Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1457340 | XP_013451804.1 | 98.387 | 310 | 5 | 0 | 1 | 310 | 1 | 310 | 0.0 | 623 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1457340 | sp|Q9MA75|VIP1_ARATH | 45.260 | 327 | 121 | 12 | 13 | 287 | 12 | 332 | 1.62e-65 | 212 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1457340 | A0A072U839 | 98.387 | 310 | 5 | 0 | 1 | 310 | 1 | 310 | 0.0 | 623 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1457340 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1457340 | MtrunA17_Chr6g0463571 | 98.387 | 310 | 5 | 0 | 1 | 310 | 1 | 310 | 0.0 | 623 |
| Msa1457340 | MtrunA17_Chr5g0432701 | 50.781 | 256 | 86 | 9 | 26 | 274 | 49 | 271 | 7.02e-61 | 197 |
| Msa1457340 | MtrunA17_Chr3g0107491 | 44.710 | 293 | 106 | 14 | 26 | 281 | 36 | 309 | 2.60e-52 | 176 |
| Msa1457340 | MtrunA17_Chr4g0036071 | 57.714 | 175 | 66 | 3 | 76 | 243 | 279 | 452 | 1.96e-49 | 171 |
| Msa1457340 | MtrunA17_Chr3g0128781 | 49.541 | 218 | 84 | 6 | 28 | 243 | 7 | 200 | 3.80e-49 | 166 |
| Msa1457340 | MtrunA17_Chr2g0329551 | 57.143 | 168 | 57 | 4 | 107 | 260 | 168 | 334 | 4.15e-47 | 164 |
| Msa1457340 | MtrunA17_Chr1g0156051 | 46.818 | 220 | 98 | 7 | 74 | 281 | 303 | 515 | 5.60e-33 | 127 |
| Msa1457340 | MtrunA17_Chr2g0316551 | 49.474 | 95 | 48 | 0 | 149 | 243 | 206 | 300 | 1.33e-20 | 90.5 |
| Msa1457340 | MtrunA17_Chr4g0040891 | 43.966 | 116 | 58 | 1 | 149 | 257 | 192 | 307 | 1.81e-19 | 87.0 |
| Msa1457340 | MtrunA17_Chr2g0325131 | 47.000 | 100 | 53 | 0 | 149 | 248 | 189 | 288 | 8.34e-19 | 85.5 |
| Msa1457340 | MtrunA17_Chr1g0202051 | 34.361 | 227 | 132 | 6 | 31 | 252 | 11 | 225 | 1.21e-18 | 84.3 |
| Msa1457340 | MtrunA17_Chr8g0380611 | 30.153 | 262 | 141 | 11 | 11 | 244 | 75 | 322 | 1.06e-13 | 70.9 |
| Msa1457340 | MtrunA17_Chr2g0306581 | 65.306 | 49 | 17 | 0 | 139 | 187 | 1 | 49 | 2.63e-13 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1457340 | AT1G43700.1 | 45.260 | 327 | 121 | 12 | 13 | 287 | 12 | 332 | 1.65e-66 | 212 |
| Msa1457340 | AT2G31370.5 | 64.828 | 145 | 41 | 2 | 109 | 244 | 151 | 294 | 4.06e-50 | 171 |
| Msa1457340 | AT2G31370.2 | 59.880 | 167 | 56 | 3 | 109 | 265 | 151 | 316 | 1.08e-49 | 170 |
| Msa1457340 | AT2G31370.4 | 59.880 | 167 | 56 | 3 | 109 | 265 | 151 | 316 | 1.08e-49 | 170 |
| Msa1457340 | AT2G31370.1 | 59.880 | 167 | 56 | 3 | 109 | 265 | 151 | 316 | 1.08e-49 | 170 |
| Msa1457340 | AT2G31370.7 | 59.880 | 167 | 56 | 3 | 109 | 265 | 151 | 316 | 1.08e-49 | 170 |
| Msa1457340 | AT2G31370.3 | 59.880 | 167 | 56 | 3 | 109 | 265 | 151 | 316 | 1.08e-49 | 170 |
| Msa1457340 | AT2G31370.6 | 59.880 | 167 | 56 | 3 | 109 | 265 | 151 | 316 | 1.08e-49 | 170 |
| Msa1457340 | AT4G38900.2 | 55.497 | 191 | 62 | 5 | 73 | 243 | 299 | 486 | 3.97e-49 | 172 |
| Msa1457340 | AT4G38900.3 | 55.497 | 191 | 62 | 5 | 73 | 243 | 299 | 486 | 3.97e-49 | 172 |
| Msa1457340 | AT2G40620.1 | 46.000 | 250 | 110 | 8 | 2 | 243 | 8 | 240 | 4.37e-49 | 167 |
| Msa1457340 | AT4G38900.1 | 53.807 | 197 | 62 | 6 | 73 | 243 | 299 | 492 | 1.22e-46 | 165 |
| Msa1457340 | AT1G06070.1 | 54.598 | 174 | 63 | 3 | 109 | 273 | 159 | 325 | 1.16e-45 | 160 |
| Msa1457340 | AT1G06850.1 | 62.791 | 129 | 47 | 1 | 123 | 251 | 121 | 248 | 2.35e-45 | 157 |
| Msa1457340 | AT2G21230.4 | 54.444 | 180 | 66 | 3 | 76 | 243 | 287 | 462 | 1.33e-44 | 159 |
| Msa1457340 | AT2G21230.1 | 54.444 | 180 | 66 | 3 | 76 | 243 | 287 | 462 | 1.33e-44 | 159 |
| Msa1457340 | AT2G21230.3 | 52.688 | 186 | 66 | 4 | 76 | 243 | 287 | 468 | 2.47e-42 | 153 |
| Msa1457340 | AT2G21230.2 | 53.846 | 169 | 62 | 3 | 76 | 232 | 287 | 451 | 3.72e-40 | 146 |
| Msa1457340 | AT1G06850.2 | 72.152 | 79 | 21 | 1 | 123 | 201 | 121 | 198 | 8.30e-28 | 108 |
| Msa1457340 | AT2G13150.1 | 35.503 | 169 | 93 | 4 | 83 | 244 | 83 | 242 | 6.54e-19 | 85.1 |
| Msa1457340 | AT2G42380.2 | 41.880 | 117 | 57 | 1 | 149 | 254 | 184 | 300 | 7.79e-19 | 85.9 |
| Msa1457340 | AT3G58120.1 | 47.368 | 95 | 50 | 0 | 149 | 243 | 200 | 294 | 1.29e-18 | 85.1 |
| Msa1457340 | AT2G12940.1 | 32.597 | 181 | 108 | 5 | 83 | 260 | 82 | 251 | 1.67e-17 | 81.6 |
| Msa1457340 | AT2G12900.1 | 38.235 | 102 | 62 | 1 | 143 | 244 | 109 | 209 | 2.94e-16 | 77.4 |
| Msa1457340 | AT2G42380.5 | 45.238 | 84 | 46 | 0 | 149 | 232 | 184 | 267 | 5.36e-15 | 73.9 |
| Msa1457340 | AT3G58120.2 | 45.679 | 81 | 44 | 0 | 149 | 229 | 200 | 280 | 5.50e-14 | 71.2 |
| Msa1457340 | AT1G58110.1 | 28.571 | 252 | 135 | 7 | 22 | 244 | 87 | 322 | 4.99e-13 | 69.3 |
| Msa1457340 | AT1G58110.2 | 28.571 | 252 | 135 | 7 | 22 | 244 | 87 | 322 | 4.99e-13 | 69.3 |
| Msa1457340 | AT2G42380.1 | 37.607 | 117 | 51 | 2 | 149 | 254 | 184 | 289 | 1.26e-12 | 67.8 |
| Msa1457340 | AT2G21235.1 | 38.235 | 102 | 62 | 1 | 151 | 252 | 359 | 459 | 2.27e-12 | 67.8 |
| Msa1457340 | AT2G42380.3 | 64.444 | 45 | 16 | 0 | 149 | 193 | 184 | 228 | 1.78e-11 | 63.5 |
| Msa1457340 | AT2G42380.4 | 64.444 | 45 | 16 | 0 | 149 | 193 | 184 | 228 | 1.78e-11 | 63.5 |
Find 107 sgRNAs with CRISPR-Local
Find 379 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATGCCAGGTTGTGTCTGC+TGG | 0.197022 | tig0038857:-11073 | None:intergenic |
| TATGTATCTTCTACAGTTTA+AGG | 0.243523 | tig0038857:+11287 | Msa1457340:three_prime_UTR |
| AAGACAATTTCCTCAACTTT+AGG | 0.254590 | tig0038857:+6015 | Msa1457340:five_prime_UTR |
| ATAAAACATCATAGGATTAA+AGG | 0.291195 | tig0038857:-11267 | None:intergenic |
| TTTACAGGATTCTTGCTAAT+AGG | 0.313599 | tig0038857:+7985 | Msa1457340:intron |
| TTGATTATAGATGGTGGTTA+TGG | 0.329209 | tig0038857:+11435 | Msa1457340:three_prime_UTR |
| TTGATCCTAAGAGAGCTAAA+AGG | 0.339939 | tig0038857:+6680 | Msa1457340:CDS |
| TGATTTGACTGCTCAGAATA+AGG | 0.343859 | tig0038857:+10355 | Msa1457340:CDS |
| CAACATCAAAGTAGATGATT+TGG | 0.347956 | tig0038857:+11178 | Msa1457340:three_prime_UTR |
| GGGTTAGGGTTTGGTGGTGA+AGG | 0.352329 | tig0038857:+6520 | Msa1457340:CDS |
| TGCAGAAAGTACAAAATAAT+AGG | 0.358743 | tig0038857:-11321 | None:intergenic |
| AACTAGTTGTTGATTATAGA+TGG | 0.367093 | tig0038857:+11426 | Msa1457340:three_prime_UTR |
| TATATATACAACATGTTACT+TGG | 0.381317 | tig0038857:-11219 | None:intergenic |
| TGGGAACTTGGAAGTGGTGG+TGG | 0.383969 | tig0038857:-6145 | None:intergenic |
| GCTGGTAATCCTTCATTTAA+CGG | 0.384795 | tig0038857:+10993 | Msa1457340:CDS |
| TTTGATGGGTTAGGGTTTGG+TGG | 0.386396 | tig0038857:+6514 | Msa1457340:CDS |
| CTGGTAATCCTTCATTTAAC+GGG | 0.387737 | tig0038857:+10994 | Msa1457340:CDS |
| TGTTGTATACGAGCTACTTT+TGG | 0.392286 | tig0038857:-11160 | None:intergenic |
| AATCATTTGACTGCCGTTGC+TGG | 0.392785 | tig0038857:+10975 | Msa1457340:CDS |
| TGCACAACTTACAGTCCTTC+AGG | 0.397567 | tig0038857:+8103 | Msa1457340:CDS |
| AGAAAGAACTTCAACGCCTT+AGG | 0.400050 | tig0038857:+10943 | Msa1457340:CDS |
| TTGTGTTTGTGTTGGGAACT+TGG | 0.400932 | tig0038857:-6157 | None:intergenic |
| CTGAGTGAGAACGGCGGTGG+TGG | 0.401141 | tig0038857:-6309 | None:intergenic |
| CATGCCAGGTTGTGTCTGCT+GGG | 0.407431 | tig0038857:-11072 | None:intergenic |
| TCGTGGTCGCTCTAACTTCA+TGG | 0.412681 | tig0038857:+11127 | Msa1457340:CDS |
| GAACTTGGAAGTGGTGGTGG+TGG | 0.415472 | tig0038857:-6142 | None:intergenic |
| GTTTGGTGGTGAAGGGGAAA+AGG | 0.416147 | tig0038857:+6528 | Msa1457340:CDS |
| GTTAGGGTTTGGTGGTGAAG+GGG | 0.427763 | tig0038857:+6522 | Msa1457340:CDS |
| TCCATGGATGGGTCTGAGAT+GGG | 0.439417 | tig0038857:+6589 | Msa1457340:CDS |
| GAAGATACATAAAACATCAT+AGG | 0.440019 | tig0038857:-11275 | None:intergenic |
| AACATTTACAACATGTTATG+TGG | 0.441333 | tig0038857:-11460 | None:intergenic |
| TTTGTGTTTGTGTTTGTGTT+GGG | 0.443221 | tig0038857:-6164 | None:intergenic |
| TTCCATGGATGGGTCTGAGA+TGG | 0.446734 | tig0038857:+6588 | Msa1457340:CDS |
| GGTTGTGTCTGCTGGGGTTG+AGG | 0.447864 | tig0038857:-11065 | None:intergenic |
| GAGATGGGGTTGTTTGAAGT+TGG | 0.453490 | tig0038857:+6604 | Msa1457340:CDS |
| GGTTAGGGTTTGGTGGTGAA+GGG | 0.457604 | tig0038857:+6521 | Msa1457340:CDS |
| TGTTGGGAACTTGGAAGTGG+TGG | 0.461042 | tig0038857:-6148 | None:intergenic |
| GAACGAGAAGGTGGCATGCC+AGG | 0.461585 | tig0038857:-11086 | None:intergenic |
| ACAGCGTCAGGGGATGGAAG+AGG | 0.465529 | tig0038857:-6409 | None:intergenic |
| GTTTGTGTTTGTGTTTGTGT+TGG | 0.469600 | tig0038857:-6165 | None:intergenic |
| GAAAGAACTTCAACGCCTTA+GGG | 0.472203 | tig0038857:+10944 | Msa1457340:CDS |
| AACAAGTGTTGTAATGAGAA+TGG | 0.479395 | tig0038857:-6060 | None:intergenic |
| AGGGGATGGAAGAGGGAGGT+TGG | 0.483008 | tig0038857:-6401 | None:intergenic |
| ATCCCCTGACGCTGTCCCGA+TGG | 0.491064 | tig0038857:+6417 | Msa1457340:CDS |
| GGAAAAGGTTGAAGAGAGGA+AGG | 0.492873 | tig0038857:+6543 | Msa1457340:CDS |
| TTGTGTTGGGAACTTGGAAG+TGG | 0.495070 | tig0038857:-6151 | None:intergenic |
| AAGTCAATTATAACTGGTGG+TGG | 0.495733 | tig0038857:-6259 | None:intergenic |
| ATCGGGACAGCGTCAGGGGA+TGG | 0.496167 | tig0038857:-6415 | None:intergenic |
| AGAGGAAGGTGAGTAGACAT+AGG | 0.498750 | tig0038857:+6557 | Msa1457340:CDS |
| CGTCGAAGTTTGCTGCGAAA+CGG | 0.501035 | tig0038857:-6342 | None:intergenic |
| GAGAACATCCCGTTAAATGA+AGG | 0.504928 | tig0038857:-11002 | None:intergenic |
| AGTGGTGGTGGTGGTTGAAG+TGG | 0.505855 | tig0038857:-6133 | None:intergenic |
| CGGTGGTGGGTCCCACGTGA+TGG | 0.512907 | tig0038857:-6295 | None:intergenic |
| AGAGCGACCACGACCGTTGA+AGG | 0.516566 | tig0038857:-11117 | None:intergenic |
| GATCAACCCTTCAACGGTCG+TGG | 0.516911 | tig0038857:+11110 | Msa1457340:CDS |
| CAACCCCAGCAGACACAACC+TGG | 0.516981 | tig0038857:+11068 | Msa1457340:CDS |
| AACTCGATATACAAGTGAGC+TGG | 0.519563 | tig0038857:+8037 | Msa1457340:CDS |
| ATGAGAATGGAACTTGACTT+TGG | 0.521390 | tig0038857:-6047 | None:intergenic |
| CAGCGTCAGGGGATGGAAGA+GGG | 0.521431 | tig0038857:-6408 | None:intergenic |
| GGGTTGTTTGAAGTTGGTGA+TGG | 0.524705 | tig0038857:+6610 | Msa1457340:CDS |
| TGGACTCATCAGAGTCCATC+GGG | 0.530528 | tig0038857:-6432 | None:intergenic |
| CATCGGGAAGTCAGCGTCAG+AGG | 0.531841 | tig0038857:+6453 | Msa1457340:CDS |
| AAGGGGAAAAGGTTGAAGAG+AGG | 0.535836 | tig0038857:+6539 | Msa1457340:CDS |
| AGGATTACTCATCTGTTGCA+TGG | 0.537744 | tig0038857:-11045 | None:intergenic |
| GTCGAAGTCGGACGGGTCGA+AGG | 0.538001 | tig0038857:-6374 | None:intergenic |
| TGAGTGAGAACGGCGGTGGT+GGG | 0.539319 | tig0038857:-6308 | None:intergenic |
| AGTTCAGCAAGTTTCTCAGC+CGG | 0.541555 | tig0038857:-6649 | None:intergenic |
| AGGTATAGTAGTTCCATGGA+TGG | 0.543947 | tig0038857:+6577 | Msa1457340:CDS |
| TGGACTCTGATGAGTCCATC+GGG | 0.544487 | tig0038857:+6437 | Msa1457340:CDS |
| TGGTGGGTCCCACGTGATGG+TGG | 0.546686 | tig0038857:-6292 | None:intergenic |
| AAGCTTTGCTTGTTGCTCGA+AGG | 0.549248 | tig0038857:-10399 | None:intergenic |
| CCCCATCTCAGACCCATCCA+TGG | 0.549369 | tig0038857:-6590 | None:intergenic |
| CGTTCTGATCAACCCTTCAA+CGG | 0.556715 | tig0038857:+11104 | Msa1457340:CDS |
| TCTAAGTCAATTATAACTGG+TGG | 0.559887 | tig0038857:-6262 | None:intergenic |
| TGGAGATGTCGAAGTCGGAC+GGG | 0.562741 | tig0038857:-6381 | None:intergenic |
| TTGGAGATGTCGAAGTCGGA+CGG | 0.562969 | tig0038857:-6382 | None:intergenic |
| GGAAGTCAGCGTCAGAGGGA+CGG | 0.567008 | tig0038857:+6458 | Msa1457340:CDS |
| CCATGGATGGGTCTGAGATG+GGG | 0.569336 | tig0038857:+6590 | Msa1457340:CDS |
| GAGCGACCACGACCGTTGAA+GGG | 0.569915 | tig0038857:-11116 | None:intergenic |
| ATATATACAACATGTTACTT+GGG | 0.571912 | tig0038857:-11218 | None:intergenic |
| ACATAGGTATAGTAGTTCCA+TGG | 0.575020 | tig0038857:+6573 | Msa1457340:CDS |
| AGTCCATCGGGACAGCGTCA+GGG | 0.578916 | tig0038857:-6420 | None:intergenic |
| AGTCGGACGGGTCGAAGGTG+AGG | 0.583026 | tig0038857:-6369 | None:intergenic |
| ATGGACTCTGATGAGTCCAT+CGG | 0.585619 | tig0038857:+6436 | Msa1457340:CDS |
| GCATCTCAGGAGTTTGTCTG+TGG | 0.588489 | tig0038857:+6480 | Msa1457340:CDS |
| ATGGACTCATCAGAGTCCAT+CGG | 0.588783 | tig0038857:-6433 | None:intergenic |
| TAGTTGTTGATTATAGATGG+TGG | 0.590796 | tig0038857:+11429 | Msa1457340:three_prime_UTR |
| GATATACAAGTGAGCTGGAG+AGG | 0.598508 | tig0038857:+8042 | Msa1457340:CDS |
| AGGTGGTGTCTGAGTGAGAA+CGG | 0.599071 | tig0038857:-6318 | None:intergenic |
| CAACAAGCAAAGCTTAGAGA+AGG | 0.603588 | tig0038857:+10407 | Msa1457340:CDS |
| GGTATAGTAGTTCCATGGAT+GGG | 0.613894 | tig0038857:+6578 | Msa1457340:CDS |
| ATGCCAGGTTGTGTCTGCTG+GGG | 0.624742 | tig0038857:-11071 | None:intergenic |
| GAGGTTGGAGATGTCGAAGT+CGG | 0.627116 | tig0038857:-6386 | None:intergenic |
| GAAAACATGCCACCATCACG+TGG | 0.629605 | tig0038857:+6283 | Msa1457340:CDS |
| GAAGTTTGCTGCGAAACGGA+AGG | 0.630495 | tig0038857:-6338 | None:intergenic |
| AAATGAAGGATTACCAGCAA+CGG | 0.634361 | tig0038857:-10988 | None:intergenic |
| GGTTGATCAGAACGAGAAGG+TGG | 0.636519 | tig0038857:-11095 | None:intergenic |
| CTGCTGCACGATCAAAAGAG+AGG | 0.636521 | tig0038857:+8012 | Msa1457340:CDS |
| TGGTGTGAAGAAATCTATGC+CGG | 0.640871 | tig0038857:+6630 | Msa1457340:CDS |
| TGTCTGAGTGAGAACGGCGG+TGG | 0.649339 | tig0038857:-6312 | None:intergenic |
| AAGGGTTGATCAGAACGAGA+AGG | 0.662505 | tig0038857:-11098 | None:intergenic |
| CGTCAGGGGATGGAAGAGGG+AGG | 0.669132 | tig0038857:-6405 | None:intergenic |
| GTTTGCTGCGAAACGGAAGG+TGG | 0.671587 | tig0038857:-6335 | None:intergenic |
| ATTCTGAGCAGTCAAATCAG+TGG | 0.697438 | tig0038857:-10351 | None:intergenic |
| GGACTGTAAGTTGTGCAGAG+AGG | 0.716589 | tig0038857:-8097 | None:intergenic |
| AAAACATGCCACCATCACGT+GGG | 0.739972 | tig0038857:+6284 | Msa1457340:CDS |
| TGGTGTCTGAGTGAGAACGG+CGG | 0.821224 | tig0038857:-6315 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATTTTTAGTTTTTCTTA+TGG | + | tig0038857:6213-6232 | Msa1457340:exon | 10.0% |
| !! | TTATTTATGTACTAAATTTA+AGG | + | tig0038857:6779-6798 | Msa1457340:intron | 10.0% |
| !! | GTAAACGTATATATAATTTA+CGG | - | tig0038857:7477-7496 | None:intergenic | 15.0% |
| !!! | TTATTTTGTAATGGATAATT+TGG | + | tig0038857:7799-7818 | Msa1457340:intron | 15.0% |
| !!! | CATAAATTTGATTTTATTTC+TGG | - | tig0038857:9436-9455 | None:intergenic | 15.0% |
| !!! | ACAAAATTTAGTAATTTTCT+TGG | + | tig0038857:9802-9821 | Msa1457340:intron | 15.0% |
| !!! | TTTTCTAAGTCAATTATAAC+TGG | - | tig0038857:6268-6287 | None:intergenic | 20.0% |
| !! | ATATAAGTTTAATGAGTATG+TGG | + | tig0038857:6859-6878 | Msa1457340:intron | 20.0% |
| !! | AAATTGTATGTGTTTATGAT+CGG | + | tig0038857:7110-7129 | Msa1457340:intron | 20.0% |
| !! | AAAAAACATCATCAAACAAA+GGG | - | tig0038857:7853-7872 | None:intergenic | 20.0% |
| !! | TAAACAATTTAACATGAACA+CGG | - | tig0038857:7889-7908 | None:intergenic | 20.0% |
| !! | ATACATACAAATGTATAGTT+TGG | + | tig0038857:8375-8394 | Msa1457340:intron | 20.0% |
| !! | ATTTGTATGATAATCGATAA+GGG | - | tig0038857:8793-8812 | None:intergenic | 20.0% |
| !! | ATGCAATTATAATCAAAATG+AGG | - | tig0038857:8932-8951 | None:intergenic | 20.0% |
| !! | CAGAAAAATCTTATATGATA+TGG | - | tig0038857:9325-9344 | None:intergenic | 20.0% |
| !! | AAGATACTGTGATTAATTTA+TGG | - | tig0038857:9518-9537 | None:intergenic | 20.0% |
| !! | AACAAGATGATAAATAGTTT+AGG | + | tig0038857:9751-9770 | Msa1457340:intron | 20.0% |
| !! | TAAATAGTTTAGGCTATTAT+AGG | + | tig0038857:9761-9780 | Msa1457340:intron | 20.0% |
| !! | AAATGTGCAAAAGAATAAAA+AGG | + | tig0038857:10291-10310 | Msa1457340:intron | 20.0% |
| !! | TTCAATAAAGATGTGATAAA+GGG | - | tig0038857:10483-10502 | None:intergenic | 20.0% |
| !! | ATTCAATAAAGATGTGATAA+AGG | - | tig0038857:10484-10503 | None:intergenic | 20.0% |
| !! | TTATCACATCTTTATTGAAT+TGG | + | tig0038857:10484-10503 | Msa1457340:intron | 20.0% |
| !!! | TTGTAGCATAGTTTTAAAAA+AGG | - | tig0038857:10591-10610 | None:intergenic | 20.0% |
| !! | TTATCTAAATACGTTAGATA+GGG | - | tig0038857:10698-10717 | None:intergenic | 20.0% |
| !! | TTACCATTTAAATATGAACA+TGG | + | tig0038857:10883-10902 | Msa1457340:intron | 20.0% |
| !!! | ATATATACAACATGTTACTT+GGG | - | tig0038857:11221-11240 | None:intergenic | 20.0% |
| !! | TATATATACAACATGTTACT+TGG | - | tig0038857:11222-11241 | None:intergenic | 20.0% |
| !! | ATAAAACATCATAGGATTAA+AGG | - | tig0038857:11270-11289 | None:intergenic | 20.0% |
| !! | ACTGAAAAACAAATTTCAAA+GGG | - | tig0038857:11368-11387 | None:intergenic | 20.0% |
| !! | AACTGAAAAACAAATTTCAA+AGG | - | tig0038857:11369-11388 | None:intergenic | 20.0% |
| !!! | TCACTTTTTGAAGTTTGTTT+TGG | + | tig0038857:6744-6763 | Msa1457340:intron | 25.0% |
| ! | GTTAAGAAACATTGAGTTTA+GGG | + | tig0038857:7000-7019 | Msa1457340:intron | 25.0% |
| !! | ACTTCTCTTAAAGTTTTTCT+AGG | - | tig0038857:7227-7246 | None:intergenic | 25.0% |
| ! | TTAATAAACCATCGTAAGTA+GGG | - | tig0038857:7624-7643 | None:intergenic | 25.0% |
| ! | TTTAATAAACCATCGTAAGT+AGG | - | tig0038857:7625-7644 | None:intergenic | 25.0% |
| !! | TCCTATACATATGGAATTTT+TGG | + | tig0038857:7704-7723 | Msa1457340:intron | 25.0% |
| ! | ACCAAAAATTCCATATGTAT+AGG | - | tig0038857:7708-7727 | None:intergenic | 25.0% |
| !!! | ACGTGTGTTTTATTTTGTAA+TGG | + | tig0038857:7790-7809 | Msa1457340:intron | 25.0% |
| ! | GAAAAAACATCATCAAACAA+AGG | - | tig0038857:7854-7873 | None:intergenic | 25.0% |
| ! | GGTTTGAATTATGTAGAATT+TGG | + | tig0038857:7935-7954 | Msa1457340:intron | 25.0% |
| ! | GAATTATGTAGAATTTGGTT+TGG | + | tig0038857:7940-7959 | Msa1457340:intron | 25.0% |
| ! | AATGTTGTATGTTTGTTTAC+AGG | + | tig0038857:7970-7989 | Msa1457340:intron | 25.0% |
| ! | ATCTACATCATTGTTAAAGA+TGG | - | tig0038857:8230-8249 | None:intergenic | 25.0% |
| ! | TTCAGTGTAATCATATGTAT+TGG | - | tig0038857:8518-8537 | None:intergenic | 25.0% |
| ! | TTTGTATGATAATCGATAAG+GGG | - | tig0038857:8792-8811 | None:intergenic | 25.0% |
| ! | GATTTGTATGATAATCGATA+AGG | - | tig0038857:8794-8813 | None:intergenic | 25.0% |
| ! | TATTAAGCGTTCAATGAAAT+AGG | + | tig0038857:8828-8847 | Msa1457340:intron | 25.0% |
| ! | ATTAAGCGTTCAATGAAATA+GGG | + | tig0038857:8829-8848 | Msa1457340:intron | 25.0% |
| !! | CTTTGAAAATGTAGAAAGTA+GGG | - | tig0038857:9015-9034 | None:intergenic | 25.0% |
| !! | ACTTTGAAAATGTAGAAAGT+AGG | - | tig0038857:9016-9035 | None:intergenic | 25.0% |
| !! | AAAAAACTTCCTTTTTATCC+TGG | - | tig0038857:9122-9141 | None:intergenic | 25.0% |
| !!! | ATCTTTTAGTTAGGAAAACA+TGG | - | tig0038857:9232-9251 | None:intergenic | 25.0% |
| ! | AATCTTATATGATATGGTGA+AGG | - | tig0038857:9319-9338 | None:intergenic | 25.0% |
| !! | CTTTTTATATGCCAATTTTG+TGG | + | tig0038857:9535-9554 | Msa1457340:intron | 25.0% |
| !! | ACTTTGAAAAAGGCATAAAT+AGG | - | tig0038857:9652-9671 | None:intergenic | 25.0% |
| !! | GTTGTAATGAACTTTGAAAA+AGG | - | tig0038857:9662-9681 | None:intergenic | 25.0% |
| ! | AAAAATATCTGTCTTAAGGA+TGG | - | tig0038857:10046-10065 | None:intergenic | 25.0% |
| ! | ACTCAAAAATATCTGTCTTA+AGG | - | tig0038857:10050-10069 | None:intergenic | 25.0% |
| !!! | ACAGATATTTTTGAGTAAAG+TGG | + | tig0038857:10054-10073 | Msa1457340:intron | 25.0% |
| ! | CATCTAAAAATCACATGAAA+AGG | - | tig0038857:10151-10170 | None:intergenic | 25.0% |
| !!! | CTTTTCATGTGATTTTTAGA+TGG | + | tig0038857:10149-10168 | Msa1457340:intron | 25.0% |
| ! | ATCATAGATATTTGATGAGT+TGG | - | tig0038857:10194-10213 | None:intergenic | 25.0% |
| ! | TCAATAAAGATGTGATAAAG+GGG | - | tig0038857:10482-10501 | None:intergenic | 25.0% |
| !! | TATTGAATTGGACTAGAAAA+AGG | + | tig0038857:10496-10515 | Msa1457340:intron | 25.0% |
| ! | TAAAACTATGCTACAAAAGT+TGG | + | tig0038857:10595-10614 | Msa1457340:intron | 25.0% |
| !! | TTTTGCATCATTTACGATTT+TGG | + | tig0038857:10643-10662 | Msa1457340:intron | 25.0% |
| !! | TCGGATATTTTCAAAACTAA+GGG | - | tig0038857:10670-10689 | None:intergenic | 25.0% |
| !! | ATCGGATATTTTCAAAACTA+AGG | - | tig0038857:10671-10690 | None:intergenic | 25.0% |
| ! | CTTATCTAAATACGTTAGAT+AGG | - | tig0038857:10699-10718 | None:intergenic | 25.0% |
| !!! | GTTGCTTTTGTGATATAAAT+CGG | + | tig0038857:10766-10785 | Msa1457340:intron | 25.0% |
| ! | TTCAAGCAATGATATTTCTT+TGG | - | tig0038857:10821-10840 | None:intergenic | 25.0% |
| ! | TAGCCATGTTCATATTTAAA+TGG | - | tig0038857:10889-10908 | None:intergenic | 25.0% |
| ! | GAAGATACATAAAACATCAT+AGG | - | tig0038857:11278-11297 | None:intergenic | 25.0% |
| ! | TATGTATCTTCTACAGTTTA+AGG | + | tig0038857:11287-11306 | Msa1457340:three_prime_UTR | 25.0% |
| !! | TGCAGAAAGTACAAAATAAT+AGG | - | tig0038857:11324-11343 | None:intergenic | 25.0% |
| !!! | AAATTTGTTTTTCAGTTCTC+TGG | + | tig0038857:11372-11391 | Msa1457340:three_prime_UTR | 25.0% |
| !! | AACTAGTTGTTGATTATAGA+TGG | + | tig0038857:11426-11445 | Msa1457340:three_prime_UTR | 25.0% |
| ! | AACATTTACAACATGTTATG+TGG | - | tig0038857:11463-11482 | None:intergenic | 25.0% |
| AAGACAATTTCCTCAACTTT+AGG | + | tig0038857:6015-6034 | Msa1457340:five_prime_UTR | 30.0% | |
| !!! | GTTTTGTTTACCTAAAGTTG+AGG | - | tig0038857:6028-6047 | None:intergenic | 30.0% |
| ! | AACAAGTGTTGTAATGAGAA+TGG | - | tig0038857:6063-6082 | None:intergenic | 30.0% |
| TTTGTGTTTGTGTTTGTGTT+GGG | - | tig0038857:6167-6186 | None:intergenic | 30.0% | |
| TCTAAGTCAATTATAACTGG+TGG | - | tig0038857:6265-6284 | None:intergenic | 30.0% | |
| !!! | TGGATTCAGAGTTTTTTGAT+GGG | + | tig0038857:6500-6519 | Msa1457340:CDS | 30.0% |
| !!! | ATAAACCTTTTAGCTCTCTT+AGG | - | tig0038857:6688-6707 | None:intergenic | 30.0% |
| GGTTAAGAAACATTGAGTTT+AGG | + | tig0038857:6999-7018 | Msa1457340:intron | 30.0% | |
| AGAGAGAAGATTATGTAGTT+AGG | + | tig0038857:7153-7172 | Msa1457340:intron | 30.0% | |
| TGTCAAATTACTACAAGTAG+AGG | + | tig0038857:7197-7216 | Msa1457340:intron | 30.0% | |
| ! | TTTACCTAATTTGTGAGTCA+TGG | + | tig0038857:7492-7511 | Msa1457340:intron | 30.0% |
| TTAACCATGACTCACAAATT+AGG | - | tig0038857:7499-7518 | None:intergenic | 30.0% | |
| CGATTCTAAGTTTAGAAGTT+TGG | + | tig0038857:7667-7686 | Msa1457340:intron | 30.0% | |
| ! | AAGTTTAGAAGTTTGGAATC+TGG | + | tig0038857:7674-7693 | Msa1457340:intron | 30.0% |
| GGAAGTTAATCCTATACATA+TGG | + | tig0038857:7695-7714 | Msa1457340:intron | 30.0% | |
| !! | TTGCAGTTGATTCTAAGATT+AGG | + | tig0038857:7912-7931 | Msa1457340:intron | 30.0% |
| !! | TGCAGTTGATTCTAAGATTA+GGG | + | tig0038857:7913-7932 | Msa1457340:intron | 30.0% |
| TTTACAGGATTCTTGCTAAT+AGG | + | tig0038857:7985-8004 | Msa1457340:intron | 30.0% | |
| AAAGGAAATAACATACCTGA+AGG | - | tig0038857:8121-8140 | None:intergenic | 30.0% | |
| TTCAGAACAGTGAAATGAAA+AGG | - | tig0038857:8139-8158 | None:intergenic | 30.0% | |
| TGTTTGTAACATGTTCTTGT+TGG | + | tig0038857:8188-8207 | Msa1457340:intron | 30.0% | |
| ACATCATTGTTAAAGATGGA+GGG | - | tig0038857:8226-8245 | None:intergenic | 30.0% | |
| TACATCATTGTTAAAGATGG+AGG | - | tig0038857:8227-8246 | None:intergenic | 30.0% | |
| GCATATACTTGGTATTATGT+GGG | - | tig0038857:8303-8322 | None:intergenic | 30.0% | |
| TGCATATACTTGGTATTATG+TGG | - | tig0038857:8304-8323 | None:intergenic | 30.0% | |
| GGTTGTAACGCAAATTATAT+AGG | - | tig0038857:8430-8449 | None:intergenic | 30.0% | |
| ! | GTAATCATATGTATTGGTGT+CGG | - | tig0038857:8512-8531 | None:intergenic | 30.0% |
| GAAAAGTTCAGATGATATGT+AGG | - | tig0038857:8678-8697 | None:intergenic | 30.0% | |
| ! | TTCACATTCCTCTTTTATCA+AGG | + | tig0038857:8706-8725 | Msa1457340:intron | 30.0% |
| ! | TCACATTCCTCTTTTATCAA+GGG | + | tig0038857:8707-8726 | Msa1457340:intron | 30.0% |
| TTAAGTAGTCTCAGGTTTAA+TGG | - | tig0038857:8892-8911 | None:intergenic | 30.0% | |
| TGGAAATATAAGCACGTAAT+TGG | - | tig0038857:9073-9092 | None:intergenic | 30.0% | |
| ! | TCCACAAAATTTTACGTAGA+TGG | + | tig0038857:9089-9108 | Msa1457340:intron | 30.0% |
| ! | ACCATCTACGTAAAATTTTG+TGG | - | tig0038857:9093-9112 | None:intergenic | 30.0% |
| CAATCATGCTTACGAAAAAT+TGG | + | tig0038857:9187-9206 | Msa1457340:intron | 30.0% | |
| TCATCACAATACCACAAAAT+TGG | - | tig0038857:9549-9568 | None:intergenic | 30.0% | |
| TTCTACTAAAGTGACGTAAA+AGG | - | tig0038857:9616-9635 | None:intergenic | 30.0% | |
| CTTAAAACGACAACTACAAA+GGG | + | tig0038857:9838-9857 | Msa1457340:intron | 30.0% | |
| TTAAAACGACAACTACAAAG+GGG | + | tig0038857:9839-9858 | Msa1457340:intron | 30.0% | |
| TCAAGGATTATTCCATTTAG+TGG | + | tig0038857:9878-9897 | Msa1457340:intron | 30.0% | |
| TCAATAGTCAGAAAACTCAA+AGG | - | tig0038857:9915-9934 | None:intergenic | 30.0% | |
| ! | TGACTATTGACTATGTTAGA+GGG | + | tig0038857:9925-9944 | Msa1457340:intron | 30.0% |
| !! | CATGTGATTTTTAGATGGAT+AGG | + | tig0038857:10154-10173 | Msa1457340:intron | 30.0% |
| !!! | AAGCAAAATCCACTTTTTGA+TGG | - | tig0038857:10458-10477 | None:intergenic | 30.0% |
| !! | AGTTGGCTTAAATACAGTTT+TGG | + | tig0038857:10612-10631 | Msa1457340:intron | 30.0% |
| TACGTTAGATAGGGAAAAAT+CGG | - | tig0038857:10689-10708 | None:intergenic | 30.0% | |
| !!! | GCAAAAGTGTTTTGCAAAAA+TGG | - | tig0038857:10850-10869 | None:intergenic | 30.0% |
| CAACATCAAAGTAGATGATT+TGG | + | tig0038857:11178-11197 | Msa1457340:three_prime_UTR | 30.0% | |
| !! | TGTACTTTCTGCAGTTTTAT+AGG | + | tig0038857:11331-11350 | Msa1457340:three_prime_UTR | 30.0% |
| ! | TAGTTGTTGATTATAGATGG+TGG | + | tig0038857:11429-11448 | Msa1457340:three_prime_UTR | 30.0% |
| ! | TTGATTATAGATGGTGGTTA+TGG | + | tig0038857:11435-11454 | Msa1457340:three_prime_UTR | 30.0% |
| ATGAGAATGGAACTTGACTT+TGG | - | tig0038857:6050-6069 | None:intergenic | 35.0% | |
| GTTTGTGTTTGTGTTTGTGT+TGG | - | tig0038857:6168-6187 | None:intergenic | 35.0% | |
| ! | GGTTTTCTTGTGAAGTTGTT+TGG | - | tig0038857:6241-6260 | None:intergenic | 35.0% |
| AAGTCAATTATAACTGGTGG+TGG | - | tig0038857:6262-6281 | None:intergenic | 35.0% | |
| !!! | GTGGATTCAGAGTTTTTTGA+TGG | + | tig0038857:6499-6518 | Msa1457340:CDS | 35.0% |
| !!! | TCAGAGTTTTTTGATGGGTT+AGG | + | tig0038857:6505-6524 | Msa1457340:CDS | 35.0% |
| !!! | CAGAGTTTTTTGATGGGTTA+GGG | + | tig0038857:6506-6525 | Msa1457340:CDS | 35.0% |
| !!! | TTTTTTGATGGGTTAGGGTT+TGG | + | tig0038857:6511-6530 | Msa1457340:CDS | 35.0% |
| ACATAGGTATAGTAGTTCCA+TGG | + | tig0038857:6573-6592 | Msa1457340:CDS | 35.0% | |
| TTGATCCTAAGAGAGCTAAA+AGG | + | tig0038857:6680-6699 | Msa1457340:CDS | 35.0% | |
| TGAGATAGTAGGATAAGACT+TGG | + | tig0038857:6932-6951 | Msa1457340:intron | 35.0% | |
| ! | GTGACTTAATTTGACTCAGT+TGG | + | tig0038857:6978-6997 | Msa1457340:intron | 35.0% |
| AAGAAACATTGAGTTTAGGG+TGG | + | tig0038857:7003-7022 | Msa1457340:intron | 35.0% | |
| ! | AGAAACATTGAGTTTAGGGT+GGG | + | tig0038857:7004-7023 | Msa1457340:intron | 35.0% |
| TAAAGAAACCATCGCGAATA+GGG | - | tig0038857:7087-7106 | None:intergenic | 35.0% | |
| TTAAAGAAACCATCGCGAAT+AGG | - | tig0038857:7088-7107 | None:intergenic | 35.0% | |
| ! | TATGTGTTTATGATCGGCTT+AGG | + | tig0038857:7116-7135 | Msa1457340:intron | 35.0% |
| ! | ATGTGTTTATGATCGGCTTA+GGG | + | tig0038857:7117-7136 | Msa1457340:intron | 35.0% |
| AGTTAGGAGAGTAAATCAGA+TGG | + | tig0038857:7169-7188 | Msa1457340:intron | 35.0% | |
| AGTCTCTAACTGAAGTTTGT+CGG | + | tig0038857:7430-7449 | Msa1457340:intron | 35.0% | |
| ! | TTAAGCAGTGTTGAGTTTGT+GGG | + | tig0038857:7515-7534 | Msa1457340:intron | 35.0% |
| AGTCTCGTACTAAAGTTTCT+TGG | + | tig0038857:7567-7586 | Msa1457340:intron | 35.0% | |
| GTCTCGTACTAAAGTTTCTT+GGG | + | tig0038857:7568-7587 | Msa1457340:intron | 35.0% | |
| TGACTAAAACCAATCGTGTT+TGG | + | tig0038857:7731-7750 | Msa1457340:intron | 35.0% | |
| GACTAAAACCAATCGTGTTT+GGG | + | tig0038857:7732-7751 | Msa1457340:intron | 35.0% | |
| ATCAAATTCCCAAACACGAT+TGG | - | tig0038857:7743-7762 | None:intergenic | 35.0% | |
| !! | GCAGTTGATTCTAAGATTAG+GGG | + | tig0038857:7914-7933 | Msa1457340:intron | 35.0% |
| TTGTAACATGTTCTTGTTGG+TGG | + | tig0038857:8191-8210 | Msa1457340:intron | 35.0% | |
| !! | ATGTTCTTGTTGGTGGTTTA+TGG | + | tig0038857:8198-8217 | Msa1457340:intron | 35.0% |
| ACATGCAACATGCATATACT+TGG | - | tig0038857:8314-8333 | None:intergenic | 35.0% | |
| TATGCATGTTGCATGTGTAT+AGG | + | tig0038857:8318-8337 | Msa1457340:intron | 35.0% | |
| CTGTACTCATAACTTTGAAC+TGG | + | tig0038857:8644-8663 | Msa1457340:intron | 35.0% | |
| ! | CACATTCCTCTTTTATCAAG+GGG | + | tig0038857:8708-8727 | Msa1457340:intron | 35.0% |
| ! | ACATTCCTCTTTTATCAAGG+GGG | + | tig0038857:8709-8728 | Msa1457340:intron | 35.0% |
| AATTACCCCCTTGATAAAAG+AGG | - | tig0038857:8717-8736 | None:intergenic | 35.0% | |
| GTTTCAGATTAAGTAGTCTC+AGG | - | tig0038857:8900-8919 | None:intergenic | 35.0% | |
| ! | ATTATCCGTCTTCTGTTTTG+TGG | + | tig0038857:8950-8969 | Msa1457340:intron | 35.0% |
| CTAAACCACAAAACAGAAGA+CGG | - | tig0038857:8958-8977 | None:intergenic | 35.0% | |
| ! | AATTTTACGTAGATGGTCCT+AGG | + | tig0038857:9096-9115 | Msa1457340:intron | 35.0% |
| TGAATCGAGGAAAATAGGAT+TGG | - | tig0038857:9161-9180 | None:intergenic | 35.0% | |
| !! | CTGCAGTACATCTTTTAGTT+AGG | - | tig0038857:9241-9260 | None:intergenic | 35.0% |
| TGAAGGCTCGACTTATAATT+AGG | - | tig0038857:9302-9321 | None:intergenic | 35.0% | |
| CCTACTTCAACGATGTAAAA+TGG | - | tig0038857:9351-9370 | None:intergenic | 35.0% | |
| ! | CCATTTTACATCGTTGAAGT+AGG | + | tig0038857:9348-9367 | Msa1457340:intron | 35.0% |
| TTTACATCGTTGAAGTAGGT+TGG | + | tig0038857:9352-9371 | Msa1457340:intron | 35.0% | |
| ! | TTTTCTGATCCATAATCCGA+TGG | + | tig0038857:9379-9398 | Msa1457340:intron | 35.0% |
| TAATAACTAACTGTCGCTAC+TGG | + | tig0038857:9456-9475 | Msa1457340:intron | 35.0% | |
| !!! | CCTTTGTAGTTGTCGTTTTA+AGG | - | tig0038857:9840-9859 | None:intergenic | 35.0% |
| CCTTAAAACGACAACTACAA+AGG | + | tig0038857:9837-9856 | Msa1457340:intron | 35.0% | |
| GAACTAAGAAGACCACTAAA+TGG | - | tig0038857:9893-9912 | None:intergenic | 35.0% | |
| ! | CTGACTATTGACTATGTTAG+AGG | + | tig0038857:9924-9943 | Msa1457340:intron | 35.0% |
| GAGTAAAGTGGTAATTATCC+AGG | + | tig0038857:10066-10085 | Msa1457340:intron | 35.0% | |
| TCTGTAATCCAACAAACCAA+GGG | - | tig0038857:10110-10129 | None:intergenic | 35.0% | |
| ATCTGTAATCCAACAAACCA+AGG | - | tig0038857:10111-10130 | None:intergenic | 35.0% | |
| !! | GTGATTTTTAGATGGATAGG+TGG | + | tig0038857:10157-10176 | Msa1457340:intron | 35.0% |
| ! | AGATATTTGATGAGTTGGAG+TGG | - | tig0038857:10189-10208 | None:intergenic | 35.0% |
| TGATTTGACTGCTCAGAATA+AGG | + | tig0038857:10355-10374 | Msa1457340:CDS | 35.0% | |
| TTTCTCGATCCATCAAAAAG+TGG | + | tig0038857:10446-10465 | Msa1457340:intron | 35.0% | |
| CGTAAATGATGCAAAATAGC+AGG | - | tig0038857:10639-10658 | None:intergenic | 35.0% | |
| AAAGTGTGACATTGTCTAAG+TGG | - | tig0038857:10739-10758 | None:intergenic | 35.0% | |
| GCTGGTAATCCTTCATTTAA+CGG | + | tig0038857:10993-11012 | Msa1457340:CDS | 35.0% | |
| CTGGTAATCCTTCATTTAAC+GGG | + | tig0038857:10994-11013 | Msa1457340:CDS | 35.0% | |
| !! | TGTTGTATACGAGCTACTTT+TGG | - | tig0038857:11163-11182 | None:intergenic | 35.0% |
| !! | TTTGTTTTTCAGTTCTCTGG+TGG | + | tig0038857:11375-11394 | Msa1457340:three_prime_UTR | 35.0% |
| ! | AGAAGAGAGAGAGAGTTTTC+AGG | - | tig0038857:6107-6126 | None:intergenic | 40.0% |
| TTGTGTTTGTGTTGGGAACT+TGG | - | tig0038857:6160-6179 | None:intergenic | 40.0% | |
| AGGTATAGTAGTTCCATGGA+TGG | + | tig0038857:6577-6596 | Msa1457340:CDS | 40.0% | |
| GGTATAGTAGTTCCATGGAT+GGG | + | tig0038857:6578-6597 | Msa1457340:CDS | 40.0% | |
| TGGTGTGAAGAAATCTATGC+CGG | + | tig0038857:6630-6649 | Msa1457340:CDS | 40.0% | |
| ACTATCTCAAGTCAGCTACA+TGG | - | tig0038857:6921-6940 | None:intergenic | 40.0% | |
| !! | TGTAGCTGACTTGAGATAGT+AGG | + | tig0038857:6921-6940 | Msa1457340:intron | 40.0% |
| ! | GAAACATTGAGTTTAGGGTG+GGG | + | tig0038857:7005-7024 | Msa1457340:intron | 40.0% |
| ! | AAACATTGAGTTTAGGGTGG+GGG | + | tig0038857:7006-7025 | Msa1457340:intron | 40.0% |
| TAGGAGAGTAAATCAGATGG+AGG | + | tig0038857:7172-7191 | Msa1457340:intron | 40.0% | |
| AGGAGAGTAAATCAGATGGA+GGG | + | tig0038857:7173-7192 | Msa1457340:intron | 40.0% | |
| ATGTAATGTACCCCACTTAG+TGG | + | tig0038857:7297-7316 | Msa1457340:intron | 40.0% | |
| TGTAATGTACCCCACTTAGT+GGG | + | tig0038857:7298-7317 | Msa1457340:intron | 40.0% | |
| AACTGTAATCCCACTAAGTG+GGG | - | tig0038857:7310-7329 | None:intergenic | 40.0% | |
| CAACTGTAATCCCACTAAGT+GGG | - | tig0038857:7311-7330 | None:intergenic | 40.0% | |
| TCAACTGTAATCCCACTAAG+TGG | - | tig0038857:7312-7331 | None:intergenic | 40.0% | |
| GTCTCTAACTGAAGTTTGTC+GGG | + | tig0038857:7431-7450 | Msa1457340:intron | 40.0% | |
| ! | GTTAAGCAGTGTTGAGTTTG+TGG | + | tig0038857:7514-7533 | Msa1457340:intron | 40.0% |
| GTCAAATACCCTACTTACGA+TGG | + | tig0038857:7613-7632 | Msa1457340:intron | 40.0% | |
| AACTCGATATACAAGTGAGC+TGG | + | tig0038857:8037-8056 | Msa1457340:CDS | 40.0% | |
| !!! | TCAGATTTTGAGTTGTGACC+CGG | + | tig0038857:8259-8278 | Msa1457340:intron | 40.0% |
| TTCCATAAACAGTTGTGACC+GGG | - | tig0038857:8280-8299 | None:intergenic | 40.0% | |
| GTTCCATAAACAGTTGTGAC+CGG | - | tig0038857:8281-8300 | None:intergenic | 40.0% | |
| GTTGCATGTGTATAGGTACT+AGG | + | tig0038857:8325-8344 | Msa1457340:intron | 40.0% | |
| CATGTGTATAGGTACTAGGT+AGG | + | tig0038857:8329-8348 | Msa1457340:intron | 40.0% | |
| AGTACAGTGTCCAAATGCAA+GGG | - | tig0038857:8631-8650 | None:intergenic | 40.0% | |
| TGGTTCACAATCAGAATCAG+TGG | - | tig0038857:8872-8891 | None:intergenic | 40.0% | |
| GGGAAGATGTTTAATGACAC+TGG | - | tig0038857:8995-9014 | None:intergenic | 40.0% | |
| ! | TCGAGGAAAATAGGATTGGT+TGG | - | tig0038857:9157-9176 | None:intergenic | 40.0% |
| ACAGCTGAATCGAGGAAAAT+AGG | - | tig0038857:9166-9185 | None:intergenic | 40.0% | |
| GCTCGACTTATAATTAGGCA+TGG | - | tig0038857:9297-9316 | None:intergenic | 40.0% | |
| GATTCTTTGTGTATTCCGTC+TGG | + | tig0038857:9589-9608 | Msa1457340:intron | 40.0% | |
| GAGCAATGTTGGAATTCTCA+AGG | + | tig0038857:9861-9880 | Msa1457340:intron | 40.0% | |
| AGGGCTTTCTTCCATAATAC+TGG | + | tig0038857:9944-9963 | Msa1457340:intron | 40.0% | |
| GGGCTTTCTTCCATAATACT+GGG | + | tig0038857:9945-9964 | Msa1457340:intron | 40.0% | |
| TCCATAATACTGGGAGAGAT+TGG | + | tig0038857:9954-9973 | Msa1457340:intron | 40.0% | |
| CTGTAATCCAACAAACCAAG+GGG | - | tig0038857:10109-10128 | None:intergenic | 40.0% | |
| ! | TTTGATGAGTTGGAGTGGTT+GGG | - | tig0038857:10184-10203 | None:intergenic | 40.0% |
| ! | ATTTGATGAGTTGGAGTGGT+TGG | - | tig0038857:10185-10204 | None:intergenic | 40.0% |
| ATTCTGAGCAGTCAAATCAG+TGG | - | tig0038857:10354-10373 | None:intergenic | 40.0% | |
| CAACAAGCAAAGCTTAGAGA+AGG | + | tig0038857:10407-10426 | Msa1457340:CDS | 40.0% | |
| AGAAAGAACTTCAACGCCTT+AGG | + | tig0038857:10943-10962 | Msa1457340:CDS | 40.0% | |
| GAAAGAACTTCAACGCCTTA+GGG | + | tig0038857:10944-10963 | Msa1457340:CDS | 40.0% | |
| ! | AATGATTCTTTTGCGCCCTA+AGG | - | tig0038857:10962-10981 | None:intergenic | 40.0% |
| GAGAACATCCCGTTAAATGA+AGG | - | tig0038857:11005-11024 | None:intergenic | 40.0% | |
| AGGATTACTCATCTGTTGCA+TGG | - | tig0038857:11048-11067 | None:intergenic | 40.0% | |
| !!! | GAGAGAGTTTTCAGGTGGTT+GGG | - | tig0038857:6099-6118 | None:intergenic | 45.0% |
| !!! | AGAGAGAGTTTTCAGGTGGT+TGG | - | tig0038857:6100-6119 | None:intergenic | 45.0% |
| !! | AGAGAGAGAGAGTTTTCAGG+TGG | - | tig0038857:6104-6123 | None:intergenic | 45.0% |
| TTGTGTTGGGAACTTGGAAG+TGG | - | tig0038857:6154-6173 | None:intergenic | 45.0% | |
| AAAACATGCCACCATCACGT+GGG | + | tig0038857:6284-6303 | Msa1457340:CDS | 45.0% | |
| ATGGACTCATCAGAGTCCAT+CGG | - | tig0038857:6436-6455 | None:intergenic | 45.0% | |
| ATGGACTCTGATGAGTCCAT+CGG | + | tig0038857:6436-6455 | Msa1457340:CDS | 45.0% | |
| !! | TTTGATGGGTTAGGGTTTGG+TGG | + | tig0038857:6514-6533 | Msa1457340:CDS | 45.0% |
| AAGGGGAAAAGGTTGAAGAG+AGG | + | tig0038857:6539-6558 | Msa1457340:CDS | 45.0% | |
| GGAAAAGGTTGAAGAGAGGA+AGG | + | tig0038857:6543-6562 | Msa1457340:CDS | 45.0% | |
| AGAGGAAGGTGAGTAGACAT+AGG | + | tig0038857:6557-6576 | Msa1457340:CDS | 45.0% | |
| ! | GAGATGGGGTTGTTTGAAGT+TGG | + | tig0038857:6604-6623 | Msa1457340:CDS | 45.0% |
| !! | GGGTTGTTTGAAGTTGGTGA+TGG | + | tig0038857:6610-6629 | Msa1457340:CDS | 45.0% |
| AGTTCAGCAAGTTTCTCAGC+CGG | - | tig0038857:6652-6671 | None:intergenic | 45.0% | |
| ! | AACATTGAGTTTAGGGTGGG+GGG | + | tig0038857:7007-7026 | Msa1457340:intron | 45.0% |
| ! | TATGATCGGCTTAGGGAGTT+TGG | + | tig0038857:7124-7143 | Msa1457340:intron | 45.0% |
| ! | ATGATCGGCTTAGGGAGTTT+GGG | + | tig0038857:7125-7144 | Msa1457340:intron | 45.0% |
| TGTAGCCAATCTCTGTGACT+CGG | + | tig0038857:7344-7363 | Msa1457340:intron | 45.0% | |
| GTTAAGCGACACTCAGTTTG+TGG | + | tig0038857:7370-7389 | Msa1457340:intron | 45.0% | |
| AAGTTTGTCGGGATACTCTG+AGG | + | tig0038857:7442-7461 | Msa1457340:intron | 45.0% | |
| GGATACTATGACGAGCATCT+GGG | + | tig0038857:7589-7608 | Msa1457340:intron | 45.0% | |
| GATATACAAGTGAGCTGGAG+AGG | + | tig0038857:8042-8061 | Msa1457340:CDS | 45.0% | |
| TGCACAACTTACAGTCCTTC+AGG | + | tig0038857:8103-8122 | Msa1457340:CDS | 45.0% | |
| GCGTTACAACCTATGAAGCA+CGG | + | tig0038857:8439-8458 | Msa1457340:intron | 45.0% | |
| AACGACACATGTTCGACAAC+AGG | - | tig0038857:8487-8506 | None:intergenic | 45.0% | |
| AACCTATGAAGCACAGACAC+AGG | - | tig0038857:8597-8616 | None:intergenic | 45.0% | |
| GAGTACAGTGTCCAAATGCA+AGG | - | tig0038857:8632-8651 | None:intergenic | 45.0% | |
| ! | CTTCCTTTTTATCCTGGCCT+AGG | - | tig0038857:9116-9135 | None:intergenic | 45.0% |
| ATGATTGCACAGCTGAATCG+AGG | - | tig0038857:9174-9193 | None:intergenic | 45.0% | |
| !! | AAAGGAGTGCCATCGGATTA+TGG | - | tig0038857:9391-9410 | None:intergenic | 45.0% |
| AGTGACGTAAAAGGACCAGA+CGG | - | tig0038857:9607-9626 | None:intergenic | 45.0% | |
| ACTACAAAGGGGAGCAATGT+TGG | + | tig0038857:9850-9869 | Msa1457340:intron | 45.0% | |
| GCCAATCTCTCCCAGTATTA+TGG | - | tig0038857:9958-9977 | None:intergenic | 45.0% | |
| TGAAATTAACAGCGTGCGAG+AGG | - | tig0038857:10254-10273 | None:intergenic | 45.0% | |
| ! | AAGCTTTGCTTGTTGCTCGA+AGG | - | tig0038857:10402-10421 | None:intergenic | 45.0% |
| ! | AAGGGTTGATCAGAACGAGA+AGG | - | tig0038857:11101-11120 | None:intergenic | 45.0% |
| CGTTCTGATCAACCCTTCAA+CGG | + | tig0038857:11104-11123 | Msa1457340:CDS | 45.0% | |
| TGTTGGGAACTTGGAAGTGG+TGG | - | tig0038857:6151-6170 | None:intergenic | 50.0% | |
| GAAAACATGCCACCATCACG+TGG | + | tig0038857:6283-6302 | Msa1457340:CDS | 50.0% | |
| AGGTGGTGTCTGAGTGAGAA+CGG | - | tig0038857:6321-6340 | None:intergenic | 50.0% | |
| !! | GAAGTTTGCTGCGAAACGGA+AGG | - | tig0038857:6341-6360 | None:intergenic | 50.0% |
| !! | CGTCGAAGTTTGCTGCGAAA+CGG | - | tig0038857:6345-6364 | None:intergenic | 50.0% |
| TTGGAGATGTCGAAGTCGGA+CGG | - | tig0038857:6385-6404 | None:intergenic | 50.0% | |
| GAGGTTGGAGATGTCGAAGT+CGG | - | tig0038857:6389-6408 | None:intergenic | 50.0% | |
| TGGACTCATCAGAGTCCATC+GGG | - | tig0038857:6435-6454 | None:intergenic | 50.0% | |
| TGGACTCTGATGAGTCCATC+GGG | + | tig0038857:6437-6456 | Msa1457340:CDS | 50.0% | |
| GCATCTCAGGAGTTTGTCTG+TGG | + | tig0038857:6480-6499 | Msa1457340:CDS | 50.0% | |
| !! | GGTTAGGGTTTGGTGGTGAA+GGG | + | tig0038857:6521-6540 | Msa1457340:CDS | 50.0% |
| !! | GTTAGGGTTTGGTGGTGAAG+GGG | + | tig0038857:6522-6541 | Msa1457340:CDS | 50.0% |
| !! | GTTTGGTGGTGAAGGGGAAA+AGG | + | tig0038857:6528-6547 | Msa1457340:CDS | 50.0% |
| TTCCATGGATGGGTCTGAGA+TGG | + | tig0038857:6588-6607 | Msa1457340:CDS | 50.0% | |
| ! | TCCATGGATGGGTCTGAGAT+GGG | + | tig0038857:6589-6608 | Msa1457340:CDS | 50.0% |
| ACCATCGCGAATAGGGTCTT+TGG | - | tig0038857:7080-7099 | None:intergenic | 50.0% | |
| ACCAACCGAGTCACAGAGAT+TGG | - | tig0038857:7352-7371 | None:intergenic | 50.0% | |
| AAGCGACACTCAGTTTGTGG+TGG | + | tig0038857:7373-7392 | Msa1457340:intron | 50.0% | |
| AGCGACACTCAGTTTGTGGT+GGG | + | tig0038857:7374-7393 | Msa1457340:intron | 50.0% | |
| GGAGGACTGAGGTTTGAACT+CGG | + | tig0038857:7397-7416 | Msa1457340:intron | 50.0% | |
| ! | AGCAGTGTTGAGTTTGTGGG+TGG | + | tig0038857:7518-7537 | Msa1457340:intron | 50.0% |
| !! | TTGAGTTTGTGGGTGGACTG+AGG | + | tig0038857:7525-7544 | Msa1457340:intron | 50.0% |
| GGGATACTATGACGAGCATC+TGG | + | tig0038857:7588-7607 | Msa1457340:intron | 50.0% | |
| CTGCTGCACGATCAAAAGAG+AGG | + | tig0038857:8012-8031 | Msa1457340:CDS | 50.0% | |
| GGACTGTAAGTTGTGCAGAG+AGG | - | tig0038857:8100-8119 | None:intergenic | 50.0% | |
| GACCCGGTCACAACTGTTTA+TGG | + | tig0038857:8275-8294 | Msa1457340:intron | 50.0% | |
| GTCCTGTGTCTGTGCTTCAT+AGG | + | tig0038857:8592-8611 | Msa1457340:intron | 50.0% | |
| CTACACGCTTCCCTTGCATT+TGG | + | tig0038857:8618-8637 | Msa1457340:intron | 50.0% | |
| GGTCCTAGGCCAGGATAAAA+AGG | + | tig0038857:9110-9129 | Msa1457340:intron | 50.0% | |
| !! | ACCATGGAAAGGAGTGCCAT+CGG | - | tig0038857:9398-9417 | None:intergenic | 50.0% |
| ATCCAGGCATTCAACCCACA+TGG | + | tig0038857:10082-10101 | Msa1457340:intron | 50.0% | |
| ACAAACCAAGGGGACCATGT+GGG | - | tig0038857:10099-10118 | None:intergenic | 50.0% | |
| AACAAACCAAGGGGACCATG+TGG | - | tig0038857:10100-10119 | None:intergenic | 50.0% | |
| !! | ACATGGTCCCCTTGGTTTGT+TGG | + | tig0038857:10099-10118 | Msa1457340:intron | 50.0% |
| GGTTGATCAGAACGAGAAGG+TGG | - | tig0038857:11098-11117 | None:intergenic | 50.0% | |
| TCGTGGTCGCTCTAACTTCA+TGG | + | tig0038857:11127-11146 | Msa1457340:CDS | 50.0% | |
| !! | AGTGGTGGTGGTGGTTGAAG+TGG | - | tig0038857:6136-6155 | None:intergenic | 55.0% |
| !! | GAACTTGGAAGTGGTGGTGG+TGG | - | tig0038857:6145-6164 | None:intergenic | 55.0% |
| TGGGAACTTGGAAGTGGTGG+TGG | - | tig0038857:6148-6167 | None:intergenic | 55.0% | |
| TGGTGTCTGAGTGAGAACGG+CGG | - | tig0038857:6318-6337 | None:intergenic | 55.0% | |
| ! | GTTTGCTGCGAAACGGAAGG+TGG | - | tig0038857:6338-6357 | None:intergenic | 55.0% |
| TGGAGATGTCGAAGTCGGAC+GGG | - | tig0038857:6384-6403 | None:intergenic | 55.0% | |
| ATCGGGAAGTCAGCGTCAGA+GGG | + | tig0038857:6454-6473 | Msa1457340:CDS | 55.0% | |
| !! | GGGTTAGGGTTTGGTGGTGA+AGG | + | tig0038857:6520-6539 | Msa1457340:CDS | 55.0% |
| ! | CCATGGATGGGTCTGAGATG+GGG | + | tig0038857:6590-6609 | Msa1457340:CDS | 55.0% |
| ! | ATTGAGTTTAGGGTGGGGGG+AGG | + | tig0038857:7010-7029 | Msa1457340:intron | 55.0% |
| ! | TTGAGTTTAGGGTGGGGGGA+GGG | + | tig0038857:7011-7030 | Msa1457340:intron | 55.0% |
| !! | GGTTTGTTGGGGGTGCTCTA+AGG | + | tig0038857:7042-7061 | Msa1457340:intron | 55.0% |
| GCCAAAGACCCTATTCGCGA+TGG | + | tig0038857:7076-7095 | Msa1457340:intron | 55.0% | |
| !! | GCCAATCTCTGTGACTCGGT+TGG | + | tig0038857:7348-7367 | Msa1457340:intron | 55.0% |
| GCGACACTCAGTTTGTGGTG+GGG | + | tig0038857:7375-7394 | Msa1457340:intron | 55.0% | |
| CGACACTCAGTTTGTGGTGG+GGG | + | tig0038857:7376-7395 | Msa1457340:intron | 55.0% | |
| !! | GAGGAGTGTCCGTGCTTCAT+AGG | - | tig0038857:8451-8470 | None:intergenic | 55.0% |
| ATGAAGCACGGACACTCCTC+AGG | + | tig0038857:8451-8470 | Msa1457340:intron | 55.0% | |
| AACAGGACACGCCTAACCTG+AGG | - | tig0038857:8470-8489 | None:intergenic | 55.0% | |
| TACGTAGATGGTCCTAGGCC+AGG | + | tig0038857:9101-9120 | Msa1457340:intron | 55.0% | |
| TCCGATGGCACTCCTTTCCA+TGG | + | tig0038857:9394-9413 | Msa1457340:intron | 55.0% | |
| CACTCCTTTCCATGGTGCAG+CGG | + | tig0038857:9402-9421 | Msa1457340:intron | 55.0% | |
| ! | GACCATGTGGGTTGAATGCC+TGG | - | tig0038857:10087-10106 | None:intergenic | 55.0% |
| TTCAACCCACATGGTCCCCT+TGG | + | tig0038857:10091-10110 | Msa1457340:intron | 55.0% | |
| ATGCCAGGTTGTGTCTGCTG+GGG | - | tig0038857:11074-11093 | None:intergenic | 55.0% | |
| CATGCCAGGTTGTGTCTGCT+GGG | - | tig0038857:11075-11094 | None:intergenic | 55.0% | |
| GATCAACCCTTCAACGGTCG+TGG | + | tig0038857:11110-11129 | Msa1457340:CDS | 55.0% | |
| TGAGTGAGAACGGCGGTGGT+GGG | - | tig0038857:6311-6330 | None:intergenic | 60.0% | |
| TGTCTGAGTGAGAACGGCGG+TGG | - | tig0038857:6315-6334 | None:intergenic | 60.0% | |
| AGGGGATGGAAGAGGGAGGT+TGG | - | tig0038857:6404-6423 | None:intergenic | 60.0% | |
| CAGCGTCAGGGGATGGAAGA+GGG | - | tig0038857:6411-6430 | None:intergenic | 60.0% | |
| ACAGCGTCAGGGGATGGAAG+AGG | - | tig0038857:6412-6431 | None:intergenic | 60.0% | |
| AGTCCATCGGGACAGCGTCA+GGG | - | tig0038857:6423-6442 | None:intergenic | 60.0% | |
| !! | CTCTGACGCTGACTTCCCGA+TGG | - | tig0038857:6455-6474 | None:intergenic | 60.0% |
| CATCGGGAAGTCAGCGTCAG+AGG | + | tig0038857:6453-6472 | Msa1457340:CDS | 60.0% | |
| GGAAGTCAGCGTCAGAGGGA+CGG | + | tig0038857:6458-6477 | Msa1457340:CDS | 60.0% | |
| CCCCATCTCAGACCCATCCA+TGG | - | tig0038857:6593-6612 | None:intergenic | 60.0% | |
| ! | TGAGTTTAGGGTGGGGGGAG+GGG | + | tig0038857:7012-7031 | Msa1457340:intron | 60.0% |
| !! | AGGGGGCGCTGAGGTTTGTT+GGG | + | tig0038857:7030-7049 | Msa1457340:intron | 60.0% |
| ! | CACTCAGTTTGTGGTGGGGG+AGG | + | tig0038857:7379-7398 | Msa1457340:intron | 60.0% |
| ! | TTTGTGGTGGGGGAGGACTG+AGG | + | tig0038857:7386-7405 | Msa1457340:intron | 60.0% |
| GCACGGACACTCCTCAGGTT+AGG | + | tig0038857:8456-8475 | Msa1457340:intron | 60.0% | |
| CATGCCGCTGCACCATGGAA+AGG | - | tig0038857:9409-9428 | None:intergenic | 60.0% | |
| GGTTGTGTCTGCTGGGGTTG+AGG | - | tig0038857:11068-11087 | None:intergenic | 60.0% | |
| CAACCCCAGCAGACACAACC+TGG | + | tig0038857:11068-11087 | Msa1457340:CDS | 60.0% | |
| GCATGCCAGGTTGTGTCTGC+TGG | - | tig0038857:11076-11095 | None:intergenic | 60.0% | |
| GAACGAGAAGGTGGCATGCC+AGG | - | tig0038857:11089-11108 | None:intergenic | 60.0% | |
| GAGCGACCACGACCGTTGAA+GGG | - | tig0038857:11119-11138 | None:intergenic | 60.0% | |
| AGAGCGACCACGACCGTTGA+AGG | - | tig0038857:11120-11139 | None:intergenic | 60.0% | |
| ! | TGGTGGGTCCCACGTGATGG+TGG | - | tig0038857:6295-6314 | None:intergenic | 65.0% |
| CTGAGTGAGAACGGCGGTGG+TGG | - | tig0038857:6312-6331 | None:intergenic | 65.0% | |
| AGTCGGACGGGTCGAAGGTG+AGG | - | tig0038857:6372-6391 | None:intergenic | 65.0% | |
| GTCGAAGTCGGACGGGTCGA+AGG | - | tig0038857:6377-6396 | None:intergenic | 65.0% | |
| CGTCAGGGGATGGAAGAGGG+AGG | - | tig0038857:6408-6427 | None:intergenic | 65.0% | |
| ATCGGGACAGCGTCAGGGGA+TGG | - | tig0038857:6418-6437 | None:intergenic | 65.0% | |
| ATCCCCTGACGCTGTCCCGA+TGG | + | tig0038857:6417-6436 | Msa1457340:CDS | 65.0% | |
| GTCCATCGGGACAGCGTCAG+GGG | - | tig0038857:6422-6441 | None:intergenic | 65.0% | |
| GAGTCCATCGGGACAGCGTC+AGG | - | tig0038857:6424-6443 | None:intergenic | 65.0% | |
| CGTCAGAGGGACGGCATCTC+AGG | + | tig0038857:6467-6486 | Msa1457340:CDS | 65.0% | |
| ! | GAGTTTAGGGTGGGGGGAGG+GGG | + | tig0038857:7013-7032 | Msa1457340:intron | 65.0% |
| !! | GAGGGGGCGCTGAGGTTTGT+TGG | + | tig0038857:7029-7048 | Msa1457340:intron | 65.0% |
| !! | GGGGGCGCTGAGGTTTGTTG+GGG | + | tig0038857:7031-7050 | Msa1457340:intron | 65.0% |
| !! | GGGGCGCTGAGGTTTGTTGG+GGG | + | tig0038857:7032-7051 | Msa1457340:intron | 65.0% |
| !! | GGGGTGCTCTAAGGCGTGTC+TGG | + | tig0038857:7051-7070 | Msa1457340:intron | 65.0% |
| GCACTCATGCCGCTGCACCA+TGG | - | tig0038857:9414-9433 | None:intergenic | 65.0% | |
| !! | CGGTGGTGGGTCCCACGTGA+TGG | - | tig0038857:6298-6317 | None:intergenic | 70.0% |
| !!! | GGTGGGGGGAGGGGGCGCTG+AGG | + | tig0038857:7021-7040 | Msa1457340:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0038857 | gene | 5990 | 11495 | 5990 | ID=Msa1457340;Name=Msa1457340 |
| tig0038857 | mRNA | 5990 | 11495 | 5990 | ID=Msa1457340-mRNA-1;Parent=Msa1457340;Name=Msa1457340-mRNA-1;_AED=0.04;_eAED=0.04;_QI=242|1|1|1|1|1|4|326|310 |
| tig0038857 | exon | 5990 | 6701 | 5990 | ID=Msa1457340-mRNA-1:exon:21077;Parent=Msa1457340-mRNA-1 |
| tig0038857 | exon | 7992 | 8124 | 7992 | ID=Msa1457340-mRNA-1:exon:21078;Parent=Msa1457340-mRNA-1 |
| tig0038857 | exon | 10344 | 10428 | 10344 | ID=Msa1457340-mRNA-1:exon:21079;Parent=Msa1457340-mRNA-1 |
| tig0038857 | exon | 10925 | 11495 | 10925 | ID=Msa1457340-mRNA-1:exon:21080;Parent=Msa1457340-mRNA-1 |
| tig0038857 | five_prime_UTR | 5990 | 6231 | 5990 | ID=Msa1457340-mRNA-1:five_prime_utr;Parent=Msa1457340-mRNA-1 |
| tig0038857 | CDS | 6232 | 6701 | 6232 | ID=Msa1457340-mRNA-1:cds;Parent=Msa1457340-mRNA-1 |
| tig0038857 | CDS | 7992 | 8124 | 7992 | ID=Msa1457340-mRNA-1:cds;Parent=Msa1457340-mRNA-1 |
| tig0038857 | CDS | 10344 | 10428 | 10344 | ID=Msa1457340-mRNA-1:cds;Parent=Msa1457340-mRNA-1 |
| tig0038857 | CDS | 10925 | 11169 | 10925 | ID=Msa1457340-mRNA-1:cds;Parent=Msa1457340-mRNA-1 |
| tig0038857 | three_prime_UTR | 11170 | 11495 | 11170 | ID=Msa1457340-mRNA-1:three_prime_utr;Parent=Msa1457340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
