ACATGATGCCATCAGGTTGT+CGG | - | tig0030651:14878-14897 | Msa1444050:intron | 45.0% |
| AAGGAAATCCGACAACCTGA+TGG | + | tig0030651:14889-14908 | None:intergenic | 45.0% | |
| AATGCTTCAACATGGTGCCT+GGG | - | tig0030651:15042-15061 | Msa1444050:intron | 45.0% | |
| CATCATTTCTAACGAGACCC+AGG | + | tig0030651:15062-15081 | None:intergenic | 45.0% | |
| TGAGTGCAACAAATGGCTAG+TGG | - | tig0030651:15412-15431 | Msa1444050:intron | 45.0% | |
| GAGTGCAACAAATGGCTAGT+GGG | - | tig0030651:15413-15432 | Msa1444050:intron | 45.0% | |
| AAATGGCTAGTGGGAGAGAA+TGG | - | tig0030651:15422-15441 | Msa1444050:intron | 45.0% | |
| GTGCTATATTGGAGGACTTG+TGG | - | tig0030651:15933-15952 | Msa1444050:intron | 45.0% | |
| GTAACAAGGTCACCACTAAC+AGG | + | tig0030651:16194-16213 | None:intergenic | 45.0% | |
| TATGCCTTAGAATCTGGGTC+TGG | - | tig0030651:16288-16307 | Msa1444050:intron | 45.0% | |
| ! | TCTAGGCAATGTGAAGGTGT+TGG | - | tig0030651:16368-16387 | Msa1444050:intron | 45.0% |
| TGCCGTAATTAGACGGATAG+GGG | - | tig0030651:16414-16433 | Msa1444050:intron | 45.0% | |
| CTCCCCTATCCGTCTAATTA+CGG | + | tig0030651:16419-16438 | None:intergenic | 45.0% | |
| TGGAAATTCCGCCTTTGTTG+CGG | + | tig0030651:16444-16463 | None:intergenic | 45.0% | |
| GGGGTTCGCTAGTATGATAT+TGG | - | tig0030651:16472-16491 | Msa1444050:intron | 45.0% | |
| GTATTCTGCAGAGACAACAC+AGG | + | tig0030651:17152-17171 | None:intergenic | 45.0% | |
| ! | CAACAAAAAAGCTTCGGTGC+TGG | + | tig0030651:17281-17300 | None:intergenic | 45.0% |
| !!! | CAGCACCGAAGCTTTTTTGT+TGG | - | tig0030651:17279-17298 | Msa1444050:CDS | 45.0% |
| TGTATGAACAGCTTCCTCTC+TGG | - | tig0030651:17709-17728 | Msa1444050:intron | 45.0% | |
| GTCACAACACCACATCACAA+TGG | + | tig0030651:17813-17832 | None:intergenic | 45.0% | |
| ! | TGTCTATCATGGGTTTGGTC+GGG | - | tig0030651:18030-18049 | Msa1444050:intron | 45.0% |
| GATTTGATGGAGAAACTCGC+TGG | - | tig0030651:18052-18071 | Msa1444050:intron | 45.0% | |
| TGGCTCCAAGTTCAGTGTTA+AGG | + | tig0030651:18215-18234 | None:intergenic | 45.0% | |
| !! | ATGGAAAGGGCATTGCACAA+AGG | + | tig0030651:18288-18307 | None:intergenic | 45.0% |
| CTCTCCCCATATGACCAAAA+TGG | + | tig0030651:19036-19055 | None:intergenic | 45.0% | |
| !! | CATTTTGGTCATATGGGGAG+AGG | - | tig0030651:19034-19053 | Msa1444050:five_prime_UTR | 45.0% |
| ! | TTTTGGTCATATGGGGAGAG+GGG | - | tig0030651:19036-19055 | Msa1444050:five_prime_UTR | 45.0% |
| AAGGCAACTAAAGAGGCCTC+TGG | + | tig0030651:11992-12011 | None:intergenic | 50.0% | |
| TGCCTTGTGATGTTGAGGTC+AGG | - | tig0030651:12006-12025 | Msa1444050:intron | 50.0% | |
| GCCTTGTGATGTTGAGGTCA+GGG | - | tig0030651:12007-12026 | Msa1444050:intron | 50.0% | |
| ACCCTGACCTCAACATCACA+AGG | + | tig0030651:12011-12030 | None:intergenic | 50.0% | |
| AATATCTCTCCTCGGGGGTA+AGG | - | tig0030651:12044-12063 | Msa1444050:intron | 50.0% | |
| CGGTGAAAAACTTGCGGTGA+TGG | - | tig0030651:12088-12107 | Msa1444050:intron | 50.0% | |
| !! | GAATAAAAAGGGGCACCGGA+TGG | + | tig0030651:12268-12287 | None:intergenic | 50.0% |
| CTCATGGAGCGTGTCTGAAA+GGG | - | tig0030651:12520-12539 | Msa1444050:intron | 50.0% | |
| TCATGGAGCGTGTCTGAAAG+GGG | - | tig0030651:12521-12540 | Msa1444050:intron | 50.0% | |
| ! | TGAAACAAGGGGCTGGTGTT+CGG | + | tig0030651:12800-12819 | None:intergenic | 50.0% |
| ! | CCAGCCCCTTGTTTCAGAAT+CGG | - | tig0030651:12804-12823 | Msa1444050:intron | 50.0% |
| TTCTTCCCAGTGAACAAGCC+TGG | - | tig0030651:12905-12924 | Msa1444050:intron | 50.0% | |
| TCTCTTTCTTCAGGCCGGAA+AGG | + | tig0030651:13111-13130 | None:intergenic | 50.0% | |
| !! | GCTTTGAAAGAACACGCTCG+AGG | + | tig0030651:13215-13234 | None:intergenic | 50.0% |
| GTTCAGAGTGACGCCCTATT+TGG | - | tig0030651:13713-13732 | Msa1444050:intron | 50.0% | |
| ! | AGAAGCAGCTGGTACCGAAA+GGG | + | tig0030651:14112-14131 | None:intergenic | 50.0% |
| ! | TAGAAGCAGCTGGTACCGAA+AGG | + | tig0030651:14113-14132 | None:intergenic | 50.0% |
| GAGGCAATAGCCTATAGCAG+CGG | - | tig0030651:14477-14496 | Msa1444050:intron | 50.0% | |
| ATATCGTGATGGCCGTCTTG+AGG | - | tig0030651:14733-14752 | Msa1444050:intron | 50.0% | |
| GCAAAGCTACCTCCTCAAGA+CGG | + | tig0030651:14748-14767 | None:intergenic | 50.0% | |
| ! | GAGGTAGCTTTGCGTCATCT+TGG | - | tig0030651:14755-14774 | Msa1444050:intron | 50.0% |
| ! | GGTAGCTTTGCGTCATCTTG+GGG | - | tig0030651:14757-14776 | Msa1444050:intron | 50.0% |
| CAGGCACCATGTTGAAGCAT+TGG | + | tig0030651:15043-15062 | None:intergenic | 50.0% | |
| CAATGCTTCAACATGGTGCC+TGG | - | tig0030651:15041-15060 | Msa1444050:intron | 50.0% | |
| AAGCTTGACCATACCGCTCA+AGG | - | tig0030651:15256-15275 | Msa1444050:intron | 50.0% | |
| TAGGCCAGACCCAGATTCTA+AGG | + | tig0030651:16295-16314 | None:intergenic | 50.0% | |
| !! | AGGCAATGTGAAGGTGTTGG+AGG | - | tig0030651:16371-16390 | Msa1444050:intron | 50.0% |
| CGTAATTAGACGGATAGGGG+AGG | - | tig0030651:16417-16436 | Msa1444050:intron | 50.0% | |
| CTAGCGAACCCCCATAATGT+TGG | + | tig0030651:16464-16483 | None:intergenic | 50.0% | |
| ! | GGACATTCGGACTAGGTAGA+AGG | - | tig0030651:16493-16512 | Msa1444050:intron | 50.0% |
| ! | GCTATAGCTTTACAGCGCAG+TGG | + | tig0030651:16690-16709 | None:intergenic | 50.0% |
| !! | GAGGGGGTATTGATAAGACG+CGG | + | tig0030651:17436-17455 | None:intergenic | 50.0% |
| CTGTTCATACAGCAACCCCA+TGG | + | tig0030651:17700-17719 | None:intergenic | 50.0% | |
| ! | TGGGTTTGGTCGGGATTTGA+TGG | - | tig0030651:18039-18058 | Msa1444050:intron | 50.0% |
| TTGATGGAGAAACTCGCTGG+TGG | - | tig0030651:18055-18074 | Msa1444050:intron | 50.0% | |
| TGCGGATGAAAGAGCCCTTA+AGG | - | tig0030651:18185-18204 | Msa1444050:intron | 50.0% | |
| GAGCATCTTAATCGCTAGGG+AGG | + | tig0030651:18733-18752 | None:intergenic | 50.0% | |
| !! | GCACAGTGCAGCTTTTTCTC+TGG | + | tig0030651:18864-18883 | None:intergenic | 50.0% |
| ! | TATGCATAGCCTTACCCCCG+AGG | + | tig0030651:12056-12075 | None:intergenic | 55.0% |
| TATCCTCCCCAGATTCCACC+TGG | - | tig0030651:12230-12249 | Msa1444050:intron | 55.0% | |
| GCTCATGGAGCGTGTCTGAA+AGG | - | tig0030651:12519-12538 | Msa1444050:intron | 55.0% | |
| GTGCTTATGGTAGTCGCTGC+AGG | - | tig0030651:12719-12738 | Msa1444050:intron | 55.0% | |
| !! | CCGATTCTGAAACAAGGGGC+TGG | + | tig0030651:12807-12826 | None:intergenic | 55.0% |
| CTGCTGGAAACTGTCCACGA+GGG | - | tig0030651:13025-13044 | Msa1444050:intron | 55.0% | |
| TGCTGGAAACTGTCCACGAG+GGG | - | tig0030651:13026-13045 | Msa1444050:intron | 55.0% | |
| TGAGGACATTGTTCCCCTCG+TGG | + | tig0030651:13042-13061 | None:intergenic | 55.0% | |
| AACTTACGCTCAGCTGCCGT+AGG | + | tig0030651:13237-13256 | None:intergenic | 55.0% | |
| ACGGCAGCTGAGCGTAAGTT+TGG | - | tig0030651:13237-13256 | Msa1444050:intron | 55.0% | |
| GGCGAAGGAAACTGCCCTTT+CGG | - | tig0030651:14095-14114 | Msa1444050:intron | 55.0% | |
| CGGTACCAGCTGCTTCTACA+AGG | - | tig0030651:14115-14134 | Msa1444050:intron | 55.0% | |
| ATGGGTCAAACAGGGAGGGA+GGG | + | tig0030651:14173-14192 | None:intergenic | 55.0% | |
| AATGGGTCAAACAGGGAGGG+AGG | + | tig0030651:14174-14193 | None:intergenic | 55.0% | |
| ATAGGGGAGGACCGCAACAA+AGG | - | tig0030651:16430-16449 | Msa1444050:intron | 55.0% | |
| TAGCAGATATGGCGGCGCTA+AGG | + | tig0030651:16807-16826 | None:intergenic | 55.0% | |
| GCGCCGCCATATCTGCTATT+TGG | - | tig0030651:16809-16828 | Msa1444050:intron | 55.0% | |
| !! | CGGTGCTGGTGCATCTTGTT+TGG | + | tig0030651:17267-17286 | None:intergenic | 55.0% |
| ATGGAGAAACTCGCTGGTGG+TGG | - | tig0030651:18058-18077 | Msa1444050:intron | 55.0% | |
| GGGCTCTTTCATCCGCACAA+GGG | + | tig0030651:18182-18201 | None:intergenic | 55.0% | |
| AGGGCTCTTTCATCCGCACA+AGG | + | tig0030651:18183-18202 | None:intergenic | 55.0% | |
| CTCCCCAGATTCCACCTGGT+GGG | - | tig0030651:12234-12253 | Msa1444050:intron | 60.0% | |
| CTCCCACCAGGTGGAATCTG+GGG | + | tig0030651:12239-12258 | None:intergenic | 60.0% | |
| GCTCCCACCAGGTGGAATCT+GGG | + | tig0030651:12240-12259 | None:intergenic | 60.0% | |
| GCTGCTGGAAACTGTCCACG+AGG | - | tig0030651:13024-13043 | Msa1444050:intron | 60.0% | |
| TCGTGATGGCCGTCTTGAGG+AGG | - | tig0030651:14736-14755 | Msa1444050:intron | 60.0% | |
| CGTCATCTTGGGGCTGCAGA+TGG | - | tig0030651:14767-14786 | Msa1444050:intron | 60.0% | |
| AAACCATGCGCGCCCTTGTG+CGG | - | tig0030651:18167-18186 | Msa1444050:intron | 60.0% | |
| CCACCAGGTGGAATCTGGGG+AGG | + | tig0030651:12236-12255 | None:intergenic | 65.0% | |
| CCTCCCCAGATTCCACCTGG+TGG | - | tig0030651:12233-12252 | Msa1444050:intron | 65.0% | |
| GGCTCCCACCAGGTGGAATC+TGG | + | tig0030651:12241-12260 | None:intergenic | 65.0% | |
| TGGTGGGAGCCTCGTCCATC+CGG | - | tig0030651:12250-12269 | Msa1444050:intron | 65.0% | |
| !! | AAAGGGGCACCGGATGGACG+AGG | + | tig0030651:12262-12281 | None:intergenic | 65.0% |
| GGGGAGGACCGCAACAAAGG+CGG | - | tig0030651:16433-16452 | Msa1444050:intron | 65.0% | |
| TGGACGAGGCTCCCACCAGG+TGG | + | tig0030651:12248-12267 | None:intergenic | 70.0% | |
| GGATGGACGAGGCTCCCACC+AGG | + | tig0030651:12251-12270 | None:intergenic | 70.0% | |
| ! | CATCCGCACAAGGGCGCGCA+TGG | + | tig0030651:18173-18192 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0030651 | gene | 11136 | 19283 | 11136 | ID=Msa1444050;Name=Msa1444050 |
| tig0030651 | mRNA | 11136 | 19283 | 11136 | ID=Msa1444050-mRNA-1;Parent=Msa1444050;Name=Msa1444050-mRNA-1;_AED=0.19;_eAED=0.19;_QI=332|0.14|0.25|1|0.14|0.25|8|0|303 |
| tig0030651 | exon | 11136 | 11168 | 11136 | ID=Msa1444050-mRNA-1:exon:14313;Parent=Msa1444050-mRNA-1 |
| tig0030651 | exon | 11500 | 11569 | 11500 | ID=Msa1444050-mRNA-1:exon:14312;Parent=Msa1444050-mRNA-1 |
| tig0030651 | exon | 15603 | 15691 | 15603 | ID=Msa1444050-mRNA-1:exon:14311;Parent=Msa1444050-mRNA-1 |
| tig0030651 | exon | 16283 | 16295 | 16283 | ID=Msa1444050-mRNA-1:exon:14310;Parent=Msa1444050-mRNA-1 |
| tig0030651 | exon | 16950 | 17185 | 16950 | ID=Msa1444050-mRNA-1:exon:14309;Parent=Msa1444050-mRNA-1 |
| tig0030651 | exon | 17198 | 17416 | 17198 | ID=Msa1444050-mRNA-1:exon:14308;Parent=Msa1444050-mRNA-1 |
| tig0030651 | exon | 17438 | 17678 | 17438 | ID=Msa1444050-mRNA-1:exon:14307;Parent=Msa1444050-mRNA-1 |
| tig0030651 | exon | 18941 | 19283 | 18941 | ID=Msa1444050-mRNA-1:exon:14306;Parent=Msa1444050-mRNA-1 |
| tig0030651 | five_prime_UTR | 18952 | 19283 | 18952 | ID=Msa1444050-mRNA-1:five_prime_utr;Parent=Msa1444050-mRNA-1 |
| tig0030651 | CDS | 18941 | 18951 | 18941 | ID=Msa1444050-mRNA-1:cds;Parent=Msa1444050-mRNA-1 |
| tig0030651 | CDS | 17438 | 17678 | 17438 | ID=Msa1444050-mRNA-1:cds;Parent=Msa1444050-mRNA-1 |
| tig0030651 | CDS | 17198 | 17416 | 17198 | ID=Msa1444050-mRNA-1:cds;Parent=Msa1444050-mRNA-1 |
| tig0030651 | CDS | 16950 | 17185 | 16950 | ID=Msa1444050-mRNA-1:cds;Parent=Msa1444050-mRNA-1 |
| tig0030651 | CDS | 16283 | 16295 | 16283 | ID=Msa1444050-mRNA-1:cds;Parent=Msa1444050-mRNA-1 |
| tig0030651 | CDS | 15603 | 15691 | 15603 | ID=Msa1444050-mRNA-1:cds;Parent=Msa1444050-mRNA-1 |
| tig0030651 | CDS | 11500 | 11569 | 11500 | ID=Msa1444050-mRNA-1:cds;Parent=Msa1444050-mRNA-1 |
| tig0030651 | CDS | 11136 | 11168 | 11136 | ID=Msa1444050-mRNA-1:cds;Parent=Msa1444050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
