Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454650 | sp|Q6X7K0|WOX1_ARATH | 53.659 | 123 | 45 | 2 | 6 | 125 | 74 | 187 | 3.77e-35 | 127 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454650 | A0A072UYB2 | 94.737 | 133 | 2 | 1 | 1 | 133 | 57 | 184 | 3.26e-86 | 258 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1454650 | TF | HB-WOX |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454650 | MtrunA17_Chr4g0043891 | 92.800 | 125 | 2 | 2 | 1 | 125 | 1 | 118 | 3.47e-78 | 231 |
| Msa1454650 | MtrunA17_Chr8g0392991 | 60.345 | 116 | 35 | 3 | 6 | 121 | 94 | 198 | 3.71e-37 | 129 |
| Msa1454650 | MtrunA17_Chr7g0238431 | 71.429 | 70 | 20 | 0 | 1 | 70 | 1 | 70 | 1.10e-31 | 111 |
| Msa1454650 | MtrunA17_Chr5g0436661 | 39.552 | 134 | 71 | 2 | 8 | 131 | 33 | 166 | 3.01e-28 | 102 |
| Msa1454650 | MtrunA17_Chr5g0405351 | 67.164 | 67 | 21 | 1 | 4 | 69 | 26 | 92 | 2.02e-27 | 102 |
| Msa1454650 | MtrunA17_Chr1g0153171 | 68.750 | 64 | 20 | 0 | 7 | 70 | 89 | 152 | 8.67e-27 | 99.8 |
| Msa1454650 | MtrunA17_Chr8g0385441 | 84.615 | 52 | 8 | 0 | 19 | 70 | 93 | 144 | 1.43e-26 | 97.4 |
| Msa1454650 | MtrunA17_Chr3g0125111 | 84.615 | 52 | 8 | 0 | 19 | 70 | 91 | 142 | 1.55e-26 | 97.4 |
| Msa1454650 | MtrunA17_Chr4g0031341 | 66.667 | 63 | 21 | 0 | 8 | 70 | 25 | 87 | 5.19e-26 | 98.2 |
| Msa1454650 | MtrunA17_Chr7g0223471 | 47.761 | 67 | 35 | 0 | 3 | 69 | 42 | 108 | 1.60e-18 | 80.1 |
| Msa1454650 | MtrunA17_Chr1g0212511 | 46.341 | 82 | 38 | 1 | 8 | 89 | 85 | 160 | 3.25e-18 | 77.8 |
| Msa1454650 | MtrunA17_Chr2g0283141 | 44.928 | 69 | 38 | 0 | 3 | 71 | 50 | 118 | 6.92e-18 | 78.6 |
| Msa1454650 | MtrunA17_Chr3g0144021 | 42.623 | 61 | 35 | 0 | 8 | 68 | 82 | 142 | 8.29e-14 | 65.5 |
| Msa1454650 | MtrunA17_Chr6g0460691 | 38.961 | 77 | 47 | 0 | 7 | 83 | 31 | 107 | 2.71e-13 | 65.1 |
| Msa1454650 | MtrunA17_Chr7g0222981 | 36.559 | 93 | 49 | 1 | 8 | 100 | 68 | 150 | 4.39e-13 | 62.8 |
| Msa1454650 | MtrunA17_Chr7g0254251 | 45.098 | 51 | 28 | 0 | 7 | 57 | 27 | 77 | 5.03e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454650 | AT3G18010.1 | 53.659 | 123 | 45 | 2 | 6 | 125 | 74 | 187 | 3.84e-36 | 127 |
| Msa1454650 | AT2G28610.1 | 65.714 | 70 | 24 | 0 | 1 | 70 | 1 | 70 | 5.82e-30 | 108 |
| Msa1454650 | AT5G59340.1 | 64.706 | 68 | 24 | 0 | 6 | 73 | 12 | 79 | 1.14e-27 | 103 |
| Msa1454650 | AT3G11260.1 | 59.701 | 67 | 27 | 0 | 8 | 74 | 24 | 90 | 1.03e-26 | 98.6 |
| Msa1454650 | AT2G17950.1 | 60.759 | 79 | 30 | 1 | 4 | 81 | 34 | 112 | 1.82e-26 | 100 |
| Msa1454650 | AT1G46480.2 | 63.768 | 69 | 24 | 1 | 2 | 70 | 85 | 152 | 2.91e-26 | 97.8 |
| Msa1454650 | AT2G01500.1 | 74.545 | 55 | 14 | 0 | 8 | 62 | 61 | 115 | 7.01e-26 | 98.6 |
| Msa1454650 | AT1G46480.1 | 63.768 | 69 | 24 | 1 | 2 | 70 | 85 | 152 | 1.36e-25 | 97.4 |
| Msa1454650 | AT5G05770.1 | 59.375 | 64 | 26 | 0 | 8 | 71 | 29 | 92 | 1.59e-23 | 88.6 |
| Msa1454650 | AT2G33880.1 | 44.286 | 70 | 39 | 0 | 3 | 72 | 50 | 119 | 2.04e-17 | 77.4 |
| Msa1454650 | AT2G33880.2 | 44.286 | 70 | 39 | 0 | 3 | 72 | 50 | 119 | 2.67e-17 | 77.0 |
| Msa1454650 | AT5G45980.1 | 44.776 | 67 | 37 | 0 | 3 | 69 | 50 | 116 | 4.59e-16 | 73.2 |
| Msa1454650 | AT4G35550.1 | 48.387 | 62 | 32 | 0 | 8 | 69 | 99 | 160 | 8.59e-16 | 71.6 |
| Msa1454650 | AT1G20700.2 | 45.000 | 60 | 33 | 0 | 8 | 67 | 33 | 92 | 2.44e-14 | 65.9 |
| Msa1454650 | AT1G20700.3 | 45.000 | 60 | 33 | 0 | 8 | 67 | 95 | 154 | 8.45e-14 | 65.5 |
| Msa1454650 | AT1G20700.1 | 45.000 | 60 | 33 | 0 | 8 | 67 | 95 | 154 | 1.04e-13 | 65.5 |
| Msa1454650 | AT3G03660.1 | 49.057 | 53 | 27 | 0 | 7 | 59 | 32 | 84 | 3.58e-13 | 64.7 |
| Msa1454650 | AT3G03660.2 | 49.057 | 53 | 27 | 0 | 7 | 59 | 32 | 84 | 5.44e-13 | 64.3 |
| Msa1454650 | AT3G03660.4 | 49.057 | 53 | 27 | 0 | 7 | 59 | 32 | 84 | 7.95e-13 | 63.9 |
| Msa1454650 | AT3G03660.3 | 49.057 | 53 | 27 | 0 | 7 | 59 | 32 | 84 | 1.09e-12 | 63.9 |
| Msa1454650 | AT5G17810.1 | 43.396 | 53 | 30 | 0 | 7 | 59 | 20 | 72 | 2.14e-11 | 59.7 |
| Msa1454650 | AT5G17810.2 | 43.396 | 53 | 30 | 0 | 7 | 59 | 20 | 72 | 2.14e-11 | 59.7 |
| Msa1454650 | AT5G17810.3 | 43.396 | 53 | 30 | 0 | 7 | 59 | 20 | 72 | 2.26e-11 | 59.7 |
Find 28 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCTCTCGCCTTGTGATTC+TGG | 0.194023 | tig0035337:+22822 | None:intergenic |
| GCTTCGCAGCTTCGACAATT+TGG | 0.206061 | tig0035337:-22878 | Msa1454650:CDS |
| ATTTCTCTTGTCTTTGTTGA+TGG | 0.263889 | tig0035337:-22125 | None:intergenic |
| AGAGAAAGAGAAGTACGTTA+TGG | 0.359866 | tig0035337:-22735 | Msa1454650:CDS |
| CGACAATTTGGAAAGATTGA+AGG | 0.396848 | tig0035337:-22866 | Msa1454650:CDS |
| GAGAAAGAGAAGTACGTTAT+GGG | 0.401887 | tig0035337:-22734 | Msa1454650:CDS |
| GAAGCTGCGAAGCTATTTGT+TGG | 0.428703 | tig0035337:+22888 | None:intergenic |
| CTTGCCTATACAATTCTTCA+AGG | 0.428836 | tig0035337:+22939 | None:intergenic |
| TAGTCCTTGAAGAATTGTAT+AGG | 0.431151 | tig0035337:-22943 | Msa1454650:CDS |
| GTTGGACTCCACCTTGAACT+TGG | 0.444756 | tig0035337:+22980 | None:intergenic |
| CTTGAGATGGAGGAAACAAT+TGG | 0.464032 | tig0035337:-22782 | Msa1454650:CDS |
| TGCATCCTCAACCAAGTTCA+AGG | 0.472729 | tig0035337:-22991 | Msa1454650:CDS |
| CTCCACCTTGAACTTGGTTG+AGG | 0.502185 | tig0035337:+22986 | None:intergenic |
| TGTTGGATTTGTTCAGCTGA+TGG | 0.503667 | tig0035337:+22905 | None:intergenic |
| TTGTTCACTGCAGTTTGAAG+TGG | 0.506780 | tig0035337:+22161 | None:intergenic |
| TCAAGGACTAGTAATTGAAC+TGG | 0.509163 | tig0035337:+22956 | None:intergenic |
| GAAGCGTCGTCGCCTTGAGA+TGG | 0.530642 | tig0035337:-22795 | Msa1454650:CDS |
| ACTAGTAATTGAACTGGTGT+TGG | 0.537149 | tig0035337:+22962 | None:intergenic |
| CTTGAAGAATTGTATAGGCA+AGG | 0.540070 | tig0035337:-22938 | Msa1454650:CDS |
| TCAGAAAAGCAAGAAGCTGC+AGG | 0.540109 | tig0035337:-22707 | Msa1454650:intron |
| CAATTGTTTCCTCCATCTCA+AGG | 0.548253 | tig0035337:+22783 | None:intergenic |
| GCGTCGTCGCCTTGAGATGG+AGG | 0.576407 | tig0035337:-22792 | Msa1454650:CDS |
| TTGAAGAATTGTATAGGCAA+GGG | 0.590766 | tig0035337:-22937 | Msa1454650:CDS |
| AAACTGCAGTGAACAAGCAG+AGG | 0.632631 | tig0035337:-22154 | Msa1454650:CDS |
| AGTTAAAGAGACAAAGAAGT+GGG | 0.667079 | tig0035337:-22187 | Msa1454650:CDS |
| CTATTGGTTCCAGAATCACA+AGG | 0.685006 | tig0035337:-22831 | Msa1454650:CDS |
| GAGTTAAAGAGACAAAGAAG+TGG | 0.689037 | tig0035337:-22188 | Msa1454650:CDS |
| ATCCTCAACCAAGTTCAAGG+TGG | 0.762805 | tig0035337:-22988 | Msa1454650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTTTTCTTTCAAATA+TGG | + | tig0035337:22759-22778 | None:intergenic | 10.0% |
| !!! | AAATTTTTTTCTTTCAAATA+TGG | + | tig0035337:22759-22778 | None:intergenic | 10.0% |
| !!! | TTGTTGTTTATTCAATTTAA+TGG | - | tig0035337:22780-22799 | Msa1454650:CDS | 15.0% |
| !!! | ATTGCTATTTTTGAAATTTT+AGG | - | tig0035337:22811-22830 | Msa1454650:CDS | 15.0% |
| !!! | TTGTTGTTTATTCAATTTAA+TGG | - | tig0035337:22780-22799 | Msa1454650:CDS | 15.0% |
| !!! | ATTGCTATTTTTGAAATTTT+AGG | - | tig0035337:22811-22830 | Msa1454650:CDS | 15.0% |
| !! | TCATGAGTGAAATATAATAT+AGG | + | tig0035337:22497-22516 | None:intergenic | 20.0% |
| !!! | AAAGATAAATAGCTTTTGTA+AGG | - | tig0035337:22553-22572 | Msa1454650:intron | 20.0% |
| !! | AGAAAAAAAAATGACCAAAT+GGG | + | tig0035337:22619-22638 | None:intergenic | 20.0% |
| !! | AAGAAAAAAAAATGACCAAA+TGG | + | tig0035337:22620-22639 | None:intergenic | 20.0% |
| !!! | CTAAAATCTCTAAAATTGTA+GGG | + | tig0035337:22652-22671 | None:intergenic | 20.0% |
| !!! | ACTATACTTTTAAAGATGTT+AGG | + | tig0035337:22735-22754 | None:intergenic | 20.0% |
| !! | TCATGAGTGAAATATAATAT+AGG | + | tig0035337:22497-22516 | None:intergenic | 20.0% |
| !!! | AAAGATAAATAGCTTTTGTA+AGG | - | tig0035337:22553-22572 | Msa1454650:intron | 20.0% |
| !! | AGAAAAAAAAATGACCAAAT+GGG | + | tig0035337:22619-22638 | None:intergenic | 20.0% |
| !! | AAGAAAAAAAAATGACCAAA+TGG | + | tig0035337:22620-22639 | None:intergenic | 20.0% |
| !!! | CTAAAATCTCTAAAATTGTA+GGG | + | tig0035337:22652-22671 | None:intergenic | 20.0% |
| !!! | ACTATACTTTTAAAGATGTT+AGG | + | tig0035337:22735-22754 | None:intergenic | 20.0% |
| ! | AAGGAAAAAATGTGTTCTAT+TGG | - | tig0035337:22273-22292 | Msa1454650:intron | 25.0% |
| ! | TACAGCTAGATATTATCTTT+AGG | - | tig0035337:22438-22457 | Msa1454650:intron | 25.0% |
| ! | ACAGCTAGATATTATCTTTA+GGG | - | tig0035337:22439-22458 | Msa1454650:intron | 25.0% |
| !!! | ATTATCTTTAGGGTTATTCA+AGG | - | tig0035337:22449-22468 | Msa1454650:intron | 25.0% |
| ! | AAATATCAATTTAGCCCATT+TGG | - | tig0035337:22602-22621 | Msa1454650:intron | 25.0% |
| !!! | CCTAAAATCTCTAAAATTGT+AGG | + | tig0035337:22653-22672 | None:intergenic | 25.0% |
| !!! | CCTACAATTTTAGAGATTTT+AGG | - | tig0035337:22650-22669 | Msa1454650:intron | 25.0% |
| ! | TCAATATGATATTCTTGCAT+AGG | - | tig0035337:22704-22723 | Msa1454650:intron | 25.0% |
| !! | ATGTATATGAGTTGAATTTG+TGG | - | tig0035337:22880-22899 | Msa1454650:CDS | 25.0% |
| ! | AAGGAAAAAATGTGTTCTAT+TGG | - | tig0035337:22273-22292 | Msa1454650:intron | 25.0% |
| ! | TACAGCTAGATATTATCTTT+AGG | - | tig0035337:22438-22457 | Msa1454650:intron | 25.0% |
| ! | ACAGCTAGATATTATCTTTA+GGG | - | tig0035337:22439-22458 | Msa1454650:intron | 25.0% |
| !!! | ATTATCTTTAGGGTTATTCA+AGG | - | tig0035337:22449-22468 | Msa1454650:intron | 25.0% |
| ! | AAATATCAATTTAGCCCATT+TGG | - | tig0035337:22602-22621 | Msa1454650:intron | 25.0% |
| !!! | CCTAAAATCTCTAAAATTGT+AGG | + | tig0035337:22653-22672 | None:intergenic | 25.0% |
| !!! | CCTACAATTTTAGAGATTTT+AGG | - | tig0035337:22650-22669 | Msa1454650:intron | 25.0% |
| ! | TCAATATGATATTCTTGCAT+AGG | - | tig0035337:22704-22723 | Msa1454650:intron | 25.0% |
| !! | ATGTATATGAGTTGAATTTG+TGG | - | tig0035337:22880-22899 | Msa1454650:CDS | 25.0% |
| TAGTCCTTGAAGAATTGTAT+AGG | - | tig0035337:22177-22196 | Msa1454650:CDS | 30.0% | |
| TTGAAGAATTGTATAGGCAA+GGG | - | tig0035337:22183-22202 | Msa1454650:CDS | 30.0% | |
| ! | GTTATTCAAGGTTCTTTTAG+TGG | - | tig0035337:22461-22480 | Msa1454650:intron | 30.0% |
| ! | AATAGCTTTTGTAAGGATCT+CGG | - | tig0035337:22560-22579 | Msa1454650:intron | 30.0% |
| ACACACACTTCAAATTGTAA+GGG | + | tig0035337:22850-22869 | None:intergenic | 30.0% | |
| AGTTAAAGAGACAAAGAAGT+GGG | - | tig0035337:22933-22952 | Msa1454650:CDS | 30.0% | |
| TAGTCCTTGAAGAATTGTAT+AGG | - | tig0035337:22177-22196 | Msa1454650:CDS | 30.0% | |
| TTGAAGAATTGTATAGGCAA+GGG | - | tig0035337:22183-22202 | Msa1454650:CDS | 30.0% | |
| ! | GTTATTCAAGGTTCTTTTAG+TGG | - | tig0035337:22461-22480 | Msa1454650:intron | 30.0% |
| ! | AATAGCTTTTGTAAGGATCT+CGG | - | tig0035337:22560-22579 | Msa1454650:intron | 30.0% |
| ACACACACTTCAAATTGTAA+GGG | + | tig0035337:22850-22869 | None:intergenic | 30.0% | |
| AGTTAAAGAGACAAAGAAGT+GGG | - | tig0035337:22933-22952 | Msa1454650:CDS | 30.0% | |
| ACTAGTAATTGAACTGGTGT+TGG | + | tig0035337:22161-22180 | None:intergenic | 35.0% | |
| ! | TCAAGGACTAGTAATTGAAC+TGG | + | tig0035337:22167-22186 | None:intergenic | 35.0% |
| CTTGCCTATACAATTCTTCA+AGG | + | tig0035337:22184-22203 | None:intergenic | 35.0% | |
| CTTGAAGAATTGTATAGGCA+AGG | - | tig0035337:22182-22201 | Msa1454650:CDS | 35.0% | |
| CGACAATTTGGAAAGATTGA+AGG | - | tig0035337:22254-22273 | Msa1454650:intron | 35.0% | |
| ! | AGAGAAAGAGAAGTACGTTA+TGG | - | tig0035337:22385-22404 | Msa1454650:intron | 35.0% |
| ! | GAGAAAGAGAAGTACGTTAT+GGG | - | tig0035337:22386-22405 | Msa1454650:intron | 35.0% |
| CACACACACTTCAAATTGTA+AGG | + | tig0035337:22851-22870 | None:intergenic | 35.0% | |
| ! | TGAGTTGAATTTGTGGTGAT+TGG | - | tig0035337:22887-22906 | Msa1454650:CDS | 35.0% |
| !! | GATTGGATTTTGAAAGAGAC+AGG | - | tig0035337:22904-22923 | Msa1454650:CDS | 35.0% |
| GAGTTAAAGAGACAAAGAAG+TGG | - | tig0035337:22932-22951 | Msa1454650:CDS | 35.0% | |
| ACTAGTAATTGAACTGGTGT+TGG | + | tig0035337:22161-22180 | None:intergenic | 35.0% | |
| ! | TCAAGGACTAGTAATTGAAC+TGG | + | tig0035337:22167-22186 | None:intergenic | 35.0% |
| CTTGCCTATACAATTCTTCA+AGG | + | tig0035337:22184-22203 | None:intergenic | 35.0% | |
| CTTGAAGAATTGTATAGGCA+AGG | - | tig0035337:22182-22201 | Msa1454650:CDS | 35.0% | |
| CGACAATTTGGAAAGATTGA+AGG | - | tig0035337:22254-22273 | Msa1454650:intron | 35.0% | |
| ! | AGAGAAAGAGAAGTACGTTA+TGG | - | tig0035337:22385-22404 | Msa1454650:intron | 35.0% |
| ! | GAGAAAGAGAAGTACGTTAT+GGG | - | tig0035337:22386-22405 | Msa1454650:intron | 35.0% |
| CACACACACTTCAAATTGTA+AGG | + | tig0035337:22851-22870 | None:intergenic | 35.0% | |
| ! | TGAGTTGAATTTGTGGTGAT+TGG | - | tig0035337:22887-22906 | Msa1454650:CDS | 35.0% |
| !! | GATTGGATTTTGAAAGAGAC+AGG | - | tig0035337:22904-22923 | Msa1454650:CDS | 35.0% |
| GAGTTAAAGAGACAAAGAAG+TGG | - | tig0035337:22932-22951 | Msa1454650:CDS | 35.0% | |
| ! | TGTTGGATTTGTTCAGCTGA+TGG | + | tig0035337:22218-22237 | None:intergenic | 40.0% |
| !! | CTATTGGTTCCAGAATCACA+AGG | - | tig0035337:22289-22308 | Msa1454650:intron | 40.0% |
| CAATTGTTTCCTCCATCTCA+AGG | + | tig0035337:22340-22359 | None:intergenic | 40.0% | |
| CTTGAGATGGAGGAAACAAT+TGG | - | tig0035337:22338-22357 | Msa1454650:intron | 40.0% | |
| !! | TGGATTTTGAAAGAGACAGG+TGG | - | tig0035337:22907-22926 | Msa1454650:CDS | 40.0% |
| !! | ATTTTGAAAGAGACAGGTGG+TGG | - | tig0035337:22910-22929 | Msa1454650:CDS | 40.0% |
| TTGTTCACTGCAGTTTGAAG+TGG | + | tig0035337:22962-22981 | None:intergenic | 40.0% | |
| ! | TGTTGGATTTGTTCAGCTGA+TGG | + | tig0035337:22218-22237 | None:intergenic | 40.0% |
| !! | CTATTGGTTCCAGAATCACA+AGG | - | tig0035337:22289-22308 | Msa1454650:intron | 40.0% |
| CAATTGTTTCCTCCATCTCA+AGG | + | tig0035337:22340-22359 | None:intergenic | 40.0% | |
| CTTGAGATGGAGGAAACAAT+TGG | - | tig0035337:22338-22357 | Msa1454650:intron | 40.0% | |
| !! | TGGATTTTGAAAGAGACAGG+TGG | - | tig0035337:22907-22926 | Msa1454650:CDS | 40.0% |
| !! | ATTTTGAAAGAGACAGGTGG+TGG | - | tig0035337:22910-22929 | Msa1454650:CDS | 40.0% |
| TTGTTCACTGCAGTTTGAAG+TGG | + | tig0035337:22962-22981 | None:intergenic | 40.0% | |
| TGCATCCTCAACCAAGTTCA+AGG | - | tig0035337:22129-22148 | Msa1454650:CDS | 45.0% | |
| ATCCTCAACCAAGTTCAAGG+TGG | - | tig0035337:22132-22151 | Msa1454650:CDS | 45.0% | |
| GAAGCTGCGAAGCTATTTGT+TGG | + | tig0035337:22235-22254 | None:intergenic | 45.0% | |
| TCAGAAAAGCAAGAAGCTGC+AGG | - | tig0035337:22413-22432 | Msa1454650:intron | 45.0% | |
| AAACTGCAGTGAACAAGCAG+AGG | - | tig0035337:22966-22985 | Msa1454650:CDS | 45.0% | |
| TGCATCCTCAACCAAGTTCA+AGG | - | tig0035337:22129-22148 | Msa1454650:CDS | 45.0% | |
| ATCCTCAACCAAGTTCAAGG+TGG | - | tig0035337:22132-22151 | Msa1454650:CDS | 45.0% | |
| GAAGCTGCGAAGCTATTTGT+TGG | + | tig0035337:22235-22254 | None:intergenic | 45.0% | |
| TCAGAAAAGCAAGAAGCTGC+AGG | - | tig0035337:22413-22432 | Msa1454650:intron | 45.0% | |
| AAACTGCAGTGAACAAGCAG+AGG | - | tig0035337:22966-22985 | Msa1454650:CDS | 45.0% | |
| CTCCACCTTGAACTTGGTTG+AGG | + | tig0035337:22137-22156 | None:intergenic | 50.0% | |
| GTTGGACTCCACCTTGAACT+TGG | + | tig0035337:22143-22162 | None:intergenic | 50.0% | |
| GCTTCGCAGCTTCGACAATT+TGG | - | tig0035337:22242-22261 | Msa1454650:intron | 50.0% | |
| CTCCACCTTGAACTTGGTTG+AGG | + | tig0035337:22137-22156 | None:intergenic | 50.0% | |
| GTTGGACTCCACCTTGAACT+TGG | + | tig0035337:22143-22162 | None:intergenic | 50.0% | |
| GCTTCGCAGCTTCGACAATT+TGG | - | tig0035337:22242-22261 | Msa1454650:intron | 50.0% | |
| GCTCTCTCGCCTTGTGATTC+TGG | + | tig0035337:22301-22320 | None:intergenic | 55.0% | |
| GCTCTCTCGCCTTGTGATTC+TGG | + | tig0035337:22301-22320 | None:intergenic | 55.0% | |
| !! | GAAGCGTCGTCGCCTTGAGA+TGG | - | tig0035337:22325-22344 | Msa1454650:intron | 60.0% |
| !! | GAAGCGTCGTCGCCTTGAGA+TGG | - | tig0035337:22325-22344 | Msa1454650:intron | 60.0% |
| GCGTCGTCGCCTTGAGATGG+AGG | - | tig0035337:22328-22347 | Msa1454650:intron | 65.0% | |
| GCGTCGTCGCCTTGAGATGG+AGG | - | tig0035337:22328-22347 | Msa1454650:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0035337 | gene | 22128 | 23014 | 22128 | ID=Msa1454650;Name=Msa1454650 |
| tig0035337 | mRNA | 22128 | 23014 | 22128 | ID=Msa1454650-mRNA-1;Parent=Msa1454650;Name=Msa1454650-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0|0|1|1|1|2|0|133 |
| tig0035337 | exon | 22708 | 23014 | 22708 | ID=Msa1454650-mRNA-1:exon:19885;Parent=Msa1454650-mRNA-1 |
| tig0035337 | exon | 22128 | 22222 | 22128 | ID=Msa1454650-mRNA-1:exon:19884;Parent=Msa1454650-mRNA-1 |
| tig0035337 | CDS | 22708 | 23014 | 22708 | ID=Msa1454650-mRNA-1:cds;Parent=Msa1454650-mRNA-1 |
| tig0035337 | CDS | 22128 | 22222 | 22128 | ID=Msa1454650-mRNA-1:cds;Parent=Msa1454650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
