Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454830 | sp|A2X1N2|ORR24_ORYSI | 49.085 | 328 | 138 | 7 | 3 | 301 | 23 | 350 | 9.53e-89 | 285 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454830 | A0A072U4L8 | 75.820 | 488 | 43 | 10 | 1 | 440 | 1 | 461 | 0.0 | 654 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1454830 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454830 | MtrunA17_Chr1g0149851 | 58.523 | 528 | 116 | 14 | 1 | 426 | 1 | 527 | 7.44e-179 | 510 |
| Msa1454830 | MtrunA17_Chr7g0275891 | 75.637 | 353 | 32 | 7 | 1 | 311 | 1 | 341 | 1.16e-161 | 459 |
| Msa1454830 | MtrunA17_Chr1g0149841 | 57.290 | 487 | 108 | 11 | 1 | 388 | 1 | 486 | 8.89e-157 | 452 |
| Msa1454830 | MtrunA17_Chr7g0275401 | 60.772 | 311 | 74 | 6 | 1 | 291 | 1 | 283 | 4.32e-112 | 331 |
| Msa1454830 | MtrunA17_Chr3g0137101 | 57.778 | 315 | 107 | 6 | 3 | 294 | 6 | 317 | 7.11e-104 | 322 |
| Msa1454830 | MtrunA17_Chr1g0149831 | 75.648 | 193 | 29 | 3 | 61 | 238 | 1 | 190 | 5.25e-83 | 254 |
| Msa1454830 | MtrunA17_Chr2g0304841 | 43.782 | 386 | 163 | 12 | 3 | 342 | 16 | 393 | 4.18e-78 | 256 |
| Msa1454830 | MtrunA17_Chr4g0074411 | 43.363 | 339 | 160 | 8 | 5 | 321 | 18 | 346 | 1.01e-69 | 232 |
| Msa1454830 | MtrunA17_Chr4g0067981 | 47.405 | 289 | 118 | 7 | 2 | 260 | 28 | 312 | 4.77e-68 | 229 |
| Msa1454830 | MtrunA17_Chr2g0294911 | 48.047 | 256 | 113 | 3 | 1 | 239 | 25 | 277 | 5.89e-68 | 227 |
| Msa1454830 | MtrunA17_Chr4g0074401 | 40.000 | 365 | 157 | 11 | 3 | 326 | 15 | 358 | 1.94e-65 | 220 |
| Msa1454830 | MtrunA17_Chr1g0161431 | 45.627 | 263 | 108 | 6 | 4 | 238 | 10 | 265 | 9.86e-64 | 216 |
| Msa1454830 | MtrunA17_Chr3g0123131 | 46.768 | 263 | 112 | 5 | 5 | 244 | 13 | 270 | 4.65e-63 | 213 |
| Msa1454830 | MtrunA17_Chr8g0376881 | 47.368 | 266 | 98 | 7 | 3 | 239 | 23 | 275 | 5.80e-61 | 207 |
| Msa1454830 | MtrunA17_Chr4g0074421 | 50.549 | 182 | 86 | 2 | 52 | 233 | 2 | 179 | 2.19e-51 | 172 |
| Msa1454830 | MtrunA17_Chr7g0275881 | 86.598 | 97 | 11 | 2 | 336 | 430 | 2 | 98 | 3.05e-50 | 166 |
| Msa1454830 | MtrunA17_Chr3g0134461 | 46.186 | 236 | 72 | 3 | 2 | 233 | 5 | 189 | 1.63e-49 | 167 |
| Msa1454830 | MtrunA17_Chr3g0134481 | 62.791 | 129 | 45 | 1 | 2 | 127 | 5 | 133 | 2.99e-44 | 153 |
| Msa1454830 | MtrunA17_Chr4g0009851 | 33.591 | 259 | 126 | 7 | 5 | 246 | 11 | 240 | 5.17e-37 | 137 |
| Msa1454830 | MtrunA17_Chr4g0009901 | 33.878 | 245 | 118 | 6 | 2 | 229 | 7 | 224 | 2.17e-35 | 132 |
| Msa1454830 | MtrunA17_Chr4g0009981 | 33.971 | 209 | 96 | 5 | 47 | 241 | 2 | 182 | 1.21e-28 | 113 |
| Msa1454830 | MtrunA17_Chr6g0471041 | 32.906 | 234 | 125 | 6 | 4 | 233 | 13 | 218 | 6.94e-28 | 114 |
| Msa1454830 | MtrunA17_Chr8g0391911 | 28.634 | 227 | 144 | 6 | 5 | 221 | 9 | 227 | 1.10e-20 | 91.3 |
| Msa1454830 | MtrunA17_Chr4g0011071 | 30.303 | 165 | 89 | 3 | 49 | 213 | 36 | 174 | 5.50e-20 | 87.0 |
| Msa1454830 | MtrunA17_Chr8g0350761 | 28.452 | 239 | 143 | 8 | 8 | 222 | 20 | 254 | 8.03e-19 | 88.6 |
| Msa1454830 | MtrunA17_Chr6g0456631 | 34.646 | 127 | 77 | 3 | 3 | 124 | 7 | 132 | 3.33e-18 | 82.0 |
| Msa1454830 | MtrunA17_Chr8g0383961 | 33.871 | 124 | 79 | 1 | 4 | 124 | 13 | 136 | 2.76e-16 | 78.6 |
| Msa1454830 | MtrunA17_Chr3g0091641 | 29.518 | 166 | 107 | 3 | 9 | 168 | 24 | 185 | 5.34e-16 | 80.1 |
| Msa1454830 | MtrunA17_Chr4g0009991 | 34.884 | 129 | 57 | 4 | 94 | 222 | 1 | 102 | 1.47e-15 | 73.2 |
| Msa1454830 | MtrunA17_Chr8g0345901 | 30.952 | 168 | 99 | 4 | 11 | 161 | 38 | 205 | 2.86e-15 | 78.2 |
| Msa1454830 | MtrunA17_Chr6g0473731 | 27.684 | 177 | 89 | 5 | 82 | 239 | 10 | 166 | 3.45e-15 | 77.4 |
| Msa1454830 | MtrunA17_Chr3g0127941 | 30.935 | 139 | 88 | 3 | 9 | 140 | 56 | 193 | 3.81e-15 | 77.8 |
| Msa1454830 | MtrunA17_Chr7g0276361 | 30.000 | 190 | 104 | 6 | 2 | 179 | 5 | 177 | 1.02e-14 | 76.3 |
| Msa1454830 | MtrunA17_Chr4g0061021 | 27.711 | 166 | 110 | 3 | 9 | 168 | 33 | 194 | 2.71e-14 | 75.1 |
| Msa1454830 | MtrunA17_Chr1g0181811 | 31.967 | 122 | 77 | 3 | 9 | 124 | 85 | 206 | 1.99e-12 | 69.3 |
| Msa1454830 | MtrunA17_Chr4g0030271 | 32.787 | 122 | 76 | 2 | 9 | 124 | 89 | 210 | 4.45e-12 | 68.2 |
| Msa1454830 | MtrunA17_Chr4g0031961 | 41.176 | 85 | 34 | 2 | 161 | 229 | 103 | 187 | 1.91e-11 | 65.1 |
| Msa1454830 | MtrunA17_Chr7g0223971 | 25.701 | 214 | 89 | 6 | 85 | 243 | 2 | 200 | 5.01e-11 | 64.7 |
| Msa1454830 | MtrunA17_Chr5g0400241 | 34.400 | 125 | 73 | 4 | 5 | 124 | 14 | 134 | 6.54e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454830 | AT2G25180.1 | 51.582 | 316 | 115 | 8 | 3 | 288 | 11 | 318 | 2.21e-83 | 268 |
| Msa1454830 | AT4G31920.1 | 46.418 | 349 | 125 | 9 | 3 | 311 | 11 | 337 | 1.36e-80 | 259 |
| Msa1454830 | AT3G16857.1 | 38.120 | 383 | 152 | 11 | 3 | 329 | 31 | 384 | 2.25e-66 | 224 |
| Msa1454830 | AT3G16857.2 | 38.120 | 383 | 152 | 11 | 3 | 329 | 31 | 384 | 5.44e-66 | 224 |
| Msa1454830 | AT5G58080.1 | 44.615 | 325 | 125 | 11 | 3 | 291 | 12 | 317 | 7.19e-64 | 217 |
| Msa1454830 | AT2G01760.1 | 43.007 | 286 | 137 | 6 | 1 | 261 | 3 | 287 | 1.19e-62 | 207 |
| Msa1454830 | AT2G01760.2 | 40.127 | 314 | 134 | 7 | 1 | 261 | 3 | 315 | 2.46e-58 | 197 |
| Msa1454830 | AT1G67710.1 | 46.850 | 254 | 108 | 6 | 6 | 236 | 8 | 257 | 7.80e-58 | 198 |
| Msa1454830 | AT3G16857.3 | 38.012 | 342 | 130 | 10 | 41 | 329 | 2 | 314 | 3.92e-57 | 199 |
| Msa1454830 | AT2G01760.3 | 40.807 | 223 | 109 | 5 | 61 | 261 | 1 | 222 | 6.63e-41 | 148 |
| Msa1454830 | AT1G67710.2 | 45.641 | 195 | 82 | 5 | 61 | 235 | 1 | 191 | 1.40e-39 | 148 |
| Msa1454830 | AT3G62670.1 | 35.217 | 230 | 127 | 8 | 10 | 232 | 42 | 256 | 7.05e-33 | 129 |
| Msa1454830 | AT5G49240.1 | 33.184 | 223 | 140 | 4 | 5 | 221 | 38 | 257 | 1.01e-32 | 125 |
| Msa1454830 | AT1G67710.3 | 39.429 | 175 | 82 | 5 | 81 | 235 | 12 | 182 | 1.24e-25 | 108 |
| Msa1454830 | AT1G49190.1 | 29.020 | 255 | 131 | 7 | 4 | 232 | 29 | 259 | 2.21e-25 | 107 |
| Msa1454830 | AT1G49190.2 | 36.000 | 125 | 77 | 1 | 4 | 125 | 29 | 153 | 5.70e-19 | 90.1 |
| Msa1454830 | AT5G07210.2 | 24.706 | 340 | 191 | 13 | 7 | 295 | 14 | 339 | 2.01e-16 | 82.0 |
| Msa1454830 | AT2G46790.1 | 35.772 | 123 | 71 | 3 | 9 | 124 | 37 | 158 | 2.67e-16 | 81.3 |
| Msa1454830 | AT2G46790.3 | 35.772 | 123 | 71 | 3 | 9 | 124 | 37 | 158 | 2.71e-16 | 81.3 |
| Msa1454830 | AT5G07210.1 | 24.713 | 348 | 189 | 14 | 7 | 295 | 14 | 347 | 1.20e-15 | 79.7 |
| Msa1454830 | AT5G61380.1 | 28.916 | 166 | 108 | 3 | 9 | 168 | 19 | 180 | 5.34e-15 | 77.8 |
| Msa1454830 | AT5G24470.1 | 32.812 | 128 | 78 | 3 | 7 | 127 | 48 | 174 | 3.99e-14 | 74.7 |
| Msa1454830 | AT5G60100.7 | 33.858 | 127 | 77 | 3 | 5 | 124 | 59 | 185 | 5.83e-13 | 70.9 |
| Msa1454830 | AT5G60100.6 | 33.858 | 127 | 77 | 3 | 5 | 124 | 59 | 185 | 5.83e-13 | 70.9 |
| Msa1454830 | AT5G60100.4 | 33.858 | 127 | 77 | 3 | 5 | 124 | 59 | 185 | 5.83e-13 | 70.9 |
| Msa1454830 | AT5G60100.5 | 33.858 | 127 | 77 | 3 | 5 | 124 | 59 | 185 | 6.90e-13 | 70.9 |
| Msa1454830 | AT5G60100.3 | 33.858 | 127 | 77 | 3 | 5 | 124 | 59 | 185 | 6.90e-13 | 70.9 |
| Msa1454830 | AT5G60100.1 | 33.858 | 127 | 77 | 3 | 5 | 124 | 59 | 185 | 6.90e-13 | 70.9 |
| Msa1454830 | AT5G60100.2 | 33.858 | 127 | 77 | 3 | 5 | 124 | 59 | 185 | 9.18e-13 | 70.5 |
| Msa1454830 | AT5G02810.1 | 31.967 | 122 | 77 | 2 | 9 | 124 | 78 | 199 | 1.98e-12 | 69.7 |
| Msa1454830 | AT5G59570.2 | 37.363 | 91 | 43 | 1 | 167 | 243 | 121 | 211 | 1.10e-11 | 65.9 |
| Msa1454830 | AT5G59570.1 | 37.363 | 91 | 43 | 1 | 167 | 243 | 121 | 211 | 1.10e-11 | 65.9 |
Find 83 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCTCTTTACATGGAAAA+AGG | 0.209902 | tig0035450:-15793 | Msa1454830:CDS |
| GGAAGGTAAGAATTTGTTTC+AGG | 0.212805 | tig0035450:+15737 | None:intergenic |
| CTTGCTGTTGTTAATCAATT+AGG | 0.232624 | tig0035450:-16783 | Msa1454830:CDS |
| TACCAATCACATGATTATTA+TGG | 0.258074 | tig0035450:+15657 | None:intergenic |
| TGATTTGGCAACATGTAATT+AGG | 0.275585 | tig0035450:-17037 | Msa1454830:CDS |
| CCATTTCCACTATCAAAATT+AGG | 0.281786 | tig0035450:+16978 | None:intergenic |
| TTGAGCAAAACTCTTCTTGA+TGG | 0.285117 | tig0035450:+14472 | None:intergenic |
| TATCTGAAAGGAATTAGTTC+TGG | 0.286831 | tig0035450:-16070 | Msa1454830:CDS |
| ATGAATGATCAGTTTCCTAT+TGG | 0.311031 | tig0035450:-18240 | Msa1454830:CDS |
| ATGAAAAGCCAACTAGAAAA+AGG | 0.314880 | tig0035450:-16920 | Msa1454830:CDS |
| GCCTCATGTGGTTTCTTTGA+AGG | 0.325335 | tig0035450:+15584 | None:intergenic |
| CATAAATTATATTACCTGTT+TGG | 0.347407 | tig0035450:+15475 | None:intergenic |
| TGAAAGAGGTACAGATGATT+TGG | 0.347739 | tig0035450:-17052 | Msa1454830:CDS |
| CATGTGATTGGTAGTTCAAT+AGG | 0.356360 | tig0035450:-15647 | Msa1454830:CDS |
| GGCATTCTTTGAACATGGTT+CGG | 0.368479 | tig0035450:+15851 | None:intergenic |
| TTTAATTGCATAGAAATTGT+TGG | 0.369454 | tig0035450:-17534 | Msa1454830:intron |
| GTTCGGATTGGCGTGAGCTT+TGG | 0.373257 | tig0035450:+15868 | None:intergenic |
| TTTAAGCTTCTTGAGCTTGT+TGG | 0.375182 | tig0035450:-17268 | Msa1454830:CDS |
| TGAGAGGCTACAGAAGAAAT+TGG | 0.392769 | tig0035450:+15830 | None:intergenic |
| GAGAACTGAATCTTGCTTGT+TGG | 0.396623 | tig0035450:+16041 | None:intergenic |
| AACCATAATAATCATGTGAT+TGG | 0.416988 | tig0035450:-15659 | Msa1454830:CDS |
| ATTCCTTTCATCACCATCCT+TGG | 0.417097 | tig0035450:+17116 | None:intergenic |
| AGAAGAAGCCTCGAGTTGTT+TGG | 0.418038 | tig0035450:-16830 | Msa1454830:CDS |
| CGAGGCTTCTTCTGTGCTGT+TGG | 0.425164 | tig0035450:+16840 | None:intergenic |
| AATCAAAGTGACAACAAGAT+TGG | 0.426152 | tig0035450:-14617 | Msa1454830:exon |
| CTGATTGAGAAGACAAAACT+TGG | 0.430217 | tig0035450:+14506 | None:intergenic |
| ATCTGAAAGGAATTAGTTCT+GGG | 0.433081 | tig0035450:-16069 | Msa1454830:CDS |
| ACTAGCAATGTGCCATTTCA+AGG | 0.436943 | tig0035450:-15692 | Msa1454830:CDS |
| GCAAGAACACGCATTCCAAT+AGG | 0.445918 | tig0035450:+18225 | None:intergenic |
| TGTACCTCTTTCAATGTGAC+AGG | 0.446657 | tig0035450:+17062 | None:intergenic |
| AATGGTCTAAAAGCACTGTT+AGG | 0.452029 | tig0035450:+15962 | None:intergenic |
| TGAGCTTGTTGGACTTGAGA+TGG | 0.457732 | tig0035450:-17257 | Msa1454830:CDS |
| AAACTTGCGGTGTAAGTCAT+TGG | 0.458916 | tig0035450:+16806 | None:intergenic |
| TTCAGTTCTCTCACTAGAGT+TGG | 0.460910 | tig0035450:-16028 | Msa1454830:CDS |
| TCTCGTTCAACATTTACAAC+AGG | 0.467597 | tig0035450:+15611 | None:intergenic |
| AGCTTAAATCCATCCATGTC+TGG | 0.471845 | tig0035450:+17283 | None:intergenic |
| CAATATGCATGGATTTCAAC+CGG | 0.482097 | tig0035450:-15891 | Msa1454830:CDS |
| AGACCATTTCCATCTGGTGG+TGG | 0.485592 | tig0035450:-15947 | Msa1454830:CDS |
| GGATAAGAATGATGATATTG+AGG | 0.489929 | tig0035450:-16895 | Msa1454830:CDS |
| CCATGCATATTGACACTAGC+AGG | 0.493898 | tig0035450:+15902 | None:intergenic |
| TTGTTGGATTCATTAGATCC+AGG | 0.494057 | tig0035450:-17518 | Msa1454830:CDS |
| ATACCACCACCAGATGGAAA+TGG | 0.500539 | tig0035450:+15944 | None:intergenic |
| TGACTTTGATGACGTCTTCG+AGG | 0.509927 | tig0035450:+15501 | None:intergenic |
| TTTAGACCATTTCCATCTGG+TGG | 0.515382 | tig0035450:-15950 | Msa1454830:CDS |
| TCTTTGAACATGGTTCGGAT+TGG | 0.518790 | tig0035450:+15856 | None:intergenic |
| CATCAAAGTCATGACCAAAC+AGG | 0.521398 | tig0035450:-15489 | Msa1454830:intron |
| GGATTGGCGTGAGCTTTGGC+CGG | 0.526522 | tig0035450:+15872 | None:intergenic |
| CAATTATATGCTAATTACTC+TGG | 0.530133 | tig0035450:-14645 | Msa1454830:CDS |
| GACTTTGATGACGTCTTCGA+GGG | 0.537259 | tig0035450:+15502 | None:intergenic |
| TATGAACATTACTGATTACA+AGG | 0.547400 | tig0035450:+17308 | None:intergenic |
| TTGTAAATGTTGAACGAGAA+GGG | 0.549447 | tig0035450:-15607 | Msa1454830:CDS |
| GAAACCTGTCACATTGAAAG+AGG | 0.553386 | tig0035450:-17066 | Msa1454830:CDS |
| CCTGCTAGTGTCAATATGCA+TGG | 0.555451 | tig0035450:-15902 | Msa1454830:CDS |
| CTCATCATATATGCCTCATG+TGG | 0.556475 | tig0035450:+15572 | None:intergenic |
| GTTGTAAATGTTGAACGAGA+AGG | 0.564050 | tig0035450:-15608 | Msa1454830:CDS |
| GCAATGTGCCATTTCAAGGA+TGG | 0.575878 | tig0035450:-15688 | Msa1454830:CDS |
| TATATGCTAATTACTCTGGT+GGG | 0.582478 | tig0035450:-14641 | Msa1454830:CDS |
| TTATATGCTAATTACTCTGG+TGG | 0.583480 | tig0035450:-14642 | Msa1454830:CDS |
| GTTCATATGCCAGACATGGA+TGG | 0.584384 | tig0035450:-17292 | Msa1454830:CDS |
| AAATTGGCATTCTTTGAACA+TGG | 0.589855 | tig0035450:+15846 | None:intergenic |
| GGTTCGTGCACTTTGAGCAG+TGG | 0.595278 | tig0035450:+17369 | None:intergenic |
| AAATATAGACTCTATCTGAA+AGG | 0.596380 | tig0035450:-16082 | Msa1454830:CDS |
| TTGCATAACTCACTTATGAC+AGG | 0.597051 | tig0035450:+17229 | None:intergenic |
| AAATTCTTACCTTCCACAAG+GGG | 0.600441 | tig0035450:-15729 | Msa1454830:CDS |
| CTACTCATACCACCACCAGA+TGG | 0.600621 | tig0035450:+15938 | None:intergenic |
| TAAGAATGATGATATTGAGG+AGG | 0.601304 | tig0035450:-16892 | Msa1454830:CDS |
| GTGATGAAAGGAATTGATCA+TGG | 0.607173 | tig0035450:-17107 | Msa1454830:CDS |
| TGATGATAGAACTTGTCTCA+AGG | 0.612252 | tig0035450:-18196 | Msa1454830:intron |
| CAAATTCTTACCTTCCACAA+GGG | 0.612572 | tig0035450:-15730 | Msa1454830:CDS |
| TAATGTTCATATGCCAGACA+TGG | 0.614385 | tig0035450:-17296 | Msa1454830:CDS |
| AGAAAACAGTGGATGTTGAG+AGG | 0.619813 | tig0035450:+15814 | None:intergenic |
| TTTCTGCAAATGATGATCCA+AGG | 0.640841 | tig0035450:-17133 | Msa1454830:CDS |
| GATCCAAGGATGGTGATGAA+AGG | 0.644591 | tig0035450:-17119 | Msa1454830:CDS |
| ACAAATTCTTACCTTCCACA+AGG | 0.649192 | tig0035450:-15731 | Msa1454830:CDS |
| ATATATGATGAGCAACAAGA+TGG | 0.653513 | tig0035450:-15561 | Msa1454830:CDS |
| TGCAAATGATGATCCAAGGA+TGG | 0.655257 | tig0035450:-17129 | Msa1454830:CDS |
| ATAACTCACTTATGACAGGT+AGG | 0.663328 | tig0035450:+17233 | None:intergenic |
| TGTAAAGAGCAAGAAAACAG+TGG | 0.667428 | tig0035450:+15803 | None:intergenic |
| TCATTGGACCAAACAACTCG+AGG | 0.676972 | tig0035450:+16822 | None:intergenic |
| TTCTCTCAACAAGTTCAATG+CGG | 0.677431 | tig0035450:+17348 | None:intergenic |
| GCCTTCAAAGAAACCACATG+AGG | 0.683194 | tig0035450:-15585 | Msa1454830:CDS |
| TCTGAAAGGAATTAGTTCTG+GGG | 0.683638 | tig0035450:-16068 | Msa1454830:CDS |
| TAACAACAGCAAGAAACTTG+CGG | 0.687001 | tig0035450:+16793 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATCTATTTTTTCTACATT+AGG | - | tig0035450:14898-14917 | Msa1454830:intron | 15.0% |
| !! | AAAATAATAAATCTAATCGT+TGG | + | tig0035450:15197-15216 | None:intergenic | 15.0% |
| !!! | ATATGATTATATCATTCTTT+TGG | + | tig0035450:17751-17770 | None:intergenic | 15.0% |
| !!! | AAACTTTAAAGATATATACA+TGG | + | tig0035450:17951-17970 | None:intergenic | 15.0% |
| !!! | TGCTGCTTAAATATTAAAAA+TGG | - | tig0035450:14540-14559 | Msa1454830:three_prime_UTR | 20.0% |
| !! | TATTAGATACAACATAGATT+CGG | - | tig0035450:14589-14608 | Msa1454830:three_prime_UTR | 20.0% |
| !!! | TTTTGTTCTTTAAATCCTTT+TGG | - | tig0035450:14690-14709 | Msa1454830:intron | 20.0% |
| !! | TATCAAAGAAAATTTAAGTC+TGG | + | tig0035450:14955-14974 | None:intergenic | 20.0% |
| !!! | AATTTTCTTTGATACTGTTT+AGG | - | tig0035450:14961-14980 | Msa1454830:intron | 20.0% |
| !! | TTTAATTGCATAGAAATTGT+TGG | - | tig0035450:15137-15156 | Msa1454830:intron | 20.0% |
| !!! | ATTTCATAGATTTTATGTTG+TGG | - | tig0035450:15226-15245 | Msa1454830:intron | 20.0% |
| !! | ATAAAGACGAATATATCAAT+TGG | + | tig0035450:15975-15994 | None:intergenic | 20.0% |
| !!! | ATCAATTCAAGAATCTTTTT+TGG | + | tig0035450:16253-16272 | None:intergenic | 20.0% |
| !! | CATAAATTATATTACCTGTT+TGG | + | tig0035450:17199-17218 | None:intergenic | 20.0% |
| !! | ATGTAATATAATCTAACGTA+TGG | - | tig0035450:17242-17261 | Msa1454830:CDS | 20.0% |
| !! | TATCGTCAAAAATCATATAA+TGG | - | tig0035450:17288-17307 | Msa1454830:CDS | 20.0% |
| !! | GTCAAAATCAATTATTGTTA+CGG | + | tig0035450:17328-17347 | None:intergenic | 20.0% |
| !! | AGAATGATATAATCATATAG+AGG | - | tig0035450:17753-17772 | Msa1454830:intron | 20.0% |
| !! | AATAATTAATTCGCTAAACT+TGG | - | tig0035450:17821-17840 | Msa1454830:intron | 20.0% |
| !!! | GTCAGTTTGTTTGTTTATTT+TGG | - | tig0035450:14800-14819 | Msa1454830:intron | 25.0% |
| !! | AATTGATTCATACAAAGCAT+TGG | + | tig0035450:14929-14948 | None:intergenic | 25.0% |
| ! | AATCTGTGAAAGAATTTGAT+CGG | + | tig0035450:15007-15026 | None:intergenic | 25.0% |
| !!! | TGTGATCTTATGTTGTTTTT+TGG | - | tig0035450:15104-15123 | Msa1454830:intron | 25.0% |
| !! | TATGAACATTACTGATTACA+AGG | + | tig0035450:15366-15385 | None:intergenic | 25.0% |
| ! | AAATGTATCAGTAACAAGAT+TGG | + | tig0035450:15472-15491 | None:intergenic | 25.0% |
| ! | TTGAATATGTTTGTTTGAGT+AGG | - | tig0035450:16009-16028 | Msa1454830:CDS | 25.0% |
| ! | TGAATGTTGAAAATCTTACA+AGG | - | tig0035450:16272-16291 | Msa1454830:intron | 25.0% |
| ! | GAATGTTGAAAATCTTACAA+GGG | - | tig0035450:16273-16292 | Msa1454830:intron | 25.0% |
| ! | TTAATTCACGAAAACTTACT+TGG | - | tig0035450:16534-16553 | Msa1454830:intron | 25.0% |
| ! | AAATATAGACTCTATCTGAA+AGG | - | tig0035450:16589-16608 | Msa1454830:intron | 25.0% |
| ! | AAAAAGGTTCAATGACATTT+GGG | - | tig0035450:16894-16913 | Msa1454830:CDS | 25.0% |
| !! | TTTTTATTCCATCCTTGAAA+TGG | + | tig0035450:16994-17013 | None:intergenic | 25.0% |
| ! | AACCATAATAATCATGTGAT+TGG | - | tig0035450:17012-17031 | Msa1454830:CDS | 25.0% |
| ! | TACCAATCACATGATTATTA+TGG | + | tig0035450:17017-17036 | None:intergenic | 25.0% |
| ! | TCAAGTAGAATCAATTATGA+AGG | - | tig0035450:17460-17479 | Msa1454830:intron | 25.0% |
| ! | AATATATACTTTACCTCGTT+TGG | - | tig0035450:17913-17932 | Msa1454830:intron | 25.0% |
| ! | CAATTATATGCTAATTACTC+TGG | - | tig0035450:18026-18045 | Msa1454830:intron | 25.0% |
| !!! | TCTAAACACATTCTTTTTCA+CGG | - | tig0035450:18228-18247 | Msa1454830:CDS | 25.0% |
| ATGAATGATCAGTTTCCTAT+TGG | - | tig0035450:14431-14450 | Msa1454830:three_prime_UTR | 30.0% | |
| AATCATATGTGTTTGTGTGT+AGG | - | tig0035450:14649-14668 | Msa1454830:CDS | 30.0% | |
| !!! | TTGTGACACAACTTTTTTGA+CGG | - | tig0035450:14829-14848 | Msa1454830:intron | 30.0% |
| ACACATATCTCCAAAACTTA+AGG | + | tig0035450:14870-14889 | None:intergenic | 30.0% | |
| ! | TCTTTGATACTGTTTAGGTT+CGG | - | tig0035450:14966-14985 | Msa1454830:intron | 30.0% |
| GATCAAATTCTTTCACAGAT+TGG | - | tig0035450:15006-15025 | Msa1454830:intron | 30.0% | |
| ! | TGATTTGGCAACATGTAATT+AGG | - | tig0035450:15634-15653 | Msa1454830:CDS | 30.0% |
| CCATTTCCACTATCAAAATT+AGG | + | tig0035450:15696-15715 | None:intergenic | 30.0% | |
| !!! | CCTAATTTTGATAGTGGAAA+TGG | - | tig0035450:15693-15712 | Msa1454830:CDS | 30.0% |
| ATGAAAAGCCAACTAGAAAA+AGG | - | tig0035450:15751-15770 | Msa1454830:CDS | 30.0% | |
| !! | TTATCCTTCCTTTTTCTAGT+TGG | + | tig0035450:15762-15781 | None:intergenic | 30.0% |
| GGATAAGAATGATGATATTG+AGG | - | tig0035450:15776-15795 | Msa1454830:CDS | 30.0% | |
| TAAGAATGATGATATTGAGG+AGG | - | tig0035450:15779-15798 | Msa1454830:CDS | 30.0% | |
| !! | CTTGCTGTTGTTAATCAATT+AGG | - | tig0035450:15888-15907 | Msa1454830:CDS | 30.0% |
| ATATCAATTGGATTGCTATG+AGG | + | tig0035450:15963-15982 | None:intergenic | 30.0% | |
| !! | TAATCATAGGAGAGTATTTG+AGG | + | tig0035450:16109-16128 | None:intergenic | 30.0% |
| TACTCTCCTATGATTAATCT+AGG | - | tig0035450:16113-16132 | Msa1454830:intron | 30.0% | |
| TTCACTCCTAGATTAATCAT+AGG | + | tig0035450:16122-16141 | None:intergenic | 30.0% | |
| TATCGAAAAACTTCATAGCA+CGG | + | tig0035450:16181-16200 | None:intergenic | 30.0% | |
| AAATCTTACAAGGGATAATG+TGG | - | tig0035450:16282-16301 | Msa1454830:intron | 30.0% | |
| AAGAGATAAAGAAAAACACC+TGG | + | tig0035450:16318-16337 | None:intergenic | 30.0% | |
| TATCTGAAAGGAATTAGTTC+TGG | - | tig0035450:16601-16620 | Msa1454830:intron | 30.0% | |
| ! | ATCTGAAAGGAATTAGTTCT+GGG | - | tig0035450:16602-16621 | Msa1454830:intron | 30.0% |
| AAATTGGCATTCTTTGAACA+TGG | + | tig0035450:16828-16847 | None:intergenic | 30.0% | |
| GAAAAAGGTTCAATGACATT+TGG | - | tig0035450:16893-16912 | Msa1454830:CDS | 30.0% | |
| TTGTAAATGTTGAACGAGAA+GGG | - | tig0035450:17064-17083 | Msa1454830:CDS | 30.0% | |
| ATATATGATGAGCAACAAGA+TGG | - | tig0035450:17110-17129 | Msa1454830:CDS | 30.0% | |
| ! | TTTGACAATAAGTGAGTTGA+AGG | - | tig0035450:17342-17361 | Msa1454830:CDS | 30.0% |
| !! | AAGGTAAAGTGTTTTGTGTT+TGG | - | tig0035450:17361-17380 | Msa1454830:CDS | 30.0% |
| TTTGTGTGAAAATCAATTCC+AGG | - | tig0035450:17414-17433 | Msa1454830:intron | 30.0% | |
| ! | ATTGATTCTACTTGAAGCTA+TGG | + | tig0035450:17455-17474 | None:intergenic | 30.0% |
| TAGTTGTACCTATCCATTAA+GGG | + | tig0035450:17579-17598 | None:intergenic | 30.0% | |
| ACGAATAAACCACATACTTA+CGG | + | tig0035450:17725-17744 | None:intergenic | 30.0% | |
| CATATAGAGGTAGCAATAAA+CGG | - | tig0035450:17766-17785 | Msa1454830:intron | 30.0% | |
| !!! | TGAATTTAGTTTTCAGCTCA+AGG | + | tig0035450:17868-17887 | None:intergenic | 30.0% |
| TTATATGCTAATTACTCTGG+TGG | - | tig0035450:18029-18048 | Msa1454830:intron | 30.0% | |
| TATATGCTAATTACTCTGGT+GGG | - | tig0035450:18030-18049 | Msa1454830:intron | 30.0% | |
| AATCAAAGTGACAACAAGAT+TGG | - | tig0035450:18054-18073 | Msa1454830:intron | 30.0% | |
| !! | CTAAACACATTCTTTTTCAC+GGG | - | tig0035450:18229-18248 | Msa1454830:CDS | 30.0% |
| TGATGATAGAACTTGTCTCA+AGG | - | tig0035450:14475-14494 | Msa1454830:three_prime_UTR | 35.0% | |
| ! | TAGAACTTGTCTCAAGGTTT+TGG | - | tig0035450:14481-14500 | Msa1454830:three_prime_UTR | 35.0% |
| TACAACATAGATTCGGACTT+CGG | - | tig0035450:14596-14615 | Msa1454830:three_prime_UTR | 35.0% | |
| ! | TCTTTAAATCCTTTTGGCCT+AGG | - | tig0035450:14696-14715 | Msa1454830:intron | 35.0% |
| TCATCATGATTACAATGCCT+AGG | + | tig0035450:14716-14735 | None:intergenic | 35.0% | |
| !!! | ACTTTTTTGACGGATCTTGA+TGG | - | tig0035450:14839-14858 | Msa1454830:intron | 35.0% |
| ! | GATGGTGTTTCCTTAAGTTT+TGG | - | tig0035450:14857-14876 | Msa1454830:intron | 35.0% |
| TTCACAGATTGGACATGATT+TGG | - | tig0035450:15017-15036 | Msa1454830:intron | 35.0% | |
| TTGTTGGATTCATTAGATCC+AGG | - | tig0035450:15153-15172 | Msa1454830:intron | 35.0% | |
| AAAAGAGTTGCATTACATCC+TGG | + | tig0035450:15174-15193 | None:intergenic | 35.0% | |
| TTCTCTCAACAAGTTCAATG+CGG | + | tig0035450:15326-15345 | None:intergenic | 35.0% | |
| TAATGTTCATATGCCAGACA+TGG | - | tig0035450:15375-15394 | Msa1454830:intron | 35.0% | |
| TTTAAGCTTCTTGAGCTTGT+TGG | - | tig0035450:15403-15422 | Msa1454830:intron | 35.0% | |
| ATAACTCACTTATGACAGGT+AGG | + | tig0035450:15441-15460 | None:intergenic | 35.0% | |
| TTGCATAACTCACTTATGAC+AGG | + | tig0035450:15445-15464 | None:intergenic | 35.0% | |
| TTTCTGCAAATGATGATCCA+AGG | - | tig0035450:15538-15557 | Msa1454830:CDS | 35.0% | |
| GTGATGAAAGGAATTGATCA+TGG | - | tig0035450:15564-15583 | Msa1454830:CDS | 35.0% | |
| ! | TGAAAGAGGTACAGATGATT+TGG | - | tig0035450:15619-15638 | Msa1454830:CDS | 35.0% |
| !! | GATGTGCCTAATTTTGATAG+TGG | - | tig0035450:15687-15706 | Msa1454830:CDS | 35.0% |
| AAAGCCAACTAGAAAAAGGA+AGG | - | tig0035450:15755-15774 | Msa1454830:CDS | 35.0% | |
| TAACAACAGCAAGAAACTTG+CGG | + | tig0035450:15881-15900 | None:intergenic | 35.0% | |
| TAAAGAAAAACACCTGGAGA+TGG | + | tig0035450:16312-16331 | None:intergenic | 35.0% | |
| !! | TCTGAAAGGAATTAGTTCTG+GGG | - | tig0035450:16603-16622 | Msa1454830:intron | 35.0% |
| !! | AATGGTCTAAAAGCACTGTT+AGG | + | tig0035450:16712-16731 | None:intergenic | 35.0% |
| CAATATGCATGGATTTCAAC+CGG | - | tig0035450:16780-16799 | Msa1454830:CDS | 35.0% | |
| TGTAAAGAGCAAGAAAACAG+TGG | + | tig0035450:16871-16890 | None:intergenic | 35.0% | |
| ! | CTGTTTTCTTGCTCTTTACA+TGG | - | tig0035450:16871-16890 | Msa1454830:CDS | 35.0% |
| CTTGCTCTTTACATGGAAAA+AGG | - | tig0035450:16878-16897 | Msa1454830:CDS | 35.0% | |
| ! | GGAAGGTAAGAATTTGTTTC+AGG | + | tig0035450:16937-16956 | None:intergenic | 35.0% |
| ACAAATTCTTACCTTCCACA+AGG | - | tig0035450:16940-16959 | Msa1454830:CDS | 35.0% | |
| CAAATTCTTACCTTCCACAA+GGG | - | tig0035450:16941-16960 | Msa1454830:CDS | 35.0% | |
| AAATTCTTACCTTCCACAAG+GGG | - | tig0035450:16942-16961 | Msa1454830:CDS | 35.0% | |
| TAAAAATAACCCCTTGTGGA+AGG | + | tig0035450:16954-16973 | None:intergenic | 35.0% | |
| CTGTTAAAAATAACCCCTTG+TGG | + | tig0035450:16958-16977 | None:intergenic | 35.0% | |
| ! | CATGTGATTGGTAGTTCAAT+AGG | - | tig0035450:17024-17043 | Msa1454830:CDS | 35.0% |
| TCTCGTTCAACATTTACAAC+AGG | + | tig0035450:17063-17082 | None:intergenic | 35.0% | |
| GTTGTAAATGTTGAACGAGA+AGG | - | tig0035450:17063-17082 | Msa1454830:CDS | 35.0% | |
| ! | AAGATAACACCTTCTAGAGA+GGG | + | tig0035450:17539-17558 | None:intergenic | 35.0% |
| ! | AAAGATAACACCTTCTAGAG+AGG | + | tig0035450:17540-17559 | None:intergenic | 35.0% |
| GTAGTTGTACCTATCCATTA+AGG | + | tig0035450:17580-17599 | None:intergenic | 35.0% | |
| ! | TAATGGATAGGTACAACTAC+AGG | - | tig0035450:17580-17599 | Msa1454830:intron | 35.0% |
| AATGGATAGGTACAACTACA+GGG | - | tig0035450:17581-17600 | Msa1454830:intron | 35.0% | |
| GTAAGTATGTGGTTTATTCG+TGG | - | tig0035450:17724-17743 | Msa1454830:intron | 35.0% | |
| GTTCCAACGTATATTTGAGT+TGG | + | tig0035450:17794-17813 | None:intergenic | 35.0% | |
| CTGATTGAGAAGACAAAACT+TGG | + | tig0035450:18168-18187 | None:intergenic | 35.0% | |
| TTGAGCAAAACTCTTCTTGA+TGG | + | tig0035450:18202-18221 | None:intergenic | 35.0% | |
| !! | TTTTGGAGAGACTTCTCCAA+AGG | - | tig0035450:14498-14517 | Msa1454830:three_prime_UTR | 40.0% |
| !! | TACCATGGTATTGACACCTT+TGG | + | tig0035450:14517-14536 | None:intergenic | 40.0% |
| ATTTAAGCAGCAGCATACCA+TGG | + | tig0035450:14532-14551 | None:intergenic | 40.0% | |
| ATTACAATGCCTAGGCCAAA+AGG | + | tig0035450:14708-14727 | None:intergenic | 40.0% | |
| !! | GATTCATACAAAGCATTGGC+TGG | + | tig0035450:14925-14944 | None:intergenic | 40.0% |
| AGCTTAAATCCATCCATGTC+TGG | + | tig0035450:15391-15410 | None:intergenic | 40.0% | |
| TGCAAATGATGATCCAAGGA+TGG | - | tig0035450:15542-15561 | Msa1454830:CDS | 40.0% | |
| ATTCCTTTCATCACCATCCT+TGG | + | tig0035450:15558-15577 | None:intergenic | 40.0% | |
| GAAACCTGTCACATTGAAAG+AGG | - | tig0035450:15605-15624 | Msa1454830:CDS | 40.0% | |
| TGTACCTCTTTCAATGTGAC+AGG | + | tig0035450:15612-15631 | None:intergenic | 40.0% | |
| AAACTTGCGGTGTAAGTCAT+TGG | + | tig0035450:15868-15887 | None:intergenic | 40.0% | |
| GAGAACTGAATCTTGCTTGT+TGG | + | tig0035450:16633-16652 | None:intergenic | 40.0% | |
| TTCAGTTCTCTCACTAGAGT+TGG | - | tig0035450:16643-16662 | Msa1454830:intron | 40.0% | |
| ! | GCTTTTAGACCATTTCCATC+TGG | - | tig0035450:16718-16737 | Msa1454830:intron | 40.0% |
| TTTAGACCATTTCCATCTGG+TGG | - | tig0035450:16721-16740 | Msa1454830:intron | 40.0% | |
| ! | TCTTTGAACATGGTTCGGAT+TGG | + | tig0035450:16818-16837 | None:intergenic | 40.0% |
| GGCATTCTTTGAACATGGTT+CGG | + | tig0035450:16823-16842 | None:intergenic | 40.0% | |
| TGAGAGGCTACAGAAGAAAT+TGG | + | tig0035450:16844-16863 | None:intergenic | 40.0% | |
| AGAAAACAGTGGATGTTGAG+AGG | + | tig0035450:16860-16879 | None:intergenic | 40.0% | |
| !! | ACTAGCAATGTGCCATTTCA+AGG | - | tig0035450:16979-16998 | Msa1454830:CDS | 40.0% |
| CTCATCATATATGCCTCATG+TGG | + | tig0035450:17102-17121 | None:intergenic | 40.0% | |
| CATCAAAGTCATGACCAAAC+AGG | - | tig0035450:17182-17201 | Msa1454830:intron | 40.0% | |
| CAATTTGTACCCTCTCTAGA+AGG | - | tig0035450:17527-17546 | Msa1454830:intron | 40.0% | |
| CATGATCGCAAAACCCTTAA+TGG | - | tig0035450:17563-17582 | Msa1454830:intron | 40.0% | |
| ! | TCGCAAAACCCTTAATGGAT+AGG | - | tig0035450:17568-17587 | Msa1454830:intron | 40.0% |
| !! | AAGGGTGTGTGTAATCCTTT+TGG | - | tig0035450:17617-17636 | Msa1454830:intron | 40.0% |
| CGATTAGACTCAAGTCCAAA+AGG | + | tig0035450:17635-17654 | None:intergenic | 40.0% | |
| !! | GTTGATAGAAGGTGTTGAGA+AGG | - | tig0035450:17662-17681 | Msa1454830:intron | 40.0% |
| GAGCCAACTCAAATATACGT+TGG | - | tig0035450:17788-17807 | Msa1454830:intron | 40.0% | |
| CAGCTCAAGGTCAATTCATT+TGG | + | tig0035450:17855-17874 | None:intergenic | 40.0% | |
| GTTTAATCGTGTACCAAACG+AGG | + | tig0035450:17929-17948 | None:intergenic | 40.0% | |
| GCAAGAACACGCATTCCAAT+AGG | + | tig0035450:14449-14468 | None:intergenic | 45.0% | |
| !! | CTCCAAAGGTGTCAATACCA+TGG | - | tig0035450:14512-14531 | Msa1454830:three_prime_UTR | 45.0% |
| GTTCATATGCCAGACATGGA+TGG | - | tig0035450:15379-15398 | Msa1454830:intron | 45.0% | |
| !! | TGAGCTTGTTGGACTTGAGA+TGG | - | tig0035450:15414-15433 | Msa1454830:intron | 45.0% |
| ! | GATCCAAGGATGGTGATGAA+AGG | - | tig0035450:15552-15571 | Msa1454830:CDS | 45.0% |
| ! | AGAAGAAGCCTCGAGTTGTT+TGG | - | tig0035450:15841-15860 | Msa1454830:CDS | 45.0% |
| TCATTGGACCAAACAACTCG+AGG | + | tig0035450:15852-15871 | None:intergenic | 45.0% | |
| GCACATGCACTTCAGATTGA+AGG | + | tig0035450:16495-16514 | None:intergenic | 45.0% | |
| ATACCACCACCAGATGGAAA+TGG | + | tig0035450:16730-16749 | None:intergenic | 45.0% | |
| CCATGCATATTGACACTAGC+AGG | + | tig0035450:16772-16791 | None:intergenic | 45.0% | |
| CCTGCTAGTGTCAATATGCA+TGG | - | tig0035450:16769-16788 | Msa1454830:intron | 45.0% | |
| !! | GCAATGTGCCATTTCAAGGA+TGG | - | tig0035450:16983-17002 | Msa1454830:CDS | 45.0% |
| GCCTTCAAAGAAACCACATG+AGG | - | tig0035450:17086-17105 | Msa1454830:CDS | 45.0% | |
| GCCTCATGTGGTTTCTTTGA+AGG | + | tig0035450:17090-17109 | None:intergenic | 45.0% | |
| !! | GACTTTGATGACGTCTTCGA+GGG | + | tig0035450:17172-17191 | None:intergenic | 45.0% |
| !! | TGACTTTGATGACGTCTTCG+AGG | + | tig0035450:17173-17192 | None:intergenic | 45.0% |
| ! | TGGTGTGTAGCTTTTGATCC+TGG | + | tig0035450:17435-17454 | None:intergenic | 45.0% |
| !! | ATCGTCTGCGAGTTGATAGA+AGG | - | tig0035450:17651-17670 | Msa1454830:intron | 45.0% |
| !! | GATAGAAGGTGTTGAGAAGG+AGG | - | tig0035450:17665-17684 | Msa1454830:intron | 45.0% |
| GAAAAACACCTGGAGATGGC+TGG | + | tig0035450:16308-16327 | None:intergenic | 50.0% | |
| AGACCATTTCCATCTGGTGG+TGG | - | tig0035450:16724-16743 | Msa1454830:intron | 50.0% | |
| CTACTCATACCACCACCAGA+TGG | + | tig0035450:16736-16755 | None:intergenic | 50.0% | |
| ACAGGGTGCATATCTTCGCA+AGG | - | tig0035450:17598-17617 | Msa1454830:intron | 50.0% | |
| CAGGGTGCATATCTTCGCAA+GGG | - | tig0035450:17599-17618 | Msa1454830:intron | 50.0% | |
| ATACTTACGGCTGACGAAGG+CGG | + | tig0035450:17712-17731 | None:intergenic | 50.0% | |
| CACATACTTACGGCTGACGA+AGG | + | tig0035450:17715-17734 | None:intergenic | 50.0% | |
| CTTCGTCAGCCGTAAGTATG+TGG | - | tig0035450:17713-17732 | Msa1454830:intron | 50.0% | |
| GGTTCGTGCACTTTGAGCAG+TGG | + | tig0035450:15305-15324 | None:intergenic | 55.0% | |
| CGAGGCTTCTTCTGTGCTGT+TGG | + | tig0035450:15834-15853 | None:intergenic | 55.0% | |
| TAATGTGGCCAGCCATCTCC+AGG | - | tig0035450:16297-16316 | Msa1454830:intron | 55.0% | |
| !! | GTTCGGATTGGCGTGAGCTT+TGG | + | tig0035450:16806-16825 | None:intergenic | 55.0% |
| ! | GGATTGGCGTGAGCTTTGGC+CGG | + | tig0035450:16802-16821 | None:intergenic | 60.0% |
| AGGAGGCCTCCGTCGTTGAT+CGG | - | tig0035450:17682-17701 | Msa1454830:intron | 60.0% | |
| GGATCGCCGATCAACGACGG+AGG | + | tig0035450:17691-17710 | None:intergenic | 65.0% | |
| GGCGGATCGCCGATCAACGA+CGG | + | tig0035450:17694-17713 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0035450 | gene | 14431 | 18262 | 14431 | ID=Msa1454830;Name=Msa1454830 |
| tig0035450 | mRNA | 14431 | 18262 | 14431 | ID=Msa1454830-mRNA-1;Parent=Msa1454830;Name=Msa1454830-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.16|0.14|0.85|0.66|0.71|7|198|440 |
| tig0035450 | exon | 14431 | 14670 | 14431 | ID=Msa1454830-mRNA-1:exon:19956;Parent=Msa1454830-mRNA-1 |
| tig0035450 | exon | 15490 | 16104 | 15490 | ID=Msa1454830-mRNA-1:exon:19955;Parent=Msa1454830-mRNA-1 |
| tig0035450 | exon | 16417 | 16451 | 16417 | ID=Msa1454830-mRNA-1:exon:19954;Parent=Msa1454830-mRNA-1 |
| tig0035450 | exon | 16775 | 17158 | 16775 | ID=Msa1454830-mRNA-1:exon:19953;Parent=Msa1454830-mRNA-1 |
| tig0035450 | exon | 17242 | 17394 | 17242 | ID=Msa1454830-mRNA-1:exon:19952;Parent=Msa1454830-mRNA-1 |
| tig0035450 | exon | 17516 | 17543 | 17516 | ID=Msa1454830-mRNA-1:exon:19951;Parent=Msa1454830-mRNA-1 |
| tig0035450 | exon | 18197 | 18262 | 18197 | ID=Msa1454830-mRNA-1:exon:19950;Parent=Msa1454830-mRNA-1 |
| tig0035450 | CDS | 18197 | 18262 | 18197 | ID=Msa1454830-mRNA-1:cds;Parent=Msa1454830-mRNA-1 |
| tig0035450 | CDS | 17516 | 17543 | 17516 | ID=Msa1454830-mRNA-1:cds;Parent=Msa1454830-mRNA-1 |
| tig0035450 | CDS | 17242 | 17394 | 17242 | ID=Msa1454830-mRNA-1:cds;Parent=Msa1454830-mRNA-1 |
| tig0035450 | CDS | 16775 | 17158 | 16775 | ID=Msa1454830-mRNA-1:cds;Parent=Msa1454830-mRNA-1 |
| tig0035450 | CDS | 16417 | 16451 | 16417 | ID=Msa1454830-mRNA-1:cds;Parent=Msa1454830-mRNA-1 |
| tig0035450 | CDS | 15490 | 16104 | 15490 | ID=Msa1454830-mRNA-1:cds;Parent=Msa1454830-mRNA-1 |
| tig0035450 | CDS | 14629 | 14670 | 14629 | ID=Msa1454830-mRNA-1:cds;Parent=Msa1454830-mRNA-1 |
| tig0035450 | three_prime_UTR | 14431 | 14628 | 14431 | ID=Msa1454830-mRNA-1:three_prime_utr;Parent=Msa1454830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
