Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1447830 | sp|Q9FIM0|AGL82_ARATH | 30.380 | 158 | 105 | 3 | 6 | 160 | 6 | 161 | 8.98e-17 | 83.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1447830 | A0A072VR19 | 92.090 | 354 | 19 | 2 | 1 | 352 | 1 | 347 | 0.0 | 655 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1447830 | TF | MADS-M-type |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1447830 | MtrunA17_Chr1g0212151 | 92.090 | 354 | 19 | 2 | 1 | 352 | 1 | 347 | 0.0 | 655 |
| Msa1447830 | MtrunA17_Chr6g0457851 | 73.596 | 356 | 80 | 3 | 1 | 352 | 11 | 356 | 0.0 | 533 |
| Msa1447830 | MtrunA17_Chr6g0449861 | 61.667 | 360 | 117 | 7 | 1 | 352 | 9 | 355 | 1.07e-143 | 413 |
| Msa1447830 | MtrunA17_Chr6g0449851 | 56.742 | 356 | 109 | 6 | 1 | 352 | 1 | 315 | 5.08e-131 | 379 |
| Msa1447830 | MtrunA17_Chr4g0059631 | 41.935 | 155 | 87 | 1 | 1 | 155 | 1 | 152 | 1.76e-35 | 131 |
| Msa1447830 | MtrunA17_Chr1g0212471 | 32.796 | 186 | 124 | 1 | 1 | 186 | 1 | 185 | 1.16e-32 | 122 |
| Msa1447830 | MtrunA17_Chr4g0022641 | 37.126 | 167 | 102 | 1 | 1 | 167 | 1 | 164 | 2.06e-30 | 120 |
| Msa1447830 | MtrunA17_Chr2g0303981 | 38.365 | 159 | 93 | 2 | 3 | 160 | 5 | 159 | 6.75e-29 | 111 |
| Msa1447830 | MtrunA17_Chr5g0432691 | 34.454 | 119 | 70 | 4 | 1 | 118 | 1 | 112 | 1.69e-15 | 73.9 |
| Msa1447830 | MtrunA17_Chr3g0134451 | 33.945 | 109 | 64 | 3 | 1 | 109 | 1 | 101 | 3.10e-14 | 73.2 |
| Msa1447830 | MtrunA17_Chr3g0107381 | 23.478 | 230 | 151 | 8 | 1 | 214 | 1 | 221 | 4.67e-14 | 71.2 |
| Msa1447830 | MtrunA17_Chr4g0014321 | 35.897 | 117 | 60 | 4 | 1 | 116 | 1 | 103 | 2.65e-13 | 68.9 |
| Msa1447830 | MtrunA17_Chr8g0379021 | 30.625 | 160 | 84 | 5 | 2 | 144 | 12 | 161 | 3.84e-12 | 64.7 |
| Msa1447830 | MtrunA17_Chr3g0107351 | 32.759 | 116 | 69 | 4 | 3 | 116 | 2 | 110 | 7.24e-12 | 63.5 |
| Msa1447830 | MtrunA17_Chr2g0284911 | 28.025 | 157 | 98 | 4 | 1 | 154 | 16 | 160 | 1.42e-11 | 64.7 |
| Msa1447830 | MtrunA17_Chr3g0107341 | 34.188 | 117 | 66 | 5 | 3 | 116 | 2 | 110 | 1.83e-11 | 62.4 |
| Msa1447830 | MtrunA17_Chr3g0107361 | 29.375 | 160 | 99 | 6 | 3 | 154 | 2 | 155 | 4.14e-11 | 61.2 |
| Msa1447830 | MtrunA17_Chr1g0197321 | 25.949 | 158 | 103 | 5 | 1 | 150 | 1 | 152 | 4.28e-11 | 61.2 |
| Msa1447830 | MtrunA17_Chr3g0110131 | 25.703 | 249 | 138 | 8 | 1 | 214 | 1 | 237 | 4.72e-11 | 62.8 |
| Msa1447830 | MtrunA17_Chr2g0283941 | 31.481 | 108 | 66 | 4 | 2 | 108 | 3 | 103 | 4.86e-11 | 62.8 |
| Msa1447830 | MtrunA17_Chr3g0107331 | 30.909 | 110 | 69 | 3 | 3 | 111 | 2 | 105 | 4.87e-11 | 60.8 |
| Msa1447830 | MtrunA17_Chr8g0380021 | 27.632 | 152 | 101 | 3 | 1 | 152 | 17 | 159 | 5.61e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1447830 | AT5G55690.1 | 39.310 | 145 | 80 | 2 | 1 | 144 | 1 | 138 | 8.70e-25 | 103 |
| Msa1447830 | AT5G55690.2 | 39.310 | 145 | 80 | 2 | 1 | 144 | 1 | 138 | 8.70e-25 | 103 |
| Msa1447830 | AT5G58890.1 | 30.380 | 158 | 105 | 3 | 6 | 160 | 6 | 161 | 9.12e-18 | 83.6 |
| Msa1447830 | AT3G18650.1 | 25.651 | 269 | 156 | 9 | 16 | 267 | 31 | 272 | 5.92e-15 | 76.6 |
| Msa1447830 | AT1G22590.2 | 29.677 | 155 | 98 | 3 | 1 | 150 | 1 | 149 | 1.00e-12 | 66.2 |
| Msa1447830 | AT1G65330.1 | 33.333 | 111 | 67 | 4 | 3 | 112 | 2 | 106 | 1.25e-12 | 68.2 |
| Msa1447830 | AT1G65300.1 | 33.636 | 110 | 64 | 4 | 5 | 112 | 4 | 106 | 1.49e-12 | 68.2 |
| Msa1447830 | AT3G05860.2 | 37.662 | 77 | 42 | 2 | 1 | 77 | 1 | 71 | 1.93e-12 | 66.6 |
| Msa1447830 | AT2G28700.1 | 26.842 | 190 | 117 | 7 | 1 | 182 | 1 | 176 | 1.99e-12 | 68.2 |
| Msa1447830 | AT3G05860.3 | 37.662 | 77 | 42 | 2 | 1 | 77 | 1 | 71 | 2.94e-12 | 66.6 |
| Msa1447830 | AT3G05860.1 | 37.662 | 77 | 42 | 2 | 1 | 77 | 1 | 71 | 3.37e-12 | 66.6 |
| Msa1447830 | AT5G23260.3 | 27.329 | 161 | 100 | 4 | 1 | 157 | 1 | 148 | 8.55e-12 | 65.1 |
| Msa1447830 | AT5G26650.1 | 32.174 | 115 | 67 | 4 | 5 | 116 | 3 | 109 | 1.39e-11 | 65.9 |
| Msa1447830 | AT5G13790.2 | 31.967 | 122 | 74 | 3 | 1 | 122 | 1 | 113 | 6.02e-11 | 63.2 |
| Msa1447830 | AT5G23260.1 | 26.901 | 171 | 97 | 5 | 1 | 157 | 17 | 173 | 6.49e-11 | 63.2 |
| Msa1447830 | AT5G27960.1 | 31.193 | 109 | 68 | 4 | 5 | 112 | 3 | 105 | 7.49e-11 | 63.5 |
| Msa1447830 | AT2G03060.3 | 23.864 | 176 | 119 | 5 | 1 | 173 | 1 | 164 | 7.74e-11 | 63.9 |
| Msa1447830 | AT2G03060.7 | 23.864 | 176 | 119 | 5 | 1 | 173 | 1 | 164 | 7.74e-11 | 63.9 |
| Msa1447830 | AT2G03060.1 | 23.864 | 176 | 119 | 5 | 1 | 173 | 1 | 164 | 7.74e-11 | 63.9 |
| Msa1447830 | AT2G40210.1 | 31.731 | 104 | 64 | 3 | 1 | 103 | 1 | 98 | 7.85e-11 | 63.9 |
| Msa1447830 | AT4G09960.5 | 27.215 | 158 | 98 | 5 | 1 | 154 | 11 | 155 | 8.25e-11 | 62.4 |
| Msa1447830 | AT4G09960.1 | 27.215 | 158 | 98 | 5 | 1 | 154 | 1 | 145 | 8.68e-11 | 62.0 |
| Msa1447830 | AT4G09960.6 | 27.215 | 158 | 98 | 5 | 1 | 154 | 2 | 146 | 8.88e-11 | 62.0 |
| Msa1447830 | AT2G03060.2 | 22.727 | 176 | 121 | 4 | 1 | 173 | 1 | 164 | 9.45e-11 | 63.5 |
Find 96 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCTTTCCATATTGATTT+TGG | 0.055519 | tig0031945:+30780 | Msa1447830:intergenic |
| CCACATGGATTTCAACTTAA+TGG | 0.122963 | tig0031945:-30640 | Msa1447830:CDS |
| TTGTCTTTAGGCCATGTTTC+AGG | 0.191776 | tig0031945:+31444 | Msa1447830:intergenic |
| TTGATGTTAATGGGGCTAAT+TGG | 0.199081 | tig0031945:-30867 | Msa1447830:CDS |
| AAATCCACGACCTACAAAAT+TGG | 0.234450 | tig0031945:+31473 | Msa1447830:intergenic |
| TACAAGAATATTGATGTTAA+TGG | 0.237026 | tig0031945:-30877 | Msa1447830:CDS |
| GCATTTCCATTGTAATAGTA+TGG | 0.257144 | tig0031945:+30727 | Msa1447830:intergenic |
| ACTTCCGTGATTTCTCCTTT+TGG | 0.266267 | tig0031945:+31589 | Msa1447830:intergenic |
| TACTGCTACGCAACAAGTTC+TGG | 0.294127 | tig0031945:+29517 | Msa1447830:intergenic |
| ACAAGAATATTGATGTTAAT+GGG | 0.303821 | tig0031945:-30876 | Msa1447830:CDS |
| AACAAGAGGATATGTCTATC+TGG | 0.312544 | tig0031945:-29455 | Msa1447830:CDS |
| GGTTATCAGGACCGATGCTT+CGG | 0.326389 | tig0031945:-30808 | Msa1447830:CDS |
| GATATTATTTGCTAGCAAAC+TGG | 0.357133 | tig0031945:-31223 | Msa1447830:CDS |
| AATGAATCTTTCAATTCTCT+TGG | 0.359377 | tig0031945:-31258 | Msa1447830:CDS |
| GGGTCGTGGAAGAATATCTA+TGG | 0.367126 | tig0031945:-31619 | Msa1447830:CDS |
| TGATGTTAATGGGGCTAATT+GGG | 0.367522 | tig0031945:-30866 | Msa1447830:CDS |
| ATTAACATCAATATTCTTGT+AGG | 0.368101 | tig0031945:+30879 | Msa1447830:intergenic |
| TGGGGCTAATTGGGCCAATC+AGG | 0.372470 | tig0031945:-30857 | Msa1447830:CDS |
| AATGTTAATGATACCTATAA+TGG | 0.373254 | tig0031945:-30832 | Msa1447830:CDS |
| TCTTGAACATCATAGATCTT+AGG | 0.373714 | tig0031945:+31366 | Msa1447830:intergenic |
| ATGTTAATGATACCTATAAT+GGG | 0.375349 | tig0031945:-30831 | Msa1447830:CDS |
| ATCATTAACATTAACCTGAT+TGG | 0.375551 | tig0031945:+30843 | Msa1447830:intergenic |
| ATGGTGCGAGCTTTGTATAT+TGG | 0.377737 | tig0031945:+30939 | Msa1447830:intergenic |
| CGGGCTTCCCAAAATCAATA+TGG | 0.380849 | tig0031945:-30788 | Msa1447830:CDS |
| GTTATCAGGACCGATGCTTC+GGG | 0.385864 | tig0031945:-30807 | Msa1447830:CDS |
| GGGAAAGTGTGCAAGGCAAT+AGG | 0.393610 | tig0031945:+30685 | Msa1447830:intergenic |
| GATTTGAGAGATTCTGAAAA+GGG | 0.398612 | tig0031945:+30665 | Msa1447830:intergenic |
| CTTGGGAATCTCACCTTAAG+AGG | 0.415136 | tig0031945:+29576 | Msa1447830:intergenic |
| TATGCTAAAAGAAGATCATA+AGG | 0.417664 | tig0031945:-31166 | Msa1447830:CDS |
| GGTGTCTGCTACCCCTCTTA+AGG | 0.424800 | tig0031945:-29589 | Msa1447830:CDS |
| TTTCCAAGTGTCCACTCAAA+AGG | 0.425572 | tig0031945:-29550 | Msa1447830:CDS |
| AAGGAAGGATGGAGCTGAAA+AGG | 0.426747 | tig0031945:-30764 | Msa1447830:CDS |
| TTATCACTAATATTCATCAT+TGG | 0.435936 | tig0031945:+31024 | Msa1447830:intergenic |
| AACATCAACATCACAAAGAA+TGG | 0.436469 | tig0031945:+31515 | Msa1447830:intergenic |
| ATCCATTCCATTACTGTTGG+AGG | 0.440584 | tig0031945:-29478 | Msa1447830:CDS |
| ACTATAACACAACAAATGAT+AGG | 0.448494 | tig0031945:-31392 | Msa1447830:CDS |
| TTAACATCAATATTCTTGTA+GGG | 0.460944 | tig0031945:+30880 | Msa1447830:intergenic |
| GTGGACACTTGGAAAAGTCT+TGG | 0.468552 | tig0031945:+29558 | Msa1447830:intergenic |
| AATCCACGACCTACAAAATT+GGG | 0.470390 | tig0031945:+31474 | Msa1447830:intergenic |
| TCTATCCATTCCATTACTGT+TGG | 0.473770 | tig0031945:-29481 | Msa1447830:CDS |
| GGAAAGTGTGCAAGGCAATA+GGG | 0.475843 | tig0031945:+30686 | Msa1447830:intergenic |
| AGATTTGAGAGATTCTGAAA+AGG | 0.476219 | tig0031945:+30664 | Msa1447830:intergenic |
| TAGTTTCTCTTTACGCACTT+TGG | 0.478267 | tig0031945:+31302 | Msa1447830:intergenic |
| CAAGCTCATATGTTCATGAA+TGG | 0.478657 | tig0031945:-30595 | Msa1447830:CDS |
| ATCTATGGAACTCATCCAAA+AGG | 0.478947 | tig0031945:-31604 | Msa1447830:CDS |
| GAAGTAGTAACTAGGATTCA+AGG | 0.479038 | tig0031945:+31089 | Msa1447830:intergenic |
| GAAGGTTGAGAGCTTTGTCC+CGG | 0.483719 | tig0031945:+30973 | Msa1447830:intergenic |
| TTGAAAGATTCATTCCAAGT+TGG | 0.490806 | tig0031945:+31267 | Msa1447830:intergenic |
| TGGACACTTGGAAAAGTCTT+GGG | 0.493815 | tig0031945:+29559 | Msa1447830:intergenic |
| TCACTAATATTCATCATTGG+AGG | 0.494747 | tig0031945:+31027 | Msa1447830:intergenic |
| ATCAATATGGAAAGGAAGGA+TGG | 0.505258 | tig0031945:-30775 | Msa1447830:CDS |
| CAAAATCAATATGGAAAGGA+AGG | 0.508161 | tig0031945:-30779 | Msa1447830:CDS |
| GTCAACATTTCAAAAGAGAA+AGG | 0.514992 | tig0031945:-31568 | Msa1447830:CDS |
| TTGAAGTGGCCAAAACCCTA+AGG | 0.517435 | tig0031945:+30996 | Msa1447830:intergenic |
| TCTTGTTCCTCCAACAGTAA+TGG | 0.528355 | tig0031945:+29471 | Msa1447830:intergenic |
| ACAAGAGGATATGTCTATCT+GGG | 0.536876 | tig0031945:-29454 | Msa1447830:CDS |
| CTCATATGTTCATGAATGGA+AGG | 0.537554 | tig0031945:-30591 | Msa1447830:CDS |
| TCGTCACCATACTATTACAA+TGG | 0.539170 | tig0031945:-30733 | Msa1447830:CDS |
| TTCCTCCAACAGTAATGGAA+TGG | 0.542058 | tig0031945:+29476 | Msa1447830:intergenic |
| TAAAGATGATGTATCCAACT+TGG | 0.548629 | tig0031945:-31281 | Msa1447830:CDS |
| ATCTTTCAATTCTCTTGGAG+CGG | 0.552140 | tig0031945:-31253 | Msa1447830:CDS |
| ACTTAATGGATTCAATGCTA+AGG | 0.552446 | tig0031945:-30626 | Msa1447830:CDS |
| GGATATGTCTATCTGGGATG+AGG | 0.552655 | tig0031945:-29448 | Msa1447830:CDS |
| ATATTGGAAATCAAAGAAGA+AGG | 0.553651 | tig0031945:+30955 | Msa1447830:intergenic |
| ATGCTAAAAGAAGATCATAA+GGG | 0.556585 | tig0031945:-31165 | Msa1447830:CDS |
| ACATTTCAAAAGAGAAAGGA+AGG | 0.560555 | tig0031945:-31564 | Msa1447830:CDS |
| GAGCTTTGTCCCGGTTGAAG+TGG | 0.560628 | tig0031945:+30982 | Msa1447830:intergenic |
| ATGAGATTGAAGTAGTAACT+AGG | 0.569090 | tig0031945:+31081 | Msa1447830:intergenic |
| ATTACTGTTGGAGGAACAAG+AGG | 0.569445 | tig0031945:-29469 | Msa1447830:CDS |
| TTGGGAATCTCACCTTAAGA+GGG | 0.571012 | tig0031945:+29577 | None:intergenic |
| TGAAGTGGCCAAAACCCTAA+GGG | 0.571128 | tig0031945:+30997 | None:intergenic |
| TATTCGTAGAAAATGGGTCG+TGG | 0.573273 | tig0031945:-31633 | None:intergenic |
| TTCCCAAAATCAATATGGAA+AGG | 0.576621 | tig0031945:-30783 | Msa1447830:CDS |
| CTCGCACCATGTGGAGTCTG+AGG | 0.578924 | tig0031945:-30926 | Msa1447830:CDS |
| TGTTAATGATACCTATAATG+GGG | 0.582350 | tig0031945:-30830 | Msa1447830:CDS |
| CACCATGTGGAGTCTGAGGA+GGG | 0.590680 | tig0031945:-30922 | Msa1447830:CDS |
| TAACATCAATATTCTTGTAG+GGG | 0.591713 | tig0031945:+30881 | Msa1447830:intergenic |
| TCATCCAAAAGGAGAAATCA+CGG | 0.593512 | tig0031945:-31593 | Msa1447830:CDS |
| CTGAAAAGGGAAAGTGTGCA+AGG | 0.597692 | tig0031945:+30678 | Msa1447830:intergenic |
| ATATGTTTGTGCTTGAGACA+TGG | 0.597890 | tig0031945:+31050 | Msa1447830:intergenic |
| ATCTGGGATGAGGAGATGCA+TGG | 0.603930 | tig0031945:-29438 | Msa1447830:CDS |
| CAAGAATATTGATGTTAATG+GGG | 0.607609 | tig0031945:-30875 | Msa1447830:CDS |
| CTATTACAATGGAAATGCAA+TGG | 0.613734 | tig0031945:-30722 | Msa1447830:CDS |
| GCACCATGTGGAGTCTGAGG+AGG | 0.614956 | tig0031945:-30923 | Msa1447830:CDS |
| TACCCTCCTCAGACTCCACA+TGG | 0.630866 | tig0031945:+30920 | Msa1447830:intergenic |
| GATTTGCTGAACCTGAAACA+TGG | 0.641427 | tig0031945:-31455 | Msa1447830:CDS |
| GAAGTGGCCAAAACCCTAAG+GGG | 0.646061 | tig0031945:+30998 | Msa1447830:intergenic |
| TAGTAACTAGGATTCAAGGA+AGG | 0.647567 | tig0031945:+31093 | Msa1447830:intergenic |
| GTTAATGATACCTATAATGG+GGG | 0.651079 | tig0031945:-30829 | Msa1447830:CDS |
| AGAGGGGTAGCAGACACCCA+AGG | 0.659168 | tig0031945:+29594 | Msa1447830:intergenic |
| AATCTCTCAAATCTACCACA+TGG | 0.661283 | tig0031945:-30655 | Msa1447830:CDS |
| TATACAAAGCTCGCACCATG+TGG | 0.663687 | tig0031945:-30935 | Msa1447830:CDS |
| TGGGAATCTCACCTTAAGAG+GGG | 0.696658 | tig0031945:+29578 | Msa1447830:intergenic |
| AATAGCTCATGAATCACACA+AGG | 0.705760 | tig0031945:-31136 | Msa1447830:CDS |
| ATGGCCTAAAGACAAAAGAG+AGG | 0.713382 | tig0031945:-31436 | Msa1447830:CDS |
| CCATTAAGTTGAAATCCATG+TGG | 0.755933 | tig0031945:+30640 | Msa1447820:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAACAAAAATTTCTTTTCT+TGG | - | tig0031945:30594-30613 | Msa1447830:CDS | 15.0% |
| !! | TAATACTAATATATAGATGA+GGG | - | tig0031945:30782-30801 | Msa1447830:CDS | 15.0% |
| !! | TTTGTTTCATAACATAAAAA+AGG | + | tig0031945:30819-30838 | Msa1447830:intergenic | 15.0% |
| !!! | ATTTTGAAGAAATTAATGAT+AGG | - | tig0031945:30891-30910 | Msa1447830:CDS | 15.0% |
| !!! | TTTTGAAGAAATTAATGATA+GGG | - | tig0031945:30892-30911 | Msa1447830:CDS | 15.0% |
| !! | ATAAACTTGAAAATACAAAT+AGG | - | tig0031945:31237-31256 | Msa1447830:CDS | 15.0% |
| !! | TTTCTTAATTACAAGTAATT+TGG | - | tig0031945:31273-31292 | Msa1447830:CDS | 15.0% |
| !!! | TTAACAAAAATTTCTTTTCT+TGG | - | tig0031945:30594-30613 | Msa1447830:CDS | 15.0% |
| !! | TAATACTAATATATAGATGA+GGG | - | tig0031945:30782-30801 | Msa1447830:CDS | 15.0% |
| !! | TTTGTTTCATAACATAAAAA+AGG | + | tig0031945:30819-30838 | Msa1447830:intergenic | 15.0% |
| !!! | ATTTTGAAGAAATTAATGAT+AGG | - | tig0031945:30891-30910 | Msa1447830:CDS | 15.0% |
| !!! | TTTTGAAGAAATTAATGATA+GGG | - | tig0031945:30892-30911 | Msa1447830:CDS | 15.0% |
| !! | ATAAACTTGAAAATACAAAT+AGG | - | tig0031945:31237-31256 | Msa1447830:CDS | 15.0% |
| !! | TTTCTTAATTACAAGTAATT+TGG | - | tig0031945:31273-31292 | Msa1447830:CDS | 15.0% |
| !! | TTATCACTAATATTCATCAT+TGG | + | tig0031945:30031-30050 | Msa1447830:intergenic | 20.0% |
| !! | TTAACATCAATATTCTTGTA+GGG | + | tig0031945:30175-30194 | Msa1447830:intergenic | 20.0% |
| !! | ATTAACATCAATATTCTTGT+AGG | + | tig0031945:30176-30195 | Msa1447830:intergenic | 20.0% |
| !! | TACAAGAATATTGATGTTAA+TGG | - | tig0031945:30175-30194 | Msa1447830:intron | 20.0% |
| !! | ACAAGAATATTGATGTTAAT+GGG | - | tig0031945:30176-30195 | Msa1447830:intron | 20.0% |
| !! | AATGTTAATGATACCTATAA+TGG | - | tig0031945:30220-30239 | Msa1447830:intron | 20.0% |
| !! | ATGTTAATGATACCTATAAT+GGG | - | tig0031945:30221-30240 | Msa1447830:intron | 20.0% |
| !! | CTAATACTAATATATAGATG+AGG | - | tig0031945:30781-30800 | Msa1447830:CDS | 20.0% |
| !!! | CACTGATGTAATTTTTATAT+TGG | - | tig0031945:30843-30862 | Msa1447830:CDS | 20.0% |
| !! | AATATGACAAACTAAAATGT+TGG | + | tig0031945:30999-31018 | Msa1447830:intergenic | 20.0% |
| !!! | AGTTATTATTCTAGGATTTA+AGG | + | tig0031945:31209-31228 | Msa1447830:intergenic | 20.0% |
| !! | CATAACTAAGTTATTATTCT+AGG | + | tig0031945:31217-31236 | Msa1447830:intergenic | 20.0% |
| !! | AACTATGGATATTTCTTATT+AGG | + | tig0031945:31311-31330 | Msa1447830:intergenic | 20.0% |
| !! | AGTGACAATATTAATATTCA+TGG | - | tig0031945:31338-31357 | Msa1447830:CDS | 20.0% |
| !! | TTATCACTAATATTCATCAT+TGG | + | tig0031945:30031-30050 | Msa1447830:intergenic | 20.0% |
| !! | TTAACATCAATATTCTTGTA+GGG | + | tig0031945:30175-30194 | Msa1447830:intergenic | 20.0% |
| !! | ATTAACATCAATATTCTTGT+AGG | + | tig0031945:30176-30195 | Msa1447830:intergenic | 20.0% |
| !! | TACAAGAATATTGATGTTAA+TGG | - | tig0031945:30175-30194 | Msa1447830:intron | 20.0% |
| !! | ACAAGAATATTGATGTTAAT+GGG | - | tig0031945:30176-30195 | Msa1447830:intron | 20.0% |
| !! | AATGTTAATGATACCTATAA+TGG | - | tig0031945:30220-30239 | Msa1447830:intron | 20.0% |
| !! | ATGTTAATGATACCTATAAT+GGG | - | tig0031945:30221-30240 | Msa1447830:intron | 20.0% |
| !! | CTAATACTAATATATAGATG+AGG | - | tig0031945:30781-30800 | Msa1447830:CDS | 20.0% |
| !!! | CACTGATGTAATTTTTATAT+TGG | - | tig0031945:30843-30862 | Msa1447830:CDS | 20.0% |
| !! | AATATGACAAACTAAAATGT+TGG | + | tig0031945:30999-31018 | Msa1447830:intergenic | 20.0% |
| !!! | AGTTATTATTCTAGGATTTA+AGG | + | tig0031945:31209-31228 | Msa1447830:intergenic | 20.0% |
| !! | CATAACTAAGTTATTATTCT+AGG | + | tig0031945:31217-31236 | Msa1447830:intergenic | 20.0% |
| !! | AACTATGGATATTTCTTATT+AGG | + | tig0031945:31311-31330 | Msa1447830:intergenic | 20.0% |
| !! | AGTGACAATATTAATATTCA+TGG | - | tig0031945:31338-31357 | Msa1447830:CDS | 20.0% |
| !! | TTGTGTTATAGTACTTTTGA+AGG | + | tig0031945:29652-29671 | Msa1447830:intergenic | 25.0% |
| ! | ACTATAACACAACAAATGAT+AGG | - | tig0031945:29660-29679 | Msa1447830:intron | 25.0% |
| !!! | TGATGTTCAAGAGTATTTTA+AGG | - | tig0031945:29697-29716 | Msa1447830:intron | 25.0% |
| !!! | TTCAAGAGTATTTTAAGGAA+AGG | - | tig0031945:29702-29721 | Msa1447830:intron | 25.0% |
| ! | AATGAATCTTTCAATTCTCT+TGG | - | tig0031945:29794-29813 | Msa1447830:intron | 25.0% |
| ! | TATGCTAAAAGAAGATCATA+AGG | - | tig0031945:29886-29905 | Msa1447830:intron | 25.0% |
| ! | ATGCTAAAAGAAGATCATAA+GGG | - | tig0031945:29887-29906 | Msa1447830:intron | 25.0% |
| ! | ATATTGGAAATCAAAGAAGA+AGG | + | tig0031945:30100-30119 | Msa1447830:intergenic | 25.0% |
| ! | TAACATCAATATTCTTGTAG+GGG | + | tig0031945:30174-30193 | Msa1447830:intergenic | 25.0% |
| ! | CAAGAATATTGATGTTAATG+GGG | - | tig0031945:30177-30196 | Msa1447830:intron | 25.0% |
| ! | ATCATTAACATTAACCTGAT+TGG | + | tig0031945:30212-30231 | Msa1447830:intergenic | 25.0% |
| ! | TGTTAATGATACCTATAATG+GGG | - | tig0031945:30222-30241 | Msa1447830:intron | 25.0% |
| !!! | TTCCTTTCCATATTGATTTT+GGG | + | tig0031945:30274-30293 | Msa1447830:intergenic | 25.0% |
| ! | TGGTGCTTATTATATATTTC+TGG | - | tig0031945:30639-30658 | Msa1447830:CDS | 25.0% |
| ! | GGTGCTTATTATATATTTCT+GGG | - | tig0031945:30640-30659 | Msa1447830:CDS | 25.0% |
| ! | TGGATATTTCTTATTAGGTA+GGG | + | tig0031945:31306-31325 | Msa1447830:intergenic | 25.0% |
| ! | ATGGATATTTCTTATTAGGT+AGG | + | tig0031945:31307-31326 | Msa1447830:intergenic | 25.0% |
| !! | TTGTCACTTCAAAATAACTA+TGG | + | tig0031945:31326-31345 | Msa1447830:intergenic | 25.0% |
| !! | ATTTTTCACTGAGTATTACT+AGG | - | tig0031945:31400-31419 | Msa1447830:CDS | 25.0% |
| !! | TTGTGTTATAGTACTTTTGA+AGG | + | tig0031945:29652-29671 | Msa1447830:intergenic | 25.0% |
| ! | ACTATAACACAACAAATGAT+AGG | - | tig0031945:29660-29679 | Msa1447830:intron | 25.0% |
| !!! | TGATGTTCAAGAGTATTTTA+AGG | - | tig0031945:29697-29716 | Msa1447830:intron | 25.0% |
| !!! | TTCAAGAGTATTTTAAGGAA+AGG | - | tig0031945:29702-29721 | Msa1447830:intron | 25.0% |
| ! | AATGAATCTTTCAATTCTCT+TGG | - | tig0031945:29794-29813 | Msa1447830:intron | 25.0% |
| ! | TATGCTAAAAGAAGATCATA+AGG | - | tig0031945:29886-29905 | Msa1447830:intron | 25.0% |
| ! | ATGCTAAAAGAAGATCATAA+GGG | - | tig0031945:29887-29906 | Msa1447830:intron | 25.0% |
| ! | ATATTGGAAATCAAAGAAGA+AGG | + | tig0031945:30100-30119 | Msa1447830:intergenic | 25.0% |
| ! | TAACATCAATATTCTTGTAG+GGG | + | tig0031945:30174-30193 | Msa1447830:intergenic | 25.0% |
| ! | CAAGAATATTGATGTTAATG+GGG | - | tig0031945:30177-30196 | Msa1447830:intron | 25.0% |
| ! | ATCATTAACATTAACCTGAT+TGG | + | tig0031945:30212-30231 | Msa1447830:intergenic | 25.0% |
| ! | TGTTAATGATACCTATAATG+GGG | - | tig0031945:30222-30241 | Msa1447830:intron | 25.0% |
| !!! | TTCCTTTCCATATTGATTTT+GGG | + | tig0031945:30274-30293 | Msa1447830:intergenic | 25.0% |
| ! | TGGTGCTTATTATATATTTC+TGG | - | tig0031945:30639-30658 | Msa1447830:CDS | 25.0% |
| ! | GGTGCTTATTATATATTTCT+GGG | - | tig0031945:30640-30659 | Msa1447830:CDS | 25.0% |
| ! | TGGATATTTCTTATTAGGTA+GGG | + | tig0031945:31306-31325 | Msa1447830:intergenic | 25.0% |
| ! | ATGGATATTTCTTATTAGGT+AGG | + | tig0031945:31307-31326 | Msa1447830:intergenic | 25.0% |
| !! | TTGTCACTTCAAAATAACTA+TGG | + | tig0031945:31326-31345 | Msa1447830:intergenic | 25.0% |
| !! | ATTTTTCACTGAGTATTACT+AGG | - | tig0031945:31400-31419 | Msa1447830:CDS | 25.0% |
| GTCAACATTTCAAAAGAGAA+AGG | - | tig0031945:29484-29503 | Msa1447830:CDS | 30.0% | |
| ACATTTCAAAAGAGAAAGGA+AGG | - | tig0031945:29488-29507 | Msa1447830:CDS | 30.0% | |
| AACATCAACATCACAAAGAA+TGG | + | tig0031945:29540-29559 | Msa1447830:intergenic | 30.0% | |
| TCTTGAACATCATAGATCTT+AGG | + | tig0031945:29689-29708 | Msa1447830:intergenic | 30.0% | |
| TAAAGATGATGTATCCAACT+TGG | - | tig0031945:29771-29790 | Msa1447830:intron | 30.0% | |
| TTGAAAGATTCATTCCAAGT+TGG | + | tig0031945:29788-29807 | Msa1447830:intergenic | 30.0% | |
| ! | GATATTATTTGCTAGCAAAC+TGG | - | tig0031945:29829-29848 | Msa1447830:intron | 30.0% |
| ATGAGATTGAAGTAGTAACT+AGG | + | tig0031945:29974-29993 | Msa1447830:intergenic | 30.0% | |
| TCACTAATATTCATCATTGG+AGG | + | tig0031945:30028-30047 | Msa1447830:intergenic | 30.0% | |
| ATTAGTGATAAAAACCCCTT+AGG | - | tig0031945:30040-30059 | Msa1447830:intron | 30.0% | |
| TTAGTGATAAAAACCCCTTA+GGG | - | tig0031945:30041-30060 | Msa1447830:intron | 30.0% | |
| GTTAATGATACCTATAATGG+GGG | - | tig0031945:30223-30242 | Msa1447830:intron | 30.0% | |
| TTCCCAAAATCAATATGGAA+AGG | - | tig0031945:30269-30288 | Msa1447830:intron | 30.0% | |
| !!! | CTTCCTTTCCATATTGATTT+TGG | + | tig0031945:30275-30294 | Msa1447830:intergenic | 30.0% |
| CAAAATCAATATGGAAAGGA+AGG | - | tig0031945:30273-30292 | Msa1447830:intron | 30.0% | |
| GCATTTCCATTGTAATAGTA+TGG | + | tig0031945:30328-30347 | Msa1447830:intergenic | 30.0% | |
| CTATTACAATGGAAATGCAA+TGG | - | tig0031945:30330-30349 | Msa1447830:intron | 30.0% | |
| ! | GATTTGAGAGATTCTGAAAA+GGG | + | tig0031945:30390-30409 | Msa1447830:intergenic | 30.0% |
| ! | AGATTTGAGAGATTCTGAAA+AGG | + | tig0031945:30391-30410 | Msa1447830:intergenic | 30.0% |
| !! | ACTTAATGGATTCAATGCTA+AGG | - | tig0031945:30426-30445 | Msa1447830:intron | 30.0% |
| TTTAAGTCGAACAAATAGCT+TGG | - | tig0031945:30619-30638 | Msa1447830:CDS | 30.0% | |
| AGAAATTAATGATAGGGAGA+TGG | - | tig0031945:30898-30917 | Msa1447830:CDS | 30.0% | |
| ATAAACTTCCTCAATTTCGT+CGG | - | tig0031945:31050-31069 | Msa1447830:CDS | 30.0% | |
| AATTTCGTCGGAAATAGAAA+AGG | - | tig0031945:31062-31081 | Msa1447830:CDS | 30.0% | |
| AGATAAGGACTACCAATATA+TGG | + | tig0031945:31186-31205 | Msa1447830:intergenic | 30.0% | |
| !! | TTCTAGGATTTAAGGAGATA+AGG | + | tig0031945:31201-31220 | Msa1447830:intergenic | 30.0% |
| TTTCTTATTAGGTAGGGTAA+AGG | + | tig0031945:31300-31319 | Msa1447830:intergenic | 30.0% | |
| GTCAACATTTCAAAAGAGAA+AGG | - | tig0031945:29484-29503 | Msa1447830:CDS | 30.0% | |
| ACATTTCAAAAGAGAAAGGA+AGG | - | tig0031945:29488-29507 | Msa1447830:CDS | 30.0% | |
| AACATCAACATCACAAAGAA+TGG | + | tig0031945:29540-29559 | Msa1447830:intergenic | 30.0% | |
| TCTTGAACATCATAGATCTT+AGG | + | tig0031945:29689-29708 | Msa1447830:intergenic | 30.0% | |
| TAAAGATGATGTATCCAACT+TGG | - | tig0031945:29771-29790 | Msa1447830:intron | 30.0% | |
| TTGAAAGATTCATTCCAAGT+TGG | + | tig0031945:29788-29807 | Msa1447830:intergenic | 30.0% | |
| ! | GATATTATTTGCTAGCAAAC+TGG | - | tig0031945:29829-29848 | Msa1447830:intron | 30.0% |
| ATGAGATTGAAGTAGTAACT+AGG | + | tig0031945:29974-29993 | Msa1447830:intergenic | 30.0% | |
| TCACTAATATTCATCATTGG+AGG | + | tig0031945:30028-30047 | Msa1447830:intergenic | 30.0% | |
| ATTAGTGATAAAAACCCCTT+AGG | - | tig0031945:30040-30059 | Msa1447830:intron | 30.0% | |
| TTAGTGATAAAAACCCCTTA+GGG | - | tig0031945:30041-30060 | Msa1447830:intron | 30.0% | |
| GTTAATGATACCTATAATGG+GGG | - | tig0031945:30223-30242 | Msa1447830:intron | 30.0% | |
| TTCCCAAAATCAATATGGAA+AGG | - | tig0031945:30269-30288 | Msa1447830:intron | 30.0% | |
| !!! | CTTCCTTTCCATATTGATTT+TGG | + | tig0031945:30275-30294 | Msa1447830:intergenic | 30.0% |
| CAAAATCAATATGGAAAGGA+AGG | - | tig0031945:30273-30292 | Msa1447830:intron | 30.0% | |
| GCATTTCCATTGTAATAGTA+TGG | + | tig0031945:30328-30347 | Msa1447830:intergenic | 30.0% | |
| CTATTACAATGGAAATGCAA+TGG | - | tig0031945:30330-30349 | Msa1447830:intron | 30.0% | |
| ! | GATTTGAGAGATTCTGAAAA+GGG | + | tig0031945:30390-30409 | Msa1447830:intergenic | 30.0% |
| ! | AGATTTGAGAGATTCTGAAA+AGG | + | tig0031945:30391-30410 | Msa1447830:intergenic | 30.0% |
| !! | ACTTAATGGATTCAATGCTA+AGG | - | tig0031945:30426-30445 | Msa1447830:intron | 30.0% |
| TTTAAGTCGAACAAATAGCT+TGG | - | tig0031945:30619-30638 | Msa1447830:CDS | 30.0% | |
| AGAAATTAATGATAGGGAGA+TGG | - | tig0031945:30898-30917 | Msa1447830:CDS | 30.0% | |
| ATAAACTTCCTCAATTTCGT+CGG | - | tig0031945:31050-31069 | Msa1447830:CDS | 30.0% | |
| AATTTCGTCGGAAATAGAAA+AGG | - | tig0031945:31062-31081 | Msa1447830:CDS | 30.0% | |
| AGATAAGGACTACCAATATA+TGG | + | tig0031945:31186-31205 | Msa1447830:intergenic | 30.0% | |
| !! | TTCTAGGATTTAAGGAGATA+AGG | + | tig0031945:31201-31220 | Msa1447830:intergenic | 30.0% |
| TTTCTTATTAGGTAGGGTAA+AGG | + | tig0031945:31300-31319 | Msa1447830:intergenic | 30.0% | |
| ATCTATGGAACTCATCCAAA+AGG | - | tig0031945:29448-29467 | Msa1447830:CDS | 35.0% | |
| TCATCCAAAAGGAGAAATCA+CGG | - | tig0031945:29459-29478 | Msa1447830:CDS | 35.0% | |
| AATCCACGACCTACAAAATT+GGG | + | tig0031945:29581-29600 | Msa1447830:intergenic | 35.0% | |
| AAATCCACGACCTACAAAAT+TGG | + | tig0031945:29582-29601 | Msa1447830:intergenic | 35.0% | |
| ! | TGTACCTCTCTTTTGTCTTT+AGG | + | tig0031945:29623-29642 | Msa1447830:intergenic | 35.0% |
| TAGTTTCTCTTTACGCACTT+TGG | + | tig0031945:29753-29772 | Msa1447830:intergenic | 35.0% | |
| ATCTTTCAATTCTCTTGGAG+CGG | - | tig0031945:29799-29818 | Msa1447830:intron | 35.0% | |
| AATAGCTCATGAATCACACA+AGG | - | tig0031945:29916-29935 | Msa1447830:intron | 35.0% | |
| TAGTAACTAGGATTCAAGGA+AGG | + | tig0031945:29962-29981 | Msa1447830:intergenic | 35.0% | |
| GAAGTAGTAACTAGGATTCA+AGG | + | tig0031945:29966-29985 | Msa1447830:intergenic | 35.0% | |
| ATATGTTTGTGCTTGAGACA+TGG | + | tig0031945:30005-30024 | Msa1447830:intergenic | 35.0% | |
| ! | ATAAAAACCCCTTAGGGTTT+TGG | - | tig0031945:30047-30066 | Msa1447830:intron | 35.0% |
| TTGATGTTAATGGGGCTAAT+TGG | - | tig0031945:30185-30204 | Msa1447830:intron | 35.0% | |
| TGATGTTAATGGGGCTAATT+GGG | - | tig0031945:30186-30205 | Msa1447830:intron | 35.0% | |
| ATCAATATGGAAAGGAAGGA+TGG | - | tig0031945:30277-30296 | Msa1447830:intron | 35.0% | |
| TCGTCACCATACTATTACAA+TGG | - | tig0031945:30319-30338 | Msa1447830:intron | 35.0% | |
| AATCTCTCAAATCTACCACA+TGG | - | tig0031945:30397-30416 | Msa1447830:intron | 35.0% | |
| !! | CCATTAAGTTGAAATCCATG+TGG | + | tig0031945:30415-30434 | Msa1447830:intergenic | 35.0% |
| CCACATGGATTTCAACTTAA+TGG | - | tig0031945:30412-30431 | Msa1447830:intron | 35.0% | |
| CAAGCTCATATGTTCATGAA+TGG | - | tig0031945:30457-30476 | Msa1447830:intron | 35.0% | |
| CTCATATGTTCATGAATGGA+AGG | - | tig0031945:30461-30480 | Msa1447830:intron | 35.0% | |
| GCATAACACTTTGAACTTTC+AGG | - | tig0031945:30491-30510 | Msa1447830:intron | 35.0% | |
| AATTAATGATAGGGAGATGG+TGG | - | tig0031945:30901-30920 | Msa1447830:CDS | 35.0% | |
| TTCTATTTCCGACGAAATTG+AGG | + | tig0031945:31061-31080 | Msa1447830:intergenic | 35.0% | |
| ! | TTTTTCTTTTACGCGAGAGT+TGG | - | tig0031945:31107-31126 | Msa1447830:CDS | 35.0% |
| !! | CAATATATGGTTGGTTCGAA+TGG | + | tig0031945:31173-31192 | Msa1447830:intergenic | 35.0% |
| CATTCGAACCAACCATATAT+TGG | - | tig0031945:31171-31190 | Msa1447830:CDS | 35.0% | |
| AAGGACTACCAATATATGGT+TGG | + | tig0031945:31182-31201 | Msa1447830:intergenic | 35.0% | |
| TTCACTGAGTATTACTAGGT+AGG | - | tig0031945:31404-31423 | Msa1447830:CDS | 35.0% | |
| TAGGTAGGTTAAGAATGTGA+GGG | - | tig0031945:31419-31438 | Msa1447830:CDS | 35.0% | |
| ! | AAGAATGTGAGGGACTTTTT+AGG | - | tig0031945:31429-31448 | Msa1447830:CDS | 35.0% |
| !!! | ACTTTTTAGGTGTGATCCTT+GGG | - | tig0031945:31442-31461 | Msa1447830:CDS | 35.0% |
| ! | GATTTTTGCTTCCTTTTGAG+TGG | + | tig0031945:31516-31535 | Msa1447830:intergenic | 35.0% |
| TCTATCCATTCCATTACTGT+TGG | - | tig0031945:31571-31590 | Msa1447830:CDS | 35.0% | |
| AACAAGAGGATATGTCTATC+TGG | - | tig0031945:31597-31616 | Msa1447830:CDS | 35.0% | |
| ACAAGAGGATATGTCTATCT+GGG | - | tig0031945:31598-31617 | Msa1447830:CDS | 35.0% | |
| ATCTATGGAACTCATCCAAA+AGG | - | tig0031945:29448-29467 | Msa1447830:CDS | 35.0% | |
| TCATCCAAAAGGAGAAATCA+CGG | - | tig0031945:29459-29478 | Msa1447830:CDS | 35.0% | |
| AATCCACGACCTACAAAATT+GGG | + | tig0031945:29581-29600 | Msa1447830:intergenic | 35.0% | |
| AAATCCACGACCTACAAAAT+TGG | + | tig0031945:29582-29601 | Msa1447830:intergenic | 35.0% | |
| ! | TGTACCTCTCTTTTGTCTTT+AGG | + | tig0031945:29623-29642 | Msa1447830:intergenic | 35.0% |
| TAGTTTCTCTTTACGCACTT+TGG | + | tig0031945:29753-29772 | Msa1447830:intergenic | 35.0% | |
| ATCTTTCAATTCTCTTGGAG+CGG | - | tig0031945:29799-29818 | Msa1447830:intron | 35.0% | |
| AATAGCTCATGAATCACACA+AGG | - | tig0031945:29916-29935 | Msa1447830:intron | 35.0% | |
| TAGTAACTAGGATTCAAGGA+AGG | + | tig0031945:29962-29981 | Msa1447830:intergenic | 35.0% | |
| GAAGTAGTAACTAGGATTCA+AGG | + | tig0031945:29966-29985 | Msa1447830:intergenic | 35.0% | |
| ATATGTTTGTGCTTGAGACA+TGG | + | tig0031945:30005-30024 | Msa1447830:intergenic | 35.0% | |
| ! | ATAAAAACCCCTTAGGGTTT+TGG | - | tig0031945:30047-30066 | Msa1447830:intron | 35.0% |
| TTGATGTTAATGGGGCTAAT+TGG | - | tig0031945:30185-30204 | Msa1447830:intron | 35.0% | |
| TGATGTTAATGGGGCTAATT+GGG | - | tig0031945:30186-30205 | Msa1447830:intron | 35.0% | |
| ATCAATATGGAAAGGAAGGA+TGG | - | tig0031945:30277-30296 | Msa1447830:intron | 35.0% | |
| TCGTCACCATACTATTACAA+TGG | - | tig0031945:30319-30338 | Msa1447830:intron | 35.0% | |
| AATCTCTCAAATCTACCACA+TGG | - | tig0031945:30397-30416 | Msa1447830:intron | 35.0% | |
| !! | CCATTAAGTTGAAATCCATG+TGG | + | tig0031945:30415-30434 | Msa1447830:intergenic | 35.0% |
| CCACATGGATTTCAACTTAA+TGG | - | tig0031945:30412-30431 | Msa1447830:intron | 35.0% | |
| CAAGCTCATATGTTCATGAA+TGG | - | tig0031945:30457-30476 | Msa1447830:intron | 35.0% | |
| CTCATATGTTCATGAATGGA+AGG | - | tig0031945:30461-30480 | Msa1447830:intron | 35.0% | |
| GCATAACACTTTGAACTTTC+AGG | - | tig0031945:30491-30510 | Msa1447830:intron | 35.0% | |
| AATTAATGATAGGGAGATGG+TGG | - | tig0031945:30901-30920 | Msa1447830:CDS | 35.0% | |
| TTCTATTTCCGACGAAATTG+AGG | + | tig0031945:31061-31080 | Msa1447830:intergenic | 35.0% | |
| ! | TTTTTCTTTTACGCGAGAGT+TGG | - | tig0031945:31107-31126 | Msa1447830:CDS | 35.0% |
| !! | CAATATATGGTTGGTTCGAA+TGG | + | tig0031945:31173-31192 | Msa1447830:intergenic | 35.0% |
| CATTCGAACCAACCATATAT+TGG | - | tig0031945:31171-31190 | Msa1447830:CDS | 35.0% | |
| AAGGACTACCAATATATGGT+TGG | + | tig0031945:31182-31201 | Msa1447830:intergenic | 35.0% | |
| TTCACTGAGTATTACTAGGT+AGG | - | tig0031945:31404-31423 | Msa1447830:CDS | 35.0% | |
| TAGGTAGGTTAAGAATGTGA+GGG | - | tig0031945:31419-31438 | Msa1447830:CDS | 35.0% | |
| ! | AAGAATGTGAGGGACTTTTT+AGG | - | tig0031945:31429-31448 | Msa1447830:CDS | 35.0% |
| !!! | ACTTTTTAGGTGTGATCCTT+GGG | - | tig0031945:31442-31461 | Msa1447830:CDS | 35.0% |
| ! | GATTTTTGCTTCCTTTTGAG+TGG | + | tig0031945:31516-31535 | Msa1447830:intergenic | 35.0% |
| TCTATCCATTCCATTACTGT+TGG | - | tig0031945:31571-31590 | Msa1447830:CDS | 35.0% | |
| AACAAGAGGATATGTCTATC+TGG | - | tig0031945:31597-31616 | Msa1447830:CDS | 35.0% | |
| ACAAGAGGATATGTCTATCT+GGG | - | tig0031945:31598-31617 | Msa1447830:CDS | 35.0% | |
| ! | ACTTCCGTGATTTCTCCTTT+TGG | + | tig0031945:29466-29485 | Msa1447830:intergenic | 40.0% |
| ! | CTCTATGCTCCCAATTTTGT+AGG | - | tig0031945:29569-29588 | Msa1447830:CDS | 40.0% |
| !! | GATTTGCTGAACCTGAAACA+TGG | - | tig0031945:29597-29616 | Msa1447830:CDS | 40.0% |
| TTGTCTTTAGGCCATGTTTC+AGG | + | tig0031945:29611-29630 | Msa1447830:intergenic | 40.0% | |
| ATGGCCTAAAGACAAAAGAG+AGG | - | tig0031945:29616-29635 | Msa1447830:intron | 40.0% | |
| ! | ATGGTGCGAGCTTTGTATAT+TGG | + | tig0031945:30116-30135 | Msa1447830:intergenic | 40.0% |
| ! | TACCTATAATGGGGGTTATC+AGG | - | tig0031945:30231-30250 | Msa1447830:intron | 40.0% |
| AGGAATTAGTTCACCGCTAT+TGG | + | tig0031945:31148-31167 | Msa1447830:intergenic | 40.0% | |
| !! | TATGGTTGGTTCGAATGGTA+AGG | + | tig0031945:31168-31187 | Msa1447830:intergenic | 40.0% |
| CTAGGTAGGTTAAGAATGTG+AGG | - | tig0031945:31418-31437 | Msa1447830:CDS | 40.0% | |
| !!! | GACTTTTTAGGTGTGATCCT+TGG | - | tig0031945:31441-31460 | Msa1447830:CDS | 40.0% |
| TTGGGAATCTCACCTTAAGA+GGG | + | tig0031945:31478-31497 | Msa1447830:intergenic | 40.0% | |
| TGGACACTTGGAAAAGTCTT+GGG | + | tig0031945:31496-31515 | Msa1447830:intergenic | 40.0% | |
| TTTCCAAGTGTCCACTCAAA+AGG | - | tig0031945:31502-31521 | Msa1447830:CDS | 40.0% | |
| ATCCATTCCATTACTGTTGG+AGG | - | tig0031945:31574-31593 | Msa1447830:CDS | 40.0% | |
| ! | TTCCTCCAACAGTAATGGAA+TGG | + | tig0031945:31579-31598 | Msa1447830:intergenic | 40.0% |
| TCTTGTTCCTCCAACAGTAA+TGG | + | tig0031945:31584-31603 | Msa1447830:intergenic | 40.0% | |
| ATTACTGTTGGAGGAACAAG+AGG | - | tig0031945:31583-31602 | Msa1447830:CDS | 40.0% | |
| ! | ACTTCCGTGATTTCTCCTTT+TGG | + | tig0031945:29466-29485 | Msa1447830:intergenic | 40.0% |
| ! | CTCTATGCTCCCAATTTTGT+AGG | - | tig0031945:29569-29588 | Msa1447830:CDS | 40.0% |
| !! | GATTTGCTGAACCTGAAACA+TGG | - | tig0031945:29597-29616 | Msa1447830:CDS | 40.0% |
| TTGTCTTTAGGCCATGTTTC+AGG | + | tig0031945:29611-29630 | Msa1447830:intergenic | 40.0% | |
| ATGGCCTAAAGACAAAAGAG+AGG | - | tig0031945:29616-29635 | Msa1447830:intron | 40.0% | |
| ! | ATGGTGCGAGCTTTGTATAT+TGG | + | tig0031945:30116-30135 | Msa1447830:intergenic | 40.0% |
| ! | TACCTATAATGGGGGTTATC+AGG | - | tig0031945:30231-30250 | Msa1447830:intron | 40.0% |
| AGGAATTAGTTCACCGCTAT+TGG | + | tig0031945:31148-31167 | Msa1447830:intergenic | 40.0% | |
| !! | TATGGTTGGTTCGAATGGTA+AGG | + | tig0031945:31168-31187 | Msa1447830:intergenic | 40.0% |
| CTAGGTAGGTTAAGAATGTG+AGG | - | tig0031945:31418-31437 | Msa1447830:CDS | 40.0% | |
| !!! | GACTTTTTAGGTGTGATCCT+TGG | - | tig0031945:31441-31460 | Msa1447830:CDS | 40.0% |
| TTGGGAATCTCACCTTAAGA+GGG | + | tig0031945:31478-31497 | Msa1447830:intergenic | 40.0% | |
| TGGACACTTGGAAAAGTCTT+GGG | + | tig0031945:31496-31515 | Msa1447830:intergenic | 40.0% | |
| TTTCCAAGTGTCCACTCAAA+AGG | - | tig0031945:31502-31521 | Msa1447830:CDS | 40.0% | |
| ATCCATTCCATTACTGTTGG+AGG | - | tig0031945:31574-31593 | Msa1447830:CDS | 40.0% | |
| ! | TTCCTCCAACAGTAATGGAA+TGG | + | tig0031945:31579-31598 | Msa1447830:intergenic | 40.0% |
| TCTTGTTCCTCCAACAGTAA+TGG | + | tig0031945:31584-31603 | Msa1447830:intergenic | 40.0% | |
| ATTACTGTTGGAGGAACAAG+AGG | - | tig0031945:31583-31602 | Msa1447830:CDS | 40.0% | |
| GGGTCGTGGAAGAATATCTA+TGG | - | tig0031945:29433-29452 | Msa1447830:CDS | 45.0% | |
| TGAAGTGGCCAAAACCCTAA+GGG | + | tig0031945:30058-30077 | Msa1447830:intergenic | 45.0% | |
| TTGAAGTGGCCAAAACCCTA+AGG | + | tig0031945:30059-30078 | Msa1447830:intergenic | 45.0% | |
| TATACAAAGCTCGCACCATG+TGG | - | tig0031945:30117-30136 | Msa1447830:intron | 45.0% | |
| GTCCTGATAACCCCCATTAT+AGG | + | tig0031945:30236-30255 | Msa1447830:intergenic | 45.0% | |
| CGGGCTTCCCAAAATCAATA+TGG | - | tig0031945:30264-30283 | Msa1447830:intron | 45.0% | |
| AAGGAAGGATGGAGCTGAAA+AGG | - | tig0031945:30288-30307 | Msa1447830:intron | 45.0% | |
| ! | GGAAAGTGTGCAAGGCAATA+GGG | + | tig0031945:30369-30388 | Msa1447830:intergenic | 45.0% |
| ! | CTGAAAAGGGAAAGTGTGCA+AGG | + | tig0031945:30377-30396 | Msa1447830:intergenic | 45.0% |
| ATCGAGCTCATGACCAATAG+CGG | - | tig0031945:31132-31151 | Msa1447830:CDS | 45.0% | |
| TGGGAATCTCACCTTAAGAG+GGG | + | tig0031945:31477-31496 | Msa1447830:intergenic | 45.0% | |
| CTTGGGAATCTCACCTTAAG+AGG | + | tig0031945:31479-31498 | Msa1447830:intergenic | 45.0% | |
| GTGGACACTTGGAAAAGTCT+TGG | + | tig0031945:31497-31516 | Msa1447830:intergenic | 45.0% | |
| !! | CTTCCTTTTGAGTGGACACT+TGG | + | tig0031945:31508-31527 | Msa1447830:intergenic | 45.0% |
| TACTGCTACGCAACAAGTTC+TGG | + | tig0031945:31538-31557 | Msa1447830:intergenic | 45.0% | |
| ! | GGATATGTCTATCTGGGATG+AGG | - | tig0031945:31604-31623 | Msa1447830:CDS | 45.0% |
| GGGTCGTGGAAGAATATCTA+TGG | - | tig0031945:29433-29452 | Msa1447830:CDS | 45.0% | |
| TGAAGTGGCCAAAACCCTAA+GGG | + | tig0031945:30058-30077 | Msa1447830:intergenic | 45.0% | |
| TTGAAGTGGCCAAAACCCTA+AGG | + | tig0031945:30059-30078 | Msa1447830:intergenic | 45.0% | |
| TATACAAAGCTCGCACCATG+TGG | - | tig0031945:30117-30136 | Msa1447830:intron | 45.0% | |
| GTCCTGATAACCCCCATTAT+AGG | + | tig0031945:30236-30255 | Msa1447830:intergenic | 45.0% | |
| CGGGCTTCCCAAAATCAATA+TGG | - | tig0031945:30264-30283 | Msa1447830:intron | 45.0% | |
| AAGGAAGGATGGAGCTGAAA+AGG | - | tig0031945:30288-30307 | Msa1447830:intron | 45.0% | |
| ! | GGAAAGTGTGCAAGGCAATA+GGG | + | tig0031945:30369-30388 | Msa1447830:intergenic | 45.0% |
| ! | CTGAAAAGGGAAAGTGTGCA+AGG | + | tig0031945:30377-30396 | Msa1447830:intergenic | 45.0% |
| ATCGAGCTCATGACCAATAG+CGG | - | tig0031945:31132-31151 | Msa1447830:CDS | 45.0% | |
| TGGGAATCTCACCTTAAGAG+GGG | + | tig0031945:31477-31496 | Msa1447830:intergenic | 45.0% | |
| CTTGGGAATCTCACCTTAAG+AGG | + | tig0031945:31479-31498 | Msa1447830:intergenic | 45.0% | |
| GTGGACACTTGGAAAAGTCT+TGG | + | tig0031945:31497-31516 | Msa1447830:intergenic | 45.0% | |
| !! | CTTCCTTTTGAGTGGACACT+TGG | + | tig0031945:31508-31527 | Msa1447830:intergenic | 45.0% |
| TACTGCTACGCAACAAGTTC+TGG | + | tig0031945:31538-31557 | Msa1447830:intergenic | 45.0% | |
| ! | GGATATGTCTATCTGGGATG+AGG | - | tig0031945:31604-31623 | Msa1447830:CDS | 45.0% |
| ! | GCTCCCAATTTTGTAGGTCG+TGG | - | tig0031945:29575-29594 | Msa1447830:CDS | 50.0% |
| GAAGTGGCCAAAACCCTAAG+GGG | + | tig0031945:30057-30076 | Msa1447830:intergenic | 50.0% | |
| !! | AGGGTTTTGGCCACTTCAAC+CGG | - | tig0031945:30060-30079 | Msa1447830:intron | 50.0% |
| ! | GAAGGTTGAGAGCTTTGTCC+CGG | + | tig0031945:30082-30101 | Msa1447830:intergenic | 50.0% |
| GGTTATCAGGACCGATGCTT+CGG | - | tig0031945:30244-30263 | Msa1447830:intron | 50.0% | |
| GTTATCAGGACCGATGCTTC+GGG | - | tig0031945:30245-30264 | Msa1447830:intron | 50.0% | |
| !! | TTTTGGGAAGCCCGAAGCAT+CGG | + | tig0031945:30258-30277 | Msa1447830:intergenic | 50.0% |
| ! | GGGAAAGTGTGCAAGGCAAT+AGG | + | tig0031945:30370-30389 | Msa1447830:intergenic | 50.0% |
| ! | ATCTGGGATGAGGAGATGCA+TGG | - | tig0031945:31614-31633 | Msa1447830:CDS | 50.0% |
| ! | GCTCCCAATTTTGTAGGTCG+TGG | - | tig0031945:29575-29594 | Msa1447830:CDS | 50.0% |
| GAAGTGGCCAAAACCCTAAG+GGG | + | tig0031945:30057-30076 | Msa1447830:intergenic | 50.0% | |
| !! | AGGGTTTTGGCCACTTCAAC+CGG | - | tig0031945:30060-30079 | Msa1447830:intron | 50.0% |
| ! | GAAGGTTGAGAGCTTTGTCC+CGG | + | tig0031945:30082-30101 | Msa1447830:intergenic | 50.0% |
| GGTTATCAGGACCGATGCTT+CGG | - | tig0031945:30244-30263 | Msa1447830:intron | 50.0% | |
| GTTATCAGGACCGATGCTTC+GGG | - | tig0031945:30245-30264 | Msa1447830:intron | 50.0% | |
| !! | TTTTGGGAAGCCCGAAGCAT+CGG | + | tig0031945:30258-30277 | Msa1447830:intergenic | 50.0% |
| ! | GGGAAAGTGTGCAAGGCAAT+AGG | + | tig0031945:30370-30389 | Msa1447830:intergenic | 50.0% |
| ! | ATCTGGGATGAGGAGATGCA+TGG | - | tig0031945:31614-31633 | Msa1447830:CDS | 50.0% |
| !! | GGGTTTTGGCCACTTCAACC+GGG | - | tig0031945:30061-30080 | Msa1447830:intron | 55.0% |
| ! | GAGCTTTGTCCCGGTTGAAG+TGG | + | tig0031945:30073-30092 | Msa1447830:intergenic | 55.0% |
| CACCATGTGGAGTCTGAGGA+GGG | - | tig0031945:30130-30149 | Msa1447830:intron | 55.0% | |
| TACCCTCCTCAGACTCCACA+TGG | + | tig0031945:30135-30154 | Msa1447830:intergenic | 55.0% | |
| TGGGGCTAATTGGGCCAATC+AGG | - | tig0031945:30195-30214 | Msa1447830:intron | 55.0% | |
| GGTGTCTGCTACCCCTCTTA+AGG | - | tig0031945:31463-31482 | Msa1447830:CDS | 55.0% | |
| !! | GGGTTTTGGCCACTTCAACC+GGG | - | tig0031945:30061-30080 | Msa1447830:intron | 55.0% |
| ! | GAGCTTTGTCCCGGTTGAAG+TGG | + | tig0031945:30073-30092 | Msa1447830:intergenic | 55.0% |
| CACCATGTGGAGTCTGAGGA+GGG | - | tig0031945:30130-30149 | Msa1447830:intron | 55.0% | |
| TACCCTCCTCAGACTCCACA+TGG | + | tig0031945:30135-30154 | Msa1447830:intergenic | 55.0% | |
| TGGGGCTAATTGGGCCAATC+AGG | - | tig0031945:30195-30214 | Msa1447830:intron | 55.0% | |
| GGTGTCTGCTACCCCTCTTA+AGG | - | tig0031945:31463-31482 | Msa1447830:CDS | 55.0% | |
| CTCGCACCATGTGGAGTCTG+AGG | - | tig0031945:30126-30145 | Msa1447830:intron | 60.0% | |
| GCACCATGTGGAGTCTGAGG+AGG | - | tig0031945:30129-30148 | Msa1447830:intron | 60.0% | |
| AGAGGGGTAGCAGACACCCA+AGG | + | tig0031945:31461-31480 | Msa1447830:intergenic | 60.0% | |
| CTCGCACCATGTGGAGTCTG+AGG | - | tig0031945:30126-30145 | Msa1447830:intron | 60.0% | |
| GCACCATGTGGAGTCTGAGG+AGG | - | tig0031945:30129-30148 | Msa1447830:intron | 60.0% | |
| AGAGGGGTAGCAGACACCCA+AGG | + | tig0031945:31461-31480 | Msa1447830:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0031945 | gene | 29431 | 31643 | 29431 | ID=Msa1447830;Name=Msa1447830 |
| tig0031945 | mRNA | 29431 | 31643 | 29431 | ID=Msa1447830-mRNA-1;Parent=Msa1447830;Name=Msa1447830-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|0.5|1|1|2|0|415 |
| tig0031945 | exon | 30589 | 31643 | 30589 | ID=Msa1447830-mRNA-1:exon:16103;Parent=Msa1447830-mRNA-1 |
| tig0031945 | exon | 29431 | 29623 | 29431 | ID=Msa1447830-mRNA-1:exon:16102;Parent=Msa1447830-mRNA-1 |
| tig0031945 | CDS | 30589 | 31643 | 30589 | ID=Msa1447830-mRNA-1:cds;Parent=Msa1447830-mRNA-1 |
| tig0031945 | CDS | 29431 | 29623 | 29431 | ID=Msa1447830-mRNA-1:cds;Parent=Msa1447830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
