Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1446430 | sp|B9RU15|ATXR5_RICCO | 62.169 | 378 | 137 | 4 | 119 | 495 | 2 | 374 | 3.77e-164 | 472 |
| Msa1446430 | sp|B9RU15|ATXR5_RICCO | 70.149 | 67 | 20 | 0 | 42 | 108 | 43 | 109 | 3.77e-27 | 115 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1446430 | G7JBG7 | 59.292 | 113 | 36 | 2 | 3 | 105 | 8 | 120 | 4.76e-30 | 131 |
| Msa1446430 | G7JBG7 | 94.574 | 387 | 14 | 3 | 114 | 495 | 6 | 390 | 0.0 | 748 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1446430 | TR | PHD |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1446430 | MtrunA17_Chr3g0129881 | 94.574 | 387 | 14 | 3 | 114 | 495 | 6 | 390 | 0.0 | 748 |
| Msa1446430 | MtrunA17_Chr3g0129881 | 59.292 | 113 | 36 | 2 | 3 | 105 | 8 | 120 | 9.16e-34 | 131 |
| Msa1446430 | MtrunA17_Chr1g0146731 | 60.625 | 320 | 122 | 2 | 177 | 495 | 26 | 342 | 9.55e-136 | 395 |
| Msa1446430 | MtrunA17_Chr1g0146731 | 45.312 | 64 | 35 | 0 | 42 | 105 | 10 | 73 | 6.23e-14 | 73.2 |
| Msa1446430 | MtrunA17_Chr1g0146761 | 52.174 | 322 | 117 | 4 | 177 | 495 | 73 | 360 | 1.71e-111 | 334 |
| Msa1446430 | MtrunA17_Chr3g0129871 | 93.421 | 76 | 5 | 0 | 39 | 114 | 1 | 76 | 1.88e-46 | 156 |
| Msa1446430 | MtrunA17_Chr3g0129871 | 75.806 | 62 | 14 | 1 | 163 | 224 | 7 | 67 | 1.84e-28 | 107 |
| Msa1446430 | MtrunA17_Chr1g0146751 | 55.469 | 128 | 57 | 0 | 338 | 465 | 69 | 196 | 1.26e-42 | 150 |
| Msa1446430 | MtrunA17_Chr1g0146741 | 49.367 | 158 | 55 | 2 | 273 | 415 | 30 | 177 | 8.72e-37 | 134 |
| Msa1446430 | MtrunA17_Chr8g0357751 | 55.340 | 103 | 45 | 1 | 338 | 439 | 14 | 116 | 8.82e-32 | 119 |
| Msa1446430 | MtrunA17_Chr5g0397501 | 49.091 | 55 | 28 | 0 | 53 | 107 | 237 | 291 | 8.19e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1446430 | AT5G09790.2 | 65.109 | 321 | 109 | 2 | 175 | 495 | 62 | 379 | 1.21e-154 | 445 |
| Msa1446430 | AT5G09790.2 | 52.577 | 97 | 36 | 3 | 16 | 105 | 18 | 111 | 5.81e-22 | 97.8 |
| Msa1446430 | AT5G09790.1 | 64.798 | 321 | 109 | 2 | 175 | 495 | 62 | 378 | 1.67e-153 | 442 |
| Msa1446430 | AT5G09790.1 | 52.577 | 97 | 36 | 3 | 16 | 105 | 18 | 111 | 5.85e-22 | 97.8 |
| Msa1446430 | AT5G24330.1 | 60.063 | 318 | 124 | 2 | 179 | 495 | 34 | 349 | 2.30e-132 | 387 |
| Msa1446430 | AT5G24330.1 | 69.565 | 46 | 14 | 0 | 60 | 105 | 34 | 79 | 8.29e-17 | 82.4 |
| Msa1446430 | AT1G63490.2 | 45.161 | 62 | 34 | 0 | 44 | 105 | 225 | 286 | 9.20e-11 | 65.1 |
| Msa1446430 | AT1G63490.4 | 45.161 | 62 | 34 | 0 | 44 | 105 | 225 | 286 | 9.36e-11 | 65.1 |
Find 151 sgRNAs with CRISPR-Local
Find 503 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTACTATAGTTTCAATCTA+AGG | 0.205084 | tig0031362:+24311 | Msa1446430:three_prime_UTR |
| CATGCCACCGTTCTCTAAAA+TGG | 0.242537 | tig0031362:-23000 | None:intergenic |
| CGTAGGGATTCTCTTGATTC+CGG | 0.245953 | tig0031362:+20878 | Msa1446430:CDS |
| CTTAATAATCCTATAGAATT+AGG | 0.249310 | tig0031362:+24029 | Msa1446430:three_prime_UTR |
| TGGTGAAAGCCGGGTCTTAT+TGG | 0.291905 | tig0031362:+23898 | Msa1446430:CDS |
| CTAGAGTTCCTATTGGTTCA+TGG | 0.294500 | tig0031362:+15748 | Msa1446430:CDS |
| AAAATTGGTCCTAATTCTAT+AGG | 0.300279 | tig0031362:-24038 | None:intergenic |
| AGAAAATTCTCCATTTCTTC+GGG | 0.303724 | tig0031362:+20852 | Msa1446430:CDS |
| AGTCTGTTGGCTTCTTCTTT+CGG | 0.305637 | tig0031362:-15533 | None:intergenic |
| AATTACTAAGCCACATAATT+AGG | 0.308654 | tig0031362:-24188 | None:intergenic |
| AGGCCAATTCCCTCCCTTAT+TGG | 0.310631 | tig0031362:+23213 | Msa1446430:CDS |
| AAGAAAATTCTCCATTTCTT+CGG | 0.317251 | tig0031362:+20851 | Msa1446430:CDS |
| AGGCTTTATTATGACTATAA+TGG | 0.341103 | tig0031362:+23950 | Msa1446430:CDS |
| ATTTGCTTCAGCCTCCTATC+AGG | 0.349536 | tig0031362:-22882 | None:intergenic |
| GTAGGGATTCTCTTGATTCC+GGG | 0.353728 | tig0031362:+20879 | Msa1446430:CDS |
| GAAGTGTCTGAGACCGGTTC+TGG | 0.362102 | tig0031362:+15725 | Msa1446430:CDS |
| AATAAGCTGACGTACTTTCC+AGG | 0.362677 | tig0031362:+22951 | Msa1446430:CDS |
| CCCTACGAAGCCCGAAGAAA+TGG | 0.364855 | tig0031362:-20862 | None:intergenic |
| GAACAATCGTGCTTCTTCTC+AGG | 0.365882 | tig0031362:+20901 | Msa1446430:CDS |
| TGAATCATAAACGACCAATA+AGG | 0.370728 | tig0031362:-23227 | None:intergenic |
| ATAAATGTCATATCTTTGAT+TGG | 0.375561 | tig0031362:-23373 | None:intergenic |
| ACATAATTAGGCCAGCTATA+TGG | 0.389430 | tig0031362:-24176 | None:intergenic |
| TTCCTCTCAGGCTCTTACTA+AGG | 0.390777 | tig0031362:+23147 | Msa1446430:intron |
| CCCCAAGTGTTGTTCTGAGC+TGG | 0.393884 | tig0031362:+15776 | Msa1446430:CDS |
| TGCTACTGCTTTAACAGCAT+TGG | 0.399408 | tig0031362:+22914 | Msa1446430:CDS |
| TTCTGTACCACCAGAGGTCT+TGG | 0.407511 | tig0031362:-22819 | None:intergenic |
| GGGCAAATCCATGAACCAAT+AGG | 0.417784 | tig0031362:-15756 | None:intergenic |
| AGAAGAAGCACGATTGTTCC+CGG | 0.418393 | tig0031362:-20897 | None:intergenic |
| ATCGGAACTCGAACAACAAT+TGG | 0.420274 | tig0031362:-20655 | None:intergenic |
| GCAGATCTAGGAGCCATTCC+TGG | 0.421695 | tig0031362:-22969 | None:intergenic |
| GGCTTCTTCTTTCGGTGGCA+CGG | 0.431024 | tig0031362:-15525 | None:intergenic |
| TTACTATAGTTTCAATCTAA+GGG | 0.439191 | tig0031362:+24312 | Msa1446430:three_prime_UTR |
| ATGTGGGTCCGGTGAACAAC+CGG | 0.439307 | tig0031362:+20576 | Msa1446430:CDS |
| GGATCTTCTGTAGGAACAAA+TGG | 0.446011 | tig0031362:-22861 | None:intergenic |
| TAAATGTCATATCTTTGATT+GGG | 0.451435 | tig0031362:-23372 | None:intergenic |
| ATGTGTGCGGCGGGTGAAGC+TGG | 0.451472 | tig0031362:-15499 | None:intergenic |
| GATTAAGCTTGATAGCTTGA+TGG | 0.452643 | tig0031362:-20380 | None:intergenic |
| GAATCATAAACGACCAATAA+GGG | 0.455816 | tig0031362:-23226 | None:intergenic |
| CTCTGGTGGTACAGAAGAAA+AGG | 0.456244 | tig0031362:+22826 | Msa1446430:CDS |
| CAGGACGATGACTAATATAA+TGG | 0.457022 | tig0031362:+15578 | Msa1446430:intron |
| ACCTCCTGTGTGAGCAATGT+GGG | 0.458530 | tig0031362:+20560 | Msa1446430:CDS |
| GCTGAGGAGGAGGAGGATTA+CGG | 0.459874 | tig0031362:+20535 | Msa1446430:CDS |
| CTCCAGCTCAGAACAACACT+TGG | 0.460665 | tig0031362:-15778 | None:intergenic |
| TATGTGGCTTAGTAATTATG+TGG | 0.461586 | tig0031362:+24194 | Msa1446430:three_prime_UTR |
| GGCTGAGTACACGGTGGCTG+AGG | 0.462695 | tig0031362:+20519 | Msa1446430:CDS |
| GCACGGTGCATGTGTGCGGC+GGG | 0.463261 | tig0031362:-15508 | None:intergenic |
| CGACCAATAAGGGAGGGAAT+TGG | 0.463530 | tig0031362:-23216 | None:intergenic |
| CTCCTCATCCTCCACCTTCG+AGG | 0.464032 | tig0031362:+20450 | Msa1446430:CDS |
| GTTCTGGCTAGAGTTCCTAT+TGG | 0.469825 | tig0031362:+15741 | Msa1446430:CDS |
| AATTTATATGCAGGGAAGGC+AGG | 0.471087 | tig0031362:+23837 | Msa1446430:intron |
| CCATTTCTTCGGGCTTCGTA+GGG | 0.472840 | tig0031362:+20862 | Msa1446430:CDS |
| TCACACAAAAGCAGCTCCTC+CGG | 0.474129 | tig0031362:-20595 | None:intergenic |
| GTGAAGCTGGTTAGCTTACG+AGG | 0.474210 | tig0031362:-15486 | None:intergenic |
| CTCCTCGAAGGTGGAGGATG+AGG | 0.474943 | tig0031362:-20452 | None:intergenic |
| ATGTGTGAGCGATGTGGATC+TGG | 0.479905 | tig0031362:+15648 | Msa1446430:CDS |
| ATCCTCCACCTTCGAGGAGG+AGG | 0.480157 | tig0031362:+20456 | Msa1446430:CDS |
| TGATAGGAGGCTGAAGCAAA+TGG | 0.484670 | tig0031362:+22884 | Msa1446430:CDS |
| CTCCACCTTCGAGGAGGAGG+AGG | 0.488245 | tig0031362:+20459 | Msa1446430:CDS |
| TCCATTTCTTCGGGCTTCGT+AGG | 0.489521 | tig0031362:+20861 | Msa1446430:CDS |
| GGGCAAATCCACGGACCAAT+CGG | 0.489548 | tig0031362:-20673 | None:intergenic |
| GTCGTTTATGATTCATGCCA+AGG | 0.490606 | tig0031362:+23235 | Msa1446430:CDS |
| TTCCTACAGAAGATCCTGAT+AGG | 0.493201 | tig0031362:+22868 | Msa1446430:CDS |
| ATAGGAACTCTAGCCAGAAC+CGG | 0.497595 | tig0031362:-15738 | None:intergenic |
| TGTGTGAGATATGATGTTAA+TGG | 0.499519 | tig0031362:+23878 | Msa1446430:CDS |
| ATGGATCGATTAGCAGATCT+AGG | 0.502517 | tig0031362:-22981 | None:intergenic |
| TCACACAACAAAAGCTCCTC+AGG | 0.503103 | tig0031362:-15678 | None:intergenic |
| CTGTGTGAGCAATGTGGGTC+CGG | 0.504059 | tig0031362:+20565 | Msa1446430:CDS |
| CTCAGACAAAATGATGAGTT+GGG | 0.506277 | tig0031362:-23988 | None:intergenic |
| CACGGTGGCTGAGGAGGAGG+AGG | 0.506420 | tig0031362:+20528 | Msa1446430:CDS |
| CAGCTCCTCCGGTTGTTCAC+CGG | 0.511216 | tig0031362:-20584 | None:intergenic |
| GCTCAGACAAAATGATGAGT+TGG | 0.512353 | tig0031362:-23989 | None:intergenic |
| TCGGAGACGTCCAAGACCTC+TGG | 0.514165 | tig0031362:+22809 | Msa1446430:CDS |
| TGAGTACACGGTGGCTGAGG+AGG | 0.515374 | tig0031362:+20522 | Msa1446430:CDS |
| CTCCTCCTCCTCGAAGGTGG+AGG | 0.519312 | tig0031362:-20458 | None:intergenic |
| CTGTTGGCTTCTTCTTTCGG+TGG | 0.523013 | tig0031362:-15530 | None:intergenic |
| TCATATGAAGTGTCTGAGAC+CGG | 0.525057 | tig0031362:+15719 | Msa1446430:CDS |
| ATGATGTTAATGGTGAAAGC+CGG | 0.525411 | tig0031362:+23888 | Msa1446430:CDS |
| GGCACGGTGCATGTGTGCGG+CGG | 0.525820 | tig0031362:-15509 | None:intergenic |
| AGAGATGAATAGAGAACCCT+AGG | 0.528708 | tig0031362:+24220 | Msa1446430:three_prime_UTR |
| ATTTCTTAAAGTGTTACTGT+GGG | 0.531797 | tig0031362:+24134 | Msa1446430:three_prime_UTR |
| TTTAGAGAACGGTGGCATGC+AGG | 0.534531 | tig0031362:+23004 | Msa1446430:CDS |
| CCCGAGGTGTTCTGATGTCA+AGG | 0.535857 | tig0031362:+20693 | Msa1446430:CDS |
| GCCAACAGACTCGTCATCGC+GGG | 0.543998 | tig0031362:+15545 | Msa1446430:CDS |
| TCCAGCTCAGAACAACACTT+GGG | 0.544872 | tig0031362:-15777 | None:intergenic |
| AACAATCGTGCTTCTTCTCA+GGG | 0.545517 | tig0031362:+20902 | Msa1446430:CDS |
| GTACACGGTGGCTGAGGAGG+AGG | 0.545768 | tig0031362:+20525 | Msa1446430:CDS |
| TGATGTTAATGGTGAAAGCC+GGG | 0.546415 | tig0031362:+23889 | Msa1446430:CDS |
| TTCGAGTTCCGATTGGTCCG+TGG | 0.546720 | tig0031362:+20665 | Msa1446430:CDS |
| ACATTTATTGCTGAATACAC+TGG | 0.549884 | tig0031362:+23388 | Msa1446430:CDS |
| AATTTCTTAAAGTGTTACTG+TGG | 0.552157 | tig0031362:+24133 | Msa1446430:three_prime_UTR |
| ATATAGCTGGCCTAATTATG+TGG | 0.555465 | tig0031362:+24178 | Msa1446430:three_prime_UTR |
| ATTGTTGTTCGAGTTCCGAT+TGG | 0.560719 | tig0031362:+20658 | Msa1446430:CDS |
| ATATGCAGTGGTTGAGAAGG+AGG | 0.563550 | tig0031362:+15611 | Msa1446430:CDS |
| CCCCTCCTCCTCCTCGAAGG+TGG | 0.568245 | tig0031362:-20461 | None:intergenic |
| ATGCTGTTAAAGCAGTAGCA+AGG | 0.571401 | tig0031362:-22911 | None:intergenic |
| TAAATATGCAGTGGTTGAGA+AGG | 0.574113 | tig0031362:+15608 | Msa1446430:CDS |
| TGCTGTTAAAGCAGTAGCAA+GGG | 0.574924 | tig0031362:-22910 | None:intergenic |
| ATCATGAAAATTCTTTCCCG+AGG | 0.577272 | tig0031362:-24066 | None:intergenic |
| CCTTGACATCAGAACACCTC+GGG | 0.578324 | tig0031362:-20693 | None:intergenic |
| CCACCTTCGAGGAGGAGGAG+GGG | 0.583605 | tig0031362:+20461 | Msa1446430:CDS |
| TCCACCTTCGAGGAGGAGGA+GGG | 0.584045 | tig0031362:+20460 | Msa1446430:CDS |
| CTTTAGATGCTATGAAGCGT+CGG | 0.589068 | tig0031362:+22790 | Msa1446430:intron |
| ATTCCCCTCCTCCTCCTCGA+AGG | 0.589669 | tig0031362:-20464 | None:intergenic |
| CTTGATAGCTTGATGGAAGA+CGG | 0.590190 | tig0031362:-20373 | None:intergenic |
| GAACACCTCGGGCAAATCCA+CGG | 0.590349 | tig0031362:-20682 | None:intergenic |
| TCGTTTATGATTCATGCCAA+GGG | 0.591563 | tig0031362:+23236 | Msa1446430:CDS |
| GCTGACGTACTTTCCAGGAA+TGG | 0.592256 | tig0031362:+22956 | Msa1446430:CDS |
| CTCCTATCAGGATCTTCTGT+AGG | 0.592606 | tig0031362:-22870 | None:intergenic |
| CTCGAAGGTGGAGGATGAGG+AGG | 0.595688 | tig0031362:-20449 | None:intergenic |
| GAAGACGGCGATGGAGACGC+CGG | 0.596034 | tig0031362:-20358 | None:intergenic |
| ATATAAGAGGGCTGAGTACA+CGG | 0.598652 | tig0031362:+20510 | Msa1446430:intron |
| AACATTGCTCGCTTCATCAG+TGG | 0.600548 | tig0031362:+23523 | Msa1446430:CDS |
| AGCTTGATGGAAGACGGCGA+TGG | 0.603823 | tig0031362:-20367 | None:intergenic |
| TCATGAAAATTCTTTCCCGA+GGG | 0.609236 | tig0031362:-24065 | None:intergenic |
| ACCCGCGATGACGAGTCTGT+TGG | 0.610544 | tig0031362:-15546 | None:intergenic |
| TTGTGTGACAAATGTGACAA+TGG | 0.614662 | tig0031362:+20610 | Msa1446430:CDS |
| TGTGAGGTGCATGGGTGCGG+CGG | 0.615402 | tig0031362:-20402 | None:intergenic |
| GCTACTCGAGATATTTCCAA+GGG | 0.615468 | tig0031362:+23923 | Msa1446430:CDS |
| TGCTACTCGAGATATTTCCA+AGG | 0.618331 | tig0031362:+23922 | Msa1446430:CDS |
| TTGTGTGACAAATGCGACAA+AGG | 0.628248 | tig0031362:+15693 | Msa1446430:CDS |
| CTCATCCTCCACCTTCGAGG+AGG | 0.628581 | tig0031362:+20453 | Msa1446430:CDS |
| CGGACCCACATTGCTCACAC+AGG | 0.629732 | tig0031362:-20564 | None:intergenic |
| CGATGACTAATATAATGGCG+AGG | 0.630890 | tig0031362:+15583 | Msa1446430:CDS |
| TTGGTCCGTGGATTTGCCCG+AGG | 0.633180 | tig0031362:+20677 | Msa1446430:CDS |
| CATAAACGACCAATAAGGGA+GGG | 0.633637 | tig0031362:-23222 | None:intergenic |
| CTACAGAAGATCCTGATAGG+AGG | 0.635132 | tig0031362:+22871 | Msa1446430:CDS |
| GATGACTAATATAATGGCGA+GGG | 0.645664 | tig0031362:+15584 | Msa1446430:CDS |
| TCATAAACGACCAATAAGGG+AGG | 0.648173 | tig0031362:-23223 | None:intergenic |
| GGTGGCACGGTGCATGTGTG+CGG | 0.648842 | tig0031362:-15512 | None:intergenic |
| AGCCAACAGACTCGTCATCG+CGG | 0.654231 | tig0031362:+15544 | Msa1446430:CDS |
| ACCCACATTGCTCACACAGG+AGG | 0.655882 | tig0031362:-20561 | None:intergenic |
| ACCTTGACATCAGAACACCT+CGG | 0.656521 | tig0031362:-20694 | None:intergenic |
| TGAAGCTGGTTAGCTTACGA+GGG | 0.657884 | tig0031362:-15485 | None:intergenic |
| GAGTAGCAACCAATAAGACC+CGG | 0.658883 | tig0031362:-23907 | None:intergenic |
| GGCGAGGGCTAAATATGCAG+TGG | 0.659115 | tig0031362:+15599 | Msa1446430:CDS |
| GACCTCCTGTGTGAGCAATG+TGG | 0.660393 | tig0031362:+20559 | Msa1446430:CDS |
| CCAGCTCAGAACAACACTTG+GGG | 0.668343 | tig0031362:-15776 | None:intergenic |
| TGGTACAGAAGAAAAGGAGA+AGG | 0.674031 | tig0031362:+22832 | Msa1446430:CDS |
| GAGACGTCCAAGACCTCTGG+TGG | 0.674893 | tig0031362:+22812 | Msa1446430:CDS |
| TGGGTCCGGTGAACAACCGG+AGG | 0.676363 | tig0031362:+20579 | Msa1446430:CDS |
| GCAATGTAGCTATACTGTGG+AGG | 0.683236 | tig0031362:+23342 | Msa1446430:intron |
| GACTGCATGTGTGAGCGATG+TGG | 0.685024 | tig0031362:+15642 | Msa1446430:CDS |
| GAAGCTGGTTAGCTTACGAG+GGG | 0.692874 | tig0031362:-15484 | None:intergenic |
| TGGATCTGGTGAACAACCTG+AGG | 0.697540 | tig0031362:+15662 | Msa1446430:CDS |
| TACTCGAGATATTTCCAAGG+GGG | 0.699750 | tig0031362:+23925 | Msa1446430:CDS |
| GTTATCTGTGCTGATAAACG+TGG | 0.699829 | tig0031362:+23499 | Msa1446430:CDS |
| TGCATAGCTATGACTAAACG+AGG | 0.704634 | tig0031362:+23193 | Msa1446430:CDS |
| CTACTCGAGATATTTCCAAG+GGG | 0.743213 | tig0031362:+23924 | Msa1446430:CDS |
| TATGCAATGTAGCTATACTG+TGG | 0.744881 | tig0031362:+23339 | Msa1446430:intron |
| AAGCTGGTTAGCTTACGAGG+GGG | 0.759841 | tig0031362:-15483 | None:intergenic |
| TAAGAGGGCTGAGTACACGG+TGG | 0.812154 | tig0031362:+20513 | Msa1446430:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTAAAAAAAATTTT+TGG | - | tig0031362:19708-19727 | None:intergenic | 0.0% |
| !!! | TAAAAAAAATATTTTTTTAT+TGG | + | tig0031362:20961-20980 | Msa1446430:intron | 0.0% |
| !! | GTAATACATATATTATTTAA+TGG | + | tig0031362:16756-16775 | Msa1446430:intron | 10.0% |
| !! | AATTATTTACATAAAATACA+TGG | - | tig0031362:17193-17212 | None:intergenic | 10.0% |
| !!! | ATTTTATGTAAATAATTGTT+CGG | + | tig0031362:17196-17215 | Msa1446430:intron | 10.0% |
| !!! | TATTTTCTTCTATATATTAA+AGG | + | tig0031362:18799-18818 | Msa1446430:intron | 10.0% |
| !! | AACTTATATGATATTATAAA+TGG | + | tig0031362:19005-19024 | Msa1446430:intron | 10.0% |
| !! | AAACAATTTATAATTTATGA+CGG | - | tig0031362:19217-19236 | None:intergenic | 10.0% |
| !!! | TTTTTGAATAAGATTTTTTT+TGG | - | tig0031362:19585-19604 | None:intergenic | 10.0% |
| !!! | TTGTTTTTTTATTTATGTTT+TGG | - | tig0031362:20146-20165 | None:intergenic | 10.0% |
| !!! | ATCTTTAGAAAATATTTAAT+TGG | + | tig0031362:22556-22575 | Msa1446430:intron | 10.0% |
| !! | TATTAGCTATCAATATAATA+TGG | + | tig0031362:15878-15897 | Msa1446430:intron | 15.0% |
| !! | ATTGAAATAGTTATTTGAAA+AGG | + | tig0031362:16372-16391 | Msa1446430:intron | 15.0% |
| !! | TTGAAATAGTTATTTGAAAA+GGG | + | tig0031362:16373-16392 | Msa1446430:intron | 15.0% |
| !!! | ATCAATTTGTTTTGAAATTA+TGG | + | tig0031362:16692-16711 | Msa1446430:intron | 15.0% |
| !! | GTGTTTATATAATATGAAAT+CGG | - | tig0031362:18194-18213 | None:intergenic | 15.0% |
| !! | TATAGACAAGAAATAAAAAT+TGG | - | tig0031362:18243-18262 | None:intergenic | 15.0% |
| !! | GTTTATTAGAAATTGAAAAA+CGG | + | tig0031362:18464-18483 | Msa1446430:intron | 15.0% |
| !! | TTAATAATCATCTAAAAAAG+AGG | + | tig0031362:18621-18640 | Msa1446430:intron | 15.0% |
| !!! | CATTTATAATGTTTTCAAAT+TGG | + | tig0031362:18769-18788 | Msa1446430:intron | 15.0% |
| !! | TAATATATAGAAGAAAATAG+TGG | - | tig0031362:18798-18817 | None:intergenic | 15.0% |
| !!! | AACATAATATATTTTTTGAG+AGG | + | tig0031362:18878-18897 | Msa1446430:intron | 15.0% |
| !!! | TTTTTAAAAGTGAATAAATC+AGG | - | tig0031362:19105-19124 | None:intergenic | 15.0% |
| !!! | TGATTTATTCACTTTTAAAA+AGG | + | tig0031362:19104-19123 | Msa1446430:intron | 15.0% |
| !! | TTATAAAAAGTTACTACTTT+AGG | - | tig0031362:19811-19830 | None:intergenic | 15.0% |
| !! | TAATTCTTGTAATGATTATT+TGG | + | tig0031362:21254-21273 | Msa1446430:intron | 15.0% |
| !! | ATATATACATGATATCTAAT+TGG | + | tig0031362:22734-22753 | Msa1446430:intron | 15.0% |
| !! | CATGTTAATCTTAAATTAAA+GGG | + | tig0031362:23585-23604 | Msa1446430:intron | 15.0% |
| !!! | TTTAAAGAACTAAAATTTTG+AGG | + | tig0031362:23730-23749 | Msa1446430:intron | 15.0% |
| !! | AAAAAAAAACTAAATGAAGA+AGG | - | tig0031362:24250-24269 | None:intergenic | 15.0% |
| !! | AGTAAGTGATCAATATAATA+TGG | + | tig0031362:15810-15829 | Msa1446430:intron | 20.0% |
| !! | TATTTATGCATAAATGTCAA+TGG | + | tig0031362:16103-16122 | Msa1446430:intron | 20.0% |
| !! | ATTTATGCATAAATGTCAAT+GGG | + | tig0031362:16104-16123 | Msa1446430:intron | 20.0% |
| !!! | CTTAATAATTGATTCACTAA+CGG | - | tig0031362:16227-16246 | None:intergenic | 20.0% |
| !! | AACATTAAAAATTGAGAAAC+AGG | + | tig0031362:16318-16337 | Msa1446430:intron | 20.0% |
| !! | TGTTTATCTTGAAAAACATA+TGG | + | tig0031362:16547-16566 | Msa1446430:intron | 20.0% |
| !! | AATTTAATGTGATTCATTGT+CGG | + | tig0031362:16718-16737 | Msa1446430:intron | 20.0% |
| !! | GCAATACATATATTATTCAT+TGG | + | tig0031362:17132-17151 | Msa1446430:intron | 20.0% |
| !!! | ATTTATTGTTCTTTGGAAAT+TGG | + | tig0031362:17428-17447 | Msa1446430:intron | 20.0% |
| !!! | TTAAGATAGTTTTTTGAAAG+TGG | + | tig0031362:17758-17777 | Msa1446430:intron | 20.0% |
| !!! | TATCAAGTTGTTTGTAAATT+AGG | + | tig0031362:18046-18065 | Msa1446430:intron | 20.0% |
| !! | CATTGAATAATTAACGTATA+TGG | - | tig0031362:18303-18322 | None:intergenic | 20.0% |
| !! | GTATTAAAAAAAAGCTTGAA+TGG | - | tig0031362:18437-18456 | None:intergenic | 20.0% |
| !!! | TATTAAAGGAAATACCTTTT+AGG | + | tig0031362:18813-18832 | Msa1446430:intron | 20.0% |
| !!! | TTTAGAATTTTGATCCTAAA+AGG | - | tig0031362:18830-18849 | None:intergenic | 20.0% |
| !! | TTTGAATCACATTAATTGTT+TGG | - | tig0031362:19647-19666 | None:intergenic | 20.0% |
| !! | TAACATTTCCCAAAAAAAAA+TGG | - | tig0031362:19759-19778 | None:intergenic | 20.0% |
| !!! | AACAAAACCCTTTTTTTTTT+TGG | + | tig0031362:19932-19951 | Msa1446430:intron | 20.0% |
| !! | GAATGAACCAAAAAAAAAAA+GGG | - | tig0031362:19942-19961 | None:intergenic | 20.0% |
| !! | TGAATGAACCAAAAAAAAAA+AGG | - | tig0031362:19943-19962 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTGGTTCATTCA+TGG | + | tig0031362:19943-19962 | Msa1446430:intron | 20.0% |
| !! | GTAAACAAAAAAAACATCAA+AGG | + | tig0031362:20117-20136 | Msa1446430:intron | 20.0% |
| !!! | AATTTGTGTTAACTCTAAAA+TGG | - | tig0031362:20223-20242 | None:intergenic | 20.0% |
| !!! | GCTTGTTAATATATATAAGA+GGG | + | tig0031362:20498-20517 | Msa1446430:intron | 20.0% |
| !!! | TCGTGGATTATAAATATTTT+TGG | + | tig0031362:21166-21185 | Msa1446430:intron | 20.0% |
| !!! | TTTAAATTTTTGTGTGAACA+TGG | + | tig0031362:21283-21302 | Msa1446430:intron | 20.0% |
| !!! | TTAAATTTTTGTGTGAACAT+GGG | + | tig0031362:21284-21303 | Msa1446430:intron | 20.0% |
| !!! | TTGATTTGTTGTAGTTATTT+TGG | + | tig0031362:21421-21440 | Msa1446430:intron | 20.0% |
| !! | ATCTAGTTAGATTAAGAATA+TGG | - | tig0031362:21879-21898 | None:intergenic | 20.0% |
| !! | AGTATAATTTGACATTAATG+TGG | + | tig0031362:22238-22257 | Msa1446430:intron | 20.0% |
| !!! | CAAAAGAACTAGAAATTTTT+TGG | + | tig0031362:22351-22370 | Msa1446430:intron | 20.0% |
| !! | AAAGTTGTAGGAAAAAAAAA+AGG | - | tig0031362:22612-22631 | None:intergenic | 20.0% |
| !! | TCAAAACATAAAAAAGTTGT+AGG | - | tig0031362:22624-22643 | None:intergenic | 20.0% |
| !!! | TATGTTATCTTAACTTTTCT+TGG | + | tig0031362:23305-23324 | Msa1446430:intron | 20.0% |
| !! | TAAATGTCATATCTTTGATT+GGG | - | tig0031362:23375-23394 | None:intergenic | 20.0% |
| !! | ATAAATGTCATATCTTTGAT+TGG | - | tig0031362:23376-23395 | None:intergenic | 20.0% |
| !! | GCATGTTAATCTTAAATTAA+AGG | + | tig0031362:23584-23603 | Msa1446430:intron | 20.0% |
| !! | AATAAGAATGTCAAAATGAA+TGG | - | tig0031362:23656-23675 | None:intergenic | 20.0% |
| !! | AAGCTAAACAACATATAAAA+TGG | - | tig0031362:23700-23719 | None:intergenic | 20.0% |
| !!! | TTTTATATGTTGTTTAGCTT+TGG | + | tig0031362:23700-23719 | Msa1446430:intron | 20.0% |
| !! | CTTAATAATCCTATAGAATT+AGG | + | tig0031362:24029-24048 | Msa1446430:three_prime_UTR | 20.0% |
| !! | TTTACTATAGTTTCAATCTA+AGG | + | tig0031362:24311-24330 | Msa1446430:three_prime_UTR | 20.0% |
| !! | TTACTATAGTTTCAATCTAA+GGG | + | tig0031362:24312-24331 | Msa1446430:three_prime_UTR | 20.0% |
| ! | ATGGTGTGAAAATAAAAAGA+TGG | + | tig0031362:15829-15848 | Msa1446430:intron | 25.0% |
| !!! | AGCTAATATTTTAGCAAAGA+CGG | - | tig0031362:15866-15885 | None:intergenic | 25.0% |
| ! | ATGGTGTGTAAATAAAAAGA+CGG | + | tig0031362:15897-15916 | Msa1446430:intron | 25.0% |
| !!! | AATTACTTTTTCAGCAAAGA+CGG | - | tig0031362:15934-15953 | None:intergenic | 25.0% |
| ! | TACTTAAACATACATGCATA+GGG | - | tig0031362:16043-16062 | None:intergenic | 25.0% |
| !!! | TTTTATTTTCATTATTGGCC+TGG | - | tig0031362:16077-16096 | None:intergenic | 25.0% |
| !! | TCAAGTTTATTGATTGACAT+TGG | + | tig0031362:16134-16153 | Msa1446430:intron | 25.0% |
| ! | AACTATCTGTATAACATACA+TGG | - | tig0031362:16267-16286 | None:intergenic | 25.0% |
| ! | AAATAGTTATTTGAAAAGGG+TGG | + | tig0031362:16376-16395 | Msa1446430:intron | 25.0% |
| ! | TTATCTTGAAAAACATATGG+TGG | + | tig0031362:16550-16569 | Msa1446430:intron | 25.0% |
| ! | TTCATTGGAAATTGAGAAAA+TGG | + | tig0031362:16638-16657 | Msa1446430:intron | 25.0% |
| ! | AACTATATCATTAGCATATG+TGG | - | tig0031362:17049-17068 | None:intergenic | 25.0% |
| ! | ATGCTAATGATATAGTTGTT+AGG | + | tig0031362:17052-17071 | Msa1446430:intron | 25.0% |
| ! | AATGATATAGTTGTTAGGAA+AGG | + | tig0031362:17057-17076 | Msa1446430:intron | 25.0% |
| ! | ATGATATAGTTGTTAGGAAA+GGG | + | tig0031362:17058-17077 | Msa1446430:intron | 25.0% |
| ! | ATGTAAATAATTGTTCGGAA+AGG | + | tig0031362:17201-17220 | Msa1446430:intron | 25.0% |
| ! | TGTAAATAATTGTTCGGAAA+GGG | + | tig0031362:17202-17221 | Msa1446430:intron | 25.0% |
| ! | GCAATACATTTATTGTTCTT+TGG | + | tig0031362:17421-17440 | Msa1446430:intron | 25.0% |
| ! | CATTAAATCCATAAATTGTG+TGG | - | tig0031362:17519-17538 | None:intergenic | 25.0% |
| ! | ACATGACAAGACAAATAATT+AGG | - | tig0031362:17614-17633 | None:intergenic | 25.0% |
| ! | ACTAAAAATTGAGAAACAAG+CGG | + | tig0031362:17706-17725 | Msa1446430:intron | 25.0% |
| ! | AACTATCTTAATAGCATACA+TGG | - | tig0031362:17749-17768 | None:intergenic | 25.0% |
| ! | GCAATACATATATTATTCGT+TGG | + | tig0031362:17833-17852 | Msa1446430:intron | 25.0% |
| ! | ATTCTATTGAGACAATTGTT+CGG | + | tig0031362:17897-17916 | Msa1446430:intron | 25.0% |
| !!! | CTTGTCTATATCTTTTTTGA+AGG | + | tig0031362:18253-18272 | Msa1446430:intron | 25.0% |
| !!! | ACTTAAATGTAACTTGTTGT+TGG | + | tig0031362:18411-18430 | Msa1446430:intron | 25.0% |
| !!! | ACCTCTCTGTTTTATTTTTT+GGG | - | tig0031362:18494-18513 | None:intergenic | 25.0% |
| ! | TCTACTATATTGTCAAACAA+AGG | + | tig0031362:18854-18873 | Msa1446430:intron | 25.0% |
| !! | CAACAATTGAATTTTATGCA+CGG | - | tig0031362:18943-18962 | None:intergenic | 25.0% |
| ! | ATTCAATTGTTGATATGACA+CGG | + | tig0031362:18951-18970 | Msa1446430:intron | 25.0% |
| !! | CTTGTGGATTTAACTTAATT+AGG | + | tig0031362:19038-19057 | Msa1446430:intron | 25.0% |
| ! | TAAAAGTCTGTGTAAAAAAC+CGG | + | tig0031362:20002-20021 | Msa1446430:intron | 25.0% |
| !! | CGCTTGTTAATATATATAAG+AGG | + | tig0031362:20497-20516 | Msa1446430:intron | 25.0% |
| ! | TGTGATTGTGATTATTAATG+TGG | + | tig0031362:20784-20803 | Msa1446430:intron | 25.0% |
| ! | AAGAAAATTCTCCATTTCTT+CGG | + | tig0031362:20851-20870 | Msa1446430:CDS | 25.0% |
| ! | CAATGTTTGGATATTTGATT+TGG | + | tig0031362:21034-21053 | Msa1446430:intron | 25.0% |
| !! | TAAATTTTTGTGTGAACATG+GGG | + | tig0031362:21285-21304 | Msa1446430:intron | 25.0% |
| !! | TGTTTCTTTAGAAATTGTGT+TGG | + | tig0031362:21351-21370 | Msa1446430:intron | 25.0% |
| ! | CAAATCAAGCTTAAAATTTG+TGG | - | tig0031362:21409-21428 | None:intergenic | 25.0% |
| ! | AACATTACTATCGCAAAAAT+AGG | - | tig0031362:21597-21616 | None:intergenic | 25.0% |
| ! | TTCAAATCAAACAACAGAAT+AGG | - | tig0031362:21764-21783 | None:intergenic | 25.0% |
| !!! | TATTCTGTTGTTTGATTTGA+AGG | + | tig0031362:21763-21782 | Msa1446430:intron | 25.0% |
| !!! | AGATTGTTTCTGAAAATTTG+TGG | + | tig0031362:21895-21914 | Msa1446430:intron | 25.0% |
| !!! | GATTGTTTCTGAAAATTTGT+GGG | + | tig0031362:21896-21915 | Msa1446430:intron | 25.0% |
| !!! | ATTGTTTCTGAAAATTTGTG+GGG | + | tig0031362:21897-21916 | Msa1446430:intron | 25.0% |
| ! | ATTTCGTACAAAGTCATTTA+GGG | - | tig0031362:21951-21970 | None:intergenic | 25.0% |
| ! | TATTTCGTACAAAGTCATTT+AGG | - | tig0031362:21952-21971 | None:intergenic | 25.0% |
| ! | AAAAGACTAAGTGATTAAGT+TGG | + | tig0031362:22144-22163 | Msa1446430:intron | 25.0% |
| !!! | TAGAAATTTTTTGGCTTACT+AGG | + | tig0031362:22360-22379 | Msa1446430:intron | 25.0% |
| ! | TGAAGGAACAAATATCAAAA+GGG | - | tig0031362:22447-22466 | None:intergenic | 25.0% |
| ! | ATGAAGGAACAAATATCAAA+AGG | - | tig0031362:22448-22467 | None:intergenic | 25.0% |
| ! | TCTTCTTAATTTATCCATTC+TGG | + | tig0031362:22766-22785 | Msa1446430:intron | 25.0% |
| ! | AACAATGATTTCCAACTTTA+TGG | - | tig0031362:23285-23304 | None:intergenic | 25.0% |
| ! | ATATCATTGCACAAAAGAAA+AGG | - | tig0031362:23781-23800 | None:intergenic | 25.0% |
| !!! | CAATGATATTGCTATTTCTT+CGG | + | tig0031362:23792-23811 | Msa1446430:intron | 25.0% |
| !!! | AGGCTTTATTATGACTATAA+TGG | + | tig0031362:23950-23969 | Msa1446430:CDS | 25.0% |
| ! | AAAATTGGTCCTAATTCTAT+AGG | - | tig0031362:24041-24060 | None:intergenic | 25.0% |
| !! | AATTTCTTAAAGTGTTACTG+TGG | + | tig0031362:24133-24152 | Msa1446430:three_prime_UTR | 25.0% |
| !! | ATTTCTTAAAGTGTTACTGT+GGG | + | tig0031362:24134-24153 | Msa1446430:three_prime_UTR | 25.0% |
| ! | AATTACTAAGCCACATAATT+AGG | - | tig0031362:24191-24210 | None:intergenic | 25.0% |
| GTACTTAAACATACATGCAT+AGG | - | tig0031362:16044-16063 | None:intergenic | 30.0% | |
| ! | TTTTGATGTGATTCAGAGTT+TGG | + | tig0031362:16585-16604 | Msa1446430:intron | 30.0% |
| ATTGGAAATTGAGAAAATGG+TGG | + | tig0031362:16641-16660 | Msa1446430:intron | 30.0% | |
| GAAACTACAGAGAGAAAATA+CGG | - | tig0031362:16817-16836 | None:intergenic | 30.0% | |
| GAATATGCTAGAAAATAACG+AGG | + | tig0031362:16864-16883 | Msa1446430:intron | 30.0% | |
| ACCTTCATTTGTTTGAATCA+AGG | + | tig0031362:16900-16919 | Msa1446430:intron | 30.0% | |
| CCTTCATTTGTTTGAATCAA+GGG | + | tig0031362:16901-16920 | Msa1446430:intron | 30.0% | |
| TTAACTACGAATCACACTAA+AGG | - | tig0031362:17098-17117 | None:intergenic | 30.0% | |
| ! | ATGTATTGCAAAAGTGTGAA+TGG | - | tig0031362:17121-17140 | None:intergenic | 30.0% |
| ATTGAAAGTTGAAAAGCAAG+TGG | + | tig0031362:17295-17314 | Msa1446430:intron | 30.0% | |
| AACTATCTCATTAGCATATG+TGG | - | tig0031362:17337-17356 | None:intergenic | 30.0% | |
| ATGAGATAGTTGTTCAGAAA+TGG | + | tig0031362:17346-17365 | Msa1446430:intron | 30.0% | |
| AGAAATGGTGGCATAATTTA+TGG | + | tig0031362:17361-17380 | Msa1446430:intron | 30.0% | |
| ! | TTCTTTGGAAATTGGAAAAC+AGG | + | tig0031362:17436-17455 | Msa1446430:intron | 30.0% |
| AAAATGTGCCACACAATTTA+TGG | + | tig0031362:17508-17527 | Msa1446430:intron | 30.0% | |
| ! | GGTCATTCAAGATTTTTGAA+AGG | + | tig0031362:17671-17690 | Msa1446430:intron | 30.0% |
| GCATACATGGTAAGATAAAT+AGG | - | tig0031362:17736-17755 | None:intergenic | 30.0% | |
| !!! | AGATAGTTTTTTGAAAGTGG+TGG | + | tig0031362:17761-17780 | Msa1446430:intron | 30.0% |
| AACAATACATGCATTGCAAA+AGG | - | tig0031362:17976-17995 | None:intergenic | 30.0% | |
| ! | AAACAACTTGATAGCATACA+TGG | - | tig0031362:18039-18058 | None:intergenic | 30.0% |
| TGAGTATATGGCAAGATAAT+CGG | - | tig0031362:18169-18188 | None:intergenic | 30.0% | |
| ATGAAATCGGATTGAGTATA+TGG | - | tig0031362:18181-18200 | None:intergenic | 30.0% | |
| ACCCAAAAAATAAAACAGAG+AGG | + | tig0031362:18490-18509 | Msa1446430:intron | 30.0% | |
| !!! | CACCTCTCTGTTTTATTTTT+TGG | - | tig0031362:18495-18514 | None:intergenic | 30.0% |
| ATAAAACAGAGAGGTGATTT+AGG | + | tig0031362:18499-18518 | Msa1446430:intron | 30.0% | |
| AGGTGATTTAGGTAATAAAG+CGG | + | tig0031362:18510-18529 | Msa1446430:intron | 30.0% | |
| !!! | AAAGCGGATTTTTTTTAACG+AGG | + | tig0031362:18526-18545 | Msa1446430:intron | 30.0% |
| ! | AATTGAATTTTATGCACGGT+TGG | - | tig0031362:18939-18958 | None:intergenic | 30.0% |
| ATTTCCCAAAAAAAAATGGC+CGG | - | tig0031362:19755-19774 | None:intergenic | 30.0% | |
| !!! | TTTTTGGTTCATTCATGGAA+TGG | + | tig0031362:19948-19967 | Msa1446430:intron | 30.0% |
| TCATCAAACATAACATTCAC+CGG | + | tig0031362:20059-20078 | Msa1446430:intron | 30.0% | |
| !! | TTGTGTTAACTCTAAAATGG+TGG | - | tig0031362:20220-20239 | None:intergenic | 30.0% |
| ! | AGCTTCTTTTGAATTTTGTG+AGG | - | tig0031362:20421-20440 | None:intergenic | 30.0% |
| AGAAAATTCTCCATTTCTTC+GGG | + | tig0031362:20852-20871 | Msa1446430:CDS | 30.0% | |
| ! | CATTTTGTCAATGCAATGTT+TGG | + | tig0031362:21021-21040 | Msa1446430:intron | 30.0% |
| !! | GTTTTTGATCAGTTGTTGTT+TGG | + | tig0031362:21070-21089 | Msa1446430:intron | 30.0% |
| TAAAGAAACATTGCCACAAA+CGG | - | tig0031362:21341-21360 | None:intergenic | 30.0% | |
| TTTAGAAATTGTGTTGGACA+TGG | + | tig0031362:21357-21376 | Msa1446430:intron | 30.0% | |
| ! | CTATAGATTTTTCCATCATC+AGG | + | tig0031362:21381-21400 | Msa1446430:intron | 30.0% |
| !!! | TTGTAGTTATTTTGGTGTCT+TGG | + | tig0031362:21429-21448 | Msa1446430:intron | 30.0% |
| !!! | TGTAGTTATTTTGGTGTCTT+GGG | + | tig0031362:21430-21449 | Msa1446430:intron | 30.0% |
| ATTCCTTCACAAATTGGTTA+TGG | + | tig0031362:21544-21563 | Msa1446430:intron | 30.0% | |
| ATTACTATCGCAAAAATAGG+AGG | - | tig0031362:21594-21613 | None:intergenic | 30.0% | |
| TGCATGACAAGTTATATGTA+AGG | + | tig0031362:21681-21700 | Msa1446430:intron | 30.0% | |
| TTATATGTAAGGCAGCTATA+AGG | + | tig0031362:21692-21711 | Msa1446430:intron | 30.0% | |
| ATAGAGATACCATCGTTTAA+TGG | + | tig0031362:22076-22095 | Msa1446430:intron | 30.0% | |
| TTTAATGGCACTTGAAATAG+AGG | + | tig0031362:22091-22110 | Msa1446430:intron | 30.0% | |
| ACTTATTCTCTAGCAAATCA+TGG | - | tig0031362:22285-22304 | None:intergenic | 30.0% | |
| TTGCTAGAGAATAAGTTACT+AGG | + | tig0031362:22289-22308 | Msa1446430:intron | 30.0% | |
| CAATTTCAGCAAAAACATGA+AGG | - | tig0031362:22464-22483 | None:intergenic | 30.0% | |
| ATGCTTATGTTTACCTAGAA+TGG | + | tig0031362:22491-22510 | Msa1446430:intron | 30.0% | |
| GTAAATGTGTTTACCATTCT+AGG | - | tig0031362:22507-22526 | None:intergenic | 30.0% | |
| !! | GTTCTAACTTCAAAAGTACT+CGG | + | tig0031362:22650-22669 | Msa1446430:intron | 30.0% |
| !! | TTCTAACTTCAAAAGTACTC+GGG | + | tig0031362:22651-22670 | Msa1446430:intron | 30.0% |
| !! | AATCGATCCATTTTAGAGAA+CGG | + | tig0031362:22993-23012 | Msa1446430:CDS | 30.0% |
| ! | AGTTTTCTCACACTTACAAA+TGG | + | tig0031362:23050-23069 | Msa1446430:intron | 30.0% |
| AGATATGCATGCTAATTAGA+CGG | - | tig0031362:23088-23107 | None:intergenic | 30.0% | |
| ATCAAACTAGAACACAATGA+CGG | - | tig0031362:23111-23130 | None:intergenic | 30.0% | |
| !! | TATTTGTTTGTTTTCCTCTC+AGG | + | tig0031362:23135-23154 | Msa1446430:intron | 30.0% |
| GAATCATAAACGACCAATAA+GGG | - | tig0031362:23229-23248 | None:intergenic | 30.0% | |
| TGAATCATAAACGACCAATA+AGG | - | tig0031362:23230-23249 | None:intergenic | 30.0% | |
| TTACACTCATACCATAAAGT+TGG | + | tig0031362:23271-23290 | Msa1446430:intron | 30.0% | |
| TATAGCTACATTGCATATCA+AGG | - | tig0031362:23336-23355 | None:intergenic | 30.0% | |
| ACATTTATTGCTGAATACAC+TGG | + | tig0031362:23388-23407 | Msa1446430:CDS | 30.0% | |
| AATTAAAGGGATAGAACACT+AGG | + | tig0031362:23598-23617 | Msa1446430:intron | 30.0% | |
| ATTAAAGGGATAGAACACTA+GGG | + | tig0031362:23599-23618 | Msa1446430:intron | 30.0% | |
| !! | ATATAAAATGGACTGCAAGA+AGG | - | tig0031362:23688-23707 | None:intergenic | 30.0% |
| AACATGTCCAATTTATATGC+AGG | + | tig0031362:23828-23847 | Msa1446430:intron | 30.0% | |
| ACATGTCCAATTTATATGCA+GGG | + | tig0031362:23829-23848 | Msa1446430:intron | 30.0% | |
| TGTGTGAGATATGATGTTAA+TGG | + | tig0031362:23878-23897 | Msa1446430:CDS | 30.0% | |
| TATGTGGCTTAGTAATTATG+TGG | + | tig0031362:24194-24213 | Msa1446430:three_prime_UTR | 30.0% | |
| ! | AAATGAAGAAGGTTTTCCTA+GGG | - | tig0031362:24239-24258 | None:intergenic | 30.0% |
| ! | TAAATGAAGAAGGTTTTCCT+AGG | - | tig0031362:24240-24259 | None:intergenic | 30.0% |
| CAGGACGATGACTAATATAA+TGG | + | tig0031362:15578-15597 | Msa1446430:intron | 35.0% | |
| GATGACTAATATAATGGCGA+GGG | + | tig0031362:15584-15603 | Msa1446430:CDS | 35.0% | |
| TAAATATGCAGTGGTTGAGA+AGG | + | tig0031362:15608-15627 | Msa1446430:CDS | 35.0% | |
| AAACCACTAGACTGTAACAA+CGG | - | tig0031362:15960-15979 | None:intergenic | 35.0% | |
| ! | GACGTTTTATGTGGAATCAT+GGG | + | tig0031362:15989-16008 | Msa1446430:intron | 35.0% |
| TAAACATACATGCATAGGGA+GGG | - | tig0031362:16039-16058 | None:intergenic | 35.0% | |
| TTAAACATACATGCATAGGG+AGG | - | tig0031362:16040-16059 | None:intergenic | 35.0% | |
| ACATATGGTGGCACAATTTA+TGG | + | tig0031362:16562-16581 | Msa1446430:intron | 35.0% | |
| GCAATACATGCATTGTTCAT+TGG | + | tig0031362:16623-16642 | Msa1446430:intron | 35.0% | |
| CCCTTGATTCAAACAAATGA+AGG | - | tig0031362:16904-16923 | None:intergenic | 35.0% | |
| TAAAAGCTCCAAAACAAGCA+TGG | - | tig0031362:16951-16970 | None:intergenic | 35.0% | |
| !! | CTTTTAAAGACCTCGTCTAT+TGG | + | tig0031362:16965-16984 | Msa1446430:intron | 35.0% |
| TCTTTGAATACCAAGCTAAC+TGG | + | tig0031362:17021-17040 | Msa1446430:intron | 35.0% | |
| ATATAGTTGTTAGGAAAGGG+TGG | + | tig0031362:17061-17080 | Msa1446430:intron | 35.0% | |
| AGATAGTTGTTCAGAAATGG+TGG | + | tig0031362:17349-17368 | Msa1446430:intron | 35.0% | |
| GCTTTAATGTGATTCGAAGT+CGG | + | tig0031362:17383-17402 | Msa1446430:intron | 35.0% | |
| TTTGGAAATTGGAAAACAGG+TGG | + | tig0031362:17439-17458 | Msa1446430:intron | 35.0% | |
| ACACTAAAGTGATTCGTTGT+CGG | + | tig0031362:17650-17669 | Msa1446430:intron | 35.0% | |
| GAAAGTGGTGGTACAATTTA+TGG | + | tig0031362:17773-17792 | Msa1446430:intron | 35.0% | |
| TTGAGACAATTGTTCGGAAA+TGG | + | tig0031362:17903-17922 | Msa1446430:intron | 35.0% | |
| ACTTTAATGCGAGTCATAGT+CGG | + | tig0031362:17940-17959 | Msa1446430:intron | 35.0% | |
| GCAATGCATGTATTGTTCAT+TGG | + | tig0031362:17979-17998 | Msa1446430:intron | 35.0% | |
| GTTCATTGGAAATTGAGAAG+AGG | + | tig0031362:17993-18012 | Msa1446430:intron | 35.0% | |
| ATGATGTTGAGACAGTTGTT+TGG | + | tig0031362:18367-18386 | Msa1446430:intron | 35.0% | |
| TGAGACAGTTGTTTGGAAAA+AGG | + | tig0031362:18374-18393 | Msa1446430:intron | 35.0% | |
| AAATGGCATACATGTTCTTG+TGG | + | tig0031362:19022-19041 | Msa1446430:intron | 35.0% | |
| AGTGAATAAATCAGGTGCTA+GGG | - | tig0031362:19097-19116 | None:intergenic | 35.0% | |
| AAGTGAATAAATCAGGTGCT+AGG | - | tig0031362:19098-19117 | None:intergenic | 35.0% | |
| TGTATGCAACATTTGTCTCT+AGG | - | tig0031362:19140-19159 | None:intergenic | 35.0% | |
| TCAAAGTTTGACATCAAACC+CGG | + | tig0031362:19733-19752 | Msa1446430:intron | 35.0% | |
| !!! | AAACCCGGCCATTTTTTTTT+GGG | + | tig0031362:19748-19767 | Msa1446430:intron | 35.0% |
| TTTCCCAAAAAAAAATGGCC+GGG | - | tig0031362:19754-19773 | None:intergenic | 35.0% | |
| AGTTTGTGTAATCAGTGCAT+TGG | + | tig0031362:19832-19851 | Msa1446430:intron | 35.0% | |
| GTTCATTCATGGAATGGAAA+CGG | + | tig0031362:19954-19973 | Msa1446430:intron | 35.0% | |
| !! | GAATGTTATGTTTGATGACG+TGG | - | tig0031362:20057-20076 | None:intergenic | 35.0% |
| GGTTGATTGTGAAATTCGAA+GGG | - | tig0031362:20312-20331 | None:intergenic | 35.0% | |
| ! | AGGTTGATTGTGAAATTCGA+AGG | - | tig0031362:20313-20332 | None:intergenic | 35.0% |
| ! | GATTAAGCTTGATAGCTTGA+TGG | - | tig0031362:20383-20402 | None:intergenic | 35.0% |
| ! | TTGAATTTTGTGAGGTGCAT+GGG | - | tig0031362:20413-20432 | None:intergenic | 35.0% |
| ! | TTTGAATTTTGTGAGGTGCA+TGG | - | tig0031362:20414-20433 | None:intergenic | 35.0% |
| TTGTGTGACAAATGTGACAA+TGG | + | tig0031362:20610-20629 | Msa1446430:CDS | 35.0% | |
| ! | GTACATTGAATCTTGATTCG+TGG | + | tig0031362:21149-21168 | Msa1446430:intron | 35.0% |
| AAAGAAACATTGCCACAAAC+GGG | - | tig0031362:21340-21359 | None:intergenic | 35.0% | |
| !! | TTTCACTAGCTTGCAGATTT+TGG | + | tig0031362:21720-21739 | Msa1446430:intron | 35.0% |
| !! | GTTGTTTGATTTGAAGGCAA+AGG | + | tig0031362:21769-21788 | Msa1446430:intron | 35.0% |
| ATAACAACTGCTAAGCAGTT+AGG | - | tig0031362:21810-21829 | None:intergenic | 35.0% | |
| GCTATCTGTTAAGGTAATAC+TGG | - | tig0031362:22039-22058 | None:intergenic | 35.0% | |
| ! | TTTCAAGTGCCATTAAACGA+TGG | - | tig0031362:22088-22107 | None:intergenic | 35.0% |
| !! | CTTGAAATAGAGGCATCAAA+AGG | + | tig0031362:22101-22120 | Msa1446430:intron | 35.0% |
| !! | GTCTTTTGTGTCACTAAACA+TGG | - | tig0031362:22131-22150 | None:intergenic | 35.0% |
| !! | TGATTAAGTTGGAGTCTTCA+CGG | + | tig0031362:22155-22174 | Msa1446430:intron | 35.0% |
| CGGAACAAGAAGAATTGAAA+TGG | + | tig0031362:22175-22194 | Msa1446430:intron | 35.0% | |
| AGAAGAATTGAAATGGATGC+TGG | + | tig0031362:22182-22201 | Msa1446430:intron | 35.0% | |
| !!! | TTTTGGCTTACTAGGTGTAT+AGG | + | tig0031362:22368-22387 | Msa1446430:intron | 35.0% |
| ! | ATAGCATCTAAAGTCCAGAA+TGG | - | tig0031362:22783-22802 | None:intergenic | 35.0% |
| CTAATTAGACGGTTTGCAAA+AGG | - | tig0031362:23077-23096 | None:intergenic | 35.0% | |
| TCGTTTATGATTCATGCCAA+GGG | + | tig0031362:23236-23255 | Msa1446430:CDS | 35.0% | |
| TATGCAATGTAGCTATACTG+TGG | + | tig0031362:23339-23358 | Msa1446430:intron | 35.0% | |
| TAACATGCAATAAGTGAGAC+AGG | - | tig0031362:23572-23591 | None:intergenic | 35.0% | |
| TTAAAGGGATAGAACACTAG+GGG | + | tig0031362:23600-23619 | Msa1446430:intron | 35.0% | |
| AATGGTATGCCACAGAAAAA+TGG | - | tig0031362:23638-23657 | None:intergenic | 35.0% | |
| ATGATGTTAATGGTGAAAGC+CGG | + | tig0031362:23888-23907 | Msa1446430:CDS | 35.0% | |
| CTCAGACAAAATGATGAGTT+GGG | - | tig0031362:23991-24010 | None:intergenic | 35.0% | |
| TCATGAAAATTCTTTCCCGA+GGG | - | tig0031362:24068-24087 | None:intergenic | 35.0% | |
| ATCATGAAAATTCTTTCCCG+AGG | - | tig0031362:24069-24088 | None:intergenic | 35.0% | |
| ! | TGTATTTTACGCCATATAGC+TGG | + | tig0031362:24165-24184 | Msa1446430:three_prime_UTR | 35.0% |
| ACATAATTAGGCCAGCTATA+TGG | - | tig0031362:24179-24198 | None:intergenic | 35.0% | |
| ! | ATATAGCTGGCCTAATTATG+TGG | + | tig0031362:24178-24197 | Msa1446430:three_prime_UTR | 35.0% |
| !! | AGTCTGTTGGCTTCTTCTTT+CGG | - | tig0031362:15536-15555 | None:intergenic | 40.0% |
| CGATGACTAATATAATGGCG+AGG | + | tig0031362:15583-15602 | Msa1446430:CDS | 40.0% | |
| TTGTGTGACAAATGCGACAA+AGG | + | tig0031362:15693-15712 | Msa1446430:CDS | 40.0% | |
| ! | TCATATGAAGTGTCTGAGAC+CGG | + | tig0031362:15719-15738 | Msa1446430:CDS | 40.0% |
| !! | CTAGAGTTCCTATTGGTTCA+TGG | + | tig0031362:15748-15767 | Msa1446430:CDS | 40.0% |
| AACCACTAGACTGTAACAAC+GGG | - | tig0031362:15959-15978 | None:intergenic | 40.0% | |
| GTTGTTACAGTCTAGTGGTT+TGG | + | tig0031362:15959-15978 | Msa1446430:intron | 40.0% | |
| ! | GGACGTTTTATGTGGAATCA+TGG | + | tig0031362:15988-16007 | Msa1446430:intron | 40.0% |
| AAACATACATGCATAGGGAG+GGG | - | tig0031362:16038-16057 | None:intergenic | 40.0% | |
| TCACTAACGGTTATGCATCA+GGG | - | tig0031362:16214-16233 | None:intergenic | 40.0% | |
| TTCACTAACGGTTATGCATC+AGG | - | tig0031362:16215-16234 | None:intergenic | 40.0% | |
| GAAAAGGGTGGCGTAATTTA+TGG | + | tig0031362:16388-16407 | Msa1446430:intron | 40.0% | |
| GGTGGTTCAAGTGTTTATCT+TGG | + | tig0031362:16659-16678 | Msa1446430:intron | 40.0% | |
| TGCAAAACAACCAATAGACG+AGG | - | tig0031362:16978-16997 | None:intergenic | 40.0% | |
| GGAAAGGGTGACACAATTTA+TGG | + | tig0031362:17217-17236 | Msa1446430:intron | 40.0% | |
| CTTTAATGCGAGTCATAGTC+GGG | + | tig0031362:17941-17960 | Msa1446430:intron | 40.0% | |
| GTGAATAAATCAGGTGCTAG+GGG | - | tig0031362:19096-19115 | None:intergenic | 40.0% | |
| !!! | CAAACCCGGCCATTTTTTTT+TGG | + | tig0031362:19747-19766 | Msa1446430:intron | 40.0% |
| !! | TTTGATGACGTGGAATGTTC+TGG | - | tig0031362:20047-20066 | None:intergenic | 40.0% |
| TGATTGTGAAATTCGAAGGG+TGG | - | tig0031362:20309-20328 | None:intergenic | 40.0% | |
| ! | CTTGATAGCTTGATGGAAGA+CGG | - | tig0031362:20376-20395 | None:intergenic | 40.0% |
| ATATAAGAGGGCTGAGTACA+CGG | + | tig0031362:20510-20529 | Msa1446430:intron | 40.0% | |
| ATCGGAACTCGAACAACAAT+TGG | - | tig0031362:20658-20677 | None:intergenic | 40.0% | |
| ! | ATTGTTGTTCGAGTTCCGAT+TGG | + | tig0031362:20658-20677 | Msa1446430:CDS | 40.0% |
| AACAATCGTGCTTCTTCTCA+GGG | + | tig0031362:20902-20921 | Msa1446430:CDS | 40.0% | |
| !! | TTGGCTTTGTGAAAGTGATG+TGG | + | tig0031362:21089-21108 | Msa1446430:intron | 40.0% |
| ACAAACGGGCAACTTTCATA+AGG | - | tig0031362:21326-21345 | None:intergenic | 40.0% | |
| TTATGAAAGTTGCCCGTTTG+TGG | + | tig0031362:21325-21344 | Msa1446430:intron | 40.0% | |
| AAATTTGTGGAGCCTGATGA+TGG | - | tig0031362:21396-21415 | None:intergenic | 40.0% | |
| GTTGCAATGGCGTGTTTATA+TGG | - | tig0031362:21501-21520 | None:intergenic | 40.0% | |
| ACCAATTTGTGAAGGAATGC+CGG | - | tig0031362:21542-21561 | None:intergenic | 40.0% | |
| CCACCATAACCAATTTGTGA+AGG | - | tig0031362:21550-21569 | None:intergenic | 40.0% | |
| CCTTCACAAATTGGTTATGG+TGG | + | tig0031362:21547-21566 | Msa1446430:intron | 40.0% | |
| !! | GTTTGATTTGAAGGCAAAGG+AGG | + | tig0031362:21772-21791 | Msa1446430:intron | 40.0% |
| TAAGCAGTTAGGCGTTTGAT+CGG | - | tig0031362:21799-21818 | None:intergenic | 40.0% | |
| GGTTCTTGAGCTATCTGTTA+AGG | - | tig0031362:22048-22067 | None:intergenic | 40.0% | |
| ATGGTATCTCTATTGTCAGG+TGG | - | tig0031362:22069-22088 | None:intergenic | 40.0% | |
| ACGATGGTATCTCTATTGTC+AGG | - | tig0031362:22072-22091 | None:intergenic | 40.0% | |
| CTTTAGATGCTATGAAGCGT+CGG | + | tig0031362:22790-22809 | Msa1446430:intron | 40.0% | |
| TGGTACAGAAGAAAAGGAGA+AGG | + | tig0031362:22832-22851 | Msa1446430:CDS | 40.0% | |
| GGATCTTCTGTAGGAACAAA+TGG | - | tig0031362:22864-22883 | None:intergenic | 40.0% | |
| TTCCTACAGAAGATCCTGAT+AGG | + | tig0031362:22868-22887 | Msa1446430:CDS | 40.0% | |
| TGCTGTTAAAGCAGTAGCAA+GGG | - | tig0031362:22913-22932 | None:intergenic | 40.0% | |
| ATGCTGTTAAAGCAGTAGCA+AGG | - | tig0031362:22914-22933 | None:intergenic | 40.0% | |
| TGCTACTGCTTTAACAGCAT+TGG | + | tig0031362:22914-22933 | Msa1446430:CDS | 40.0% | |
| AATAAGCTGACGTACTTTCC+AGG | + | tig0031362:22951-22970 | Msa1446430:CDS | 40.0% | |
| ATGGATCGATTAGCAGATCT+AGG | - | tig0031362:22984-23003 | None:intergenic | 40.0% | |
| ! | CATAGCTATGCAGCGTTTTA+AGG | - | tig0031362:23185-23204 | None:intergenic | 40.0% |
| TGCATAGCTATGACTAAACG+AGG | + | tig0031362:23193-23212 | Msa1446430:CDS | 40.0% | |
| CATAAACGACCAATAAGGGA+GGG | - | tig0031362:23225-23244 | None:intergenic | 40.0% | |
| TCATAAACGACCAATAAGGG+AGG | - | tig0031362:23226-23245 | None:intergenic | 40.0% | |
| GTCGTTTATGATTCATGCCA+AGG | + | tig0031362:23235-23254 | Msa1446430:CDS | 40.0% | |
| GTAAGATGAGTATGTACCCT+TGG | - | tig0031362:23255-23274 | None:intergenic | 40.0% | |
| ! | GTTATCTGTGCTGATAAACG+TGG | + | tig0031362:23499-23518 | Msa1446430:CDS | 40.0% |
| !! | TGTGAACGACCATTTTTCTG+TGG | + | tig0031362:23626-23645 | Msa1446430:intron | 40.0% |
| GGACTGCAAGAAGGATTATT+TGG | - | tig0031362:23679-23698 | None:intergenic | 40.0% | |
| GTCCAATTTATATGCAGGGA+AGG | + | tig0031362:23833-23852 | Msa1446430:intron | 40.0% | |
| TGCCTTCCCTGCATATAAAT+TGG | - | tig0031362:23838-23857 | None:intergenic | 40.0% | |
| AATTTATATGCAGGGAAGGC+AGG | + | tig0031362:23837-23856 | Msa1446430:intron | 40.0% | |
| TGATGTTAATGGTGAAAGCC+GGG | + | tig0031362:23889-23908 | Msa1446430:CDS | 40.0% | |
| TGCTACTCGAGATATTTCCA+AGG | + | tig0031362:23922-23941 | Msa1446430:CDS | 40.0% | |
| GCTACTCGAGATATTTCCAA+GGG | + | tig0031362:23923-23942 | Msa1446430:CDS | 40.0% | |
| CTACTCGAGATATTTCCAAG+GGG | + | tig0031362:23924-23943 | Msa1446430:CDS | 40.0% | |
| TACTCGAGATATTTCCAAGG+GGG | + | tig0031362:23925-23944 | Msa1446430:CDS | 40.0% | |
| GCTCAGACAAAATGATGAGT+TGG | - | tig0031362:23992-24011 | None:intergenic | 40.0% | |
| !! | AGGACCAATTTTTAGACCCT+CGG | + | tig0031362:24049-24068 | Msa1446430:three_prime_UTR | 40.0% |
| TTTCCCGAGGGTCTAAAAAT+TGG | - | tig0031362:24056-24075 | None:intergenic | 40.0% | |
| AGAGATGAATAGAGAACCCT+AGG | + | tig0031362:24220-24239 | Msa1446430:three_prime_UTR | 40.0% | |
| !! | TGAAGCTGGTTAGCTTACGA+GGG | - | tig0031362:15488-15507 | None:intergenic | 45.0% |
| ATATGCAGTGGTTGAGAAGG+AGG | + | tig0031362:15611-15630 | Msa1446430:CDS | 45.0% | |
| TCACACAACAAAAGCTCCTC+AGG | - | tig0031362:15681-15700 | None:intergenic | 45.0% | |
| ATAGGAACTCTAGCCAGAAC+CGG | - | tig0031362:15741-15760 | None:intergenic | 45.0% | |
| ! | GTTCTGGCTAGAGTTCCTAT+TGG | + | tig0031362:15741-15760 | Msa1446430:CDS | 45.0% |
| GGGCAAATCCATGAACCAAT+AGG | - | tig0031362:15759-15778 | None:intergenic | 45.0% | |
| TCCAGCTCAGAACAACACTT+GGG | - | tig0031362:15780-15799 | None:intergenic | 45.0% | |
| !! | AGTCTAGTGGTTTGGTTGTG+AGG | + | tig0031362:15967-15986 | Msa1446430:intron | 45.0% |
| ! | GGTTGTGAGGACGTTTTATG+TGG | + | tig0031362:15980-15999 | Msa1446430:intron | 45.0% |
| TGGAATCATGGGTTCAAACC+TGG | + | tig0031362:16000-16019 | Msa1446430:intron | 45.0% | |
| GGAATCATGGGTTCAAACCT+GGG | + | tig0031362:16001-16020 | Msa1446430:intron | 45.0% | |
| AACATACATGCATAGGGAGG+GGG | - | tig0031362:16037-16056 | None:intergenic | 45.0% | |
| TTAAGTACGTGTCAGTCACC+AGG | + | tig0031362:16056-16075 | Msa1446430:intron | 45.0% | |
| ATATGTGGCACCAGTTAGCT+TGG | - | tig0031362:17034-17053 | None:intergenic | 45.0% | |
| GAAATGTTAACTAGTGCCCC+CGG | + | tig0031362:19770-19789 | Msa1446430:intron | 45.0% | |
| AAATGTTAACTAGTGCCCCC+GGG | + | tig0031362:19771-19790 | Msa1446430:intron | 45.0% | |
| TTTATGCGTGCGCATTGTTC+TGG | - | tig0031362:19986-20005 | None:intergenic | 45.0% | |
| TTGGTTATGCTAACGTGCAC+CGG | - | tig0031362:20024-20043 | None:intergenic | 45.0% | |
| ATGACGTGGAATGTTCTGGT+TGG | - | tig0031362:20043-20062 | None:intergenic | 45.0% | |
| CACAATCAACCTCACCTGAA+TGG | + | tig0031362:20321-20340 | Msa1446430:intron | 45.0% | |
| ACCTTGACATCAGAACACCT+CGG | - | tig0031362:20697-20716 | None:intergenic | 45.0% | |
| CGTAGGGATTCTCTTGATTC+CGG | + | tig0031362:20878-20897 | Msa1446430:CDS | 45.0% | |
| GTAGGGATTCTCTTGATTCC+GGG | + | tig0031362:20879-20898 | Msa1446430:CDS | 45.0% | |
| ! | AGAAGAAGCACGATTGTTCC+CGG | - | tig0031362:20900-20919 | None:intergenic | 45.0% |
| GAACAATCGTGCTTCTTCTC+AGG | + | tig0031362:20901-20920 | Msa1446430:CDS | 45.0% | |
| GAGTTGAGTAATGCTGTCGA+TGG | + | tig0031362:21457-21476 | Msa1446430:intron | 45.0% | |
| TTGAGTAATGCTGTCGATGG+CGG | + | tig0031362:21460-21479 | Msa1446430:intron | 45.0% | |
| GCAATGGCGTGTTTATATGG+CGG | - | tig0031362:21498-21517 | None:intergenic | 45.0% | |
| AAACACGCCATTGCAACCTA+AGG | + | tig0031362:21504-21523 | Msa1446430:intron | 45.0% | |
| ATCGCAAAAATAGGAGGCCA+TGG | - | tig0031362:21588-21607 | None:intergenic | 45.0% | |
| !! | CTTGCAGATTTTGGTGCAAC+TGG | + | tig0031362:21729-21748 | Msa1446430:intron | 45.0% |
| AAGCAGTTAGGCGTTTGATC+GGG | - | tig0031362:21798-21817 | None:intergenic | 45.0% | |
| ! | TTGTGGGGATTCTAGCTATG+TGG | + | tig0031362:21912-21931 | Msa1446430:intron | 45.0% |
| ! | CTTTTCTTCTGTACCACCAG+AGG | - | tig0031362:22828-22847 | None:intergenic | 45.0% |
| CTCTGGTGGTACAGAAGAAA+AGG | + | tig0031362:22826-22845 | Msa1446430:CDS | 45.0% | |
| CTCCTATCAGGATCTTCTGT+AGG | - | tig0031362:22873-22892 | None:intergenic | 45.0% | |
| CTACAGAAGATCCTGATAGG+AGG | + | tig0031362:22871-22890 | Msa1446430:CDS | 45.0% | |
| ATTTGCTTCAGCCTCCTATC+AGG | - | tig0031362:22885-22904 | None:intergenic | 45.0% | |
| TGATAGGAGGCTGAAGCAAA+TGG | + | tig0031362:22884-22903 | Msa1446430:CDS | 45.0% | |
| !! | CGATCCATTTTAGAGAACGG+TGG | + | tig0031362:22996-23015 | Msa1446430:CDS | 45.0% |
| ! | CATGCCACCGTTCTCTAAAA+TGG | - | tig0031362:23003-23022 | None:intergenic | 45.0% |
| TTCCTCTCAGGCTCTTACTA+AGG | + | tig0031362:23147-23166 | Msa1446430:intron | 45.0% | |
| TTCCTTAGTAAGAGCCTGAG+AGG | - | tig0031362:23152-23171 | None:intergenic | 45.0% | |
| GCAATGTAGCTATACTGTGG+AGG | + | tig0031362:23342-23361 | Msa1446430:intron | 45.0% | |
| AACATTGCTCGCTTCATCAG+TGG | + | tig0031362:23523-23542 | Msa1446430:CDS | 45.0% | |
| GAGTAGCAACCAATAAGACC+CGG | - | tig0031362:23910-23929 | None:intergenic | 45.0% | |
| ATAATAAAGCCTCTCCCCCT+TGG | - | tig0031362:23942-23961 | None:intergenic | 45.0% | |
| !! | GGACCAATTTTTAGACCCTC+GGG | + | tig0031362:24050-24069 | Msa1446430:three_prime_UTR | 45.0% |
| !!! | ATATATTTTATTTTCATTAT+TGG | - | tig0031362:16082-16101 | None:intergenic | 5.0% |
| !! | ATTGTAAAAAAATTATAAAT+TGG | + | tig0031362:19441-19460 | Msa1446430:intron | 5.0% |
| !! | TTGTAAAAAAATTATAAATT+GGG | + | tig0031362:19442-19461 | Msa1446430:intron | 5.0% |
| !! | AAGCTGGTTAGCTTACGAGG+GGG | - | tig0031362:15486-15505 | None:intergenic | 50.0% |
| !! | GAAGCTGGTTAGCTTACGAG+GGG | - | tig0031362:15487-15506 | None:intergenic | 50.0% |
| !! | GTGAAGCTGGTTAGCTTACG+AGG | - | tig0031362:15489-15508 | None:intergenic | 50.0% |
| !! | CTGTTGGCTTCTTCTTTCGG+TGG | - | tig0031362:15533-15552 | None:intergenic | 50.0% |
| ATGTGTGAGCGATGTGGATC+TGG | + | tig0031362:15648-15667 | Msa1446430:CDS | 50.0% | |
| TGGATCTGGTGAACAACCTG+AGG | + | tig0031362:15662-15681 | Msa1446430:CDS | 50.0% | |
| CCAGCTCAGAACAACACTTG+GGG | - | tig0031362:15779-15798 | None:intergenic | 50.0% | |
| CTCCAGCTCAGAACAACACT+TGG | - | tig0031362:15781-15800 | None:intergenic | 50.0% | |
| GTCCCGTTGTTACAGTCTAG+TGG | + | tig0031362:15954-15973 | Msa1446430:intron | 50.0% | |
| ! | GCTCGTGACCATGCTTGTTT+TGG | + | tig0031362:16940-16959 | Msa1446430:intron | 50.0% |
| AATGTTAACTAGTGCCCCCG+GGG | + | tig0031362:19772-19791 | Msa1446430:intron | 50.0% | |
| TAGGTCCTTAATCAGTGCCC+CGG | - | tig0031362:19792-19811 | None:intergenic | 50.0% | |
| !! | AGCATGCTTAAAGAGTGCCC+CGG | + | tig0031362:19898-19917 | Msa1446430:intron | 50.0% |
| ! | TTTTGTTAACGAGTGCCCCC+GGG | - | tig0031362:19919-19938 | None:intergenic | 50.0% |
| !! | GTTTTGTTAACGAGTGCCCC+CGG | - | tig0031362:19920-19939 | None:intergenic | 50.0% |
| TTACGTTACTCTCTCACCCG+CGG | - | tig0031362:20101-20120 | None:intergenic | 50.0% | |
| ! | TTTTGTGAGGTGCATGGGTG+CGG | - | tig0031362:20408-20427 | None:intergenic | 50.0% |
| ACCTCCTGTGTGAGCAATGT+GGG | + | tig0031362:20560-20579 | Msa1446430:CDS | 50.0% | |
| TCACACAAAAGCAGCTCCTC+CGG | - | tig0031362:20598-20617 | None:intergenic | 50.0% | |
| CCTTGACATCAGAACACCTC+GGG | - | tig0031362:20696-20715 | None:intergenic | 50.0% | |
| TCCATTTCTTCGGGCTTCGT+AGG | + | tig0031362:20861-20880 | Msa1446430:CDS | 50.0% | |
| CCATTTCTTCGGGCTTCGTA+GGG | + | tig0031362:20862-20881 | Msa1446430:CDS | 50.0% | |
| TGTGAAGGAATGCCGGCAAA+TGG | - | tig0031362:21535-21554 | None:intergenic | 50.0% | |
| GCCGGCATTCCTTCACAAAT+TGG | + | tig0031362:21538-21557 | Msa1446430:intron | 50.0% | |
| GGTTACCGAAAAATCCGCCA+TGG | + | tig0031362:21568-21587 | Msa1446430:intron | 50.0% | |
| GCAAAAATAGGAGGCCATGG+CGG | - | tig0031362:21585-21604 | None:intergenic | 50.0% | |
| TTCTGTACCACCAGAGGTCT+TGG | - | tig0031362:22822-22841 | None:intergenic | 50.0% | |
| GCTGACGTACTTTCCAGGAA+TGG | + | tig0031362:22956-22975 | Msa1446430:CDS | 50.0% | |
| TTTAGAGAACGGTGGCATGC+AGG | + | tig0031362:23004-23023 | Msa1446430:CDS | 50.0% | |
| AGGCCAATTCCCTCCCTTAT+TGG | + | tig0031362:23213-23232 | Msa1446430:CDS | 50.0% | |
| CGACCAATAAGGGAGGGAAT+TGG | - | tig0031362:23219-23238 | None:intergenic | 50.0% | |
| ! | TGGTGAAAGCCGGGTCTTAT+TGG | + | tig0031362:23898-23917 | Msa1446430:CDS | 50.0% |
| GAGATATTTCCAAGGGGGAG+AGG | + | tig0031362:23930-23949 | Msa1446430:CDS | 50.0% | |
| GGCTTCTTCTTTCGGTGGCA+CGG | - | tig0031362:15528-15547 | None:intergenic | 55.0% | |
| AGCCAACAGACTCGTCATCG+CGG | + | tig0031362:15544-15563 | Msa1446430:CDS | 55.0% | |
| GGCGAGGGCTAAATATGCAG+TGG | + | tig0031362:15599-15618 | Msa1446430:CDS | 55.0% | |
| GACTGCATGTGTGAGCGATG+TGG | + | tig0031362:15642-15661 | Msa1446430:CDS | 55.0% | |
| ! | GAAGTGTCTGAGACCGGTTC+TGG | + | tig0031362:15725-15744 | Msa1446430:CDS | 55.0% |
| ! | CCCCAAGTGTTGTTCTGAGC+TGG | + | tig0031362:15776-15795 | Msa1446430:CDS | 55.0% |
| ATGCATAGGGAGGGGGAATG+TGG | - | tig0031362:16030-16049 | None:intergenic | 55.0% | |
| AGGTCCTTAATCAGTGCCCC+GGG | - | tig0031362:19791-19810 | None:intergenic | 55.0% | |
| !! | GCATGCTTAAAGAGTGCCCC+GGG | + | tig0031362:19899-19918 | Msa1446430:intron | 55.0% |
| !! | CATGCTTAAAGAGTGCCCCG+GGG | + | tig0031362:19900-19919 | Msa1446430:intron | 55.0% |
| !! | ATGCTTAAAGAGTGCCCCGG+GGG | + | tig0031362:19901-19920 | Msa1446430:intron | 55.0% |
| TTTGTTAACGAGTGCCCCCG+GGG | - | tig0031362:19918-19937 | None:intergenic | 55.0% | |
| CGGGAGAGTGAGACACTTAC+CGG | - | tig0031362:20081-20100 | None:intergenic | 55.0% | |
| GTAAGTGTCTCACTCTCCCG+CGG | + | tig0031362:20081-20100 | Msa1446430:intron | 55.0% | |
| TAAGTGTCTCACTCTCCCGC+GGG | + | tig0031362:20082-20101 | Msa1446430:intron | 55.0% | |
| TACGTTACTCTCTCACCCGC+GGG | - | tig0031362:20100-20119 | None:intergenic | 55.0% | |
| CAACCTCACCTGAATGGCTC+CGG | + | tig0031362:20327-20346 | Msa1446430:intron | 55.0% | |
| AGCTTGATGGAAGACGGCGA+TGG | - | tig0031362:20370-20389 | None:intergenic | 55.0% | |
| TAAGAGGGCTGAGTACACGG+TGG | + | tig0031362:20513-20532 | Msa1446430:intron | 55.0% | |
| GCTGAGGAGGAGGAGGATTA+CGG | + | tig0031362:20535-20554 | Msa1446430:CDS | 55.0% | |
| GACCTCCTGTGTGAGCAATG+TGG | + | tig0031362:20559-20578 | Msa1446430:CDS | 55.0% | |
| ACCCACATTGCTCACACAGG+AGG | - | tig0031362:20564-20583 | None:intergenic | 55.0% | |
| CTGTGTGAGCAATGTGGGTC+CGG | + | tig0031362:20565-20584 | Msa1446430:CDS | 55.0% | |
| ATGTGGGTCCGGTGAACAAC+CGG | + | tig0031362:20576-20595 | Msa1446430:CDS | 55.0% | |
| ! | TTCGAGTTCCGATTGGTCCG+TGG | + | tig0031362:20665-20684 | Msa1446430:CDS | 55.0% |
| GGGCAAATCCACGGACCAAT+CGG | - | tig0031362:20676-20695 | None:intergenic | 55.0% | |
| GAACACCTCGGGCAAATCCA+CGG | - | tig0031362:20685-20704 | None:intergenic | 55.0% | |
| ! | CCCGAGGTGTTCTGATGTCA+AGG | + | tig0031362:20693-20712 | Msa1446430:CDS | 55.0% |
| CCCTACGAAGCCCGAAGAAA+TGG | - | tig0031362:20865-20884 | None:intergenic | 55.0% | |
| !! | GTAATGCTGTCGATGGCGGA+AGG | + | tig0031362:21464-21483 | Msa1446430:intron | 55.0% |
| GAAGGAATGCCGGCAAATGG+TGG | - | tig0031362:21532-21551 | None:intergenic | 55.0% | |
| !!! | GGAGGCCATGGCGGATTTTT+CGG | - | tig0031362:21576-21595 | None:intergenic | 55.0% |
| GCAGATCTAGGAGCCATTCC+TGG | - | tig0031362:22972-22991 | None:intergenic | 55.0% | |
| ! | GTTAGCTTACGAGGGGGAGG+TGG | - | tig0031362:15480-15499 | None:intergenic | 60.0% |
| !! | CTGGTTAGCTTACGAGGGGG+AGG | - | tig0031362:15483-15502 | None:intergenic | 60.0% |
| GCCAACAGACTCGTCATCGC+GGG | + | tig0031362:15545-15564 | Msa1446430:CDS | 60.0% | |
| ACCCGCGATGACGAGTCTGT+TGG | - | tig0031362:15549-15568 | None:intergenic | 60.0% | |
| CATCGCGGGTGACGAAGTAC+AGG | + | tig0031362:15559-15578 | Msa1446430:intron | 60.0% | |
| GTCCTTAATCAGTGCCCCGG+GGG | - | tig0031362:19789-19808 | None:intergenic | 60.0% | |
| GGTCCTTAATCAGTGCCCCG+GGG | - | tig0031362:19790-19809 | None:intergenic | 60.0% | |
| CTCGAAGGTGGAGGATGAGG+AGG | - | tig0031362:20452-20471 | None:intergenic | 60.0% | |
| CTCCTCATCCTCCACCTTCG+AGG | + | tig0031362:20450-20469 | Msa1446430:CDS | 60.0% | |
| CTCCTCGAAGGTGGAGGATG+AGG | - | tig0031362:20455-20474 | None:intergenic | 60.0% | |
| CTCATCCTCCACCTTCGAGG+AGG | + | tig0031362:20453-20472 | Msa1446430:CDS | 60.0% | |
| ATCCTCCACCTTCGAGGAGG+AGG | + | tig0031362:20456-20475 | Msa1446430:CDS | 60.0% | |
| TCCACCTTCGAGGAGGAGGA+GGG | + | tig0031362:20460-20479 | Msa1446430:CDS | 60.0% | |
| ATTCCCCTCCTCCTCCTCGA+AGG | - | tig0031362:20467-20486 | None:intergenic | 60.0% | |
| TGAGTACACGGTGGCTGAGG+AGG | + | tig0031362:20522-20541 | Msa1446430:CDS | 60.0% | |
| CGGACCCACATTGCTCACAC+AGG | - | tig0031362:20567-20586 | None:intergenic | 60.0% | |
| CAGCTCCTCCGGTTGTTCAC+CGG | - | tig0031362:20587-20606 | None:intergenic | 60.0% | |
| TTGGTCCGTGGATTTGCCCG+AGG | + | tig0031362:20677-20696 | Msa1446430:CDS | 60.0% | |
| ! | GGTGGCGCCTTAGGTTGCAA+TGG | - | tig0031362:21514-21533 | None:intergenic | 60.0% |
| ! | CCTAAGGCGCCACCATTTGC+CGG | + | tig0031362:21520-21539 | Msa1446430:intron | 60.0% |
| TCGGAGACGTCCAAGACCTC+TGG | + | tig0031362:22809-22828 | Msa1446430:CDS | 60.0% | |
| GAGACGTCCAAGACCTCTGG+TGG | + | tig0031362:22812-22831 | Msa1446430:CDS | 60.0% | |
| ATGTGTGCGGCGGGTGAAGC+TGG | - | tig0031362:15502-15521 | None:intergenic | 65.0% | |
| GGTGGCACGGTGCATGTGTG+CGG | - | tig0031362:15515-15534 | None:intergenic | 65.0% | |
| GAGGGGGAATGTGGTGACCC+AGG | - | tig0031362:16021-16040 | None:intergenic | 65.0% | |
| !! | TGCCCCCGGGGCACTGATTA+AGG | + | tig0031362:19784-19803 | Msa1446430:intron | 65.0% |
| TCGCCGGAGCCATTCAGGTG+AGG | - | tig0031362:20333-20352 | None:intergenic | 65.0% | |
| AGCTGTCGCCGGAGCCATTC+AGG | - | tig0031362:20338-20357 | None:intergenic | 65.0% | |
| AATGGCTCCGGCGACAGCTC+CGG | + | tig0031362:20339-20358 | Msa1446430:intron | 65.0% | |
| GAAGACGGCGATGGAGACGC+CGG | - | tig0031362:20361-20380 | None:intergenic | 65.0% | |
| TGTGAGGTGCATGGGTGCGG+CGG | - | tig0031362:20405-20424 | None:intergenic | 65.0% | |
| CTCCTCCTCCTCGAAGGTGG+AGG | - | tig0031362:20461-20480 | None:intergenic | 65.0% | |
| CTCCACCTTCGAGGAGGAGG+AGG | + | tig0031362:20459-20478 | Msa1446430:CDS | 65.0% | |
| CCACCTTCGAGGAGGAGGAG+GGG | + | tig0031362:20461-20480 | Msa1446430:CDS | 65.0% | |
| GGCTGAGTACACGGTGGCTG+AGG | + | tig0031362:20519-20538 | Msa1446430:CDS | 65.0% | |
| GTACACGGTGGCTGAGGAGG+AGG | + | tig0031362:20525-20544 | Msa1446430:CDS | 65.0% | |
| TGGGTCCGGTGAACAACCGG+AGG | + | tig0031362:20579-20598 | Msa1446430:CDS | 65.0% | |
| ! | CCGGCAAATGGTGGCGCCTT+AGG | - | tig0031362:21523-21542 | None:intergenic | 65.0% |
| CTTACGAGGGGGAGGTGGCG+AGG | - | tig0031362:15475-15494 | None:intergenic | 70.0% | |
| GCACGGTGCATGTGTGCGGC+GGG | - | tig0031362:15511-15530 | None:intergenic | 70.0% | |
| GGCACGGTGCATGTGTGCGG+CGG | - | tig0031362:15512-15531 | None:intergenic | 70.0% | |
| CCCCTCCTCCTCCTCGAAGG+TGG | - | tig0031362:20464-20483 | None:intergenic | 70.0% | |
| CACGGTGGCTGAGGAGGAGG+AGG | + | tig0031362:20528-20547 | Msa1446430:CDS | 70.0% | |
| GGAGACGCCGGAGCTGTCGC+CGG | - | tig0031362:20349-20368 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0031362 | gene | 15440 | 24349 | 15440 | ID=Msa1446430;Name=Msa1446430 |
| tig0031362 | mRNA | 15440 | 24349 | 15440 | ID=Msa1446430-mRNA-1;Parent=Msa1446430;Name=Msa1446430-mRNA-1;_AED=0.05;_eAED=0.05;_QI=25|0.62|0.55|1|0.75|0.66|9|340|495 |
| tig0031362 | exon | 15440 | 15574 | 15440 | ID=Msa1446430-mRNA-1:exon:15405;Parent=Msa1446430-mRNA-1 |
| tig0031362 | exon | 15581 | 15810 | 15581 | ID=Msa1446430-mRNA-1:exon:15406;Parent=Msa1446430-mRNA-1 |
| tig0031362 | exon | 20356 | 20501 | 20356 | ID=Msa1446430-mRNA-1:exon:15407;Parent=Msa1446430-mRNA-1 |
| tig0031362 | exon | 20517 | 20730 | 20517 | ID=Msa1446430-mRNA-1:exon:15408;Parent=Msa1446430-mRNA-1 |
| tig0031362 | exon | 20840 | 20923 | 20840 | ID=Msa1446430-mRNA-1:exon:15409;Parent=Msa1446430-mRNA-1 |
| tig0031362 | exon | 22796 | 23025 | 22796 | ID=Msa1446430-mRNA-1:exon:15410;Parent=Msa1446430-mRNA-1 |
| tig0031362 | exon | 23157 | 23257 | 23157 | ID=Msa1446430-mRNA-1:exon:15411;Parent=Msa1446430-mRNA-1 |
| tig0031362 | exon | 23351 | 23563 | 23351 | ID=Msa1446430-mRNA-1:exon:15412;Parent=Msa1446430-mRNA-1 |
| tig0031362 | exon | 23850 | 24349 | 23850 | ID=Msa1446430-mRNA-1:exon:15413;Parent=Msa1446430-mRNA-1 |
| tig0031362 | five_prime_UTR | 15440 | 15464 | 15440 | ID=Msa1446430-mRNA-1:five_prime_utr;Parent=Msa1446430-mRNA-1 |
| tig0031362 | CDS | 15465 | 15574 | 15465 | ID=Msa1446430-mRNA-1:cds;Parent=Msa1446430-mRNA-1 |
| tig0031362 | CDS | 15581 | 15810 | 15581 | ID=Msa1446430-mRNA-1:cds;Parent=Msa1446430-mRNA-1 |
| tig0031362 | CDS | 20356 | 20501 | 20356 | ID=Msa1446430-mRNA-1:cds;Parent=Msa1446430-mRNA-1 |
| tig0031362 | CDS | 20517 | 20730 | 20517 | ID=Msa1446430-mRNA-1:cds;Parent=Msa1446430-mRNA-1 |
| tig0031362 | CDS | 20840 | 20923 | 20840 | ID=Msa1446430-mRNA-1:cds;Parent=Msa1446430-mRNA-1 |
| tig0031362 | CDS | 22796 | 23025 | 22796 | ID=Msa1446430-mRNA-1:cds;Parent=Msa1446430-mRNA-1 |
| tig0031362 | CDS | 23157 | 23257 | 23157 | ID=Msa1446430-mRNA-1:cds;Parent=Msa1446430-mRNA-1 |
| tig0031362 | CDS | 23351 | 23563 | 23351 | ID=Msa1446430-mRNA-1:cds;Parent=Msa1446430-mRNA-1 |
| tig0031362 | CDS | 23850 | 24009 | 23850 | ID=Msa1446430-mRNA-1:cds;Parent=Msa1446430-mRNA-1 |
| tig0031362 | three_prime_UTR | 24010 | 24349 | 24010 | ID=Msa1446430-mRNA-1:three_prime_utr;Parent=Msa1446430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
