Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1455880 | XP_013455021.2 | 68.199 | 261 | 61 | 1 | 1 | 239 | 1 | 261 | 3.19e-111 | 344 |
| Msa1455880 | XP_013455021.2 | 80.128 | 312 | 37 | 3 | 259 | 548 | 3 | 311 | 2.78e-174 | 504 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1455880 | sp|Q8L9Y3|ARR14_ARATH | 33.206 | 262 | 112 | 7 | 263 | 465 | 4 | 261 | 1.14e-35 | 140 |
| Msa1455880 | sp|Q8L9Y3|ARR14_ARATH | 42.667 | 150 | 82 | 3 | 7 | 154 | 4 | 151 | 6.26e-31 | 127 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1455880 | A0A396I0H3 | 56.329 | 316 | 98 | 6 | 1 | 282 | 1 | 310 | 2.67e-99 | 312 |
| Msa1455880 | A0A396I0H3 | 74.760 | 313 | 53 | 4 | 259 | 548 | 3 | 312 | 6.61e-160 | 467 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1455880 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1455880 | MtrunA17_Chr4g0009851 | 74.760 | 313 | 53 | 4 | 259 | 548 | 3 | 312 | 1.27e-163 | 467 |
| Msa1455880 | MtrunA17_Chr4g0009851 | 56.329 | 316 | 98 | 6 | 1 | 282 | 1 | 310 | 5.14e-103 | 312 |
| Msa1455880 | MtrunA17_Chr4g0009981 | 77.099 | 262 | 35 | 3 | 309 | 548 | 1 | 259 | 1.91e-139 | 404 |
| Msa1455880 | MtrunA17_Chr4g0009981 | 53.992 | 263 | 82 | 5 | 53 | 282 | 1 | 257 | 3.11e-76 | 241 |
| Msa1455880 | MtrunA17_Chr4g0009901 | 74.046 | 262 | 46 | 1 | 1 | 240 | 1 | 262 | 5.94e-132 | 385 |
| Msa1455880 | MtrunA17_Chr4g0009901 | 69.874 | 239 | 48 | 2 | 260 | 476 | 4 | 240 | 1.14e-105 | 318 |
| Msa1455880 | MtrunA17_Chr4g0011071 | 75.424 | 118 | 27 | 1 | 311 | 428 | 35 | 150 | 2.43e-55 | 184 |
| Msa1455880 | MtrunA17_Chr4g0011071 | 69.912 | 113 | 34 | 0 | 58 | 170 | 38 | 150 | 9.10e-51 | 172 |
| Msa1455880 | MtrunA17_Chr4g0010001 | 82.022 | 89 | 16 | 0 | 1 | 89 | 1 | 89 | 1.49e-47 | 160 |
| Msa1455880 | MtrunA17_Chr4g0010001 | 81.395 | 86 | 16 | 0 | 260 | 345 | 4 | 89 | 1.92e-46 | 157 |
| Msa1455880 | MtrunA17_Chr5g0423031 | 84.270 | 89 | 14 | 0 | 1 | 89 | 1 | 89 | 2.31e-47 | 163 |
| Msa1455880 | MtrunA17_Chr5g0423031 | 83.908 | 87 | 14 | 0 | 259 | 345 | 3 | 89 | 1.94e-45 | 158 |
| Msa1455880 | MtrunA17_Chr5g0423031 | 58.667 | 75 | 31 | 0 | 170 | 244 | 90 | 164 | 1.21e-14 | 72.4 |
| Msa1455880 | MtrunA17_Chr1g0161431 | 38.492 | 252 | 92 | 6 | 266 | 460 | 11 | 256 | 1.10e-45 | 170 |
| Msa1455880 | MtrunA17_Chr1g0161431 | 38.057 | 247 | 100 | 4 | 10 | 203 | 11 | 257 | 1.70e-45 | 169 |
| Msa1455880 | MtrunA17_Chr6g0471041 | 39.384 | 292 | 139 | 10 | 266 | 531 | 14 | 293 | 8.19e-44 | 160 |
| Msa1455880 | MtrunA17_Chr6g0471041 | 41.176 | 238 | 111 | 6 | 10 | 225 | 14 | 244 | 1.39e-41 | 154 |
| Msa1455880 | MtrunA17_Chr8g0383961 | 39.773 | 264 | 129 | 8 | 257 | 505 | 5 | 253 | 1.20e-42 | 153 |
| Msa1455880 | MtrunA17_Chr8g0383961 | 42.009 | 219 | 104 | 6 | 1 | 207 | 1 | 208 | 2.20e-38 | 141 |
| Msa1455880 | MtrunA17_Chr4g0009991 | 66.667 | 117 | 16 | 2 | 101 | 195 | 1 | 116 | 2.39e-42 | 147 |
| Msa1455880 | MtrunA17_Chr4g0009991 | 63.866 | 119 | 18 | 3 | 357 | 453 | 1 | 116 | 8.21e-37 | 132 |
| Msa1455880 | MtrunA17_Chr6g0456631 | 42.331 | 163 | 91 | 2 | 10 | 169 | 9 | 171 | 1.42e-37 | 136 |
| Msa1455880 | MtrunA17_Chr6g0456631 | 41.250 | 160 | 90 | 2 | 260 | 417 | 3 | 160 | 4.12e-35 | 129 |
| Msa1455880 | MtrunA17_Chr8g0376881 | 35.019 | 257 | 115 | 6 | 265 | 473 | 24 | 276 | 2.29e-37 | 145 |
| Msa1455880 | MtrunA17_Chr8g0376881 | 33.333 | 243 | 114 | 3 | 9 | 203 | 24 | 266 | 5.68e-35 | 138 |
| Msa1455880 | MtrunA17_Chr2g0294911 | 34.109 | 258 | 121 | 3 | 10 | 221 | 29 | 283 | 2.66e-37 | 145 |
| Msa1455880 | MtrunA17_Chr2g0294911 | 32.707 | 266 | 129 | 5 | 266 | 483 | 29 | 292 | 1.14e-34 | 138 |
| Msa1455880 | MtrunA17_Chr8g0391911 | 34.008 | 247 | 115 | 3 | 10 | 208 | 9 | 255 | 3.53e-37 | 138 |
| Msa1455880 | MtrunA17_Chr8g0391911 | 34.298 | 242 | 109 | 4 | 260 | 453 | 3 | 242 | 2.88e-36 | 135 |
| Msa1455880 | MtrunA17_Chr3g0123131 | 35.656 | 244 | 107 | 4 | 10 | 203 | 13 | 256 | 9.76e-37 | 144 |
| Msa1455880 | MtrunA17_Chr3g0123131 | 34.836 | 244 | 107 | 5 | 266 | 459 | 13 | 254 | 1.62e-36 | 143 |
| Msa1455880 | MtrunA17_Chr4g0067981 | 35.802 | 243 | 106 | 5 | 10 | 203 | 31 | 272 | 1.33e-36 | 144 |
| Msa1455880 | MtrunA17_Chr4g0067981 | 32.377 | 244 | 113 | 6 | 266 | 460 | 31 | 271 | 1.20e-31 | 129 |
| Msa1455880 | MtrunA17_Chr1g0149841 | 31.741 | 293 | 145 | 7 | 263 | 505 | 2 | 289 | 2.78e-32 | 130 |
| Msa1455880 | MtrunA17_Chr1g0149841 | 31.984 | 247 | 118 | 4 | 7 | 203 | 2 | 248 | 3.03e-30 | 124 |
| Msa1455880 | MtrunA17_Chr7g0275401 | 32.677 | 254 | 120 | 6 | 263 | 466 | 2 | 254 | 1.01e-30 | 121 |
| Msa1455880 | MtrunA17_Chr7g0275401 | 32.800 | 250 | 117 | 6 | 7 | 205 | 2 | 251 | 2.80e-30 | 120 |
| Msa1455880 | MtrunA17_Chr7g0275891 | 30.888 | 259 | 116 | 5 | 7 | 202 | 2 | 260 | 2.01e-30 | 122 |
| Msa1455880 | MtrunA17_Chr7g0275891 | 38.889 | 126 | 75 | 1 | 263 | 386 | 2 | 127 | 1.88e-25 | 107 |
| Msa1455880 | MtrunA17_Chr3g0137101 | 33.065 | 248 | 112 | 5 | 10 | 203 | 8 | 255 | 3.20e-30 | 125 |
| Msa1455880 | MtrunA17_Chr3g0137101 | 40.164 | 122 | 72 | 1 | 266 | 386 | 8 | 129 | 1.04e-23 | 105 |
| Msa1455880 | MtrunA17_Chr4g0074411 | 30.242 | 248 | 126 | 5 | 9 | 209 | 17 | 264 | 1.29e-27 | 117 |
| Msa1455880 | MtrunA17_Chr4g0074411 | 30.120 | 249 | 127 | 5 | 265 | 467 | 17 | 264 | 9.28e-27 | 114 |
| Msa1455880 | MtrunA17_Chr3g0134481 | 34.826 | 201 | 109 | 6 | 258 | 455 | 2 | 183 | 5.85e-27 | 107 |
| Msa1455880 | MtrunA17_Chr3g0134481 | 35.979 | 189 | 107 | 4 | 10 | 197 | 8 | 183 | 5.85e-27 | 107 |
| Msa1455880 | MtrunA17_Chr2g0304841 | 28.235 | 255 | 126 | 4 | 266 | 463 | 18 | 272 | 4.45e-26 | 112 |
| Msa1455880 | MtrunA17_Chr2g0304841 | 27.953 | 254 | 124 | 5 | 10 | 204 | 18 | 271 | 6.11e-25 | 109 |
| Msa1455880 | MtrunA17_Chr4g0074401 | 28.287 | 251 | 130 | 5 | 266 | 467 | 17 | 266 | 6.19e-26 | 112 |
| Msa1455880 | MtrunA17_Chr4g0074401 | 39.344 | 122 | 73 | 1 | 10 | 130 | 17 | 138 | 2.56e-23 | 103 |
| Msa1455880 | MtrunA17_Chr1g0149851 | 40.152 | 132 | 78 | 1 | 7 | 137 | 2 | 133 | 1.39e-25 | 110 |
| Msa1455880 | MtrunA17_Chr1g0149851 | 40.800 | 125 | 73 | 1 | 263 | 386 | 2 | 126 | 4.73e-25 | 108 |
| Msa1455880 | MtrunA17_Chr3g0134461 | 33.679 | 193 | 115 | 4 | 266 | 453 | 8 | 192 | 1.75e-23 | 98.2 |
| Msa1455880 | MtrunA17_Chr3g0134461 | 32.642 | 193 | 115 | 5 | 10 | 195 | 8 | 192 | 2.62e-20 | 89.0 |
| Msa1455880 | MtrunA17_Chr1g0149831 | 32.124 | 193 | 85 | 5 | 324 | 470 | 1 | 193 | 3.16e-18 | 84.0 |
| Msa1455880 | MtrunA17_Chr1g0149831 | 28.571 | 182 | 84 | 3 | 68 | 203 | 1 | 182 | 1.56e-16 | 79.0 |
| Msa1455880 | MtrunA17_Chr4g0074421 | 30.939 | 181 | 81 | 4 | 59 | 195 | 2 | 182 | 7.45e-18 | 82.0 |
| Msa1455880 | MtrunA17_Chr4g0074421 | 29.121 | 182 | 85 | 4 | 315 | 453 | 2 | 182 | 2.25e-17 | 80.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1455880 | AT2G01760.1 | 33.206 | 262 | 112 | 7 | 263 | 465 | 4 | 261 | 1.16e-36 | 140 |
| Msa1455880 | AT2G01760.1 | 42.667 | 150 | 82 | 3 | 7 | 154 | 4 | 151 | 6.36e-32 | 127 |
| Msa1455880 | AT1G67710.1 | 33.459 | 266 | 121 | 6 | 267 | 477 | 8 | 272 | 1.05e-35 | 140 |
| Msa1455880 | AT1G67710.1 | 42.537 | 134 | 76 | 1 | 11 | 143 | 8 | 141 | 1.04e-29 | 123 |
| Msa1455880 | AT4G31920.1 | 31.325 | 249 | 136 | 4 | 266 | 482 | 13 | 258 | 7.16e-32 | 129 |
| Msa1455880 | AT4G31920.1 | 33.906 | 233 | 120 | 5 | 10 | 208 | 13 | 245 | 6.90e-31 | 127 |
| Msa1455880 | AT2G01760.2 | 30.000 | 290 | 112 | 8 | 263 | 465 | 4 | 289 | 2.47e-31 | 126 |
| Msa1455880 | AT2G01760.2 | 35.955 | 178 | 82 | 4 | 7 | 154 | 4 | 179 | 2.13e-26 | 112 |
| Msa1455880 | AT2G25180.1 | 32.917 | 240 | 115 | 3 | 10 | 203 | 13 | 252 | 3.36e-29 | 122 |
| Msa1455880 | AT2G25180.1 | 33.891 | 239 | 114 | 6 | 266 | 460 | 13 | 251 | 2.21e-28 | 119 |
| Msa1455880 | AT3G16857.1 | 42.336 | 137 | 78 | 1 | 10 | 145 | 33 | 169 | 1.41e-27 | 117 |
| Msa1455880 | AT3G16857.1 | 41.803 | 122 | 70 | 1 | 266 | 386 | 33 | 154 | 1.51e-26 | 114 |
| Msa1455880 | AT3G16857.2 | 42.336 | 137 | 78 | 1 | 10 | 145 | 33 | 169 | 1.55e-27 | 117 |
| Msa1455880 | AT3G16857.2 | 41.803 | 122 | 70 | 1 | 266 | 386 | 33 | 154 | 1.45e-26 | 114 |
| Msa1455880 | AT5G58080.1 | 31.325 | 249 | 125 | 6 | 266 | 470 | 14 | 260 | 9.10e-22 | 99.8 |
| Msa1455880 | AT5G58080.1 | 31.128 | 257 | 127 | 9 | 10 | 221 | 14 | 265 | 6.78e-19 | 90.9 |
| Msa1455880 | AT1G67710.2 | 31.250 | 208 | 88 | 5 | 324 | 477 | 1 | 207 | 3.18e-20 | 94.0 |
| Msa1455880 | AT1G67710.2 | 43.421 | 76 | 43 | 0 | 68 | 143 | 1 | 76 | 1.89e-14 | 76.3 |
| Msa1455880 | AT5G49240.1 | 26.016 | 246 | 127 | 6 | 258 | 453 | 32 | 272 | 3.44e-19 | 88.6 |
| Msa1455880 | AT5G49240.1 | 26.271 | 236 | 125 | 5 | 9 | 195 | 37 | 272 | 2.44e-15 | 77.4 |
| Msa1455880 | AT2G01760.3 | 29.500 | 200 | 79 | 6 | 324 | 465 | 1 | 196 | 1.21e-18 | 87.4 |
| Msa1455880 | AT2G01760.3 | 40.909 | 88 | 49 | 2 | 68 | 154 | 1 | 86 | 2.06e-14 | 74.7 |
| Msa1455880 | AT1G49190.1 | 25.094 | 267 | 141 | 8 | 10 | 221 | 30 | 292 | 5.40e-18 | 86.7 |
| Msa1455880 | AT1G49190.1 | 31.967 | 122 | 82 | 1 | 266 | 386 | 30 | 151 | 7.35e-17 | 83.2 |
| Msa1455880 | AT3G62670.1 | 28.378 | 222 | 114 | 7 | 28 | 204 | 53 | 274 | 6.59e-18 | 86.7 |
| Msa1455880 | AT3G62670.1 | 26.809 | 235 | 127 | 6 | 271 | 462 | 42 | 274 | 8.26e-18 | 86.3 |
| Msa1455880 | AT3G16857.3 | 40.816 | 98 | 57 | 1 | 49 | 145 | 2 | 99 | 7.04e-17 | 84.3 |
| Msa1455880 | AT3G16857.3 | 41.333 | 75 | 44 | 0 | 312 | 386 | 10 | 84 | 9.66e-16 | 80.9 |
| Msa1455880 | AT1G49190.2 | 31.967 | 122 | 82 | 1 | 266 | 386 | 30 | 151 | 8.58e-17 | 84.3 |
| Msa1455880 | AT1G49190.2 | 33.065 | 124 | 78 | 2 | 10 | 130 | 30 | 151 | 1.13e-16 | 84.0 |
| Msa1455880 | AT1G68210.1 | 30.000 | 130 | 89 | 2 | 14 | 142 | 13 | 141 | 1.79e-11 | 67.4 |
Find 105 sgRNAs with CRISPR-Local
Find 491 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAATGATTCTCAAAATTA+TGG | 0.243357 | tig0036716:-22485 | Msa1455880:CDS |
| AAACTGTTTGACTGAAAATA+AGG | 0.266188 | tig0036716:-15583 | Msa1455880:CDS |
| ACATGTTGCCAGCCATTTAC+AGG | 0.283862 | tig0036716:-15253 | Msa1455880:intron |
| ACATGTTGCTAGTCATTTAC+AGG | 0.286115 | tig0036716:-22440 | Msa1455880:intron |
| CTCAAAATTATGGATGTTCC+AGG | 0.335551 | tig0036716:-22475 | Msa1455880:CDS |
| AATTATGGATGTTCCAGGTT+TGG | 0.345656 | tig0036716:-22470 | Msa1455880:CDS |
| ATTATGGATGTTCCAGGTTT+GGG | 0.349053 | tig0036716:-22469 | Msa1455880:CDS |
| CTTGAATTTGTTGGAAAGAA+TGG | 0.358508 | tig0036716:-23100 | Msa1455880:CDS |
| CTTTCTTTCCATCGAATTCA+AGG | 0.361862 | tig0036716:+15950 | Msa1455880:intergenic |
| TTCAGAAGCTGTATTGCATT+TGG | 0.371701 | tig0036716:+15974 | Msa1455880:intergenic |
| TTCTGATGCCTTGAATTTGT+TGG | 0.373586 | tig0036716:-23109 | Msa1455880:CDS |
| CACATATTGGACTAAGCCTT+TGG | 0.377509 | tig0036716:-15652 | Msa1455880:CDS |
| GATAAATCATCATCAACATA+TGG | 0.380393 | tig0036716:+14649 | Msa1455880:intergenic |
| AAAGTGACTAACCATGATAA+TGG | 0.381195 | tig0036716:+23267 | Msa1455880:intergenic |
| TACATATTGGACTAAGCCTT+TGG | 0.386876 | tig0036716:-22832 | Msa1455880:CDS |
| TGGCAACATGTAGTAAGAAT+TGG | 0.394902 | tig0036716:-15606 | Msa1455880:CDS |
| TGACAGGAATGTTGAGTTGT+AGG | 0.408636 | tig0036716:+15853 | Msa1455880:intergenic |
| ATCAGAAGCTGTGTTACATT+TGG | 0.412873 | tig0036716:+23125 | Msa1455880:intergenic |
| AATGTGGGGCTTGTACATAT+TGG | 0.414028 | tig0036716:-22845 | Msa1455880:CDS |
| AATAAAGAATATGAAATTGT+TGG | 0.416766 | tig0036716:-22753 | Msa1455880:CDS |
| CAGTTTGAAAGTTATCGTTC+TGG | 0.417272 | tig0036716:+22157 | Msa1455880:intergenic |
| AATATTGTGTGGTTGAATTC+AGG | 0.418564 | tig0036716:+14764 | Msa1455880:intergenic |
| CATTCTTTCCAACAAATTCA+AGG | 0.419108 | tig0036716:+23101 | Msa1455880:intergenic |
| GGTTGAAGAAAATAGAAAAC+CGG | 0.422779 | tig0036716:-22721 | Msa1455880:CDS |
| AATGTCGTTTGCAGAAATAT+AGG | 0.426550 | tig0036716:-22311 | Msa1455880:intron |
| ACGCTAAATTGTGTTTCAAA+AGG | 0.431875 | tig0036716:+14829 | Msa1455880:intergenic |
| GGTTCAAGAAAATAGAAAAC+GGG | 0.441425 | tig0036716:-15535 | Msa1455880:CDS |
| TGTAATCGATTCCATTATCA+TGG | 0.443909 | tig0036716:-23278 | Msa1455880:intron |
| CATCTCCTCAATAGAGTTGA+GGG | 0.445728 | tig0036716:+16170 | Msa1455880:intergenic |
| TTGAGACCGGCTGGGAATGA+TGG | 0.453544 | tig0036716:+16222 | Msa1455880:intergenic |
| AAGTCATAAACATCCATGTT+TGG | 0.458271 | tig0036716:+15891 | Msa1455880:intergenic |
| TCAAACTGAGCTGACTGATC+AGG | 0.459166 | tig0036716:-22142 | Msa1455880:CDS |
| AATAAGGAATATGAAATTGT+TGG | 0.459765 | tig0036716:-15567 | Msa1455880:CDS |
| AATAAATTCTTACTAATGAC+AGG | 0.461511 | tig0036716:+15837 | Msa1455880:intergenic |
| AATAAATTCTTACTAATGAC+AGG | 0.461511 | tig0036716:+22988 | Msa1455880:intergenic |
| ATATGAAATTGTTGGAAGCT+TGG | 0.461542 | tig0036716:-22745 | Msa1455880:CDS |
| TGTAATCGATATCATTATCA+AGG | 0.463829 | tig0036716:-16147 | Msa1455880:intron |
| TTGAGACCAGCAGGGAATGA+TGG | 0.467536 | tig0036716:+23353 | Msa1455880:intergenic |
| TCAACATATGGGAACAAGTT+GGG | 0.468173 | tig0036716:+14661 | Msa1455880:intergenic |
| AAAAGATACACATGCAAAGA+AGG | 0.470493 | tig0036716:-22676 | Msa1455880:CDS |
| AAGTCATAAGCATCCATGTT+TGG | 0.471983 | tig0036716:+23042 | Msa1455880:intergenic |
| TACTCACTCAATGCCGGAGC+AGG | 0.473606 | tig0036716:-14800 | Msa1455880:CDS |
| GCAATAACCTTGAGACCGGC+TGG | 0.475576 | tig0036716:+16213 | Msa1455880:intergenic |
| AGTGTGGGGCTTGCACATAT+TGG | 0.484931 | tig0036716:-15665 | Msa1455880:CDS |
| CTTGAATTCGATGGAAAGAA+AGG | 0.488990 | tig0036716:-15949 | Msa1455880:CDS |
| CACTTTCCTCAACTCTATTG+AGG | 0.492388 | tig0036716:-23306 | Msa1455880:CDS |
| CAGCTAGAAAACCATCATTC+CGG | 0.492887 | tig0036716:+22118 | Msa1455880:intergenic |
| GCAATAACCTTGAGACCAGC+AGG | 0.494358 | tig0036716:+23344 | Msa1455880:intergenic |
| TGGTTCAAGAAAATAGAAAA+CGG | 0.501089 | tig0036716:-15536 | Msa1455880:CDS |
| TGATGCTCATTTGCCAAACA+TGG | 0.502558 | tig0036716:-15904 | Msa1455880:CDS |
| GATGTTCCAGGTTTGGGTGT+AGG | 0.505057 | tig0036716:-22463 | Msa1455880:CDS |
| TAGGATTCATTTGAAGAGAT+CGG | 0.515087 | tig0036716:-22292 | Msa1455880:CDS |
| GACAGGAATGTTGAGTTGTA+GGG | 0.519779 | tig0036716:+15854 | Msa1455880:intergenic |
| ATCATTCCCTGCTGGTCTCA+AGG | 0.520371 | tig0036716:-23351 | Msa1455880:CDS |
| ACTGATCAGGACCGGAATGA+TGG | 0.523712 | tig0036716:-22129 | Msa1455880:intron |
| TTATGAAGTCTATTCAATGT+GGG | 0.525603 | tig0036716:-22860 | Msa1455880:CDS |
| TCAAACTCAATCGATCGATC+AGG | 0.527821 | tig0036716:-22181 | Msa1455880:CDS |
| TTGATGTCTTCTTCAACCAA+AGG | 0.528612 | tig0036716:+22816 | Msa1455880:intergenic |
| ATTATGAAGTCTATTGAGTG+TGG | 0.533506 | tig0036716:-15681 | Msa1455880:CDS |
| ACATGTCCTACACCCAAACC+TGG | 0.534820 | tig0036716:+22457 | Msa1455880:intergenic |
| AAAAGGAACCTGTAAATGGC+TGG | 0.535907 | tig0036716:+15245 | Msa1455880:intergenic |
| TTCTGAAGCCTTGAATTCGA+TGG | 0.535925 | tig0036716:-15958 | Msa1455880:CDS |
| TTATGAAGTCTATTGAGTGT+GGG | 0.536693 | tig0036716:-15680 | Msa1455880:CDS |
| CGACACACAACAACAATGGA+TGG | 0.536913 | tig0036716:-14728 | Msa1455880:CDS |
| GACAACCCATCATTCCCTGC+TGG | 0.539365 | tig0036716:-23359 | Msa1455880:CDS |
| ATATGAAATTGTTGGAAGCT+CGG | 0.539488 | tig0036716:-15559 | Msa1455880:CDS |
| TGAGACCAGCAGGGAATGAT+GGG | 0.539790 | tig0036716:+23354 | Msa1455880:intergenic |
| TGGCAACATGTTGTCAGAAA+CGG | 0.543020 | tig0036716:-22786 | Msa1455880:CDS |
| AGAAAACTGTGGTCCTGCTC+CGG | 0.546272 | tig0036716:+14787 | Msa1455880:intergenic |
| ATAAATCATCATCAACATAT+GGG | 0.548211 | tig0036716:+14650 | Msa1455880:intergenic |
| GGGTTATCATCTTCTCTACC+CGG | 0.548793 | tig0036716:+22702 | Msa1455880:intergenic |
| CTTCATAATAGAACTTTCTG+TGG | 0.551255 | tig0036716:+15695 | Msa1455880:intergenic |
| ATCATTCCCAGCCGGTCTCA+AGG | 0.552068 | tig0036716:-16220 | Msa1455880:CDS |
| CACTTCCCTCAACTCTATTG+AGG | 0.555134 | tig0036716:-16175 | Msa1455880:CDS |
| ATTATGAAGTCTATTCAATG+TGG | 0.558796 | tig0036716:-22861 | Msa1455880:CDS |
| ATTGACAAGGTTCATAGTGA+TGG | 0.561362 | tig0036716:-22207 | Msa1455880:CDS |
| ATCAACATATGGGAACAAGT+TGG | 0.563419 | tig0036716:+14660 | Msa1455880:intergenic |
| CTGAGCTGACTGATCAGGAC+CGG | 0.566450 | tig0036716:-22137 | Msa1455880:CDS |
| AATAGAAAACGGGGTAGAGA+AGG | 0.574777 | tig0036716:-15525 | Msa1455880:CDS |
| AGAAGCTACTCACTCAATGC+CGG | 0.575449 | tig0036716:-14806 | Msa1455880:CDS |
| TGAAATTGTTGGAAGCTTGG+TGG | 0.576315 | tig0036716:-22742 | Msa1455880:CDS |
| TGAGACCGGCTGGGAATGAT+GGG | 0.577892 | tig0036716:+16223 | Msa1455880:intergenic |
| AATTGCAATAACCTTGAGAC+CGG | 0.581075 | tig0036716:+16209 | Msa1455880:intergenic |
| ACATCTCCTCAATAGAGTTG+AGG | 0.585624 | tig0036716:+16169 | Msa1455880:intergenic |
| GAAAGTGATGTCATGATCAA+TGG | 0.586165 | tig0036716:+23322 | Msa1455880:intergenic |
| TCAAGACGAGTGCATTGACA+AGG | 0.590781 | tig0036716:-22220 | Msa1455880:CDS |
| TATGAAGTCTATTGAGTGTG+GGG | 0.592079 | tig0036716:-15679 | Msa1455880:CDS |
| TGATGCTCATATGCCAAACA+TGG | 0.604750 | tig0036716:-23055 | Msa1455880:CDS |
| CAATAACCTTGAGACCGGCT+GGG | 0.613963 | tig0036716:+16214 | Msa1455880:intergenic |
| TATGAAGTCTATTCAATGTG+GGG | 0.614025 | tig0036716:-22859 | Msa1455880:CDS |
| GACAACCCATCATTCCCAGC+CGG | 0.620153 | tig0036716:-16228 | Msa1455880:CDS |
| ACATCTCCTCAATAGAGTTG+AGG | 0.625514 | tig0036716:+23300 | Msa1455880:intergenic |
| ATTGCGACACACAACAACAA+TGG | 0.625759 | tig0036716:-14732 | Msa1455880:CDS |
| TCTTACTACATGTTGCCACA+TGG | 0.630006 | tig0036716:+15611 | Msa1455880:intergenic |
| AAGAAGACATCAAGAGCATG+TGG | 0.637621 | tig0036716:-22806 | Msa1455880:CDS |
| GTTGAAGAAAATAGAAAACC+GGG | 0.661890 | tig0036716:-22720 | Msa1455880:CDS |
| TGAAATTGTTGGAAGCTCGG+TGG | 0.670504 | tig0036716:-15556 | Msa1455880:CDS |
| CGGCTGATGAAACAAAACGT+GGG | 0.694912 | tig0036716:-22272 | Msa1455880:CDS |
| ATGATTTATCATCACTTGTG+TGG | 0.696325 | tig0036716:-14636 | Msa1455880:CDS |
| CAATAACCTTGAGACCAGCA+GGG | 0.699486 | tig0036716:+23345 | Msa1455880:intergenic |
| TGAGTTGTAGGGTAACATGT+CGG | 0.700482 | tig0036716:+15865 | Msa1455880:intergenic |
| TCGGCTGATGAAACAAAACG+TGG | 0.707531 | tig0036716:-22273 | Msa1455880:CDS |
| ATTGTCATGACAATATTGTG+TGG | 0.721410 | tig0036716:+14753 | Msa1455880:intergenic |
| GTTCAAGAAAATAGAAAACG+GGG | 0.742093 | tig0036716:-15534 | Msa1455880:CDS |
| TTGAATTCAGGAGAAAACTG+TGG | 0.744675 | tig0036716:+14776 | Msa1455870:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTCAAAAAAAAAAATAT+CGG | + | tig0036716:20741-20760 | Msa1455880:intergenic | 10.0% |
| !!! | TATTTTTTTTTTTGAAAACT+CGG | - | tig0036716:20742-20761 | Msa1455880:intron | 10.0% |
| !! | AATAAAGAATATGAAATTGT+TGG | - | tig0036716:15254-15273 | Msa1455880:CDS | 15.0% |
| !! | AAAAATAAGTGAGATAAAAA+TGG | + | tig0036716:15489-15508 | Msa1455880:intergenic | 15.0% |
| !!! | ATAATTTTGAGAATCATTTT+GGG | + | tig0036716:15523-15542 | Msa1455880:intergenic | 15.0% |
| !! | TTAAATTTAAACTGCATATT+AGG | + | tig0036716:15960-15979 | Msa1455880:intergenic | 15.0% |
| !!! | AAATAAAAACTAGCAATTTT+TGG | + | tig0036716:15984-16003 | Msa1455880:intergenic | 15.0% |
| !! | AGTATATCAAAAAACATTAT+TGG | + | tig0036716:17182-17201 | Msa1455880:intergenic | 15.0% |
| !! | ATAAAAGATATTATTCATTC+AGG | + | tig0036716:18112-18131 | Msa1455880:intergenic | 15.0% |
| !! | TAACTTAAAATATTATTACC+AGG | - | tig0036716:18189-18208 | Msa1455880:intron | 15.0% |
| !! | ACACAATAATTTATGATTAA+TGG | - | tig0036716:18595-18614 | Msa1455880:intron | 15.0% |
| !!! | CATTTTTCATTTTAATAATG+TGG | - | tig0036716:18870-18889 | Msa1455880:intron | 15.0% |
| !!! | ATTATTAGTAGCTATTTTAT+TGG | - | tig0036716:21110-21129 | Msa1455880:intron | 15.0% |
| !! | AGTAAACAGATATATTTATA+GGG | + | tig0036716:21509-21528 | Msa1455880:intergenic | 15.0% |
| !! | AAGTAAACAGATATATTTAT+AGG | + | tig0036716:21510-21529 | Msa1455880:intergenic | 15.0% |
| !!! | GTGATTTTAAATGAAATTTA+TGG | - | tig0036716:23041-23060 | Msa1455880:CDS | 15.0% |
| !! | AATAAATTCTTACTAATGAC+AGG | + | tig0036716:15022-15041 | Msa1455880:intergenic | 20.0% |
| !!! | TTATTTCTTTTTTGTAGTGA+TGG | - | tig0036716:15100-15119 | Msa1455880:intron | 20.0% |
| !!! | CATAATTTTGAGAATCATTT+TGG | + | tig0036716:15524-15543 | Msa1455880:intergenic | 20.0% |
| !! | CAAAATGATTCTCAAAATTA+TGG | - | tig0036716:15522-15541 | Msa1455880:CDS | 20.0% |
| !! | TAGAAATGCCAAAATAAAAA+AGG | + | tig0036716:16087-16106 | Msa1455880:intergenic | 20.0% |
| !!! | TTTTTTATTGCATTCCTTTA+AGG | - | tig0036716:16139-16158 | Msa1455880:intron | 20.0% |
| !!! | TATTATAACTTTTGAAACTC+AGG | - | tig0036716:16311-16330 | Msa1455880:intron | 20.0% |
| !! | TGAGAAATATATTTACTTTC+AGG | - | tig0036716:16556-16575 | Msa1455880:intron | 20.0% |
| !!! | TTTCTCGTATGAAAATTTTT+CGG | + | tig0036716:16591-16610 | Msa1455880:intergenic | 20.0% |
| !! | AACAATAAAAGATGTTCTTA+AGG | - | tig0036716:16640-16659 | Msa1455880:intron | 20.0% |
| !!! | TTTCTGGAAAAACTATTTAA+AGG | + | tig0036716:17118-17137 | Msa1455880:intergenic | 20.0% |
| !! | TTCAAATTAATTGTAATTGC+AGG | - | tig0036716:17228-17247 | Msa1455880:intron | 20.0% |
| !! | TATCATTAAGTGACAATTAA+TGG | + | tig0036716:17635-17654 | Msa1455880:intergenic | 20.0% |
| !! | ATAGAATTTAGTTATTTGTG+AGG | - | tig0036716:18019-18038 | Msa1455880:intron | 20.0% |
| !! | TTAAAATATTATTACCAGGT+AGG | - | tig0036716:18193-18212 | Msa1455880:intron | 20.0% |
| !! | AATTTCTTTAGCTGTTTAAT+AGG | - | tig0036716:18377-18396 | Msa1455880:intron | 20.0% |
| !! | TTCCATAATTAATTCTAACT+TGG | - | tig0036716:18766-18785 | Msa1455880:intron | 20.0% |
| !! | TCCATAATTAATTCTAACTT+GGG | - | tig0036716:18767-18786 | Msa1455880:intron | 20.0% |
| !! | TTAACAATGACAATATTTAG+TGG | + | tig0036716:18797-18816 | Msa1455880:intergenic | 20.0% |
| !! | TTCATTTATATCATAAGAGT+AGG | + | tig0036716:19447-19466 | Msa1455880:intergenic | 20.0% |
| !! | CTATATGAAAATCTATTTCA+AGG | - | tig0036716:19814-19833 | Msa1455880:intron | 20.0% |
| !! | GATGAAAGTAATATATATGT+AGG | - | tig0036716:20220-20239 | Msa1455880:intron | 20.0% |
| !!! | TTTTTAATCCTTTGTGTTTT+AGG | + | tig0036716:20637-20656 | Msa1455880:intergenic | 20.0% |
| !! | TATAACTTATGAATTCATAG+TGG | - | tig0036716:20703-20722 | Msa1455880:intron | 20.0% |
| !! | GCTAGAACTTAATTTAAATA+TGG | + | tig0036716:20829-20848 | Msa1455880:intergenic | 20.0% |
| !!! | AGTAGCTATATTTTTTTTTG+TGG | - | tig0036716:20963-20982 | Msa1455880:intron | 20.0% |
| !! | AGAAAAAAAAAACTAGACTA+CGG | - | tig0036716:21140-21159 | Msa1455880:intron | 20.0% |
| !!! | AGCTACTAATAATTTTCTTA+AGG | + | tig0036716:21166-21185 | Msa1455880:intergenic | 20.0% |
| !! | CACATATATTTATAGAGTTA+GGG | + | tig0036716:21417-21436 | Msa1455880:intergenic | 20.0% |
| !! | TGTGAAATTATTAGTAACTA+GGG | + | tig0036716:21674-21693 | Msa1455880:intergenic | 20.0% |
| !!! | AGAAACTTTAGAATTGAATA+AGG | + | tig0036716:21907-21926 | Msa1455880:intergenic | 20.0% |
| !! | AATAAATTCTTACTAATGAC+AGG | + | tig0036716:15022-15041 | Msa1455880:intergenic | 20.0% |
| !! | AATAAGGAATATGAAATTGT+TGG | - | tig0036716:22440-22459 | Msa1455880:intron | 20.0% |
| !!! | ATGTTTTTCTCTTAATTTTC+AGG | - | tig0036716:22677-22696 | Msa1455880:CDS | 20.0% |
| !!! | TGTTTTTCTCTTAATTTTCA+GGG | - | tig0036716:22678-22697 | Msa1455880:CDS | 20.0% |
| !!! | ATGATTTTCAGAATCTTTTT+TGG | + | tig0036716:22710-22729 | Msa1455880:intergenic | 20.0% |
| !!! | AAAAAAGATTCTGAAAATCA+TGG | - | tig0036716:22709-22728 | Msa1455880:CDS | 20.0% |
| !!! | AACATGTTCTTTTTTCATAT+CGG | + | tig0036716:22741-22760 | Msa1455880:intergenic | 20.0% |
| !! | TCAACAAAATTTATGCAAAA+AGG | + | tig0036716:22782-22801 | Msa1455880:intergenic | 20.0% |
| !!! | TTCATTTAAAATCACACAAA+AGG | + | tig0036716:23036-23055 | Msa1455880:intergenic | 20.0% |
| !! | AAAAATGTTGTTAGTAATGT+CGG | + | tig0036716:23317-23336 | Msa1455880:intergenic | 20.0% |
| !! | ATAAATCATCATCAACATAT+GGG | + | tig0036716:23360-23379 | Msa1455880:intergenic | 20.0% |
| ! | ATTATGAAGTCTATTCAATG+TGG | - | tig0036716:15146-15165 | Msa1455880:intron | 25.0% |
| ! | TTATGAAGTCTATTCAATGT+GGG | - | tig0036716:15147-15166 | Msa1455880:intron | 25.0% |
| ! | ACAAAGCAAAGAAATGAATT+AGG | + | tig0036716:15438-15457 | Msa1455880:intergenic | 25.0% |
| ! | ATTCTTACCAAAACTGTTAT+GGG | - | tig0036716:16221-16240 | Msa1455880:CDS | 25.0% |
| !! | TCCTTTTATTAATATGTCCT+TGG | - | tig0036716:16252-16271 | Msa1455880:intron | 25.0% |
| ! | ACCAAGGACATATTAATAAA+AGG | + | tig0036716:16256-16275 | Msa1455880:intergenic | 25.0% |
| ! | TGCAGAGAAAAAGAAAATAA+CGG | - | tig0036716:16458-16477 | Msa1455880:intron | 25.0% |
| ! | ACATAAACTAAACCAATTCT+AGG | + | tig0036716:16711-16730 | Msa1455880:intergenic | 25.0% |
| ! | TAGTCATCTATAATGTTCTT+TGG | - | tig0036716:16755-16774 | Msa1455880:intron | 25.0% |
| ! | AGAATTTACTTTCTTAAGCT+GGG | - | tig0036716:16806-16825 | Msa1455880:intron | 25.0% |
| ! | CTATTCAAGATTATCTTACT+CGG | + | tig0036716:16884-16903 | Msa1455880:intergenic | 25.0% |
| !! | GTTTTTCCAGAAATTTTTTG+AGG | - | tig0036716:17125-17144 | Msa1455880:intron | 25.0% |
| ! | AAAGTTCCTCAAAAAATTTC+TGG | + | tig0036716:17134-17153 | Msa1455880:intergenic | 25.0% |
| !!! | AGAAATTTTTTGAGGAACTT+TGG | - | tig0036716:17133-17152 | Msa1455880:intron | 25.0% |
| ! | AGTCTTAGTACTAAATTAAG+TGG | + | tig0036716:17658-17677 | Msa1455880:intergenic | 25.0% |
| ! | AACAAAAGTTTCATAGTTTG+AGG | - | tig0036716:17687-17706 | Msa1455880:intron | 25.0% |
| !!! | TCTCATTTTGATCATTGAAT+CGG | - | tig0036716:17732-17751 | Msa1455880:intron | 25.0% |
| !!! | AGAATTGAGATTTTGATCAA+AGG | - | tig0036716:17798-17817 | Msa1455880:intron | 25.0% |
| !!! | GAATTGAGATTTTGATCAAA+GGG | - | tig0036716:17799-17818 | Msa1455880:intron | 25.0% |
| ! | TTAAAGTTTATGCATCTTTC+TGG | + | tig0036716:18937-18956 | Msa1455880:intergenic | 25.0% |
| ! | GATCACATGATAAAATAACT+AGG | - | tig0036716:18986-19005 | Msa1455880:intron | 25.0% |
| ! | ACATGATAAAATAACTAGGT+TGG | - | tig0036716:18990-19009 | Msa1455880:intron | 25.0% |
| ! | AATCTGTTTATGATCAATTG+TGG | - | tig0036716:19500-19519 | Msa1455880:intron | 25.0% |
| !! | TGATCTTATGTGATTAGTTA+AGG | + | tig0036716:19543-19562 | Msa1455880:intergenic | 25.0% |
| ! | ATACAATTAACTACTTAGCA+AGG | - | tig0036716:19563-19582 | Msa1455880:intron | 25.0% |
| ! | GATTATAGTAAACCATATGA+TGG | + | tig0036716:20301-20320 | Msa1455880:intergenic | 25.0% |
| ! | TCTCATTATGTCAAAGAAAA+GGG | + | tig0036716:20408-20427 | Msa1455880:intergenic | 25.0% |
| ! | ATCTCATTATGTCAAAGAAA+AGG | + | tig0036716:20409-20428 | Msa1455880:intergenic | 25.0% |
| !! | TCTTTGAAAATCAAGGATTT+AGG | + | tig0036716:20481-20500 | Msa1455880:intergenic | 25.0% |
| !!! | AGCTATATTTTTTTTTGTGG+TGG | - | tig0036716:20966-20985 | Msa1455880:intron | 25.0% |
| ! | GACAATGCATAAAATATGTA+AGG | + | tig0036716:21011-21030 | Msa1455880:intergenic | 25.0% |
| ! | GCACATATATTTATAGAGTT+AGG | + | tig0036716:21418-21437 | Msa1455880:intergenic | 25.0% |
| ! | CAGATATATTTATAGGGTTA+GGG | + | tig0036716:21503-21522 | Msa1455880:intergenic | 25.0% |
| ! | ACAGATATATTTATAGGGTT+AGG | + | tig0036716:21504-21523 | Msa1455880:intergenic | 25.0% |
| !! | AGTAAAGGCATATACTTATA+GGG | + | tig0036716:21599-21618 | Msa1455880:intergenic | 25.0% |
| !! | AAGTAAAGGCATATACTTAT+AGG | + | tig0036716:21600-21619 | Msa1455880:intergenic | 25.0% |
| ! | GTGTGAAATTATTAGTAACT+AGG | + | tig0036716:21675-21694 | Msa1455880:intergenic | 25.0% |
| ! | GAGAAAAAATAGAATTGAGA+GGG | + | tig0036716:21707-21726 | Msa1455880:intergenic | 25.0% |
| ! | TGTAATCGATATCATTATCA+AGG | - | tig0036716:21860-21879 | Msa1455880:intron | 25.0% |
| !!! | TTATTTCTCTTTTGTAGTGA+TGG | - | tig0036716:22280-22299 | Msa1455880:CDS | 25.0% |
| ! | AAACTGTTTGACTGAAAATA+AGG | - | tig0036716:22424-22443 | Msa1455880:intron | 25.0% |
| ! | TGGTTCAAGAAAATAGAAAA+CGG | - | tig0036716:22471-22490 | Msa1455880:CDS | 25.0% |
| ! | AGAAAAGAATCATACTATCA+AGG | + | tig0036716:22604-22623 | Msa1455880:intergenic | 25.0% |
| !! | GTTTTTCTCTTAATTTTCAG+GGG | - | tig0036716:22679-22698 | Msa1455880:CDS | 25.0% |
| !!! | ACATGTTCTTTTTTCATATC+GGG | + | tig0036716:22740-22759 | Msa1455880:intergenic | 25.0% |
| ! | AAAATTACAACAACAGAGTT+AGG | + | tig0036716:22866-22885 | Msa1455880:intergenic | 25.0% |
| ! | TTTAATAACATGCAAGACTA+AGG | + | tig0036716:22912-22931 | Msa1455880:intergenic | 25.0% |
| ! | AAAGGATATATAGAAGCTAA+TGG | + | tig0036716:23018-23037 | Msa1455880:intergenic | 25.0% |
| ! | GTAGAATGAAAAAATCAAAG+AGG | - | tig0036716:23152-23171 | Msa1455880:intron | 25.0% |
| ! | GATAAATCATCATCAACATA+TGG | + | tig0036716:23361-23380 | Msa1455880:intergenic | 25.0% |
| ! | TGTAATCGATTCCATTATCA+TGG | - | tig0036716:14729-14748 | Msa1455880:CDS | 30.0% |
| AAAGTGACTAACCATGATAA+TGG | + | tig0036716:14743-14762 | Msa1455880:intergenic | 30.0% | |
| CATTCTTTCCAACAAATTCA+AGG | + | tig0036716:14909-14928 | Msa1455880:intergenic | 30.0% | |
| !! | CTTGAATTTGTTGGAAAGAA+TGG | - | tig0036716:14907-14926 | Msa1455880:intron | 30.0% |
| !!! | TGAGTTTTAGGGTAACATTT+TGG | + | tig0036716:14994-15013 | Msa1455880:intergenic | 30.0% |
| TATGAAGTCTATTCAATGTG+GGG | - | tig0036716:15148-15167 | Msa1455880:intron | 30.0% | |
| ATATGAAATTGTTGGAAGCT+TGG | - | tig0036716:15262-15281 | Msa1455880:CDS | 30.0% | |
| GGTTGAAGAAAATAGAAAAC+CGG | - | tig0036716:15286-15305 | Msa1455880:CDS | 30.0% | |
| GTTGAAGAAAATAGAAAACC+GGG | - | tig0036716:15287-15306 | Msa1455880:CDS | 30.0% | |
| ! | TTTGCATGTGTATCTTTTGA+GGG | + | tig0036716:15329-15348 | Msa1455880:intergenic | 30.0% |
| AAAAGATACACATGCAAAGA+AGG | - | tig0036716:15331-15350 | Msa1455880:intron | 30.0% | |
| !! | GTCATTTACAGGTTTGTTTT+CGG | - | tig0036716:15578-15597 | Msa1455880:CDS | 30.0% |
| ! | AATGTCGTTTGCAGAAATAT+AGG | - | tig0036716:15696-15715 | Msa1455880:CDS | 30.0% |
| TAGGATTCATTTGAAGAGAT+CGG | - | tig0036716:15715-15734 | Msa1455880:intron | 30.0% | |
| ATACCAACAGTAGTACATTA+AGG | + | tig0036716:16032-16051 | Msa1455880:intergenic | 30.0% | |
| ATGAATTGTACCTAAAGCTT+AGG | + | tig0036716:16059-16078 | Msa1455880:intergenic | 30.0% | |
| !!! | CATCTGTGCCTTTTTTATTT+TGG | - | tig0036716:16076-16095 | Msa1455880:intron | 30.0% |
| !! | AACAGTTTTGGTAAGAATCA+CGG | + | tig0036716:16219-16238 | Msa1455880:intergenic | 30.0% |
| GATTCTTACCAAAACTGTTA+TGG | - | tig0036716:16220-16239 | Msa1455880:CDS | 30.0% | |
| TACTTAATTCACTGAAACCA+AGG | + | tig0036716:16272-16291 | Msa1455880:intergenic | 30.0% | |
| AAAATTGAATGGACAAAGCA+AGG | + | tig0036716:16373-16392 | Msa1455880:intergenic | 30.0% | |
| ! | TTGCTTTGTCCATTCAATTT+TGG | - | tig0036716:16372-16391 | Msa1455880:intron | 30.0% |
| !! | TTGTCCATTCAATTTTGGTA+TGG | - | tig0036716:16377-16396 | Msa1455880:intron | 30.0% |
| CAAACCATACCAAAATTGAA+TGG | + | tig0036716:16384-16403 | Msa1455880:intergenic | 30.0% | |
| !! | CATTCAATTTTGGTATGGTT+TGG | - | tig0036716:16382-16401 | Msa1455880:intron | 30.0% |
| TTCTCATATGAAAGTCACTA+TGG | + | tig0036716:16542-16561 | Msa1455880:intergenic | 30.0% | |
| !! | TCGTATGAAAATTTTTCGGT+AGG | + | tig0036716:16587-16606 | Msa1455880:intergenic | 30.0% |
| ! | AATTGGTTTAGTTTATGTCG+AGG | - | tig0036716:16713-16732 | Msa1455880:intron | 30.0% |
| GAGAATTTACTTTCTTAAGC+TGG | - | tig0036716:16805-16824 | Msa1455880:intron | 30.0% | |
| AGAATTTCACAGAAGATTGA+TGG | - | tig0036716:17055-17074 | Msa1455880:intron | 30.0% | |
| GCAATAAGAATCAGAAACAT+CGG | - | tig0036716:17302-17321 | Msa1455880:intron | 30.0% | |
| CATAGTACTTAATTCGTACA+CGG | + | tig0036716:17577-17596 | Msa1455880:intergenic | 30.0% | |
| !!! | GAGAAATGTTTTTTCTCCTT+AGG | + | tig0036716:17716-17735 | Msa1455880:intergenic | 30.0% |
| !! | TTGAAGAGTGTTGTATTAGT+AGG | - | tig0036716:17775-17794 | Msa1455880:intron | 30.0% |
| TTGCAAACTAGAACAAATTC+AGG | + | tig0036716:17936-17955 | Msa1455880:intergenic | 30.0% | |
| !! | CAGTCAATGGATTATTAATG+TGG | - | tig0036716:18254-18273 | Msa1455880:intron | 30.0% |
| AGCTGTTTAATAGGAAGATA+AGG | - | tig0036716:18386-18405 | Msa1455880:intron | 30.0% | |
| GTTTAATAGGAAGATAAGGA+AGG | - | tig0036716:18390-18409 | Msa1455880:intron | 30.0% | |
| TAATGGTTGAGATAGATATG+AGG | - | tig0036716:18612-18631 | Msa1455880:intron | 30.0% | |
| GCCCAAGTTAGAATTAATTA+TGG | + | tig0036716:18771-18790 | Msa1455880:intergenic | 30.0% | |
| ! | AATAACTAGGTTGGATGATA+TGG | - | tig0036716:18999-19018 | Msa1455880:intron | 30.0% |
| ! | TTTAAGATCACAATTCTGGA+AGG | - | tig0036716:19030-19049 | Msa1455880:intron | 30.0% |
| TAGAGATTGTAGAAAAGGTT+TGG | - | tig0036716:19065-19084 | Msa1455880:intron | 30.0% | |
| AATTGAAACTGAACGAAGAA+AGG | + | tig0036716:19164-19183 | Msa1455880:intergenic | 30.0% | |
| TAGTAGCATGTTAATAGTTG+AGG | - | tig0036716:19699-19718 | Msa1455880:intron | 30.0% | |
| TAATAGTTGAGGAAGCAAAA+TGG | - | tig0036716:19710-19729 | Msa1455880:intron | 30.0% | |
| ! | CTTATTTGTTGCAATAGCTA+AGG | - | tig0036716:19914-19933 | Msa1455880:intron | 30.0% |
| TCGTTATTATGTGCATATGT+AGG | - | tig0036716:20167-20186 | Msa1455880:intron | 30.0% | |
| CGTTATTATGTGCATATGTA+GGG | - | tig0036716:20168-20187 | Msa1455880:intron | 30.0% | |
| GCATCATATAGAAGATTAGT+TGG | + | tig0036716:20274-20293 | Msa1455880:intergenic | 30.0% | |
| TATGATGCAATACCATCATA+TGG | - | tig0036716:20286-20305 | Msa1455880:intron | 30.0% | |
| ATCATGATGCAATTTAAACG+AGG | - | tig0036716:20318-20337 | Msa1455880:intron | 30.0% | |
| TCATGATGCAATTTAAACGA+GGG | - | tig0036716:20319-20338 | Msa1455880:intron | 30.0% | |
| AATAAGCAACCTCTAATCTA+AGG | - | tig0036716:20440-20459 | Msa1455880:intron | 30.0% | |
| TAAACAGTTCCTTAGATTAG+AGG | + | tig0036716:20452-20471 | Msa1455880:intergenic | 30.0% | |
| ! | ACACAACTCTTTGAAAATCA+AGG | + | tig0036716:20488-20507 | Msa1455880:intergenic | 30.0% |
| TAAAAACTGTGTAATCCGAA+GGG | - | tig0036716:20774-20793 | Msa1455880:intron | 30.0% | |
| CGTTTGTTTATCTGTTATCA+AGG | + | tig0036716:20887-20906 | Msa1455880:intergenic | 30.0% | |
| TGCATAAAATATGTAAGGTC+CGG | + | tig0036716:21006-21025 | Msa1455880:intergenic | 30.0% | |
| !! | TTATAGAGTTAGGGTTTTGT+TGG | + | tig0036716:21408-21427 | Msa1455880:intergenic | 30.0% |
| ATATCTGTTTACTTCTCTTC+TGG | - | tig0036716:21516-21535 | Msa1455880:intron | 30.0% | |
| GGAGAAAAAATAGAATTGAG+AGG | + | tig0036716:21708-21727 | Msa1455880:intergenic | 30.0% | |
| ! | GGTTTTACTGCAAATTGTAA+TGG | - | tig0036716:21745-21764 | Msa1455880:intron | 30.0% |
| AAGTCATAAACATCCATGTT+TGG | + | tig0036716:22119-22138 | Msa1455880:intergenic | 30.0% | |
| CTTCATAATAGAACTTTCTG+TGG | + | tig0036716:22315-22334 | Msa1455880:intergenic | 30.0% | |
| ATTATGAAGTCTATTGAGTG+TGG | - | tig0036716:22326-22345 | Msa1455880:intron | 30.0% | |
| TTATGAAGTCTATTGAGTGT+GGG | - | tig0036716:22327-22346 | Msa1455880:intron | 30.0% | |
| ATATGAAATTGTTGGAAGCT+CGG | - | tig0036716:15262-15281 | Msa1455880:CDS | 30.0% | |
| GGTTCAAGAAAATAGAAAAC+GGG | - | tig0036716:22472-22491 | Msa1455880:CDS | 30.0% | |
| GTTCAAGAAAATAGAAAACG+GGG | - | tig0036716:22473-22492 | Msa1455880:CDS | 30.0% | |
| !!! | CATTCTACCTTTTTTCTCTT+CGG | + | tig0036716:23140-23159 | Msa1455880:intergenic | 30.0% |
| ACGCTAAATTGTGTTTCAAA+AGG | + | tig0036716:23181-23200 | Msa1455880:intergenic | 30.0% | |
| AATATTGTGTGGTTGAATTC+AGG | + | tig0036716:23246-23265 | Msa1455880:intergenic | 30.0% | |
| ATTGTCATGACAATATTGTG+TGG | + | tig0036716:23257-23276 | Msa1455880:intergenic | 30.0% | |
| ATGATTTATCATCACTTGTG+TGG | - | tig0036716:23371-23390 | Msa1455880:CDS | 30.0% | |
| GAAAGTGATGTCATGATCAA+TGG | + | tig0036716:14688-14707 | Msa1455880:intergenic | 35.0% | |
| ATCAGAAGCTGTGTTACATT+TGG | + | tig0036716:14885-14904 | Msa1455880:intergenic | 35.0% | |
| TTCTGATGCCTTGAATTTGT+TGG | - | tig0036716:14898-14917 | Msa1455880:CDS | 35.0% | |
| AAGTCATAAGCATCCATGTT+TGG | + | tig0036716:14968-14987 | Msa1455880:intergenic | 35.0% | |
| ! | GACAGGAATGTTGAGTTTTA+GGG | + | tig0036716:15005-15024 | Msa1455880:intergenic | 35.0% |
| ! | TGACAGGAATGTTGAGTTTT+AGG | + | tig0036716:15006-15025 | Msa1455880:intergenic | 35.0% |
| TACATATTGGACTAAGCCTT+TGG | - | tig0036716:15175-15194 | Msa1455880:intron | 35.0% | |
| TTGATGTCTTCTTCAACCAA+AGG | + | tig0036716:15194-15213 | Msa1455880:intergenic | 35.0% | |
| ! | TTGCATGTGTATCTTTTGAG+GGG | + | tig0036716:15328-15347 | Msa1455880:intergenic | 35.0% |
| ! | CTTTGCATGTGTATCTTTTG+AGG | + | tig0036716:15330-15349 | Msa1455880:intergenic | 35.0% |
| AACTGCATCAACGATTTCTA+TGG | - | tig0036716:15375-15394 | Msa1455880:intron | 35.0% | |
| ACTGCATCAACGATTTCTAT+GGG | - | tig0036716:15376-15395 | Msa1455880:intron | 35.0% | |
| AGGAAAGAACCATACTATCA+AGG | + | tig0036716:15418-15437 | Msa1455880:intergenic | 35.0% | |
| CTCAAAATTATGGATGTTCC+AGG | - | tig0036716:15532-15551 | Msa1455880:CDS | 35.0% | |
| AATTATGGATGTTCCAGGTT+TGG | - | tig0036716:15537-15556 | Msa1455880:CDS | 35.0% | |
| ATTATGGATGTTCCAGGTTT+GGG | - | tig0036716:15538-15557 | Msa1455880:CDS | 35.0% | |
| ACATGTTGCTAGTCATTTAC+AGG | - | tig0036716:15567-15586 | Msa1455880:CDS | 35.0% | |
| !! | TTTACAGGTTTGTTTTCGGA+AGG | - | tig0036716:15582-15601 | Msa1455880:CDS | 35.0% |
| GTGGGAAGAAAAAATCAAAG+TGG | - | tig0036716:15753-15772 | Msa1455880:intron | 35.0% | |
| ATTGACAAGGTTCATAGTGA+TGG | - | tig0036716:15800-15819 | Msa1455880:intron | 35.0% | |
| CAGTTTGAAAGTTATCGTTC+TGG | + | tig0036716:15853-15872 | Msa1455880:intergenic | 35.0% | |
| AACAGTAGTACATTAAGGCA+AGG | + | tig0036716:16027-16046 | Msa1455880:intergenic | 35.0% | |
| TTGCCTTAATGTACTACTGT+TGG | - | tig0036716:16026-16045 | Msa1455880:intron | 35.0% | |
| TGGTATATCACCTAAGCTTT+AGG | - | tig0036716:16046-16065 | Msa1455880:intron | 35.0% | |
| !! | ATTCCTTTAAGGTCTATAGC+TGG | - | tig0036716:16150-16169 | Msa1455880:CDS | 35.0% |
| TACCATATTAGCGCTAAACA+TGG | - | tig0036716:16493-16512 | Msa1455880:intron | 35.0% | |
| CATCTATAACACCTCTGATA+TGG | + | tig0036716:16519-16538 | Msa1455880:intergenic | 35.0% | |
| AGGAGAACTCCATAAAATCT+AGG | - | tig0036716:16660-16679 | Msa1455880:intron | 35.0% | |
| GGAGAACTCCATAAAATCTA+GGG | - | tig0036716:16661-16680 | Msa1455880:intron | 35.0% | |
| ! | ACTTTCCTCCCTAGATTTTA+TGG | + | tig0036716:16672-16691 | Msa1455880:intergenic | 35.0% |
| TACAGGTTATTGCCTAGAAT+TGG | - | tig0036716:16696-16715 | Msa1455880:intron | 35.0% | |
| TTCTGATTCTTATTGCTGCT+GGG | + | tig0036716:17298-17317 | Msa1455880:intergenic | 35.0% | |
| TTTCTGATTCTTATTGCTGC+TGG | + | tig0036716:17299-17318 | Msa1455880:intergenic | 35.0% | |
| ATGCAAATTTGAACATCCTC+GGG | + | tig0036716:17486-17505 | Msa1455880:intergenic | 35.0% | |
| CATGCAAATTTGAACATCCT+CGG | + | tig0036716:17487-17506 | Msa1455880:intergenic | 35.0% | |
| CTAATACAACACTCTTCAAG+TGG | + | tig0036716:17774-17793 | Msa1455880:intergenic | 35.0% | |
| !! | TGAGATTTTGATCAAAGGGA+TGG | - | tig0036716:17803-17822 | Msa1455880:intron | 35.0% |
| ! | CTCTAGAGACATAGTGAATA+TGG | + | tig0036716:17836-17855 | Msa1455880:intergenic | 35.0% |
| GTTATTTGTGAGGATAATCG+AGG | - | tig0036716:18029-18048 | Msa1455880:intron | 35.0% | |
| ! | AAGAGTATAAGTGTCCTAGT+TGG | - | tig0036716:18413-18432 | Msa1455880:intron | 35.0% |
| TTTGTTGAAGAAGGAAGGAA+GGG | - | tig0036716:18436-18455 | Msa1455880:intron | 35.0% | |
| ! | AAGAAGCATAGAGAATTCTC+AGG | + | tig0036716:18478-18497 | Msa1455880:intergenic | 35.0% |
| !! | ATGGAATGTGAATTGACTTG+AGG | - | tig0036716:18689-18708 | Msa1455880:intron | 35.0% |
| ! | AATTGAAACCTGTCTGGTTT+AGG | - | tig0036716:18713-18732 | Msa1455880:intron | 35.0% |
| ! | CTATATGACAGAGTTGTTTC+AGG | - | tig0036716:18964-18983 | Msa1455880:intron | 35.0% |
| CCAGAATTGTGATCTTAAAG+TGG | + | tig0036716:19029-19048 | Msa1455880:intergenic | 35.0% | |
| !! | CCACTTTAAGATCACAATTC+TGG | - | tig0036716:19026-19045 | Msa1455880:intron | 35.0% |
| TTTCTACAATCTCTATGCCT+CGG | + | tig0036716:19060-19079 | Msa1455880:intergenic | 35.0% | |
| AGGCATAGAGATTGTAGAAA+AGG | - | tig0036716:19060-19079 | Msa1455880:intron | 35.0% | |
| TGTAGAAAAGGTTTGGACAT+TGG | - | tig0036716:19072-19091 | Msa1455880:intron | 35.0% | |
| ! | ATGCACTCTTTCATTTTCTC+AGG | + | tig0036716:19188-19207 | Msa1455880:intergenic | 35.0% |
| GAGTGCATTTCAATACACAT+TGG | - | tig0036716:19200-19219 | Msa1455880:intron | 35.0% | |
| TTTACTACCTTCCTTGAACA+TGG | - | tig0036716:19261-19280 | Msa1455880:intron | 35.0% | |
| !! | TTCACTGAAAAAGGTGTTGA+AGG | + | tig0036716:19343-19362 | Msa1455880:intergenic | 35.0% |
| TATATCATAAGAGTAGGCAC+TGG | + | tig0036716:19441-19460 | Msa1455880:intergenic | 35.0% | |
| AACATGCTACTATCCAAGTT+GGG | + | tig0036716:19691-19710 | Msa1455880:intergenic | 35.0% | |
| TAACATGCTACTATCCAAGT+TGG | + | tig0036716:19692-19711 | Msa1455880:intergenic | 35.0% | |
| GCATGTACATTCCAAAAGAT+CGG | + | tig0036716:19757-19776 | Msa1455880:intergenic | 35.0% | |
| GTAAGAGAAAAATCGTAAGC+TGG | + | tig0036716:19795-19814 | Msa1455880:intergenic | 35.0% | |
| TCTTTCATGGAAGAGAAGAT+TGG | - | tig0036716:19845-19864 | Msa1455880:intron | 35.0% | |
| TCTAGTCAGTGTATCTTTCT+TGG | + | tig0036716:20014-20033 | Msa1455880:intergenic | 35.0% | |
| CATGATGCAATTTAAACGAG+GGG | - | tig0036716:20320-20339 | Msa1455880:intron | 35.0% | |
| AATTTAAACGAGGGGTTAGA+AGG | - | tig0036716:20328-20347 | Msa1455880:intron | 35.0% | |
| !! | ATCCTTTGTGTTTTAGGCTA+GGG | + | tig0036716:20631-20650 | Msa1455880:intergenic | 35.0% |
| !! | AATCCTTTGTGTTTTAGGCT+AGG | + | tig0036716:20632-20651 | Msa1455880:intergenic | 35.0% |
| !!! | GGATTACACAGTTTTTAGGT+AGG | + | tig0036716:20771-20790 | Msa1455880:intergenic | 35.0% |
| ! | CTTCGGATTACACAGTTTTT+AGG | + | tig0036716:20775-20794 | Msa1455880:intergenic | 35.0% |
| CTAAAAACTGTGTAATCCGA+AGG | - | tig0036716:20773-20792 | Msa1455880:intron | 35.0% | |
| AACTGTGGAATTAAACCCTT+CGG | + | tig0036716:20792-20811 | Msa1455880:intergenic | 35.0% | |
| TTTAAATATGGCTCTCCAAC+AGG | + | tig0036716:20817-20836 | Msa1455880:intergenic | 35.0% | |
| TCACACGTATCAATTTCGAT+CGG | + | tig0036716:20851-20870 | Msa1455880:intergenic | 35.0% | |
| CATAAAATATGTAAGGTCCG+GGG | + | tig0036716:21004-21023 | Msa1455880:intergenic | 35.0% | |
| GCATAAAATATGTAAGGTCC+GGG | + | tig0036716:21005-21024 | Msa1455880:intergenic | 35.0% | |
| ACATACAGCTGTCGATATTA+AGG | - | tig0036716:21317-21336 | Msa1455880:intron | 35.0% | |
| TATTAAGGAAACAACGAGAC+AGG | - | tig0036716:21332-21351 | Msa1455880:intron | 35.0% | |
| GGCATATACTTATAGGGTTA+GGG | + | tig0036716:21593-21612 | Msa1455880:intergenic | 35.0% | |
| AGGCATATACTTATAGGGTT+AGG | + | tig0036716:21594-21613 | Msa1455880:intergenic | 35.0% | |
| TAGTCTATGGAGAGAAGTAA+AGG | + | tig0036716:21614-21633 | Msa1455880:intergenic | 35.0% | |
| ACAAGAAAGTGAGTAGTCTA+TGG | + | tig0036716:21627-21646 | Msa1455880:intergenic | 35.0% | |
| ! | TCTCCAACTTGTTTCTTTCT+TGG | - | tig0036716:21723-21742 | Msa1455880:intron | 35.0% |
| ! | CTCCAACTTGTTTCTTTCTT+GGG | - | tig0036716:21724-21743 | Msa1455880:intron | 35.0% |
| AACCCAAGAAAGAAACAAGT+TGG | + | tig0036716:21729-21748 | Msa1455880:intergenic | 35.0% | |
| AATTGCAATAACCTTGAGAC+CGG | + | tig0036716:21801-21820 | Msa1455880:intergenic | 35.0% | |
| TTCAGAAGCTGTATTGCATT+TGG | + | tig0036716:22036-22055 | Msa1455880:intergenic | 35.0% | |
| CTTTCTTTCCATCGAATTCA+AGG | + | tig0036716:22060-22079 | Msa1455880:intergenic | 35.0% | |
| CTTGAATTCGATGGAAAGAA+AGG | - | tig0036716:22058-22077 | Msa1455880:intron | 35.0% | |
| TATGAAGTCTATTGAGTGTG+GGG | - | tig0036716:22328-22347 | Msa1455880:intron | 35.0% | |
| TAAGCCTTTGGTTGAAAAAG+AGG | - | tig0036716:22367-22386 | Msa1455880:intron | 35.0% | |
| !!! | TTGACCTCTTTTTCAACCAA+AGG | + | tig0036716:22374-22393 | Msa1455880:intergenic | 35.0% |
| TGGCAACATGTAGTAAGAAT+TGG | - | tig0036716:22401-22420 | Msa1455880:intron | 35.0% | |
| ! | CTTTGCAAGTGTTTCTTTTG+AGG | + | tig0036716:22516-22535 | Msa1455880:intergenic | 35.0% |
| CTATATGCTGTCAATCAACT+AGG | - | tig0036716:22578-22597 | Msa1455880:intron | 35.0% | |
| TGCAAAAAGGAACCTGTAAA+TGG | + | tig0036716:22769-22788 | Msa1455880:intergenic | 35.0% | |
| AAAAGATCACTGACAAACCT+AGG | + | tig0036716:22842-22861 | Msa1455880:intergenic | 35.0% | |
| TTGAATTCAGGAGAAAACTG+TGG | + | tig0036716:23234-23253 | Msa1455880:intergenic | 35.0% | |
| TCAACATATGGGAACAAGTT+GGG | + | tig0036716:23349-23368 | Msa1455880:intergenic | 35.0% | |
| ATCAACATATGGGAACAAGT+TGG | + | tig0036716:23350-23369 | Msa1455880:intergenic | 35.0% | |
| CACTTTCCTCAACTCTATTG+AGG | - | tig0036716:14701-14720 | Msa1455880:CDS | 40.0% | |
| ACATCTCCTCAATAGAGTTG+AGG | + | tig0036716:14710-14729 | Msa1455880:intergenic | 40.0% | |
| TGATGCTCATATGCCAAACA+TGG | - | tig0036716:14952-14971 | Msa1455880:intron | 40.0% | |
| AATGTGGGGCTTGTACATAT+TGG | - | tig0036716:15162-15181 | Msa1455880:intron | 40.0% | |
| ! | AAGAAGACATCAAGAGCATG+TGG | - | tig0036716:15201-15220 | Msa1455880:intron | 40.0% |
| TGGCAACATGTTGTCAGAAA+CGG | - | tig0036716:15221-15240 | Msa1455880:intron | 40.0% | |
| TGAAATTGTTGGAAGCTTGG+TGG | - | tig0036716:15265-15284 | Msa1455880:CDS | 40.0% | |
| AGAAATCGTTGATGCAGTTC+TGG | + | tig0036716:15374-15393 | Msa1455880:intergenic | 40.0% | |
| ! | TCAACTAGGCCTTGATAGTA+TGG | - | tig0036716:15406-15425 | Msa1455880:intron | 40.0% |
| TCAAACTCAATCGATCGATC+AGG | - | tig0036716:15826-15845 | Msa1455880:intron | 40.0% | |
| CAGCTAGAAAACCATCATTC+CGG | + | tig0036716:15892-15911 | Msa1455880:intergenic | 40.0% | |
| !!! | ATGATGGTTTTCTAGCTGAG+TGG | - | tig0036716:15894-15913 | Msa1455880:CDS | 40.0% |
| ATCCTACCTTTACAACCTGA+TGG | - | tig0036716:15934-15953 | Msa1455880:CDS | 40.0% | |
| ! | ATTAGGCCATCAGGTTGTAA+AGG | + | tig0036716:15943-15962 | Msa1455880:intergenic | 40.0% |
| AAACTGCATATTAGGCCATC+AGG | + | tig0036716:15952-15971 | Msa1455880:intergenic | 40.0% | |
| GAACCAGCTATAGACCTTAA+AGG | + | tig0036716:16156-16175 | Msa1455880:intergenic | 40.0% | |
| ! | GTGCTTTCCCATAACAGTTT+TGG | + | tig0036716:16231-16250 | Msa1455880:intergenic | 40.0% |
| ACTTCAGAGACCAATGTGTA+AGG | - | tig0036716:16412-16431 | Msa1455880:intron | 40.0% | |
| CTTCAGAGACCAATGTGTAA+GGG | - | tig0036716:16413-16432 | Msa1455880:intron | 40.0% | |
| TTACGTTGCAAGACGTCTAT+AGG | + | tig0036716:16622-16641 | Msa1455880:intergenic | 40.0% | |
| GAACTCCATAAAATCTAGGG+AGG | - | tig0036716:16664-16683 | Msa1455880:intron | 40.0% | |
| !!! | TAGGGAGGAAAGTGTTTTAC+AGG | - | tig0036716:16679-16698 | Msa1455880:intron | 40.0% |
| ACAAAGTAAACATGCTAGCG+AGG | + | tig0036716:16933-16952 | Msa1455880:intergenic | 40.0% | |
| ATTGCCTCTTTCTCTGATCA+AGG | - | tig0036716:17408-17427 | Msa1455880:intron | 40.0% | |
| ATGACTAGTAATCGTGTGTG+AGG | - | tig0036716:17432-17451 | Msa1455880:intron | 40.0% | |
| TCATAGTTTGAGGAGTCCTA+AGG | - | tig0036716:17697-17716 | Msa1455880:intron | 40.0% | |
| TCAAGTGGACGGTATTAAAG+CGG | + | tig0036716:17759-17778 | Msa1455880:intergenic | 40.0% | |
| TACAACACTCTTCAAGTGGA+CGG | + | tig0036716:17770-17789 | Msa1455880:intergenic | 40.0% | |
| ACCAACTTAGCCAATTTGTG+AGG | - | tig0036716:17873-17892 | Msa1455880:intron | 40.0% | |
| TCCTCACAAATTGGCTAAGT+TGG | + | tig0036716:17877-17896 | Msa1455880:intergenic | 40.0% | |
| CCTCGATTATCCTCACAAAT+TGG | + | tig0036716:17886-17905 | Msa1455880:intergenic | 40.0% | |
| CCAATTTGTGAGGATAATCG+AGG | - | tig0036716:17883-17902 | Msa1455880:intron | 40.0% | |
| !! | AGGTTCTGGTTTGCCATTTA+GGG | - | tig0036716:17903-17922 | Msa1455880:intron | 40.0% |
| TCGATCTGTGACTATAGACT+AGG | - | tig0036716:18053-18072 | Msa1455880:intron | 40.0% | |
| CAATTACACAATGACCTACC+TGG | + | tig0036716:18210-18229 | Msa1455880:intergenic | 40.0% | |
| TTAGACACACTAGCAGTCAA+TGG | - | tig0036716:18241-18260 | Msa1455880:intron | 40.0% | |
| CCTTCTTCAACAAACCAACT+AGG | + | tig0036716:18430-18449 | Msa1455880:intergenic | 40.0% | |
| !! | CCTAGTTGGTTTGTTGAAGA+AGG | - | tig0036716:18427-18446 | Msa1455880:intron | 40.0% |
| !! | GTTGGTTTGTTGAAGAAGGA+AGG | - | tig0036716:18431-18450 | Msa1455880:intron | 40.0% |
| ! | GTTTGTTGAAGAAGGAAGGA+AGG | - | tig0036716:18435-18454 | Msa1455880:intron | 40.0% |
| TTGTTGAAGAAGGAAGGAAG+GGG | - | tig0036716:18437-18456 | Msa1455880:intron | 40.0% | |
| AAGTCAGCTCAGTTTCTACA+TGG | - | tig0036716:18670-18689 | Msa1455880:intron | 40.0% | |
| TGAGGTAATTGAAACCTGTC+TGG | - | tig0036716:18707-18726 | Msa1455880:intron | 40.0% | |
| GGTTTGGACATTGGATGATA+TGG | - | tig0036716:19081-19100 | Msa1455880:intron | 40.0% | |
| TCAATACACATTGGTCAAGC+TGG | - | tig0036716:19209-19228 | Msa1455880:intron | 40.0% | |
| AAGGTAGTAAAGTTCCAAGC+CGG | + | tig0036716:19252-19271 | Msa1455880:intergenic | 40.0% | |
| !! | TTTTTCAGTGAAACCAGTGC+CGG | - | tig0036716:19351-19370 | Msa1455880:intron | 40.0% |
| TGAGTGGAACATATGCTTTC+CGG | + | tig0036716:19373-19392 | Msa1455880:intergenic | 40.0% | |
| GATATCCATCAATCCCAACT+TGG | - | tig0036716:19675-19694 | Msa1455880:intron | 40.0% | |
| ! | ACTATCCAAGTTGGGATTGA+TGG | + | tig0036716:19683-19702 | Msa1455880:intergenic | 40.0% |
| ! | AAGTCTGCTATCCGATCTTT+TGG | - | tig0036716:19743-19762 | Msa1455880:intron | 40.0% |
| ! | CAAGGTGCTTTGTTCTTTCA+TGG | - | tig0036716:19832-19851 | Msa1455880:intron | 40.0% |
| TTGGCAATTCTCTGATCTCA+TGG | + | tig0036716:19995-20014 | Msa1455880:intergenic | 40.0% | |
| AATTCACCAGTTCACCTTCA+AGG | + | tig0036716:20086-20105 | Msa1455880:intergenic | 40.0% | |
| AGGTGAACTGGTGAATTTCT+AGG | - | tig0036716:20089-20108 | Msa1455880:intron | 40.0% | |
| ATGTAGGGTGTGAAAGATGT+TGG | - | tig0036716:20183-20202 | Msa1455880:intron | 40.0% | |
| TTCGTATTCCCTCAACGAAT+TGG | - | tig0036716:20600-20619 | Msa1455880:intron | 40.0% | |
| TAATTCCACAGTTCACCTGT+TGG | - | tig0036716:20799-20818 | Msa1455880:intron | 40.0% | |
| !!! | ATTTTTTTTTGTGGTGGCCG+AGG | - | tig0036716:20972-20991 | Msa1455880:intron | 40.0% |
| CAGCTGTATGTGTTACACAT+TGG | + | tig0036716:21308-21327 | Msa1455880:intergenic | 40.0% | |
| !!! | GGGTTTTGTTGGATCAACTA+AGG | + | tig0036716:21397-21416 | Msa1455880:intergenic | 40.0% |
| TATGTGCTTCCTTCTCTTGA+TGG | - | tig0036716:21431-21450 | Msa1455880:intron | 40.0% | |
| GAATGTGATCCATCAAGAGA+AGG | + | tig0036716:21443-21462 | Msa1455880:intergenic | 40.0% | |
| ! | CTAGGGTTTGTGTTTTGCAA+AGG | + | tig0036716:21657-21676 | Msa1455880:intergenic | 40.0% |
| CATCTCCTCAATAGAGTTGA+GGG | + | tig0036716:14709-14728 | Msa1455880:intergenic | 40.0% | |
| ACATCTCCTCAATAGAGTTG+AGG | + | tig0036716:14710-14729 | Msa1455880:intergenic | 40.0% | |
| !! | TTCTGAAGCCTTGAATTCGA+TGG | - | tig0036716:22049-22068 | Msa1455880:intron | 40.0% |
| TGATGCTCATTTGCCAAACA+TGG | - | tig0036716:22103-22122 | Msa1455880:intron | 40.0% | |
| TGAGTTGTAGGGTAACATGT+CGG | + | tig0036716:22145-22164 | Msa1455880:intergenic | 40.0% | |
| ! | GACAGGAATGTTGAGTTGTA+GGG | + | tig0036716:22156-22175 | Msa1455880:intergenic | 40.0% |
| ! | TGACAGGAATGTTGAGTTGT+AGG | + | tig0036716:22157-22176 | Msa1455880:intergenic | 40.0% |
| CACATATTGGACTAAGCCTT+TGG | - | tig0036716:22355-22374 | Msa1455880:intron | 40.0% | |
| AAAAAGAGGTCAAGACCATG+TGG | - | tig0036716:22381-22400 | Msa1455880:intron | 40.0% | |
| TCTTACTACATGTTGCCACA+TGG | + | tig0036716:22399-22418 | Msa1455880:intergenic | 40.0% | |
| AATAGAAAACGGGGTAGAGA+AGG | - | tig0036716:22482-22501 | Msa1455880:CDS | 40.0% | |
| AAAAGGAACCTGTAAATGGC+TGG | + | tig0036716:22765-22784 | Msa1455880:intergenic | 40.0% | |
| AAACCTAGGCAACTAGACTT+AGG | + | tig0036716:22828-22847 | Msa1455880:intergenic | 40.0% | |
| AGTAGTGAATTCTGCAGTCA+TGG | - | tig0036716:22948-22967 | Msa1455880:intron | 40.0% | |
| AGCTCAACCGAAGAGAAAAA+AGG | - | tig0036716:23130-23149 | Msa1455880:CDS | 40.0% | |
| ATTGCGACACACAACAACAA+TGG | - | tig0036716:23275-23294 | Msa1455880:intron | 40.0% | |
| CAATAACCTTGAGACCAGCA+GGG | + | tig0036716:14665-14684 | Msa1455880:intergenic | 45.0% | |
| GGGTTATCATCTTCTCTACC+CGG | + | tig0036716:15308-15327 | Msa1455880:intergenic | 45.0% | |
| ! | CTATGGGCTGTCAATCAACT+AGG | - | tig0036716:15392-15411 | Msa1455880:intron | 45.0% |
| TCGGCTGATGAAACAAAACG+TGG | - | tig0036716:15734-15753 | Msa1455880:intron | 45.0% | |
| CGGCTGATGAAACAAAACGT+GGG | - | tig0036716:15735-15754 | Msa1455880:intron | 45.0% | |
| ! | TCAAGACGAGTGCATTGACA+AGG | - | tig0036716:15787-15806 | Msa1455880:intron | 45.0% |
| TCAAACTGAGCTGACTGATC+AGG | - | tig0036716:15865-15884 | Msa1455880:CDS | 45.0% | |
| !! | CTAGCTGAGTGGATTGATTG+CGG | - | tig0036716:15905-15924 | Msa1455880:CDS | 45.0% |
| !! | TAGCTGAGTGGATTGATTGC+GGG | - | tig0036716:15906-15925 | Msa1455880:CDS | 45.0% |
| CTCAGGCAGATCTTTGACAA+CGG | - | tig0036716:16328-16347 | Msa1455880:intron | 45.0% | |
| AGGTAGCATCCCTTACACAT+TGG | + | tig0036716:16425-16444 | Msa1455880:intergenic | 45.0% | |
| GGATGCTACCTTTCAGTGAA+TGG | - | tig0036716:16434-16453 | Msa1455880:intron | 45.0% | |
| CTCTGCAACCATTCACTGAA+AGG | + | tig0036716:16445-16464 | Msa1455880:intergenic | 45.0% | |
| GGCCATGTTTAGCGCTAATA+TGG | + | tig0036716:16498-16517 | Msa1455880:intergenic | 45.0% | |
| GCTAAACATGGCCATATCAG+AGG | - | tig0036716:16505-16524 | Msa1455880:intron | 45.0% | |
| AAGTAAACATGCTAGCGAGG+AGG | + | tig0036716:16930-16949 | Msa1455880:intergenic | 45.0% | |
| GCAATGTGCATTTGTGCAGA+AGG | + | tig0036716:16972-16991 | Msa1455880:intergenic | 45.0% | |
| TGCACAAATGCACATTGCTC+AGG | - | tig0036716:16974-16993 | Msa1455880:intron | 45.0% | |
| GCACAAATGCACATTGCTCA+GGG | - | tig0036716:16975-16994 | Msa1455880:intron | 45.0% | |
| ! | TGGTGACTTCGTTTTCTCTG+TGG | - | tig0036716:17153-17172 | Msa1455880:intron | 45.0% |
| ACAGAACATCTGCATGCTCA+AGG | - | tig0036716:17204-17223 | Msa1455880:intron | 45.0% | |
| CATGCCTTGATCAGAGAAAG+AGG | + | tig0036716:17415-17434 | Msa1455880:intergenic | 45.0% | |
| ACTAGTAATCGTGTGTGAGG+TGG | - | tig0036716:17435-17454 | Msa1455880:intron | 45.0% | |
| ! | AGGAATTGGCATGGTTGGTT+TGG | - | tig0036716:17458-17477 | Msa1455880:intron | 45.0% |
| TGTGAGGATAATCGAGGTTC+TGG | - | tig0036716:17889-17908 | Msa1455880:intron | 45.0% | |
| !! | GAGGTTCTGGTTTGCCATTT+AGG | - | tig0036716:17902-17921 | Msa1455880:intron | 45.0% |
| TTCAGGAAGTCAGCCCTAAA+TGG | + | tig0036716:17919-17938 | Msa1455880:intergenic | 45.0% | |
| CAACGTATCCTAAACCAGAC+AGG | + | tig0036716:18724-18743 | Msa1455880:intergenic | 45.0% | |
| ! | CTGTCTGGTTTAGGATACGT+TGG | - | tig0036716:18722-18741 | Msa1455880:intron | 45.0% |
| ! | CTCCCTTTTGAATTTGCGAG+CGG | + | tig0036716:19121-19140 | Msa1455880:intergenic | 45.0% |
| CTAACTGCCATGTTCAAGGA+AGG | + | tig0036716:19271-19290 | Msa1455880:intergenic | 45.0% | |
| GAGACTAACTGCCATGTTCA+AGG | + | tig0036716:19275-19294 | Msa1455880:intergenic | 45.0% | |
| ! | GAACATGGCAGTTAGTCTCA+TGG | - | tig0036716:19276-19295 | Msa1455880:intron | 45.0% |
| CTTAGGGACATGACTGTAAG+AGG | - | tig0036716:19306-19325 | Msa1455880:intron | 45.0% | |
| !! | GGCACTGGTTTCACTGAAAA+AGG | + | tig0036716:19352-19371 | Msa1455880:intergenic | 45.0% |
| AAATCTACGAAGGCGATGAG+TGG | + | tig0036716:19389-19408 | Msa1455880:intergenic | 45.0% | |
| ACTCATCGCCTTCGTAGATT+TGG | - | tig0036716:19388-19407 | Msa1455880:intron | 45.0% | |
| ! | TCTACCGAGCTCTAACTTGT+GGG | + | tig0036716:19657-19676 | Msa1455880:intergenic | 45.0% |
| ! | ATCTACCGAGCTCTAACTTG+TGG | + | tig0036716:19658-19677 | Msa1455880:intergenic | 45.0% |
| GCAATTCTCTGATCTCATGG+AGG | + | tig0036716:19992-20011 | Msa1455880:intergenic | 45.0% | |
| AAGGTTTCTCTGATGCTGAC+TGG | + | tig0036716:20067-20086 | Msa1455880:intergenic | 45.0% | |
| CAGCATCAGAGAAACCTTGA+AGG | - | tig0036716:20069-20088 | Msa1455880:intron | 45.0% | |
| GAGAAACCTTGAAGGTGAAC+TGG | - | tig0036716:20077-20096 | Msa1455880:intron | 45.0% | |
| ! | AGAAGGAGTGGACATTGGTT+TGG | - | tig0036716:20345-20364 | Msa1455880:intron | 45.0% |
| !! | GTGGACATTGGTTTGGAAAC+AGG | - | tig0036716:20352-20371 | Msa1455880:intron | 45.0% |
| AGCGATCTCGATTGAATCTC+TGG | - | tig0036716:20537-20556 | Msa1455880:intron | 45.0% | |
| GCGATCTCGATTGAATCTCT+GGG | - | tig0036716:20538-20557 | Msa1455880:intron | 45.0% | |
| TGCCCTAGCCTAAAACACAA+AGG | - | tig0036716:20626-20645 | Msa1455880:intron | 45.0% | |
| ACAACTGAGCTAAGTTCACG+AGG | - | tig0036716:21035-21054 | Msa1455880:intron | 45.0% | |
| CACTTCCCTCAACTCTATTG+AGG | - | tig0036716:21832-21851 | Msa1455880:intron | 45.0% | |
| TGAAATTGTTGGAAGCTCGG+TGG | - | tig0036716:22451-22470 | Msa1455880:CDS | 45.0% | |
| CAAAGAAAGCCCGTTTGTCT+TGG | - | tig0036716:22531-22550 | Msa1455880:intron | 45.0% | |
| ACATGTTGCCAGCCATTTAC+AGG | - | tig0036716:22754-22773 | Msa1455880:CDS | 45.0% | |
| GTACCTAAGTCTAGTTGCCT+AGG | - | tig0036716:22822-22841 | Msa1455880:CDS | 45.0% | |
| AGAAGCTACTCACTCAATGC+CGG | - | tig0036716:23201-23220 | Msa1455880:intron | 45.0% | |
| CGACACACAACAACAATGGA+TGG | - | tig0036716:23279-23298 | Msa1455880:CDS | 45.0% | |
| !!! | ATTCTATTTATTTTTTTTTA+AGG | + | tig0036716:18006-18025 | Msa1455880:intergenic | 5.0% |
| TGAGACCAGCAGGGAATGAT+GGG | + | tig0036716:14656-14675 | Msa1455880:intergenic | 50.0% | |
| TTGAGACCAGCAGGGAATGA+TGG | + | tig0036716:14657-14676 | Msa1455880:intergenic | 50.0% | |
| ! | ATCATTCCCTGCTGGTCTCA+AGG | - | tig0036716:14656-14675 | Msa1455880:CDS | 50.0% |
| GCAATAACCTTGAGACCAGC+AGG | + | tig0036716:14666-14685 | Msa1455880:intergenic | 50.0% | |
| CAAAGAAGGCCCGTTTGTCT+TGG | - | tig0036716:15345-15364 | Msa1455880:intron | 50.0% | |
| TTCTGGCGACCAAGACAAAC+GGG | + | tig0036716:15357-15376 | Msa1455880:intergenic | 50.0% | |
| GTTCTGGCGACCAAGACAAA+CGG | + | tig0036716:15358-15377 | Msa1455880:intergenic | 50.0% | |
| GATGTTCCAGGTTTGGGTGT+AGG | - | tig0036716:15544-15563 | Msa1455880:CDS | 50.0% | |
| ACATGTCCTACACCCAAACC+TGG | + | tig0036716:15553-15572 | Msa1455880:intergenic | 50.0% | |
| ACTGATCAGGACCGGAATGA+TGG | - | tig0036716:15878-15897 | Msa1455880:CDS | 50.0% | |
| !! | TGAGTGGATTGATTGCGGGA+CGG | - | tig0036716:15910-15929 | Msa1455880:CDS | 50.0% |
| ! | GGCCATCAGGTTGTAAAGGT+AGG | + | tig0036716:15939-15958 | Msa1455880:intergenic | 50.0% |
| GCACATTGCTCAGGGAACTT+TGG | - | tig0036716:16983-17002 | Msa1455880:intron | 50.0% | |
| ! | TGATGGCGATGCTCTAGATG+AGG | - | tig0036716:17072-17091 | Msa1455880:intron | 50.0% |
| ! | GCGATGCTCTAGATGAGGTT+TGG | - | tig0036716:17077-17096 | Msa1455880:intron | 50.0% |
| AGTAATCGTGTGTGAGGTGG+AGG | - | tig0036716:17438-17457 | Msa1455880:intron | 50.0% | |
| ! | CAATTCTGGAAGGAACACCG+AGG | - | tig0036716:19040-19059 | Msa1455880:intron | 50.0% |
| ACGCCGCTCGCAAATTCAAA+AGG | - | tig0036716:19115-19134 | Msa1455880:intron | 50.0% | |
| CGCCGCTCGCAAATTCAAAA+GGG | - | tig0036716:19116-19135 | Msa1455880:intron | 50.0% | |
| CATTGGTCAAGCTGGTATCC+CGG | - | tig0036716:19217-19236 | Msa1455880:intron | 50.0% | |
| AGTCTCATGGCCAGATGCTT+AGG | - | tig0036716:19289-19308 | Msa1455880:intron | 50.0% | |
| GTCTCATGGCCAGATGCTTA+GGG | - | tig0036716:19290-19309 | Msa1455880:intron | 50.0% | |
| CAGTCATGTCCCTAAGCATC+TGG | + | tig0036716:19302-19321 | Msa1455880:intergenic | 50.0% | |
| AGGGACATGACTGTAAGAGG+AGG | - | tig0036716:19309-19328 | Msa1455880:intron | 50.0% | |
| GAACATATGCTTTCCGGCAC+TGG | + | tig0036716:19367-19386 | Msa1455880:intergenic | 50.0% | |
| ! | GGTGGGTTCCAAATCTACGA+AGG | + | tig0036716:19399-19418 | Msa1455880:intergenic | 50.0% |
| !! | CTGACTTCGTTGGTGATGGT+GGG | + | tig0036716:19416-19435 | Msa1455880:intergenic | 50.0% |
| !! | TCTGACTTCGTTGGTGATGG+TGG | + | tig0036716:19417-19436 | Msa1455880:intergenic | 50.0% |
| ! | GGTTCTGACTTCGTTGGTGA+TGG | + | tig0036716:19420-19439 | Msa1455880:intergenic | 50.0% |
| ! | TACCGAGCTCTAACTTGTGG+GGG | + | tig0036716:19655-19674 | Msa1455880:intergenic | 50.0% |
| ! | CTACCGAGCTCTAACTTGTG+GGG | + | tig0036716:19656-19675 | Msa1455880:intergenic | 50.0% |
| AAACGAGGGGTTAGAAGGAG+TGG | - | tig0036716:20333-20352 | Msa1455880:intron | 50.0% | |
| GGGTTAGAAGGAGTGGACAT+TGG | - | tig0036716:20340-20359 | Msa1455880:intron | 50.0% | |
| CTCACTTGAGTGTGCCTCTA+GGG | - | tig0036716:20561-20580 | Msa1455880:intron | 50.0% | |
| AGGGAATACGAACCACGTTG+TGG | + | tig0036716:20592-20611 | Msa1455880:intergenic | 50.0% | |
| GGGCAAGTCCAATTCGTTGA+GGG | + | tig0036716:20611-20630 | Msa1455880:intergenic | 50.0% | |
| AGGGCAAGTCCAATTCGTTG+AGG | + | tig0036716:20612-20631 | Msa1455880:intergenic | 50.0% | |
| CAATAACCTTGAGACCGGCT+GGG | + | tig0036716:21796-21815 | Msa1455880:intergenic | 50.0% | |
| AGTGTGGGGCTTGCACATAT+TGG | - | tig0036716:22342-22361 | Msa1455880:intron | 50.0% | |
| TTCTGGCGACCAAGACAAAC+GGG | + | tig0036716:15357-15376 | Msa1455880:intergenic | 50.0% | |
| GTTCTGGCGACCAAGACAAA+CGG | + | tig0036716:15358-15377 | Msa1455880:intergenic | 50.0% | |
| AGAAACCGCTGATGCAGTTC+TGG | + | tig0036716:22560-22579 | Msa1455880:intergenic | 50.0% | |
| AGAAAACTGTGGTCCTGCTC+CGG | + | tig0036716:23223-23242 | Msa1455880:intergenic | 50.0% | |
| GACAACCCATCATTCCCTGC+TGG | - | tig0036716:14648-14667 | Msa1455880:CDS | 55.0% | |
| CTGAGCTGACTGATCAGGAC+CGG | - | tig0036716:15870-15889 | Msa1455880:CDS | 55.0% | |
| !! | GAGTGGATTGATTGCGGGAC+GGG | - | tig0036716:15911-15930 | Msa1455880:CDS | 55.0% |
| CGTGTGTGAGGTGGAGGAAT+TGG | - | tig0036716:17444-17463 | Msa1455880:intron | 55.0% | |
| GTGAGGTGGAGGAATTGGCA+TGG | - | tig0036716:17449-17468 | Msa1455880:intron | 55.0% | |
| GGTGGAGGAATTGGCATGGT+TGG | - | tig0036716:17453-17472 | Msa1455880:intron | 55.0% | |
| ! | GGTATCCCGGTCTGAAATGC+CGG | - | tig0036716:19230-19249 | Msa1455880:intron | 55.0% |
| TCCAAGCCGGCATTTCAGAC+CGG | + | tig0036716:19239-19258 | Msa1455880:intergenic | 55.0% | |
| !! | GGCACTGGTTCTGACTTCGT+TGG | + | tig0036716:19426-19445 | Msa1455880:intergenic | 55.0% |
| TCCCCCCACAAGTTAGAGCT+CGG | - | tig0036716:19650-19669 | Msa1455880:intron | 55.0% | |
| ! | ACCGAGCTCTAACTTGTGGG+GGG | + | tig0036716:19654-19673 | Msa1455880:intergenic | 55.0% |
| GCTCACTTGAGTGTGCCTCT+AGG | - | tig0036716:20560-20579 | Msa1455880:intron | 55.0% | |
| ACGTTGTGGAGACACCCTAG+AGG | + | tig0036716:20578-20597 | Msa1455880:intergenic | 55.0% | |
| ! | TCTAGGGTGTCTCCACAACG+TGG | - | tig0036716:20577-20596 | Msa1455880:intron | 55.0% |
| GCTCTCCAACAGGTGAACTG+TGG | + | tig0036716:20807-20826 | Msa1455880:intergenic | 55.0% | |
| AAGGTCCGGGGTTTGAACCT+CGG | + | tig0036716:20992-21011 | Msa1455880:intergenic | 55.0% | |
| GCTTCTCTATTCCCGCTGTC+TGG | - | tig0036716:21369-21388 | Msa1455880:intron | 55.0% | |
| ! | TCAACTAAGGCGCCAGACAG+CGG | + | tig0036716:21384-21403 | Msa1455880:intergenic | 55.0% |
| GACAACCCATCATTCCCAGC+CGG | - | tig0036716:21779-21798 | Msa1455880:intron | 55.0% | |
| TGAGACCGGCTGGGAATGAT+GGG | + | tig0036716:21787-21806 | Msa1455880:intergenic | 55.0% | |
| TTGAGACCGGCTGGGAATGA+TGG | + | tig0036716:21788-21807 | Msa1455880:intergenic | 55.0% | |
| ATCATTCCCAGCCGGTCTCA+AGG | - | tig0036716:21787-21806 | Msa1455880:intron | 55.0% | |
| GCAATAACCTTGAGACCGGC+TGG | + | tig0036716:21797-21816 | Msa1455880:intergenic | 55.0% | |
| TACTCACTCAATGCCGGAGC+AGG | - | tig0036716:23207-23226 | Msa1455880:intron | 55.0% | |
| ACATGCTAGCGAGGAGGCAG+AGG | + | tig0036716:16924-16943 | Msa1455880:intergenic | 60.0% | |
| !! | CATGGTTGGTTTGGCACCCG+AGG | - | tig0036716:17467-17486 | Msa1455880:intron | 60.0% |
| CCAAGCCGGCATTTCAGACC+GGG | + | tig0036716:19238-19257 | Msa1455880:intergenic | 60.0% | |
| ! | CAACTAAGGCGCCAGACAGC+GGG | + | tig0036716:21383-21402 | Msa1455880:intergenic | 60.0% |
| GGTCGCCAGAACTGCATCAG+CGG | - | tig0036716:22552-22571 | Msa1455880:intron | 60.0% | |
| ! | CCCGGTCTGAAATGCCGGCT+TGG | - | tig0036716:19235-19254 | Msa1455880:intron | 65.0% |
| GGTGGCCGAGGTTCAAACCC+CGG | - | tig0036716:20984-21003 | Msa1455880:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0036716 | gene | 14633 | 23396 | 14633 | ID=Msa1455880;Name=Msa1455880 |
| tig0036716 | mRNA | 14633 | 23396 | 14633 | ID=Msa1455880-mRNA-1;Parent=Msa1455880;Name=Msa1455880-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|1|0.88|0.9|10|0|548 |
| tig0036716 | exon | 23279 | 23396 | 23279 | ID=Msa1455880-mRNA-1:exon:20448;Parent=Msa1455880-mRNA-1 |
| tig0036716 | exon | 23001 | 23150 | 23001 | ID=Msa1455880-mRNA-1:exon:20447;Parent=Msa1455880-mRNA-1 |
| tig0036716 | exon | 22673 | 22912 | 22673 | ID=Msa1455880-mRNA-1:exon:20446;Parent=Msa1455880-mRNA-1 |
| tig0036716 | exon | 22441 | 22517 | 22441 | ID=Msa1455880-mRNA-1:exon:20445;Parent=Msa1455880-mRNA-1 |
| tig0036716 | exon | 22130 | 22319 | 22130 | ID=Msa1455880-mRNA-1:exon:20444;Parent=Msa1455880-mRNA-1 |
| tig0036716 | exon | 16148 | 16258 | 16148 | ID=Msa1455880-mRNA-1:exon:20443;Parent=Msa1455880-mRNA-1 |
| tig0036716 | exon | 15850 | 15999 | 15850 | ID=Msa1455880-mRNA-1:exon:20442;Parent=Msa1455880-mRNA-1 |
| tig0036716 | exon | 15487 | 15732 | 15487 | ID=Msa1455880-mRNA-1:exon:20441;Parent=Msa1455880-mRNA-1 |
| tig0036716 | exon | 15254 | 15330 | 15254 | ID=Msa1455880-mRNA-1:exon:20440;Parent=Msa1455880-mRNA-1 |
| tig0036716 | exon | 14633 | 14920 | 14633 | ID=Msa1455880-mRNA-1:exon:20439;Parent=Msa1455880-mRNA-1 |
| tig0036716 | CDS | 23279 | 23396 | 23279 | ID=Msa1455880-mRNA-1:cds;Parent=Msa1455880-mRNA-1 |
| tig0036716 | CDS | 23001 | 23150 | 23001 | ID=Msa1455880-mRNA-1:cds;Parent=Msa1455880-mRNA-1 |
| tig0036716 | CDS | 22673 | 22912 | 22673 | ID=Msa1455880-mRNA-1:cds;Parent=Msa1455880-mRNA-1 |
| tig0036716 | CDS | 22441 | 22517 | 22441 | ID=Msa1455880-mRNA-1:cds;Parent=Msa1455880-mRNA-1 |
| tig0036716 | CDS | 22130 | 22319 | 22130 | ID=Msa1455880-mRNA-1:cds;Parent=Msa1455880-mRNA-1 |
| tig0036716 | CDS | 16148 | 16258 | 16148 | ID=Msa1455880-mRNA-1:cds;Parent=Msa1455880-mRNA-1 |
| tig0036716 | CDS | 15850 | 15999 | 15850 | ID=Msa1455880-mRNA-1:cds;Parent=Msa1455880-mRNA-1 |
| tig0036716 | CDS | 15487 | 15732 | 15487 | ID=Msa1455880-mRNA-1:cds;Parent=Msa1455880-mRNA-1 |
| tig0036716 | CDS | 15254 | 15330 | 15254 | ID=Msa1455880-mRNA-1:cds;Parent=Msa1455880-mRNA-1 |
| tig0036716 | CDS | 14633 | 14920 | 14633 | ID=Msa1455880-mRNA-1:cds;Parent=Msa1455880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
