Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1447530 | sp|Q9FIM0|AGL82_ARATH | 30.380 | 158 | 105 | 3 | 6 | 160 | 6 | 161 | 8.98e-17 | 83.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1447530 | A0A072VR19 | 92.090 | 354 | 19 | 2 | 1 | 352 | 1 | 347 | 0.0 | 655 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1447530 | TF | MADS-M-type |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1447530 | MtrunA17_Chr1g0212151 | 92.090 | 354 | 19 | 2 | 1 | 352 | 1 | 347 | 0.0 | 655 |
| Msa1447530 | MtrunA17_Chr6g0457851 | 73.596 | 356 | 80 | 3 | 1 | 352 | 11 | 356 | 0.0 | 533 |
| Msa1447530 | MtrunA17_Chr6g0449861 | 61.667 | 360 | 117 | 7 | 1 | 352 | 9 | 355 | 1.07e-143 | 413 |
| Msa1447530 | MtrunA17_Chr6g0449851 | 56.742 | 356 | 109 | 6 | 1 | 352 | 1 | 315 | 5.08e-131 | 379 |
| Msa1447530 | MtrunA17_Chr4g0059631 | 41.935 | 155 | 87 | 1 | 1 | 155 | 1 | 152 | 1.76e-35 | 131 |
| Msa1447530 | MtrunA17_Chr1g0212471 | 32.796 | 186 | 124 | 1 | 1 | 186 | 1 | 185 | 1.16e-32 | 122 |
| Msa1447530 | MtrunA17_Chr4g0022641 | 37.126 | 167 | 102 | 1 | 1 | 167 | 1 | 164 | 2.06e-30 | 120 |
| Msa1447530 | MtrunA17_Chr2g0303981 | 38.365 | 159 | 93 | 2 | 3 | 160 | 5 | 159 | 6.75e-29 | 111 |
| Msa1447530 | MtrunA17_Chr5g0432691 | 34.454 | 119 | 70 | 4 | 1 | 118 | 1 | 112 | 1.69e-15 | 73.9 |
| Msa1447530 | MtrunA17_Chr3g0134451 | 33.945 | 109 | 64 | 3 | 1 | 109 | 1 | 101 | 3.10e-14 | 73.2 |
| Msa1447530 | MtrunA17_Chr3g0107381 | 23.478 | 230 | 151 | 8 | 1 | 214 | 1 | 221 | 4.67e-14 | 71.2 |
| Msa1447530 | MtrunA17_Chr4g0014321 | 35.897 | 117 | 60 | 4 | 1 | 116 | 1 | 103 | 2.65e-13 | 68.9 |
| Msa1447530 | MtrunA17_Chr8g0379021 | 30.625 | 160 | 84 | 5 | 2 | 144 | 12 | 161 | 3.84e-12 | 64.7 |
| Msa1447530 | MtrunA17_Chr3g0107351 | 32.759 | 116 | 69 | 4 | 3 | 116 | 2 | 110 | 7.24e-12 | 63.5 |
| Msa1447530 | MtrunA17_Chr2g0284911 | 28.025 | 157 | 98 | 4 | 1 | 154 | 16 | 160 | 1.42e-11 | 64.7 |
| Msa1447530 | MtrunA17_Chr3g0107341 | 34.188 | 117 | 66 | 5 | 3 | 116 | 2 | 110 | 1.83e-11 | 62.4 |
| Msa1447530 | MtrunA17_Chr3g0107361 | 29.375 | 160 | 99 | 6 | 3 | 154 | 2 | 155 | 4.14e-11 | 61.2 |
| Msa1447530 | MtrunA17_Chr1g0197321 | 25.949 | 158 | 103 | 5 | 1 | 150 | 1 | 152 | 4.28e-11 | 61.2 |
| Msa1447530 | MtrunA17_Chr3g0110131 | 25.703 | 249 | 138 | 8 | 1 | 214 | 1 | 237 | 4.72e-11 | 62.8 |
| Msa1447530 | MtrunA17_Chr2g0283941 | 31.481 | 108 | 66 | 4 | 2 | 108 | 3 | 103 | 4.86e-11 | 62.8 |
| Msa1447530 | MtrunA17_Chr3g0107331 | 30.909 | 110 | 69 | 3 | 3 | 111 | 2 | 105 | 4.87e-11 | 60.8 |
| Msa1447530 | MtrunA17_Chr8g0380021 | 27.632 | 152 | 101 | 3 | 1 | 152 | 17 | 159 | 5.61e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1447530 | AT5G55690.1 | 39.310 | 145 | 80 | 2 | 1 | 144 | 1 | 138 | 8.70e-25 | 103 |
| Msa1447530 | AT5G55690.2 | 39.310 | 145 | 80 | 2 | 1 | 144 | 1 | 138 | 8.70e-25 | 103 |
| Msa1447530 | AT5G58890.1 | 30.380 | 158 | 105 | 3 | 6 | 160 | 6 | 161 | 9.12e-18 | 83.6 |
| Msa1447530 | AT3G18650.1 | 25.651 | 269 | 156 | 9 | 16 | 267 | 31 | 272 | 5.92e-15 | 76.6 |
| Msa1447530 | AT1G22590.2 | 29.677 | 155 | 98 | 3 | 1 | 150 | 1 | 149 | 1.00e-12 | 66.2 |
| Msa1447530 | AT1G65330.1 | 33.333 | 111 | 67 | 4 | 3 | 112 | 2 | 106 | 1.25e-12 | 68.2 |
| Msa1447530 | AT1G65300.1 | 33.636 | 110 | 64 | 4 | 5 | 112 | 4 | 106 | 1.49e-12 | 68.2 |
| Msa1447530 | AT3G05860.2 | 37.662 | 77 | 42 | 2 | 1 | 77 | 1 | 71 | 1.93e-12 | 66.6 |
| Msa1447530 | AT2G28700.1 | 26.842 | 190 | 117 | 7 | 1 | 182 | 1 | 176 | 1.99e-12 | 68.2 |
| Msa1447530 | AT3G05860.3 | 37.662 | 77 | 42 | 2 | 1 | 77 | 1 | 71 | 2.94e-12 | 66.6 |
| Msa1447530 | AT3G05860.1 | 37.662 | 77 | 42 | 2 | 1 | 77 | 1 | 71 | 3.37e-12 | 66.6 |
| Msa1447530 | AT5G23260.3 | 27.329 | 161 | 100 | 4 | 1 | 157 | 1 | 148 | 8.55e-12 | 65.1 |
| Msa1447530 | AT5G26650.1 | 32.174 | 115 | 67 | 4 | 5 | 116 | 3 | 109 | 1.39e-11 | 65.9 |
| Msa1447530 | AT5G13790.2 | 31.967 | 122 | 74 | 3 | 1 | 122 | 1 | 113 | 6.02e-11 | 63.2 |
| Msa1447530 | AT5G23260.1 | 26.901 | 171 | 97 | 5 | 1 | 157 | 17 | 173 | 6.49e-11 | 63.2 |
| Msa1447530 | AT5G27960.1 | 31.193 | 109 | 68 | 4 | 5 | 112 | 3 | 105 | 7.49e-11 | 63.5 |
| Msa1447530 | AT2G03060.3 | 23.864 | 176 | 119 | 5 | 1 | 173 | 1 | 164 | 7.74e-11 | 63.9 |
| Msa1447530 | AT2G03060.7 | 23.864 | 176 | 119 | 5 | 1 | 173 | 1 | 164 | 7.74e-11 | 63.9 |
| Msa1447530 | AT2G03060.1 | 23.864 | 176 | 119 | 5 | 1 | 173 | 1 | 164 | 7.74e-11 | 63.9 |
| Msa1447530 | AT2G40210.1 | 31.731 | 104 | 64 | 3 | 1 | 103 | 1 | 98 | 7.85e-11 | 63.9 |
| Msa1447530 | AT4G09960.5 | 27.215 | 158 | 98 | 5 | 1 | 154 | 11 | 155 | 8.25e-11 | 62.4 |
| Msa1447530 | AT4G09960.1 | 27.215 | 158 | 98 | 5 | 1 | 154 | 1 | 145 | 8.68e-11 | 62.0 |
| Msa1447530 | AT4G09960.6 | 27.215 | 158 | 98 | 5 | 1 | 154 | 2 | 146 | 8.88e-11 | 62.0 |
| Msa1447530 | AT2G03060.2 | 22.727 | 176 | 121 | 4 | 1 | 173 | 1 | 164 | 9.45e-11 | 63.5 |
Find 96 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCTTTCCATATTGATTT+TGG | 0.055519 | tig0031784:+20817 | None:intergenic |
| CCACATGGATTTCAACTTAA+TGG | 0.122963 | tig0031784:-20677 | Msa1447530:CDS |
| TTGTCTTTAGGCCATGTTTC+AGG | 0.191776 | tig0031784:+21481 | None:intergenic |
| TTGATGTTAATGGGGCTAAT+TGG | 0.199081 | tig0031784:-20904 | Msa1447530:CDS |
| AAATCCACGACCTACAAAAT+TGG | 0.234450 | tig0031784:+21510 | None:intergenic |
| TACAAGAATATTGATGTTAA+TGG | 0.237026 | tig0031784:-20914 | Msa1447530:CDS |
| GCATTTCCATTGTAATAGTA+TGG | 0.257144 | tig0031784:+20764 | None:intergenic |
| ACTTCCGTGATTTCTCCTTT+TGG | 0.266267 | tig0031784:+21626 | None:intergenic |
| TACTGCTACGCAACAAGTTC+TGG | 0.294127 | tig0031784:+19554 | None:intergenic |
| ACAAGAATATTGATGTTAAT+GGG | 0.303821 | tig0031784:-20913 | Msa1447530:CDS |
| AACAAGAGGATATGTCTATC+TGG | 0.312544 | tig0031784:-19492 | Msa1447530:CDS |
| GGTTATCAGGACCGATGCTT+CGG | 0.326389 | tig0031784:-20845 | Msa1447530:CDS |
| GATATTATTTGCTAGCAAAC+TGG | 0.357133 | tig0031784:-21260 | Msa1447530:CDS |
| AATGAATCTTTCAATTCTCT+TGG | 0.359377 | tig0031784:-21295 | Msa1447530:CDS |
| GGGTCGTGGAAGAATATCTA+TGG | 0.367126 | tig0031784:-21656 | Msa1447530:CDS |
| TGATGTTAATGGGGCTAATT+GGG | 0.367522 | tig0031784:-20903 | Msa1447530:CDS |
| ATTAACATCAATATTCTTGT+AGG | 0.368101 | tig0031784:+20916 | None:intergenic |
| TGGGGCTAATTGGGCCAATC+AGG | 0.372470 | tig0031784:-20894 | Msa1447530:CDS |
| AATGTTAATGATACCTATAA+TGG | 0.373254 | tig0031784:-20869 | Msa1447530:CDS |
| TCTTGAACATCATAGATCTT+AGG | 0.373714 | tig0031784:+21403 | None:intergenic |
| ATGTTAATGATACCTATAAT+GGG | 0.375349 | tig0031784:-20868 | Msa1447530:CDS |
| ATCATTAACATTAACCTGAT+TGG | 0.375551 | tig0031784:+20880 | None:intergenic |
| ATGGTGCGAGCTTTGTATAT+TGG | 0.377737 | tig0031784:+20976 | None:intergenic |
| CGGGCTTCCCAAAATCAATA+TGG | 0.380849 | tig0031784:-20825 | Msa1447530:CDS |
| GTTATCAGGACCGATGCTTC+GGG | 0.385864 | tig0031784:-20844 | Msa1447530:CDS |
| GGGAAAGTGTGCAAGGCAAT+AGG | 0.393610 | tig0031784:+20722 | None:intergenic |
| GATTTGAGAGATTCTGAAAA+GGG | 0.398612 | tig0031784:+20702 | None:intergenic |
| CTTGGGAATCTCACCTTAAG+AGG | 0.415136 | tig0031784:+19613 | None:intergenic |
| TATGCTAAAAGAAGATCATA+AGG | 0.417664 | tig0031784:-21203 | Msa1447530:CDS |
| GGTGTCTGCTACCCCTCTTA+AGG | 0.424800 | tig0031784:-19626 | Msa1447530:CDS |
| TTTCCAAGTGTCCACTCAAA+AGG | 0.425572 | tig0031784:-19587 | Msa1447530:CDS |
| AAGGAAGGATGGAGCTGAAA+AGG | 0.426747 | tig0031784:-20801 | Msa1447530:CDS |
| TTATCACTAATATTCATCAT+TGG | 0.435936 | tig0031784:+21061 | None:intergenic |
| AACATCAACATCACAAAGAA+TGG | 0.436469 | tig0031784:+21552 | None:intergenic |
| ATCCATTCCATTACTGTTGG+AGG | 0.440584 | tig0031784:-19515 | Msa1447530:CDS |
| ACTATAACACAACAAATGAT+AGG | 0.448494 | tig0031784:-21429 | Msa1447530:CDS |
| TTAACATCAATATTCTTGTA+GGG | 0.460944 | tig0031784:+20917 | None:intergenic |
| GTGGACACTTGGAAAAGTCT+TGG | 0.468552 | tig0031784:+19595 | None:intergenic |
| AATCCACGACCTACAAAATT+GGG | 0.470390 | tig0031784:+21511 | None:intergenic |
| TCTATCCATTCCATTACTGT+TGG | 0.473770 | tig0031784:-19518 | Msa1447530:CDS |
| GGAAAGTGTGCAAGGCAATA+GGG | 0.475843 | tig0031784:+20723 | None:intergenic |
| AGATTTGAGAGATTCTGAAA+AGG | 0.476219 | tig0031784:+20701 | None:intergenic |
| TAGTTTCTCTTTACGCACTT+TGG | 0.478267 | tig0031784:+21339 | None:intergenic |
| CAAGCTCATATGTTCATGAA+TGG | 0.478657 | tig0031784:-20632 | Msa1447530:CDS |
| ATCTATGGAACTCATCCAAA+AGG | 0.478947 | tig0031784:-21641 | Msa1447530:CDS |
| GAAGTAGTAACTAGGATTCA+AGG | 0.479038 | tig0031784:+21126 | None:intergenic |
| GAAGGTTGAGAGCTTTGTCC+CGG | 0.483719 | tig0031784:+21010 | None:intergenic |
| TTGAAAGATTCATTCCAAGT+TGG | 0.490806 | tig0031784:+21304 | None:intergenic |
| TGGACACTTGGAAAAGTCTT+GGG | 0.493815 | tig0031784:+19596 | None:intergenic |
| TCACTAATATTCATCATTGG+AGG | 0.494747 | tig0031784:+21064 | None:intergenic |
| ATCAATATGGAAAGGAAGGA+TGG | 0.505258 | tig0031784:-20812 | Msa1447530:CDS |
| CAAAATCAATATGGAAAGGA+AGG | 0.508161 | tig0031784:-20816 | Msa1447530:CDS |
| GTCAACATTTCAAAAGAGAA+AGG | 0.514992 | tig0031784:-21605 | Msa1447530:CDS |
| TTGAAGTGGCCAAAACCCTA+AGG | 0.517435 | tig0031784:+21033 | None:intergenic |
| TCTTGTTCCTCCAACAGTAA+TGG | 0.528355 | tig0031784:+19508 | None:intergenic |
| ACAAGAGGATATGTCTATCT+GGG | 0.536876 | tig0031784:-19491 | Msa1447530:CDS |
| CTCATATGTTCATGAATGGA+AGG | 0.537554 | tig0031784:-20628 | Msa1447530:CDS |
| TCGTCACCATACTATTACAA+TGG | 0.539170 | tig0031784:-20770 | Msa1447530:CDS |
| TTCCTCCAACAGTAATGGAA+TGG | 0.542058 | tig0031784:+19513 | None:intergenic |
| TAAAGATGATGTATCCAACT+TGG | 0.548629 | tig0031784:-21318 | Msa1447530:CDS |
| ATCTTTCAATTCTCTTGGAG+CGG | 0.552140 | tig0031784:-21290 | Msa1447530:CDS |
| ACTTAATGGATTCAATGCTA+AGG | 0.552446 | tig0031784:-20663 | Msa1447530:CDS |
| GGATATGTCTATCTGGGATG+AGG | 0.552655 | tig0031784:-19485 | Msa1447530:CDS |
| ATATTGGAAATCAAAGAAGA+AGG | 0.553651 | tig0031784:+20992 | None:intergenic |
| ATGCTAAAAGAAGATCATAA+GGG | 0.556585 | tig0031784:-21202 | Msa1447530:CDS |
| ACATTTCAAAAGAGAAAGGA+AGG | 0.560555 | tig0031784:-21601 | Msa1447530:CDS |
| GAGCTTTGTCCCGGTTGAAG+TGG | 0.560628 | tig0031784:+21019 | None:intergenic |
| ATGAGATTGAAGTAGTAACT+AGG | 0.569090 | tig0031784:+21118 | None:intergenic |
| ATTACTGTTGGAGGAACAAG+AGG | 0.569445 | tig0031784:-19506 | Msa1447530:CDS |
| TTGGGAATCTCACCTTAAGA+GGG | 0.571012 | tig0031784:+19614 | None:intergenic |
| TGAAGTGGCCAAAACCCTAA+GGG | 0.571128 | tig0031784:+21034 | None:intergenic |
| TATTCGTAGAAAATGGGTCG+TGG | 0.573273 | tig0031784:-21670 | None:intergenic |
| TTCCCAAAATCAATATGGAA+AGG | 0.576621 | tig0031784:-20820 | Msa1447530:CDS |
| CTCGCACCATGTGGAGTCTG+AGG | 0.578924 | tig0031784:-20963 | Msa1447530:CDS |
| TGTTAATGATACCTATAATG+GGG | 0.582350 | tig0031784:-20867 | Msa1447530:CDS |
| CACCATGTGGAGTCTGAGGA+GGG | 0.590680 | tig0031784:-20959 | Msa1447530:CDS |
| TAACATCAATATTCTTGTAG+GGG | 0.591713 | tig0031784:+20918 | None:intergenic |
| TCATCCAAAAGGAGAAATCA+CGG | 0.593512 | tig0031784:-21630 | Msa1447530:CDS |
| CTGAAAAGGGAAAGTGTGCA+AGG | 0.597692 | tig0031784:+20715 | None:intergenic |
| ATATGTTTGTGCTTGAGACA+TGG | 0.597890 | tig0031784:+21087 | None:intergenic |
| ATCTGGGATGAGGAGATGCA+TGG | 0.603930 | tig0031784:-19475 | Msa1447530:CDS |
| CAAGAATATTGATGTTAATG+GGG | 0.607609 | tig0031784:-20912 | Msa1447530:CDS |
| CTATTACAATGGAAATGCAA+TGG | 0.613734 | tig0031784:-20759 | Msa1447530:CDS |
| GCACCATGTGGAGTCTGAGG+AGG | 0.614956 | tig0031784:-20960 | Msa1447530:CDS |
| TACCCTCCTCAGACTCCACA+TGG | 0.630866 | tig0031784:+20957 | None:intergenic |
| GATTTGCTGAACCTGAAACA+TGG | 0.641427 | tig0031784:-21492 | Msa1447530:CDS |
| GAAGTGGCCAAAACCCTAAG+GGG | 0.646061 | tig0031784:+21035 | None:intergenic |
| TAGTAACTAGGATTCAAGGA+AGG | 0.647567 | tig0031784:+21130 | None:intergenic |
| GTTAATGATACCTATAATGG+GGG | 0.651079 | tig0031784:-20866 | Msa1447530:CDS |
| AGAGGGGTAGCAGACACCCA+AGG | 0.659168 | tig0031784:+19631 | None:intergenic |
| AATCTCTCAAATCTACCACA+TGG | 0.661283 | tig0031784:-20692 | Msa1447530:CDS |
| TATACAAAGCTCGCACCATG+TGG | 0.663687 | tig0031784:-20972 | Msa1447530:CDS |
| TGGGAATCTCACCTTAAGAG+GGG | 0.696658 | tig0031784:+19615 | None:intergenic |
| AATAGCTCATGAATCACACA+AGG | 0.705760 | tig0031784:-21173 | Msa1447530:CDS |
| ATGGCCTAAAGACAAAAGAG+AGG | 0.713382 | tig0031784:-21473 | Msa1447530:CDS |
| CCATTAAGTTGAAATCCATG+TGG | 0.755933 | tig0031784:+20677 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAACAAAAATTTCTTTTCT+TGG | - | tig0031784:20631-20650 | Msa1447530:CDS | 15.0% |
| !! | TAATACTAATATATAGATGA+GGG | - | tig0031784:20819-20838 | Msa1447530:CDS | 15.0% |
| !! | TTTGTTTCATAACATAAAAA+AGG | + | tig0031784:20856-20875 | None:intergenic | 15.0% |
| !!! | ATTTTGAAGAAATTAATGAT+AGG | - | tig0031784:20928-20947 | Msa1447530:CDS | 15.0% |
| !!! | TTTTGAAGAAATTAATGATA+GGG | - | tig0031784:20929-20948 | Msa1447530:CDS | 15.0% |
| !! | ATAAACTTGAAAATACAAAT+AGG | - | tig0031784:21274-21293 | Msa1447530:CDS | 15.0% |
| !! | TTTCTTAATTACAAGTAATT+TGG | - | tig0031784:21310-21329 | Msa1447530:CDS | 15.0% |
| !!! | TTAACAAAAATTTCTTTTCT+TGG | - | tig0031784:20631-20650 | Msa1447530:CDS | 15.0% |
| !! | TAATACTAATATATAGATGA+GGG | - | tig0031784:20819-20838 | Msa1447530:CDS | 15.0% |
| !! | TTTGTTTCATAACATAAAAA+AGG | + | tig0031784:20856-20875 | None:intergenic | 15.0% |
| !!! | ATTTTGAAGAAATTAATGAT+AGG | - | tig0031784:20928-20947 | Msa1447530:CDS | 15.0% |
| !!! | TTTTGAAGAAATTAATGATA+GGG | - | tig0031784:20929-20948 | Msa1447530:CDS | 15.0% |
| !! | ATAAACTTGAAAATACAAAT+AGG | - | tig0031784:21274-21293 | Msa1447530:CDS | 15.0% |
| !! | TTTCTTAATTACAAGTAATT+TGG | - | tig0031784:21310-21329 | Msa1447530:CDS | 15.0% |
| !! | TTATCACTAATATTCATCAT+TGG | + | tig0031784:20068-20087 | None:intergenic | 20.0% |
| !! | TTAACATCAATATTCTTGTA+GGG | + | tig0031784:20212-20231 | None:intergenic | 20.0% |
| !! | ATTAACATCAATATTCTTGT+AGG | + | tig0031784:20213-20232 | None:intergenic | 20.0% |
| !! | TACAAGAATATTGATGTTAA+TGG | - | tig0031784:20212-20231 | Msa1447530:intron | 20.0% |
| !! | ACAAGAATATTGATGTTAAT+GGG | - | tig0031784:20213-20232 | Msa1447530:intron | 20.0% |
| !! | AATGTTAATGATACCTATAA+TGG | - | tig0031784:20257-20276 | Msa1447530:intron | 20.0% |
| !! | ATGTTAATGATACCTATAAT+GGG | - | tig0031784:20258-20277 | Msa1447530:intron | 20.0% |
| !! | CTAATACTAATATATAGATG+AGG | - | tig0031784:20818-20837 | Msa1447530:CDS | 20.0% |
| !!! | CACTGATGTAATTTTTATAT+TGG | - | tig0031784:20880-20899 | Msa1447530:CDS | 20.0% |
| !! | AATATGACAAACTAAAATGT+TGG | + | tig0031784:21036-21055 | None:intergenic | 20.0% |
| !!! | AGTTATTATTCTAGGATTTA+AGG | + | tig0031784:21246-21265 | None:intergenic | 20.0% |
| !! | CATAACTAAGTTATTATTCT+AGG | + | tig0031784:21254-21273 | None:intergenic | 20.0% |
| !! | AACTATGGATATTTCTTATT+AGG | + | tig0031784:21348-21367 | None:intergenic | 20.0% |
| !! | AGTGACAATATTAATATTCA+TGG | - | tig0031784:21375-21394 | Msa1447530:CDS | 20.0% |
| !! | TTATCACTAATATTCATCAT+TGG | + | tig0031784:20068-20087 | None:intergenic | 20.0% |
| !! | TTAACATCAATATTCTTGTA+GGG | + | tig0031784:20212-20231 | None:intergenic | 20.0% |
| !! | ATTAACATCAATATTCTTGT+AGG | + | tig0031784:20213-20232 | None:intergenic | 20.0% |
| !! | TACAAGAATATTGATGTTAA+TGG | - | tig0031784:20212-20231 | Msa1447530:intron | 20.0% |
| !! | ACAAGAATATTGATGTTAAT+GGG | - | tig0031784:20213-20232 | Msa1447530:intron | 20.0% |
| !! | AATGTTAATGATACCTATAA+TGG | - | tig0031784:20257-20276 | Msa1447530:intron | 20.0% |
| !! | ATGTTAATGATACCTATAAT+GGG | - | tig0031784:20258-20277 | Msa1447530:intron | 20.0% |
| !! | CTAATACTAATATATAGATG+AGG | - | tig0031784:20818-20837 | Msa1447530:CDS | 20.0% |
| !!! | CACTGATGTAATTTTTATAT+TGG | - | tig0031784:20880-20899 | Msa1447530:CDS | 20.0% |
| !! | AATATGACAAACTAAAATGT+TGG | + | tig0031784:21036-21055 | None:intergenic | 20.0% |
| !!! | AGTTATTATTCTAGGATTTA+AGG | + | tig0031784:21246-21265 | None:intergenic | 20.0% |
| !! | CATAACTAAGTTATTATTCT+AGG | + | tig0031784:21254-21273 | None:intergenic | 20.0% |
| !! | AACTATGGATATTTCTTATT+AGG | + | tig0031784:21348-21367 | None:intergenic | 20.0% |
| !! | AGTGACAATATTAATATTCA+TGG | - | tig0031784:21375-21394 | Msa1447530:CDS | 20.0% |
| !! | TTGTGTTATAGTACTTTTGA+AGG | + | tig0031784:19689-19708 | None:intergenic | 25.0% |
| ! | ACTATAACACAACAAATGAT+AGG | - | tig0031784:19697-19716 | Msa1447530:intron | 25.0% |
| !!! | TGATGTTCAAGAGTATTTTA+AGG | - | tig0031784:19734-19753 | Msa1447530:intron | 25.0% |
| !!! | TTCAAGAGTATTTTAAGGAA+AGG | - | tig0031784:19739-19758 | Msa1447530:intron | 25.0% |
| ! | AATGAATCTTTCAATTCTCT+TGG | - | tig0031784:19831-19850 | Msa1447530:intron | 25.0% |
| ! | TATGCTAAAAGAAGATCATA+AGG | - | tig0031784:19923-19942 | Msa1447530:intron | 25.0% |
| ! | ATGCTAAAAGAAGATCATAA+GGG | - | tig0031784:19924-19943 | Msa1447530:intron | 25.0% |
| ! | ATATTGGAAATCAAAGAAGA+AGG | + | tig0031784:20137-20156 | None:intergenic | 25.0% |
| ! | TAACATCAATATTCTTGTAG+GGG | + | tig0031784:20211-20230 | None:intergenic | 25.0% |
| ! | CAAGAATATTGATGTTAATG+GGG | - | tig0031784:20214-20233 | Msa1447530:intron | 25.0% |
| ! | ATCATTAACATTAACCTGAT+TGG | + | tig0031784:20249-20268 | None:intergenic | 25.0% |
| ! | TGTTAATGATACCTATAATG+GGG | - | tig0031784:20259-20278 | Msa1447530:intron | 25.0% |
| !!! | TTCCTTTCCATATTGATTTT+GGG | + | tig0031784:20311-20330 | None:intergenic | 25.0% |
| ! | TGGTGCTTATTATATATTTC+TGG | - | tig0031784:20676-20695 | Msa1447530:CDS | 25.0% |
| ! | GGTGCTTATTATATATTTCT+GGG | - | tig0031784:20677-20696 | Msa1447530:CDS | 25.0% |
| ! | TGGATATTTCTTATTAGGTA+GGG | + | tig0031784:21343-21362 | None:intergenic | 25.0% |
| ! | ATGGATATTTCTTATTAGGT+AGG | + | tig0031784:21344-21363 | None:intergenic | 25.0% |
| !! | TTGTCACTTCAAAATAACTA+TGG | + | tig0031784:21363-21382 | None:intergenic | 25.0% |
| !! | ATTTTTCACTGAGTATTACT+AGG | - | tig0031784:21437-21456 | Msa1447530:CDS | 25.0% |
| !! | TTGTGTTATAGTACTTTTGA+AGG | + | tig0031784:19689-19708 | None:intergenic | 25.0% |
| ! | ACTATAACACAACAAATGAT+AGG | - | tig0031784:19697-19716 | Msa1447530:intron | 25.0% |
| !!! | TGATGTTCAAGAGTATTTTA+AGG | - | tig0031784:19734-19753 | Msa1447530:intron | 25.0% |
| !!! | TTCAAGAGTATTTTAAGGAA+AGG | - | tig0031784:19739-19758 | Msa1447530:intron | 25.0% |
| ! | AATGAATCTTTCAATTCTCT+TGG | - | tig0031784:19831-19850 | Msa1447530:intron | 25.0% |
| ! | TATGCTAAAAGAAGATCATA+AGG | - | tig0031784:19923-19942 | Msa1447530:intron | 25.0% |
| ! | ATGCTAAAAGAAGATCATAA+GGG | - | tig0031784:19924-19943 | Msa1447530:intron | 25.0% |
| ! | ATATTGGAAATCAAAGAAGA+AGG | + | tig0031784:20137-20156 | None:intergenic | 25.0% |
| ! | TAACATCAATATTCTTGTAG+GGG | + | tig0031784:20211-20230 | None:intergenic | 25.0% |
| ! | CAAGAATATTGATGTTAATG+GGG | - | tig0031784:20214-20233 | Msa1447530:intron | 25.0% |
| ! | ATCATTAACATTAACCTGAT+TGG | + | tig0031784:20249-20268 | None:intergenic | 25.0% |
| ! | TGTTAATGATACCTATAATG+GGG | - | tig0031784:20259-20278 | Msa1447530:intron | 25.0% |
| !!! | TTCCTTTCCATATTGATTTT+GGG | + | tig0031784:20311-20330 | None:intergenic | 25.0% |
| ! | TGGTGCTTATTATATATTTC+TGG | - | tig0031784:20676-20695 | Msa1447530:CDS | 25.0% |
| ! | GGTGCTTATTATATATTTCT+GGG | - | tig0031784:20677-20696 | Msa1447530:CDS | 25.0% |
| ! | TGGATATTTCTTATTAGGTA+GGG | + | tig0031784:21343-21362 | None:intergenic | 25.0% |
| ! | ATGGATATTTCTTATTAGGT+AGG | + | tig0031784:21344-21363 | None:intergenic | 25.0% |
| !! | TTGTCACTTCAAAATAACTA+TGG | + | tig0031784:21363-21382 | None:intergenic | 25.0% |
| !! | ATTTTTCACTGAGTATTACT+AGG | - | tig0031784:21437-21456 | Msa1447530:CDS | 25.0% |
| GTCAACATTTCAAAAGAGAA+AGG | - | tig0031784:19521-19540 | Msa1447530:CDS | 30.0% | |
| ACATTTCAAAAGAGAAAGGA+AGG | - | tig0031784:19525-19544 | Msa1447530:CDS | 30.0% | |
| AACATCAACATCACAAAGAA+TGG | + | tig0031784:19577-19596 | None:intergenic | 30.0% | |
| TCTTGAACATCATAGATCTT+AGG | + | tig0031784:19726-19745 | None:intergenic | 30.0% | |
| TAAAGATGATGTATCCAACT+TGG | - | tig0031784:19808-19827 | Msa1447530:intron | 30.0% | |
| TTGAAAGATTCATTCCAAGT+TGG | + | tig0031784:19825-19844 | None:intergenic | 30.0% | |
| ! | GATATTATTTGCTAGCAAAC+TGG | - | tig0031784:19866-19885 | Msa1447530:intron | 30.0% |
| ATGAGATTGAAGTAGTAACT+AGG | + | tig0031784:20011-20030 | None:intergenic | 30.0% | |
| TCACTAATATTCATCATTGG+AGG | + | tig0031784:20065-20084 | None:intergenic | 30.0% | |
| ATTAGTGATAAAAACCCCTT+AGG | - | tig0031784:20077-20096 | Msa1447530:intron | 30.0% | |
| TTAGTGATAAAAACCCCTTA+GGG | - | tig0031784:20078-20097 | Msa1447530:intron | 30.0% | |
| GTTAATGATACCTATAATGG+GGG | - | tig0031784:20260-20279 | Msa1447530:intron | 30.0% | |
| TTCCCAAAATCAATATGGAA+AGG | - | tig0031784:20306-20325 | Msa1447530:intron | 30.0% | |
| !!! | CTTCCTTTCCATATTGATTT+TGG | + | tig0031784:20312-20331 | None:intergenic | 30.0% |
| CAAAATCAATATGGAAAGGA+AGG | - | tig0031784:20310-20329 | Msa1447530:intron | 30.0% | |
| GCATTTCCATTGTAATAGTA+TGG | + | tig0031784:20365-20384 | None:intergenic | 30.0% | |
| CTATTACAATGGAAATGCAA+TGG | - | tig0031784:20367-20386 | Msa1447530:intron | 30.0% | |
| ! | GATTTGAGAGATTCTGAAAA+GGG | + | tig0031784:20427-20446 | None:intergenic | 30.0% |
| ! | AGATTTGAGAGATTCTGAAA+AGG | + | tig0031784:20428-20447 | None:intergenic | 30.0% |
| !! | ACTTAATGGATTCAATGCTA+AGG | - | tig0031784:20463-20482 | Msa1447530:intron | 30.0% |
| TTTAAGTCGAACAAATAGCT+TGG | - | tig0031784:20656-20675 | Msa1447530:CDS | 30.0% | |
| AGAAATTAATGATAGGGAGA+TGG | - | tig0031784:20935-20954 | Msa1447530:CDS | 30.0% | |
| ATAAACTTCCTCAATTTCGT+CGG | - | tig0031784:21087-21106 | Msa1447530:CDS | 30.0% | |
| AATTTCGTCGGAAATAGAAA+AGG | - | tig0031784:21099-21118 | Msa1447530:CDS | 30.0% | |
| AGATAAGGACTACCAATATA+TGG | + | tig0031784:21223-21242 | None:intergenic | 30.0% | |
| !! | TTCTAGGATTTAAGGAGATA+AGG | + | tig0031784:21238-21257 | None:intergenic | 30.0% |
| TTTCTTATTAGGTAGGGTAA+AGG | + | tig0031784:21337-21356 | None:intergenic | 30.0% | |
| GTCAACATTTCAAAAGAGAA+AGG | - | tig0031784:19521-19540 | Msa1447530:CDS | 30.0% | |
| ACATTTCAAAAGAGAAAGGA+AGG | - | tig0031784:19525-19544 | Msa1447530:CDS | 30.0% | |
| AACATCAACATCACAAAGAA+TGG | + | tig0031784:19577-19596 | None:intergenic | 30.0% | |
| TCTTGAACATCATAGATCTT+AGG | + | tig0031784:19726-19745 | None:intergenic | 30.0% | |
| TAAAGATGATGTATCCAACT+TGG | - | tig0031784:19808-19827 | Msa1447530:intron | 30.0% | |
| TTGAAAGATTCATTCCAAGT+TGG | + | tig0031784:19825-19844 | None:intergenic | 30.0% | |
| ! | GATATTATTTGCTAGCAAAC+TGG | - | tig0031784:19866-19885 | Msa1447530:intron | 30.0% |
| ATGAGATTGAAGTAGTAACT+AGG | + | tig0031784:20011-20030 | None:intergenic | 30.0% | |
| TCACTAATATTCATCATTGG+AGG | + | tig0031784:20065-20084 | None:intergenic | 30.0% | |
| ATTAGTGATAAAAACCCCTT+AGG | - | tig0031784:20077-20096 | Msa1447530:intron | 30.0% | |
| TTAGTGATAAAAACCCCTTA+GGG | - | tig0031784:20078-20097 | Msa1447530:intron | 30.0% | |
| GTTAATGATACCTATAATGG+GGG | - | tig0031784:20260-20279 | Msa1447530:intron | 30.0% | |
| TTCCCAAAATCAATATGGAA+AGG | - | tig0031784:20306-20325 | Msa1447530:intron | 30.0% | |
| !!! | CTTCCTTTCCATATTGATTT+TGG | + | tig0031784:20312-20331 | None:intergenic | 30.0% |
| CAAAATCAATATGGAAAGGA+AGG | - | tig0031784:20310-20329 | Msa1447530:intron | 30.0% | |
| GCATTTCCATTGTAATAGTA+TGG | + | tig0031784:20365-20384 | None:intergenic | 30.0% | |
| CTATTACAATGGAAATGCAA+TGG | - | tig0031784:20367-20386 | Msa1447530:intron | 30.0% | |
| ! | GATTTGAGAGATTCTGAAAA+GGG | + | tig0031784:20427-20446 | None:intergenic | 30.0% |
| ! | AGATTTGAGAGATTCTGAAA+AGG | + | tig0031784:20428-20447 | None:intergenic | 30.0% |
| !! | ACTTAATGGATTCAATGCTA+AGG | - | tig0031784:20463-20482 | Msa1447530:intron | 30.0% |
| TTTAAGTCGAACAAATAGCT+TGG | - | tig0031784:20656-20675 | Msa1447530:CDS | 30.0% | |
| AGAAATTAATGATAGGGAGA+TGG | - | tig0031784:20935-20954 | Msa1447530:CDS | 30.0% | |
| ATAAACTTCCTCAATTTCGT+CGG | - | tig0031784:21087-21106 | Msa1447530:CDS | 30.0% | |
| AATTTCGTCGGAAATAGAAA+AGG | - | tig0031784:21099-21118 | Msa1447530:CDS | 30.0% | |
| AGATAAGGACTACCAATATA+TGG | + | tig0031784:21223-21242 | None:intergenic | 30.0% | |
| !! | TTCTAGGATTTAAGGAGATA+AGG | + | tig0031784:21238-21257 | None:intergenic | 30.0% |
| TTTCTTATTAGGTAGGGTAA+AGG | + | tig0031784:21337-21356 | None:intergenic | 30.0% | |
| ATCTATGGAACTCATCCAAA+AGG | - | tig0031784:19485-19504 | Msa1447530:CDS | 35.0% | |
| TCATCCAAAAGGAGAAATCA+CGG | - | tig0031784:19496-19515 | Msa1447530:CDS | 35.0% | |
| AATCCACGACCTACAAAATT+GGG | + | tig0031784:19618-19637 | None:intergenic | 35.0% | |
| AAATCCACGACCTACAAAAT+TGG | + | tig0031784:19619-19638 | None:intergenic | 35.0% | |
| ! | TGTACCTCTCTTTTGTCTTT+AGG | + | tig0031784:19660-19679 | None:intergenic | 35.0% |
| TAGTTTCTCTTTACGCACTT+TGG | + | tig0031784:19790-19809 | None:intergenic | 35.0% | |
| ATCTTTCAATTCTCTTGGAG+CGG | - | tig0031784:19836-19855 | Msa1447530:intron | 35.0% | |
| AATAGCTCATGAATCACACA+AGG | - | tig0031784:19953-19972 | Msa1447530:intron | 35.0% | |
| TAGTAACTAGGATTCAAGGA+AGG | + | tig0031784:19999-20018 | None:intergenic | 35.0% | |
| GAAGTAGTAACTAGGATTCA+AGG | + | tig0031784:20003-20022 | None:intergenic | 35.0% | |
| ATATGTTTGTGCTTGAGACA+TGG | + | tig0031784:20042-20061 | None:intergenic | 35.0% | |
| ! | ATAAAAACCCCTTAGGGTTT+TGG | - | tig0031784:20084-20103 | Msa1447530:intron | 35.0% |
| TTGATGTTAATGGGGCTAAT+TGG | - | tig0031784:20222-20241 | Msa1447530:intron | 35.0% | |
| TGATGTTAATGGGGCTAATT+GGG | - | tig0031784:20223-20242 | Msa1447530:intron | 35.0% | |
| ATCAATATGGAAAGGAAGGA+TGG | - | tig0031784:20314-20333 | Msa1447530:intron | 35.0% | |
| TCGTCACCATACTATTACAA+TGG | - | tig0031784:20356-20375 | Msa1447530:intron | 35.0% | |
| AATCTCTCAAATCTACCACA+TGG | - | tig0031784:20434-20453 | Msa1447530:intron | 35.0% | |
| !! | CCATTAAGTTGAAATCCATG+TGG | + | tig0031784:20452-20471 | None:intergenic | 35.0% |
| CCACATGGATTTCAACTTAA+TGG | - | tig0031784:20449-20468 | Msa1447530:intron | 35.0% | |
| CAAGCTCATATGTTCATGAA+TGG | - | tig0031784:20494-20513 | Msa1447530:intron | 35.0% | |
| CTCATATGTTCATGAATGGA+AGG | - | tig0031784:20498-20517 | Msa1447530:intron | 35.0% | |
| GCATAACACTTTGAACTTTC+AGG | - | tig0031784:20528-20547 | Msa1447530:intron | 35.0% | |
| AATTAATGATAGGGAGATGG+TGG | - | tig0031784:20938-20957 | Msa1447530:CDS | 35.0% | |
| TTCTATTTCCGACGAAATTG+AGG | + | tig0031784:21098-21117 | None:intergenic | 35.0% | |
| ! | TTTTTCTTTTACGCGAGAGT+TGG | - | tig0031784:21144-21163 | Msa1447530:CDS | 35.0% |
| !! | CAATATATGGTTGGTTCGAA+TGG | + | tig0031784:21210-21229 | None:intergenic | 35.0% |
| CATTCGAACCAACCATATAT+TGG | - | tig0031784:21208-21227 | Msa1447530:CDS | 35.0% | |
| AAGGACTACCAATATATGGT+TGG | + | tig0031784:21219-21238 | None:intergenic | 35.0% | |
| TTCACTGAGTATTACTAGGT+AGG | - | tig0031784:21441-21460 | Msa1447530:CDS | 35.0% | |
| TAGGTAGGTTAAGAATGTGA+GGG | - | tig0031784:21456-21475 | Msa1447530:CDS | 35.0% | |
| ! | AAGAATGTGAGGGACTTTTT+AGG | - | tig0031784:21466-21485 | Msa1447530:CDS | 35.0% |
| !!! | ACTTTTTAGGTGTGATCCTT+GGG | - | tig0031784:21479-21498 | Msa1447530:CDS | 35.0% |
| ! | GATTTTTGCTTCCTTTTGAG+TGG | + | tig0031784:21553-21572 | None:intergenic | 35.0% |
| TCTATCCATTCCATTACTGT+TGG | - | tig0031784:21608-21627 | Msa1447530:CDS | 35.0% | |
| AACAAGAGGATATGTCTATC+TGG | - | tig0031784:21634-21653 | Msa1447530:CDS | 35.0% | |
| ACAAGAGGATATGTCTATCT+GGG | - | tig0031784:21635-21654 | Msa1447530:CDS | 35.0% | |
| ATCTATGGAACTCATCCAAA+AGG | - | tig0031784:19485-19504 | Msa1447530:CDS | 35.0% | |
| TCATCCAAAAGGAGAAATCA+CGG | - | tig0031784:19496-19515 | Msa1447530:CDS | 35.0% | |
| AATCCACGACCTACAAAATT+GGG | + | tig0031784:19618-19637 | None:intergenic | 35.0% | |
| AAATCCACGACCTACAAAAT+TGG | + | tig0031784:19619-19638 | None:intergenic | 35.0% | |
| ! | TGTACCTCTCTTTTGTCTTT+AGG | + | tig0031784:19660-19679 | None:intergenic | 35.0% |
| TAGTTTCTCTTTACGCACTT+TGG | + | tig0031784:19790-19809 | None:intergenic | 35.0% | |
| ATCTTTCAATTCTCTTGGAG+CGG | - | tig0031784:19836-19855 | Msa1447530:intron | 35.0% | |
| AATAGCTCATGAATCACACA+AGG | - | tig0031784:19953-19972 | Msa1447530:intron | 35.0% | |
| TAGTAACTAGGATTCAAGGA+AGG | + | tig0031784:19999-20018 | None:intergenic | 35.0% | |
| GAAGTAGTAACTAGGATTCA+AGG | + | tig0031784:20003-20022 | None:intergenic | 35.0% | |
| ATATGTTTGTGCTTGAGACA+TGG | + | tig0031784:20042-20061 | None:intergenic | 35.0% | |
| ! | ATAAAAACCCCTTAGGGTTT+TGG | - | tig0031784:20084-20103 | Msa1447530:intron | 35.0% |
| TTGATGTTAATGGGGCTAAT+TGG | - | tig0031784:20222-20241 | Msa1447530:intron | 35.0% | |
| TGATGTTAATGGGGCTAATT+GGG | - | tig0031784:20223-20242 | Msa1447530:intron | 35.0% | |
| ATCAATATGGAAAGGAAGGA+TGG | - | tig0031784:20314-20333 | Msa1447530:intron | 35.0% | |
| TCGTCACCATACTATTACAA+TGG | - | tig0031784:20356-20375 | Msa1447530:intron | 35.0% | |
| AATCTCTCAAATCTACCACA+TGG | - | tig0031784:20434-20453 | Msa1447530:intron | 35.0% | |
| !! | CCATTAAGTTGAAATCCATG+TGG | + | tig0031784:20452-20471 | None:intergenic | 35.0% |
| CCACATGGATTTCAACTTAA+TGG | - | tig0031784:20449-20468 | Msa1447530:intron | 35.0% | |
| CAAGCTCATATGTTCATGAA+TGG | - | tig0031784:20494-20513 | Msa1447530:intron | 35.0% | |
| CTCATATGTTCATGAATGGA+AGG | - | tig0031784:20498-20517 | Msa1447530:intron | 35.0% | |
| GCATAACACTTTGAACTTTC+AGG | - | tig0031784:20528-20547 | Msa1447530:intron | 35.0% | |
| AATTAATGATAGGGAGATGG+TGG | - | tig0031784:20938-20957 | Msa1447530:CDS | 35.0% | |
| TTCTATTTCCGACGAAATTG+AGG | + | tig0031784:21098-21117 | None:intergenic | 35.0% | |
| ! | TTTTTCTTTTACGCGAGAGT+TGG | - | tig0031784:21144-21163 | Msa1447530:CDS | 35.0% |
| !! | CAATATATGGTTGGTTCGAA+TGG | + | tig0031784:21210-21229 | None:intergenic | 35.0% |
| CATTCGAACCAACCATATAT+TGG | - | tig0031784:21208-21227 | Msa1447530:CDS | 35.0% | |
| AAGGACTACCAATATATGGT+TGG | + | tig0031784:21219-21238 | None:intergenic | 35.0% | |
| TTCACTGAGTATTACTAGGT+AGG | - | tig0031784:21441-21460 | Msa1447530:CDS | 35.0% | |
| TAGGTAGGTTAAGAATGTGA+GGG | - | tig0031784:21456-21475 | Msa1447530:CDS | 35.0% | |
| ! | AAGAATGTGAGGGACTTTTT+AGG | - | tig0031784:21466-21485 | Msa1447530:CDS | 35.0% |
| !!! | ACTTTTTAGGTGTGATCCTT+GGG | - | tig0031784:21479-21498 | Msa1447530:CDS | 35.0% |
| ! | GATTTTTGCTTCCTTTTGAG+TGG | + | tig0031784:21553-21572 | None:intergenic | 35.0% |
| TCTATCCATTCCATTACTGT+TGG | - | tig0031784:21608-21627 | Msa1447530:CDS | 35.0% | |
| AACAAGAGGATATGTCTATC+TGG | - | tig0031784:21634-21653 | Msa1447530:CDS | 35.0% | |
| ACAAGAGGATATGTCTATCT+GGG | - | tig0031784:21635-21654 | Msa1447530:CDS | 35.0% | |
| ! | ACTTCCGTGATTTCTCCTTT+TGG | + | tig0031784:19503-19522 | None:intergenic | 40.0% |
| ! | CTCTATGCTCCCAATTTTGT+AGG | - | tig0031784:19606-19625 | Msa1447530:CDS | 40.0% |
| !! | GATTTGCTGAACCTGAAACA+TGG | - | tig0031784:19634-19653 | Msa1447530:CDS | 40.0% |
| TTGTCTTTAGGCCATGTTTC+AGG | + | tig0031784:19648-19667 | None:intergenic | 40.0% | |
| ATGGCCTAAAGACAAAAGAG+AGG | - | tig0031784:19653-19672 | Msa1447530:intron | 40.0% | |
| ! | ATGGTGCGAGCTTTGTATAT+TGG | + | tig0031784:20153-20172 | None:intergenic | 40.0% |
| ! | TACCTATAATGGGGGTTATC+AGG | - | tig0031784:20268-20287 | Msa1447530:intron | 40.0% |
| AGGAATTAGTTCACCGCTAT+TGG | + | tig0031784:21185-21204 | None:intergenic | 40.0% | |
| !! | TATGGTTGGTTCGAATGGTA+AGG | + | tig0031784:21205-21224 | None:intergenic | 40.0% |
| CTAGGTAGGTTAAGAATGTG+AGG | - | tig0031784:21455-21474 | Msa1447530:CDS | 40.0% | |
| !!! | GACTTTTTAGGTGTGATCCT+TGG | - | tig0031784:21478-21497 | Msa1447530:CDS | 40.0% |
| TTGGGAATCTCACCTTAAGA+GGG | + | tig0031784:21515-21534 | None:intergenic | 40.0% | |
| TGGACACTTGGAAAAGTCTT+GGG | + | tig0031784:21533-21552 | None:intergenic | 40.0% | |
| TTTCCAAGTGTCCACTCAAA+AGG | - | tig0031784:21539-21558 | Msa1447530:CDS | 40.0% | |
| ATCCATTCCATTACTGTTGG+AGG | - | tig0031784:21611-21630 | Msa1447530:CDS | 40.0% | |
| ! | TTCCTCCAACAGTAATGGAA+TGG | + | tig0031784:21616-21635 | None:intergenic | 40.0% |
| TCTTGTTCCTCCAACAGTAA+TGG | + | tig0031784:21621-21640 | None:intergenic | 40.0% | |
| ATTACTGTTGGAGGAACAAG+AGG | - | tig0031784:21620-21639 | Msa1447530:CDS | 40.0% | |
| ! | ACTTCCGTGATTTCTCCTTT+TGG | + | tig0031784:19503-19522 | None:intergenic | 40.0% |
| ! | CTCTATGCTCCCAATTTTGT+AGG | - | tig0031784:19606-19625 | Msa1447530:CDS | 40.0% |
| !! | GATTTGCTGAACCTGAAACA+TGG | - | tig0031784:19634-19653 | Msa1447530:CDS | 40.0% |
| TTGTCTTTAGGCCATGTTTC+AGG | + | tig0031784:19648-19667 | None:intergenic | 40.0% | |
| ATGGCCTAAAGACAAAAGAG+AGG | - | tig0031784:19653-19672 | Msa1447530:intron | 40.0% | |
| ! | ATGGTGCGAGCTTTGTATAT+TGG | + | tig0031784:20153-20172 | None:intergenic | 40.0% |
| ! | TACCTATAATGGGGGTTATC+AGG | - | tig0031784:20268-20287 | Msa1447530:intron | 40.0% |
| AGGAATTAGTTCACCGCTAT+TGG | + | tig0031784:21185-21204 | None:intergenic | 40.0% | |
| !! | TATGGTTGGTTCGAATGGTA+AGG | + | tig0031784:21205-21224 | None:intergenic | 40.0% |
| CTAGGTAGGTTAAGAATGTG+AGG | - | tig0031784:21455-21474 | Msa1447530:CDS | 40.0% | |
| !!! | GACTTTTTAGGTGTGATCCT+TGG | - | tig0031784:21478-21497 | Msa1447530:CDS | 40.0% |
| TTGGGAATCTCACCTTAAGA+GGG | + | tig0031784:21515-21534 | None:intergenic | 40.0% | |
| TGGACACTTGGAAAAGTCTT+GGG | + | tig0031784:21533-21552 | None:intergenic | 40.0% | |
| TTTCCAAGTGTCCACTCAAA+AGG | - | tig0031784:21539-21558 | Msa1447530:CDS | 40.0% | |
| ATCCATTCCATTACTGTTGG+AGG | - | tig0031784:21611-21630 | Msa1447530:CDS | 40.0% | |
| ! | TTCCTCCAACAGTAATGGAA+TGG | + | tig0031784:21616-21635 | None:intergenic | 40.0% |
| TCTTGTTCCTCCAACAGTAA+TGG | + | tig0031784:21621-21640 | None:intergenic | 40.0% | |
| ATTACTGTTGGAGGAACAAG+AGG | - | tig0031784:21620-21639 | Msa1447530:CDS | 40.0% | |
| GGGTCGTGGAAGAATATCTA+TGG | - | tig0031784:19470-19489 | Msa1447530:CDS | 45.0% | |
| TGAAGTGGCCAAAACCCTAA+GGG | + | tig0031784:20095-20114 | None:intergenic | 45.0% | |
| TTGAAGTGGCCAAAACCCTA+AGG | + | tig0031784:20096-20115 | None:intergenic | 45.0% | |
| TATACAAAGCTCGCACCATG+TGG | - | tig0031784:20154-20173 | Msa1447530:intron | 45.0% | |
| GTCCTGATAACCCCCATTAT+AGG | + | tig0031784:20273-20292 | None:intergenic | 45.0% | |
| CGGGCTTCCCAAAATCAATA+TGG | - | tig0031784:20301-20320 | Msa1447530:intron | 45.0% | |
| AAGGAAGGATGGAGCTGAAA+AGG | - | tig0031784:20325-20344 | Msa1447530:intron | 45.0% | |
| ! | GGAAAGTGTGCAAGGCAATA+GGG | + | tig0031784:20406-20425 | None:intergenic | 45.0% |
| ! | CTGAAAAGGGAAAGTGTGCA+AGG | + | tig0031784:20414-20433 | None:intergenic | 45.0% |
| ATCGAGCTCATGACCAATAG+CGG | - | tig0031784:21169-21188 | Msa1447530:CDS | 45.0% | |
| TGGGAATCTCACCTTAAGAG+GGG | + | tig0031784:21514-21533 | None:intergenic | 45.0% | |
| CTTGGGAATCTCACCTTAAG+AGG | + | tig0031784:21516-21535 | None:intergenic | 45.0% | |
| GTGGACACTTGGAAAAGTCT+TGG | + | tig0031784:21534-21553 | None:intergenic | 45.0% | |
| !! | CTTCCTTTTGAGTGGACACT+TGG | + | tig0031784:21545-21564 | None:intergenic | 45.0% |
| TACTGCTACGCAACAAGTTC+TGG | + | tig0031784:21575-21594 | None:intergenic | 45.0% | |
| ! | GGATATGTCTATCTGGGATG+AGG | - | tig0031784:21641-21660 | Msa1447530:CDS | 45.0% |
| GGGTCGTGGAAGAATATCTA+TGG | - | tig0031784:19470-19489 | Msa1447530:CDS | 45.0% | |
| TGAAGTGGCCAAAACCCTAA+GGG | + | tig0031784:20095-20114 | None:intergenic | 45.0% | |
| TTGAAGTGGCCAAAACCCTA+AGG | + | tig0031784:20096-20115 | None:intergenic | 45.0% | |
| TATACAAAGCTCGCACCATG+TGG | - | tig0031784:20154-20173 | Msa1447530:intron | 45.0% | |
| GTCCTGATAACCCCCATTAT+AGG | + | tig0031784:20273-20292 | None:intergenic | 45.0% | |
| CGGGCTTCCCAAAATCAATA+TGG | - | tig0031784:20301-20320 | Msa1447530:intron | 45.0% | |
| AAGGAAGGATGGAGCTGAAA+AGG | - | tig0031784:20325-20344 | Msa1447530:intron | 45.0% | |
| ! | GGAAAGTGTGCAAGGCAATA+GGG | + | tig0031784:20406-20425 | None:intergenic | 45.0% |
| ! | CTGAAAAGGGAAAGTGTGCA+AGG | + | tig0031784:20414-20433 | None:intergenic | 45.0% |
| ATCGAGCTCATGACCAATAG+CGG | - | tig0031784:21169-21188 | Msa1447530:CDS | 45.0% | |
| TGGGAATCTCACCTTAAGAG+GGG | + | tig0031784:21514-21533 | None:intergenic | 45.0% | |
| CTTGGGAATCTCACCTTAAG+AGG | + | tig0031784:21516-21535 | None:intergenic | 45.0% | |
| GTGGACACTTGGAAAAGTCT+TGG | + | tig0031784:21534-21553 | None:intergenic | 45.0% | |
| !! | CTTCCTTTTGAGTGGACACT+TGG | + | tig0031784:21545-21564 | None:intergenic | 45.0% |
| TACTGCTACGCAACAAGTTC+TGG | + | tig0031784:21575-21594 | None:intergenic | 45.0% | |
| ! | GGATATGTCTATCTGGGATG+AGG | - | tig0031784:21641-21660 | Msa1447530:CDS | 45.0% |
| ! | GCTCCCAATTTTGTAGGTCG+TGG | - | tig0031784:19612-19631 | Msa1447530:CDS | 50.0% |
| GAAGTGGCCAAAACCCTAAG+GGG | + | tig0031784:20094-20113 | None:intergenic | 50.0% | |
| !! | AGGGTTTTGGCCACTTCAAC+CGG | - | tig0031784:20097-20116 | Msa1447530:intron | 50.0% |
| ! | GAAGGTTGAGAGCTTTGTCC+CGG | + | tig0031784:20119-20138 | None:intergenic | 50.0% |
| GGTTATCAGGACCGATGCTT+CGG | - | tig0031784:20281-20300 | Msa1447530:intron | 50.0% | |
| GTTATCAGGACCGATGCTTC+GGG | - | tig0031784:20282-20301 | Msa1447530:intron | 50.0% | |
| !! | TTTTGGGAAGCCCGAAGCAT+CGG | + | tig0031784:20295-20314 | None:intergenic | 50.0% |
| ! | GGGAAAGTGTGCAAGGCAAT+AGG | + | tig0031784:20407-20426 | None:intergenic | 50.0% |
| ! | ATCTGGGATGAGGAGATGCA+TGG | - | tig0031784:21651-21670 | Msa1447530:CDS | 50.0% |
| ! | GCTCCCAATTTTGTAGGTCG+TGG | - | tig0031784:19612-19631 | Msa1447530:CDS | 50.0% |
| GAAGTGGCCAAAACCCTAAG+GGG | + | tig0031784:20094-20113 | None:intergenic | 50.0% | |
| !! | AGGGTTTTGGCCACTTCAAC+CGG | - | tig0031784:20097-20116 | Msa1447530:intron | 50.0% |
| ! | GAAGGTTGAGAGCTTTGTCC+CGG | + | tig0031784:20119-20138 | None:intergenic | 50.0% |
| GGTTATCAGGACCGATGCTT+CGG | - | tig0031784:20281-20300 | Msa1447530:intron | 50.0% | |
| GTTATCAGGACCGATGCTTC+GGG | - | tig0031784:20282-20301 | Msa1447530:intron | 50.0% | |
| !! | TTTTGGGAAGCCCGAAGCAT+CGG | + | tig0031784:20295-20314 | None:intergenic | 50.0% |
| ! | GGGAAAGTGTGCAAGGCAAT+AGG | + | tig0031784:20407-20426 | None:intergenic | 50.0% |
| ! | ATCTGGGATGAGGAGATGCA+TGG | - | tig0031784:21651-21670 | Msa1447530:CDS | 50.0% |
| !! | GGGTTTTGGCCACTTCAACC+GGG | - | tig0031784:20098-20117 | Msa1447530:intron | 55.0% |
| ! | GAGCTTTGTCCCGGTTGAAG+TGG | + | tig0031784:20110-20129 | None:intergenic | 55.0% |
| CACCATGTGGAGTCTGAGGA+GGG | - | tig0031784:20167-20186 | Msa1447530:intron | 55.0% | |
| TACCCTCCTCAGACTCCACA+TGG | + | tig0031784:20172-20191 | None:intergenic | 55.0% | |
| TGGGGCTAATTGGGCCAATC+AGG | - | tig0031784:20232-20251 | Msa1447530:intron | 55.0% | |
| GGTGTCTGCTACCCCTCTTA+AGG | - | tig0031784:21500-21519 | Msa1447530:CDS | 55.0% | |
| !! | GGGTTTTGGCCACTTCAACC+GGG | - | tig0031784:20098-20117 | Msa1447530:intron | 55.0% |
| ! | GAGCTTTGTCCCGGTTGAAG+TGG | + | tig0031784:20110-20129 | None:intergenic | 55.0% |
| CACCATGTGGAGTCTGAGGA+GGG | - | tig0031784:20167-20186 | Msa1447530:intron | 55.0% | |
| TACCCTCCTCAGACTCCACA+TGG | + | tig0031784:20172-20191 | None:intergenic | 55.0% | |
| TGGGGCTAATTGGGCCAATC+AGG | - | tig0031784:20232-20251 | Msa1447530:intron | 55.0% | |
| GGTGTCTGCTACCCCTCTTA+AGG | - | tig0031784:21500-21519 | Msa1447530:CDS | 55.0% | |
| CTCGCACCATGTGGAGTCTG+AGG | - | tig0031784:20163-20182 | Msa1447530:intron | 60.0% | |
| GCACCATGTGGAGTCTGAGG+AGG | - | tig0031784:20166-20185 | Msa1447530:intron | 60.0% | |
| AGAGGGGTAGCAGACACCCA+AGG | + | tig0031784:21498-21517 | None:intergenic | 60.0% | |
| CTCGCACCATGTGGAGTCTG+AGG | - | tig0031784:20163-20182 | Msa1447530:intron | 60.0% | |
| GCACCATGTGGAGTCTGAGG+AGG | - | tig0031784:20166-20185 | Msa1447530:intron | 60.0% | |
| AGAGGGGTAGCAGACACCCA+AGG | + | tig0031784:21498-21517 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0031784 | gene | 19468 | 21680 | 19468 | ID=Msa1447530;Name=Msa1447530 |
| tig0031784 | mRNA | 19468 | 21680 | 19468 | ID=Msa1447530-mRNA-1;Parent=Msa1447530;Name=Msa1447530-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|0.5|1|1|2|0|415 |
| tig0031784 | exon | 20626 | 21680 | 20626 | ID=Msa1447530-mRNA-1:exon:15958;Parent=Msa1447530-mRNA-1 |
| tig0031784 | exon | 19468 | 19660 | 19468 | ID=Msa1447530-mRNA-1:exon:15957;Parent=Msa1447530-mRNA-1 |
| tig0031784 | CDS | 20626 | 21680 | 20626 | ID=Msa1447530-mRNA-1:cds;Parent=Msa1447530-mRNA-1 |
| tig0031784 | CDS | 19468 | 19660 | 19468 | ID=Msa1447530-mRNA-1:cds;Parent=Msa1447530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
