Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1464190 | XP_024628855.1 | 83.642 | 324 | 23 | 1 | 1 | 294 | 1 | 324 | 0.0 | 537 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1464190 | sp|Q0WPY0|TLP6_ARATH | 38.393 | 336 | 111 | 9 | 50 | 290 | 69 | 403 | 1.26e-56 | 190 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1464190 | A0A396GTK9 | 83.951 | 324 | 22 | 2 | 1 | 294 | 1 | 324 | 0.0 | 532 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1464190 | TF | TUB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1464190 | MtrunA17_Chr8g0373341 | 83.951 | 324 | 22 | 2 | 1 | 294 | 1 | 324 | 0.0 | 532 |
| Msa1464190 | MtrunA17_Chr8g0373001 | 59.512 | 205 | 45 | 4 | 1 | 167 | 1 | 205 | 1.79e-68 | 218 |
| Msa1464190 | MtrunA17_Chr8g0373001 | 60.000 | 125 | 49 | 1 | 166 | 290 | 279 | 402 | 5.64e-41 | 146 |
| Msa1464190 | MtrunA17_Chr1g0155301 | 39.225 | 413 | 127 | 12 | 1 | 290 | 1 | 412 | 3.24e-68 | 218 |
| Msa1464190 | MtrunA17_Chr8g0373331 | 39.669 | 363 | 128 | 10 | 1 | 290 | 1 | 345 | 1.24e-63 | 204 |
| Msa1464190 | MtrunA17_Chr8g0373361 | 56.281 | 199 | 53 | 3 | 1 | 167 | 11 | 207 | 3.22e-63 | 204 |
| Msa1464190 | MtrunA17_Chr8g0373361 | 47.656 | 128 | 58 | 3 | 166 | 290 | 281 | 402 | 3.17e-23 | 98.6 |
| Msa1464190 | MtrunA17_Chr5g0404321 | 51.208 | 207 | 61 | 5 | 1 | 167 | 1 | 207 | 1.35e-55 | 185 |
| Msa1464190 | MtrunA17_Chr5g0404321 | 51.181 | 127 | 59 | 2 | 166 | 290 | 281 | 406 | 1.84e-30 | 118 |
| Msa1464190 | MtrunA17_Chr2g0315641 | 36.842 | 323 | 123 | 6 | 49 | 291 | 41 | 362 | 3.77e-52 | 175 |
| Msa1464190 | MtrunA17_Chr8g0373351 | 35.556 | 315 | 116 | 8 | 32 | 290 | 1 | 284 | 8.63e-42 | 145 |
| Msa1464190 | MtrunA17_Chr2g0315651 | 35.030 | 334 | 135 | 10 | 38 | 290 | 25 | 357 | 1.54e-40 | 144 |
| Msa1464190 | MtrunA17_Chr2g0278511 | 37.333 | 225 | 101 | 5 | 1 | 185 | 1 | 225 | 8.48e-34 | 127 |
| Msa1464190 | MtrunA17_Chr2g0278511 | 46.465 | 99 | 46 | 2 | 198 | 290 | 320 | 417 | 1.23e-17 | 82.4 |
| Msa1464190 | MtrunA17_Chr1g0201891 | 36.744 | 215 | 93 | 5 | 1 | 174 | 1 | 213 | 2.42e-31 | 121 |
| Msa1464190 | MtrunA17_Chr1g0201891 | 45.545 | 101 | 42 | 3 | 202 | 290 | 322 | 421 | 4.72e-15 | 75.1 |
| Msa1464190 | MtrunA17_Chr2g0286441 | 42.484 | 153 | 53 | 3 | 50 | 167 | 39 | 191 | 3.68e-31 | 120 |
| Msa1464190 | MtrunA17_Chr2g0286441 | 53.571 | 84 | 36 | 3 | 207 | 290 | 303 | 383 | 7.18e-18 | 83.2 |
| Msa1464190 | MtrunA17_Chr1g0196071 | 35.047 | 214 | 98 | 6 | 1 | 176 | 1 | 211 | 7.62e-30 | 116 |
| Msa1464190 | MtrunA17_Chr1g0196071 | 51.546 | 97 | 43 | 3 | 194 | 290 | 300 | 392 | 1.71e-19 | 87.8 |
| Msa1464190 | MtrunA17_Chr1g0156151 | 38.393 | 224 | 93 | 6 | 1 | 182 | 1 | 221 | 1.32e-29 | 112 |
| Msa1464190 | MtrunA17_Chr3g0091401 | 47.436 | 78 | 35 | 3 | 85 | 160 | 31 | 104 | 1.10e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1464190 | AT1G47270.3 | 38.393 | 336 | 111 | 9 | 50 | 290 | 44 | 378 | 7.62e-58 | 190 |
| Msa1464190 | AT1G47270.1 | 38.393 | 336 | 111 | 9 | 50 | 290 | 69 | 403 | 1.29e-57 | 190 |
| Msa1464190 | AT1G47270.2 | 38.393 | 336 | 111 | 9 | 50 | 290 | 68 | 402 | 1.73e-57 | 190 |
| Msa1464190 | AT1G53320.1 | 37.195 | 328 | 119 | 7 | 50 | 291 | 44 | 370 | 1.76e-53 | 179 |
| Msa1464190 | AT2G18280.2 | 41.797 | 256 | 96 | 8 | 1 | 215 | 1 | 244 | 5.17e-46 | 160 |
| Msa1464190 | AT2G18280.2 | 47.541 | 122 | 58 | 3 | 169 | 290 | 268 | 383 | 9.54e-24 | 100 |
| Msa1464190 | AT2G18280.1 | 41.797 | 256 | 96 | 8 | 1 | 215 | 1 | 244 | 5.17e-46 | 160 |
| Msa1464190 | AT2G18280.1 | 47.541 | 122 | 58 | 3 | 169 | 290 | 268 | 383 | 9.54e-24 | 100 |
| Msa1464190 | AT2G47900.2 | 38.235 | 204 | 88 | 4 | 1 | 166 | 1 | 204 | 2.38e-35 | 132 |
| Msa1464190 | AT2G47900.2 | 51.111 | 90 | 29 | 3 | 207 | 290 | 316 | 396 | 1.47e-17 | 82.4 |
| Msa1464190 | AT2G47900.1 | 38.235 | 204 | 88 | 4 | 1 | 166 | 1 | 204 | 2.38e-35 | 132 |
| Msa1464190 | AT2G47900.1 | 51.111 | 90 | 29 | 3 | 207 | 290 | 316 | 396 | 1.47e-17 | 82.4 |
| Msa1464190 | AT2G47900.3 | 37.073 | 205 | 90 | 4 | 1 | 166 | 1 | 205 | 4.20e-34 | 128 |
| Msa1464190 | AT2G47900.3 | 51.111 | 90 | 29 | 3 | 207 | 290 | 317 | 397 | 1.37e-17 | 82.8 |
| Msa1464190 | AT1G76900.2 | 44.444 | 153 | 49 | 3 | 50 | 166 | 57 | 209 | 8.32e-31 | 120 |
| Msa1464190 | AT1G76900.2 | 44.000 | 100 | 39 | 3 | 207 | 290 | 347 | 445 | 7.24e-15 | 74.7 |
| Msa1464190 | AT1G76900.1 | 44.444 | 153 | 49 | 3 | 50 | 166 | 57 | 209 | 8.32e-31 | 120 |
| Msa1464190 | AT1G76900.1 | 44.000 | 100 | 39 | 3 | 207 | 290 | 347 | 445 | 7.24e-15 | 74.7 |
| Msa1464190 | AT1G76900.3 | 44.444 | 153 | 49 | 3 | 50 | 166 | 57 | 209 | 8.32e-31 | 120 |
| Msa1464190 | AT1G76900.3 | 44.000 | 100 | 39 | 3 | 207 | 290 | 347 | 445 | 7.24e-15 | 74.7 |
| Msa1464190 | AT1G25280.1 | 41.361 | 191 | 71 | 5 | 50 | 204 | 59 | 244 | 4.41e-29 | 115 |
| Msa1464190 | AT1G25280.1 | 47.000 | 100 | 41 | 2 | 202 | 290 | 337 | 435 | 1.44e-16 | 79.7 |
| Msa1464190 | AT1G43640.1 | 36.318 | 201 | 84 | 6 | 13 | 177 | 26 | 218 | 1.53e-28 | 114 |
| Msa1464190 | AT1G43640.2 | 38.158 | 152 | 58 | 3 | 62 | 177 | 1 | 152 | 3.59e-23 | 98.2 |
| Msa1464190 | AT3G06380.1 | 35.088 | 171 | 72 | 5 | 29 | 163 | 15 | 182 | 7.56e-23 | 97.4 |
| Msa1464190 | AT3G06380.1 | 55.294 | 85 | 32 | 3 | 207 | 290 | 291 | 370 | 1.11e-18 | 85.5 |
| Msa1464190 | AT5G18680.1 | 37.333 | 150 | 58 | 4 | 50 | 163 | 39 | 188 | 3.20e-22 | 95.9 |
| Msa1464190 | AT5G18680.1 | 51.136 | 88 | 38 | 3 | 207 | 290 | 293 | 379 | 6.20e-17 | 80.5 |
| Msa1464190 | AT3G06380.2 | 54.762 | 84 | 34 | 2 | 207 | 290 | 199 | 278 | 5.12e-19 | 85.5 |
| Msa1464190 | AT3G06380.2 | 46.429 | 84 | 40 | 2 | 85 | 163 | 7 | 90 | 8.62e-18 | 82.0 |
| Msa1464190 | AT5G18680.2 | 46.739 | 92 | 44 | 2 | 77 | 163 | 5 | 96 | 6.77e-18 | 82.4 |
| Msa1464190 | AT5G18680.2 | 51.136 | 88 | 38 | 3 | 207 | 290 | 201 | 287 | 2.83e-17 | 80.5 |
| Msa1464190 | AT1G25280.3 | 44.545 | 110 | 49 | 2 | 192 | 290 | 149 | 257 | 2.62e-17 | 80.1 |
| Msa1464190 | AT1G25280.2 | 44.545 | 110 | 49 | 2 | 192 | 290 | 149 | 257 | 2.62e-17 | 80.1 |
Find 64 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTTGGAAGAGGTTTAAT+TGG | 0.210581 | tig0043948:+1786 | Msa1464190:intergenic |
| TTCTACATTTCTGTTGTATT+TGG | 0.211959 | tig0043948:-1419 | Msa1464190:CDS |
| ATCCGATACATTGCTTTATA+AGG | 0.216396 | tig0043948:-1456 | Msa1464190:CDS |
| TCTCACTCTCTTCAACCTTA+TGG | 0.240412 | tig0043948:+1721 | Msa1464190:intergenic |
| TGGTTGGTGCCCCGACTTCA+TGG | 0.253666 | tig0043948:-695 | Msa1464190:CDS |
| TTTCTCCTGGAGTGCGAAAA+TGG | 0.301102 | tig0043948:-606 | Msa1464190:CDS |
| TCTACCACGTGAATTGCTTT+TGG | 0.303093 | tig0043948:-1751 | Msa1464190:CDS |
| GTTGGACCTTCTTATCCTTT+TGG | 0.333127 | tig0043948:+1091 | Msa1464190:intergenic |
| AATGAGCCTCTGCTCAATTC+TGG | 0.343539 | tig0043948:+769 | Msa1464190:intergenic |
| ATGAGAGATTCATACTTTGC+AGG | 0.355432 | tig0043948:-805 | Msa1464190:CDS |
| AGACTTTCCCATTCTCCCTT+TGG | 0.363372 | tig0043948:+1771 | Msa1464190:intergenic |
| AAATGGCCAATCTTGCAATT+AGG | 0.381085 | tig0043948:-589 | Msa1464190:CDS |
| GCGCTTCCTAATTGCAAGAT+TGG | 0.386393 | tig0043948:+583 | Msa1464190:intergenic |
| TCAATTCTGGTAGCTTTGAT+AGG | 0.392242 | tig0043948:+782 | Msa1464190:intergenic |
| ACCTCTTCCAAAGGGAGAAT+GGG | 0.416873 | tig0043948:-1778 | Msa1464190:CDS |
| AACCTCTTCCAAAGGGAGAA+TGG | 0.426499 | tig0043948:-1779 | Msa1464190:CDS |
| TCCCATTCTCCCTTTGGAAG+AGG | 0.433706 | tig0043948:+1777 | Msa1464190:intergenic |
| TGTTGTTGTCGTTTGTGCTT+CGG | 0.448353 | tig0043948:-1679 | Msa1464190:intron |
| TTAACACGGCCCATGAAGTC+GGG | 0.459632 | tig0043948:+685 | Msa1464190:intergenic |
| TTCTTCTTCACCAGCACTGA+AGG | 0.461098 | tig0043948:-839 | Msa1464190:CDS |
| TGGAGCAAACACTCGCTCTC+AGG | 0.472497 | tig0043948:+1843 | Msa1464190:intergenic |
| ACGACAACAACAGCACGCGC+AGG | 0.482373 | tig0043948:+1690 | Msa1464190:intergenic |
| TTGAAGAGAGTGAGACATCT+TGG | 0.483464 | tig0043948:-1713 | Msa1464190:CDS |
| CGATCTCATAATGTTTCTCC+TGG | 0.484646 | tig0043948:-619 | Msa1464190:CDS |
| GGTTGGTGCCCCGACTTCAT+GGG | 0.487956 | tig0043948:-694 | Msa1464190:CDS |
| CTTCATGGGCCGTGTTAAAG+TGG | 0.489206 | tig0043948:-680 | Msa1464190:CDS |
| AGAGCGAGTGTTTGCTCCAT+CGG | 0.493206 | tig0043948:-1839 | Msa1464190:CDS |
| TCCAATTAAACCTCTTCCAA+AGG | 0.493211 | tig0043948:-1787 | Msa1464190:CDS |
| GTCCAACTTCGTCATATCCT+TGG | 0.498998 | tig0043948:-1075 | Msa1464190:CDS |
| GCATAGTTCAAGAACCCAAC+GGG | 0.501380 | tig0043948:-1893 | Msa1464190:CDS |
| AGTTGTTATTAGCTGCCAAA+AGG | 0.503930 | tig0043948:-1106 | Msa1464190:CDS |
| TAGCTGCCAAAAGGATAAGA+AGG | 0.510373 | tig0043948:-1097 | Msa1464190:CDS |
| TCAAGCAGATGGCAAAGGCT+TGG | 0.510477 | tig0043948:+509 | Msa1464190:intergenic |
| CCAATTAAACCTCTTCCAAA+GGG | 0.520678 | tig0043948:-1786 | Msa1464190:CDS |
| GCAGATGGCAAAGGCTTGGA+AGG | 0.525320 | tig0043948:+513 | Msa1464190:intergenic |
| AAGGCTTGGAAGGCAGAGAA+TGG | 0.529766 | tig0043948:+523 | Msa1464190:intergenic |
| CGAGCAAGCAACAAATATGT+TGG | 0.532337 | tig0043948:-1035 | Msa1464190:CDS |
| TTGCAATTAGGAAGCGCGGA+TGG | 0.532396 | tig0043948:-577 | Msa1464190:CDS |
| TTTAACACGGCCCATGAAGT+CGG | 0.535987 | tig0043948:+684 | Msa1464190:intergenic |
| TGCAATTAGGAAGCGCGGAT+GGG | 0.540465 | tig0043948:-576 | Msa1464190:CDS |
| GATAGTGTCGCATCTTGCTA+TGG | 0.548725 | tig0043948:-1817 | Msa1464190:CDS |
| CTCCTTATAAAGCAATGTAT+CGG | 0.559402 | tig0043948:+1454 | Msa1464190:intergenic |
| TCTTCTTCACCAGCACTGAA+GGG | 0.574228 | tig0043948:-838 | Msa1464190:CDS |
| CGATACATTGCTTTATAAGG+AGG | 0.577718 | tig0043948:-1453 | Msa1464190:CDS |
| TATGCAACAAATCAAGCAGA+TGG | 0.578623 | tig0043948:+498 | Msa1464190:intergenic |
| AGAAAAGTCATCTGCAGCCA+AGG | 0.580753 | tig0043948:+1058 | Msa1464190:intergenic |
| AGCCAAGGATATGACGAAGT+TGG | 0.583398 | tig0043948:+1073 | Msa1464190:intergenic |
| ATCGATCAACAACAGCTACA+AGG | 0.593016 | tig0043948:+638 | Msa1464190:intergenic |
| GAAAGAGTTTCATCAAACAC+TGG | 0.593740 | tig0043948:+859 | Msa1464190:intergenic |
| ATCGGATAATCATGAGGACC+AGG | 0.594387 | tig0043948:+1472 | Msa1464190:intergenic |
| ACAAATATGTTGGTAAACTG+AGG | 0.614123 | tig0043948:-1025 | Msa1464190:intron |
| ACAAATCAAGCAGATGGCAA+AGG | 0.618453 | tig0043948:+504 | Msa1464190:intergenic |
| AGATGGGATGAGCAGCGCAA+TGG | 0.619988 | tig0043948:-715 | Msa1464190:CDS |
| AGTGTCGTATATAGTGAACT+TGG | 0.625989 | tig0043948:+888 | Msa1464190:intergenic |
| AGAGTTTCATCAAACACTGG+AGG | 0.644449 | tig0043948:+862 | Msa1464190:intergenic |
| AGCATAGTTCAAGAACCCAA+CGG | 0.644993 | tig0043948:-1894 | Msa1464190:CDS |
| TCATAGATTCCACTTTAACA+CGG | 0.648935 | tig0043948:+671 | Msa1464190:intergenic |
| CAAGATGCGACACTATCCGA+TGG | 0.648960 | tig0043948:+1823 | Msa1464190:intergenic |
| GGGATGAGCAGCGCAATGGT+TGG | 0.651798 | tig0043948:-711 | Msa1464190:CDS |
| AATCTTGCAATTAGGAAGCG+CGG | 0.662669 | tig0043948:-581 | Msa1464190:CDS |
| CAATGTATCGGATAATCATG+AGG | 0.672393 | tig0043948:+1466 | Msa1464190:intergenic |
| TAACACGGCCCATGAAGTCG+GGG | 0.673932 | tig0043948:+686 | Msa1464190:intergenic |
| AAGCTACCAGAATTGAGCAG+AGG | 0.699056 | tig0043948:-775 | Msa1464190:CDS |
| ATGTCCAAAAGCAATTCACG+TGG | 0.740624 | tig0043948:+1747 | Msa1464180:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GGATAAGAATAATTTGAATT+AGG | + | tig0043948:868-887 | Msa1464190:intergenic | 20.0% |
| !! | GGATAAGAATAATTTGAATT+AGG | + | tig0043948:868-887 | Msa1464190:intergenic | 20.0% |
| ! | TAAAAATGGAATATCAAAGC+AGG | - | tig0043948:533-552 | Msa1464190:CDS | 25.0% |
| ! | AAAAATGGAATATCAAAGCA+GGG | - | tig0043948:534-553 | Msa1464190:CDS | 25.0% |
| ! | AAGAGAACATAAAAAACTCA+GGG | + | tig0043948:889-908 | Msa1464190:intergenic | 25.0% |
| ! | AAAGAGAACATAAAAAACTC+AGG | + | tig0043948:890-909 | Msa1464190:intergenic | 25.0% |
| ! | TTCTACATTTCTGTTGTATT+TGG | - | tig0043948:982-1001 | Msa1464190:intron | 25.0% |
| !! | CAACTTGATTTTTATACGTA+TGG | - | tig0043948:1470-1489 | Msa1464190:CDS | 25.0% |
| ! | GACCTTTATACTAAAAAACA+AGG | - | tig0043948:1658-1677 | Msa1464190:intron | 25.0% |
| !!! | AGCCTTGTTTTTTAGTATAA+AGG | + | tig0043948:1663-1682 | Msa1464190:intergenic | 25.0% |
| ! | TAAAAATGGAATATCAAAGC+AGG | - | tig0043948:533-552 | Msa1464190:CDS | 25.0% |
| ! | AAAAATGGAATATCAAAGCA+GGG | - | tig0043948:534-553 | Msa1464190:CDS | 25.0% |
| ! | AAGAGAACATAAAAAACTCA+GGG | + | tig0043948:889-908 | Msa1464190:intergenic | 25.0% |
| ! | AAAGAGAACATAAAAAACTC+AGG | + | tig0043948:890-909 | Msa1464190:intergenic | 25.0% |
| ! | TTCTACATTTCTGTTGTATT+TGG | - | tig0043948:982-1001 | Msa1464190:intron | 25.0% |
| !! | CAACTTGATTTTTATACGTA+TGG | - | tig0043948:1470-1489 | Msa1464190:CDS | 25.0% |
| ! | GACCTTTATACTAAAAAACA+AGG | - | tig0043948:1658-1677 | Msa1464190:intron | 25.0% |
| !!! | AGCCTTGTTTTTTAGTATAA+AGG | + | tig0043948:1663-1682 | Msa1464190:intergenic | 25.0% |
| !! | ATTCCATTTTTAATCCCGTT+GGG | + | tig0043948:525-544 | Msa1464190:intergenic | 30.0% |
| !! | TATTCCATTTTTAATCCCGT+TGG | + | tig0043948:526-545 | Msa1464190:intergenic | 30.0% |
| ATTTCCTATTTCATTGATGC+AGG | - | tig0043948:812-831 | Msa1464190:CDS | 30.0% | |
| ATCCGATACATTGCTTTATA+AGG | - | tig0043948:945-964 | Msa1464190:intron | 30.0% | |
| CTCCTTATAAAGCAATGTAT+CGG | + | tig0043948:950-969 | Msa1464190:intergenic | 30.0% | |
| !!! | TTCCTTACCTTTTTCAAAGA+CGG | - | tig0043948:1035-1054 | Msa1464190:CDS | 30.0% |
| ! | ATATTCACCGTCTTTGAAAA+AGG | + | tig0043948:1045-1064 | Msa1464190:intergenic | 30.0% |
| ACTTACTTGCTCTACATTTA+TGG | - | tig0043948:1135-1154 | Msa1464190:intron | 30.0% | |
| ATTTATTGTCATTCCGATTG+TGG | - | tig0043948:1168-1187 | Msa1464190:intron | 30.0% | |
| CAATGACAATAAACCACAAT+CGG | + | tig0043948:1184-1203 | Msa1464190:intergenic | 30.0% | |
| AACAAGTTGCTTAAATACGT+AGG | + | tig0043948:1234-1253 | Msa1464190:intergenic | 30.0% | |
| !! | CGTATTTAAGCAACTTGTTT+TGG | - | tig0043948:1235-1254 | Msa1464190:intron | 30.0% |
| !!! | TTAAGCAACTTGTTTTGGTT+TGG | - | tig0043948:1240-1259 | Msa1464190:intron | 30.0% |
| GTTTGGTTGTAATTGTATAG+CGG | - | tig0043948:1257-1276 | Msa1464190:intron | 30.0% | |
| ! | ACAAATATGTTGGTAAACTG+AGG | - | tig0043948:1376-1395 | Msa1464190:intron | 30.0% |
| GATGAAATGTCGATATAGAA+GGG | + | tig0043948:1431-1450 | Msa1464190:intergenic | 30.0% | |
| ! | ATCAAGTTGTGAAGACTATA+AGG | + | tig0043948:1459-1478 | Msa1464190:intergenic | 30.0% |
| ! | TTGATTTTTATACGTATGGC+AGG | - | tig0043948:1474-1493 | Msa1464190:CDS | 30.0% |
| TAAAAAACAAGGCTCTTAGA+TGG | - | tig0043948:1669-1688 | Msa1464190:intron | 30.0% | |
| AAAAAACAAGGCTCTTAGAT+GGG | - | tig0043948:1670-1689 | Msa1464190:intron | 30.0% | |
| TCATAGATTCCACTTTAACA+CGG | + | tig0043948:1733-1752 | Msa1464190:intergenic | 30.0% | |
| !! | ATTCCATTTTTAATCCCGTT+GGG | + | tig0043948:525-544 | Msa1464190:intergenic | 30.0% |
| !! | TATTCCATTTTTAATCCCGT+TGG | + | tig0043948:526-545 | Msa1464190:intergenic | 30.0% |
| ATTTCCTATTTCATTGATGC+AGG | - | tig0043948:812-831 | Msa1464190:CDS | 30.0% | |
| ATCCGATACATTGCTTTATA+AGG | - | tig0043948:945-964 | Msa1464190:intron | 30.0% | |
| CTCCTTATAAAGCAATGTAT+CGG | + | tig0043948:950-969 | Msa1464190:intergenic | 30.0% | |
| !!! | TTCCTTACCTTTTTCAAAGA+CGG | - | tig0043948:1035-1054 | Msa1464190:CDS | 30.0% |
| ! | ATATTCACCGTCTTTGAAAA+AGG | + | tig0043948:1045-1064 | Msa1464190:intergenic | 30.0% |
| ACTTACTTGCTCTACATTTA+TGG | - | tig0043948:1135-1154 | Msa1464190:intron | 30.0% | |
| ATTTATTGTCATTCCGATTG+TGG | - | tig0043948:1168-1187 | Msa1464190:intron | 30.0% | |
| CAATGACAATAAACCACAAT+CGG | + | tig0043948:1184-1203 | Msa1464190:intergenic | 30.0% | |
| AACAAGTTGCTTAAATACGT+AGG | + | tig0043948:1234-1253 | Msa1464190:intergenic | 30.0% | |
| !! | CGTATTTAAGCAACTTGTTT+TGG | - | tig0043948:1235-1254 | Msa1464190:intron | 30.0% |
| !!! | TTAAGCAACTTGTTTTGGTT+TGG | - | tig0043948:1240-1259 | Msa1464190:intron | 30.0% |
| GTTTGGTTGTAATTGTATAG+CGG | - | tig0043948:1257-1276 | Msa1464190:intron | 30.0% | |
| ! | ACAAATATGTTGGTAAACTG+AGG | - | tig0043948:1376-1395 | Msa1464190:intron | 30.0% |
| GATGAAATGTCGATATAGAA+GGG | + | tig0043948:1431-1450 | Msa1464190:intergenic | 30.0% | |
| ! | ATCAAGTTGTGAAGACTATA+AGG | + | tig0043948:1459-1478 | Msa1464190:intergenic | 30.0% |
| ! | TTGATTTTTATACGTATGGC+AGG | - | tig0043948:1474-1493 | Msa1464190:CDS | 30.0% |
| TAAAAAACAAGGCTCTTAGA+TGG | - | tig0043948:1669-1688 | Msa1464190:intron | 30.0% | |
| AAAAAACAAGGCTCTTAGAT+GGG | - | tig0043948:1670-1689 | Msa1464190:intron | 30.0% | |
| TCATAGATTCCACTTTAACA+CGG | + | tig0043948:1733-1752 | Msa1464190:intergenic | 30.0% | |
| TCCAATTAAACCTCTTCCAA+AGG | - | tig0043948:614-633 | Msa1464190:CDS | 35.0% | |
| CCAATTAAACCTCTTCCAAA+GGG | - | tig0043948:615-634 | Msa1464190:CDS | 35.0% | |
| ! | GCTTTTGGACATAATCCATA+AGG | - | tig0043948:665-684 | Msa1464190:CDS | 35.0% |
| ! | TTTGACGATCTCTTTTGTGA+CGG | + | tig0043948:766-785 | Msa1464190:intergenic | 35.0% |
| ATTGCCTGCATCAATGAAAT+AGG | + | tig0043948:819-838 | Msa1464190:intergenic | 35.0% | |
| TTAATTCTTCACCCACTTTC+TGG | - | tig0043948:842-861 | Msa1464190:CDS | 35.0% | |
| TTTGAATTAGGCCAGAAAGT+GGG | + | tig0043948:856-875 | Msa1464190:intergenic | 35.0% | |
| ATTTGAATTAGGCCAGAAAG+TGG | + | tig0043948:857-876 | Msa1464190:intergenic | 35.0% | |
| CAATGTATCGGATAATCATG+AGG | + | tig0043948:938-957 | Msa1464190:intergenic | 35.0% | |
| CGATACATTGCTTTATAAGG+AGG | - | tig0043948:948-967 | Msa1464190:intron | 35.0% | |
| ! | AGTTGTTATTAGCTGCCAAA+AGG | - | tig0043948:1295-1314 | Msa1464190:intron | 35.0% |
| GGATGAAATGTCGATATAGA+AGG | + | tig0043948:1432-1451 | Msa1464190:intergenic | 35.0% | |
| TCTATATCGACATTTCATCC+TGG | - | tig0043948:1432-1451 | Msa1464190:CDS | 35.0% | |
| AGTGTCGTATATAGTGAACT+TGG | + | tig0043948:1516-1535 | Msa1464190:intergenic | 35.0% | |
| GAAAGAGTTTCATCAAACAC+TGG | + | tig0043948:1545-1564 | Msa1464190:intergenic | 35.0% | |
| ATGAGAGATTCATACTTTGC+AGG | - | tig0043948:1596-1615 | Msa1464190:intron | 35.0% | |
| !! | TCAATTCTGGTAGCTTTGAT+AGG | + | tig0043948:1622-1641 | Msa1464190:intergenic | 35.0% |
| AAATGGCCAATCTTGCAATT+AGG | - | tig0043948:1812-1831 | Msa1464190:CDS | 35.0% | |
| TATGCAACAAATCAAGCAGA+TGG | + | tig0043948:1906-1925 | Msa1464190:intergenic | 35.0% | |
| TCCAATTAAACCTCTTCCAA+AGG | - | tig0043948:614-633 | Msa1464190:CDS | 35.0% | |
| CCAATTAAACCTCTTCCAAA+GGG | - | tig0043948:615-634 | Msa1464190:CDS | 35.0% | |
| ! | GCTTTTGGACATAATCCATA+AGG | - | tig0043948:665-684 | Msa1464190:CDS | 35.0% |
| ! | TTTGACGATCTCTTTTGTGA+CGG | + | tig0043948:766-785 | Msa1464190:intergenic | 35.0% |
| ATTGCCTGCATCAATGAAAT+AGG | + | tig0043948:819-838 | Msa1464190:intergenic | 35.0% | |
| TTAATTCTTCACCCACTTTC+TGG | - | tig0043948:842-861 | Msa1464190:CDS | 35.0% | |
| TTTGAATTAGGCCAGAAAGT+GGG | + | tig0043948:856-875 | Msa1464190:intergenic | 35.0% | |
| ATTTGAATTAGGCCAGAAAG+TGG | + | tig0043948:857-876 | Msa1464190:intergenic | 35.0% | |
| CAATGTATCGGATAATCATG+AGG | + | tig0043948:938-957 | Msa1464190:intergenic | 35.0% | |
| CGATACATTGCTTTATAAGG+AGG | - | tig0043948:948-967 | Msa1464190:intron | 35.0% | |
| ! | AGTTGTTATTAGCTGCCAAA+AGG | - | tig0043948:1295-1314 | Msa1464190:intron | 35.0% |
| GGATGAAATGTCGATATAGA+AGG | + | tig0043948:1432-1451 | Msa1464190:intergenic | 35.0% | |
| TCTATATCGACATTTCATCC+TGG | - | tig0043948:1432-1451 | Msa1464190:CDS | 35.0% | |
| AGTGTCGTATATAGTGAACT+TGG | + | tig0043948:1516-1535 | Msa1464190:intergenic | 35.0% | |
| GAAAGAGTTTCATCAAACAC+TGG | + | tig0043948:1545-1564 | Msa1464190:intergenic | 35.0% | |
| ATGAGAGATTCATACTTTGC+AGG | - | tig0043948:1596-1615 | Msa1464190:intron | 35.0% | |
| !! | TCAATTCTGGTAGCTTTGAT+AGG | + | tig0043948:1622-1641 | Msa1464190:intergenic | 35.0% |
| AAATGGCCAATCTTGCAATT+AGG | - | tig0043948:1812-1831 | Msa1464190:CDS | 35.0% | |
| TATGCAACAAATCAAGCAGA+TGG | + | tig0043948:1906-1925 | Msa1464190:intergenic | 35.0% | |
| AGCATAGTTCAAGAACCCAA+CGG | - | tig0043948:507-526 | Msa1464190:CDS | 40.0% | |
| GAACCCAACGGGATTAAAAA+TGG | - | tig0043948:519-538 | Msa1464190:CDS | 40.0% | |
| ! | CCCTTTGGAAGAGGTTTAAT+TGG | + | tig0043948:618-637 | Msa1464190:intergenic | 40.0% |
| ! | TCTACCACGTGAATTGCTTT+TGG | - | tig0043948:650-669 | Msa1464190:CDS | 40.0% |
| ATGTCCAAAAGCAATTCACG+TGG | + | tig0043948:657-676 | Msa1464190:intergenic | 40.0% | |
| TCTCACTCTCTTCAACCTTA+TGG | + | tig0043948:683-702 | Msa1464190:intergenic | 40.0% | |
| TTGAAGAGAGTGAGACATCT+TGG | - | tig0043948:688-707 | Msa1464190:CDS | 40.0% | |
| ! | TGTTGTTGTCGTTTGTGCTT+CGG | - | tig0043948:722-741 | Msa1464190:CDS | 40.0% |
| GTGCTTCGGTATGTAAATCA+TGG | - | tig0043948:736-755 | Msa1464190:CDS | 40.0% | |
| CTTCGGTATGTAAATCATGG+AGG | - | tig0043948:739-758 | Msa1464190:CDS | 40.0% | |
| GTCAAAACTCTTCAGCAATG+TGG | - | tig0043948:780-799 | Msa1464190:CDS | 40.0% | |
| ! | CACCGTCTTTGAAAAAGGTA+AGG | + | tig0043948:1040-1059 | Msa1464190:intergenic | 40.0% |
| TAGCTGCCAAAAGGATAAGA+AGG | - | tig0043948:1304-1323 | Msa1464190:intron | 40.0% | |
| ! | GTTGGACCTTCTTATCCTTT+TGG | + | tig0043948:1313-1332 | Msa1464190:intergenic | 40.0% |
| CGAGCAAGCAACAAATATGT+TGG | - | tig0043948:1366-1385 | Msa1464190:intron | 40.0% | |
| ! | TGGTAAACTGAGGCAAGTTT+TGG | - | tig0043948:1386-1405 | Msa1464190:intron | 40.0% |
| TTGTGAAGACTATAAGGACC+AGG | + | tig0043948:1453-1472 | Msa1464190:intergenic | 40.0% | |
| ! | CGTATGGCAGGTCAAATTTT+TGG | - | tig0043948:1486-1505 | Msa1464190:intron | 40.0% |
| AGAGTTTCATCAAACACTGG+AGG | + | tig0043948:1542-1561 | Msa1464190:intergenic | 40.0% | |
| ATCGATCAACAACAGCTACA+AGG | + | tig0043948:1766-1785 | Msa1464190:intergenic | 40.0% | |
| CGATCTCATAATGTTTCTCC+TGG | - | tig0043948:1782-1801 | Msa1464190:CDS | 40.0% | |
| AATCTTGCAATTAGGAAGCG+CGG | - | tig0043948:1820-1839 | Msa1464190:CDS | 40.0% | |
| ACAAATCAAGCAGATGGCAA+AGG | + | tig0043948:1900-1919 | Msa1464190:intergenic | 40.0% | |
| AGCATAGTTCAAGAACCCAA+CGG | - | tig0043948:507-526 | Msa1464190:CDS | 40.0% | |
| GAACCCAACGGGATTAAAAA+TGG | - | tig0043948:519-538 | Msa1464190:CDS | 40.0% | |
| ! | CCCTTTGGAAGAGGTTTAAT+TGG | + | tig0043948:618-637 | Msa1464190:intergenic | 40.0% |
| ! | TCTACCACGTGAATTGCTTT+TGG | - | tig0043948:650-669 | Msa1464190:CDS | 40.0% |
| ATGTCCAAAAGCAATTCACG+TGG | + | tig0043948:657-676 | Msa1464190:intergenic | 40.0% | |
| TCTCACTCTCTTCAACCTTA+TGG | + | tig0043948:683-702 | Msa1464190:intergenic | 40.0% | |
| TTGAAGAGAGTGAGACATCT+TGG | - | tig0043948:688-707 | Msa1464190:CDS | 40.0% | |
| ! | TGTTGTTGTCGTTTGTGCTT+CGG | - | tig0043948:722-741 | Msa1464190:CDS | 40.0% |
| GTGCTTCGGTATGTAAATCA+TGG | - | tig0043948:736-755 | Msa1464190:CDS | 40.0% | |
| CTTCGGTATGTAAATCATGG+AGG | - | tig0043948:739-758 | Msa1464190:CDS | 40.0% | |
| GTCAAAACTCTTCAGCAATG+TGG | - | tig0043948:780-799 | Msa1464190:CDS | 40.0% | |
| ! | CACCGTCTTTGAAAAAGGTA+AGG | + | tig0043948:1040-1059 | Msa1464190:intergenic | 40.0% |
| TAGCTGCCAAAAGGATAAGA+AGG | - | tig0043948:1304-1323 | Msa1464190:intron | 40.0% | |
| ! | GTTGGACCTTCTTATCCTTT+TGG | + | tig0043948:1313-1332 | Msa1464190:intergenic | 40.0% |
| CGAGCAAGCAACAAATATGT+TGG | - | tig0043948:1366-1385 | Msa1464190:intron | 40.0% | |
| ! | TGGTAAACTGAGGCAAGTTT+TGG | - | tig0043948:1386-1405 | Msa1464190:intron | 40.0% |
| TTGTGAAGACTATAAGGACC+AGG | + | tig0043948:1453-1472 | Msa1464190:intergenic | 40.0% | |
| ! | CGTATGGCAGGTCAAATTTT+TGG | - | tig0043948:1486-1505 | Msa1464190:intron | 40.0% |
| AGAGTTTCATCAAACACTGG+AGG | + | tig0043948:1542-1561 | Msa1464190:intergenic | 40.0% | |
| ATCGATCAACAACAGCTACA+AGG | + | tig0043948:1766-1785 | Msa1464190:intergenic | 40.0% | |
| CGATCTCATAATGTTTCTCC+TGG | - | tig0043948:1782-1801 | Msa1464190:CDS | 40.0% | |
| AATCTTGCAATTAGGAAGCG+CGG | - | tig0043948:1820-1839 | Msa1464190:CDS | 40.0% | |
| ACAAATCAAGCAGATGGCAA+AGG | + | tig0043948:1900-1919 | Msa1464190:intergenic | 40.0% | |
| GCATAGTTCAAGAACCCAAC+GGG | - | tig0043948:508-527 | Msa1464190:CDS | 45.0% | |
| GATAGTGTCGCATCTTGCTA+TGG | - | tig0043948:584-603 | Msa1464190:CDS | 45.0% | |
| AACCTCTTCCAAAGGGAGAA+TGG | - | tig0043948:622-641 | Msa1464190:CDS | 45.0% | |
| ACCTCTTCCAAAGGGAGAAT+GGG | - | tig0043948:623-642 | Msa1464190:CDS | 45.0% | |
| AGACTTTCCCATTCTCCCTT+TGG | + | tig0043948:633-652 | Msa1464190:intergenic | 45.0% | |
| CAGGCTAAGCATGCACATAA+AGG | + | tig0043948:913-932 | Msa1464190:intergenic | 45.0% | |
| CTTTATGTGCATGCTTAGCC+TGG | - | tig0043948:911-930 | Msa1464190:intron | 45.0% | |
| ATCGGATAATCATGAGGACC+AGG | + | tig0043948:932-951 | Msa1464190:intergenic | 45.0% | |
| GTCCAACTTCGTCATATCCT+TGG | - | tig0043948:1326-1345 | Msa1464190:intron | 45.0% | |
| AGCCAAGGATATGACGAAGT+TGG | + | tig0043948:1331-1350 | Msa1464190:intergenic | 45.0% | |
| AGAAAAGTCATCTGCAGCCA+AGG | + | tig0043948:1346-1365 | Msa1464190:intergenic | 45.0% | |
| ! | TTCTTCTTCACCAGCACTGA+AGG | - | tig0043948:1562-1581 | Msa1464190:intron | 45.0% |
| ! | TCTTCTTCACCAGCACTGAA+GGG | - | tig0043948:1563-1582 | Msa1464190:intron | 45.0% |
| AAGCTACCAGAATTGAGCAG+AGG | - | tig0043948:1626-1645 | Msa1464190:intron | 45.0% | |
| AATGAGCCTCTGCTCAATTC+TGG | + | tig0043948:1635-1654 | Msa1464190:intergenic | 45.0% | |
| TTTAACACGGCCCATGAAGT+CGG | + | tig0043948:1720-1739 | Msa1464190:intergenic | 45.0% | |
| TTTCTCCTGGAGTGCGAAAA+TGG | - | tig0043948:1795-1814 | Msa1464190:CDS | 45.0% | |
| GCGCTTCCTAATTGCAAGAT+TGG | + | tig0043948:1821-1840 | Msa1464190:intergenic | 45.0% | |
| GCATAGTTCAAGAACCCAAC+GGG | - | tig0043948:508-527 | Msa1464190:CDS | 45.0% | |
| GATAGTGTCGCATCTTGCTA+TGG | - | tig0043948:584-603 | Msa1464190:CDS | 45.0% | |
| AACCTCTTCCAAAGGGAGAA+TGG | - | tig0043948:622-641 | Msa1464190:CDS | 45.0% | |
| ACCTCTTCCAAAGGGAGAAT+GGG | - | tig0043948:623-642 | Msa1464190:CDS | 45.0% | |
| AGACTTTCCCATTCTCCCTT+TGG | + | tig0043948:633-652 | Msa1464190:intergenic | 45.0% | |
| CAGGCTAAGCATGCACATAA+AGG | + | tig0043948:913-932 | Msa1464190:intergenic | 45.0% | |
| CTTTATGTGCATGCTTAGCC+TGG | - | tig0043948:911-930 | Msa1464190:intron | 45.0% | |
| ATCGGATAATCATGAGGACC+AGG | + | tig0043948:932-951 | Msa1464190:intergenic | 45.0% | |
| GTCCAACTTCGTCATATCCT+TGG | - | tig0043948:1326-1345 | Msa1464190:intron | 45.0% | |
| AGCCAAGGATATGACGAAGT+TGG | + | tig0043948:1331-1350 | Msa1464190:intergenic | 45.0% | |
| AGAAAAGTCATCTGCAGCCA+AGG | + | tig0043948:1346-1365 | Msa1464190:intergenic | 45.0% | |
| ! | TTCTTCTTCACCAGCACTGA+AGG | - | tig0043948:1562-1581 | Msa1464190:intron | 45.0% |
| ! | TCTTCTTCACCAGCACTGAA+GGG | - | tig0043948:1563-1582 | Msa1464190:intron | 45.0% |
| AAGCTACCAGAATTGAGCAG+AGG | - | tig0043948:1626-1645 | Msa1464190:intron | 45.0% | |
| AATGAGCCTCTGCTCAATTC+TGG | + | tig0043948:1635-1654 | Msa1464190:intergenic | 45.0% | |
| TTTAACACGGCCCATGAAGT+CGG | + | tig0043948:1720-1739 | Msa1464190:intergenic | 45.0% | |
| TTTCTCCTGGAGTGCGAAAA+TGG | - | tig0043948:1795-1814 | Msa1464190:CDS | 45.0% | |
| GCGCTTCCTAATTGCAAGAT+TGG | + | tig0043948:1821-1840 | Msa1464190:intergenic | 45.0% | |
| AGAGCGAGTGTTTGCTCCAT+CGG | - | tig0043948:562-581 | Msa1464190:CDS | 50.0% | |
| CAAGATGCGACACTATCCGA+TGG | + | tig0043948:581-600 | Msa1464190:intergenic | 50.0% | |
| ! | TCCCATTCTCCCTTTGGAAG+AGG | + | tig0043948:627-646 | Msa1464190:intergenic | 50.0% |
| TTAACACGGCCCATGAAGTC+GGG | + | tig0043948:1719-1738 | Msa1464190:intergenic | 50.0% | |
| CTTCATGGGCCGTGTTAAAG+TGG | - | tig0043948:1721-1740 | Msa1464190:CDS | 50.0% | |
| !! | ATTGGCCATTTTCGCACTCC+AGG | + | tig0043948:1803-1822 | Msa1464190:intergenic | 50.0% |
| ! | TTGCAATTAGGAAGCGCGGA+TGG | - | tig0043948:1824-1843 | Msa1464190:CDS | 50.0% |
| ! | TGCAATTAGGAAGCGCGGAT+GGG | - | tig0043948:1825-1844 | Msa1464190:CDS | 50.0% |
| AAGGCTTGGAAGGCAGAGAA+TGG | + | tig0043948:1881-1900 | Msa1464190:intergenic | 50.0% | |
| TCAAGCAGATGGCAAAGGCT+TGG | + | tig0043948:1895-1914 | Msa1464190:intergenic | 50.0% | |
| AGAGCGAGTGTTTGCTCCAT+CGG | - | tig0043948:562-581 | Msa1464190:CDS | 50.0% | |
| CAAGATGCGACACTATCCGA+TGG | + | tig0043948:581-600 | Msa1464190:intergenic | 50.0% | |
| ! | TCCCATTCTCCCTTTGGAAG+AGG | + | tig0043948:627-646 | Msa1464190:intergenic | 50.0% |
| TTAACACGGCCCATGAAGTC+GGG | + | tig0043948:1719-1738 | Msa1464190:intergenic | 50.0% | |
| CTTCATGGGCCGTGTTAAAG+TGG | - | tig0043948:1721-1740 | Msa1464190:CDS | 50.0% | |
| !! | ATTGGCCATTTTCGCACTCC+AGG | + | tig0043948:1803-1822 | Msa1464190:intergenic | 50.0% |
| ! | TTGCAATTAGGAAGCGCGGA+TGG | - | tig0043948:1824-1843 | Msa1464190:CDS | 50.0% |
| ! | TGCAATTAGGAAGCGCGGAT+GGG | - | tig0043948:1825-1844 | Msa1464190:CDS | 50.0% |
| AAGGCTTGGAAGGCAGAGAA+TGG | + | tig0043948:1881-1900 | Msa1464190:intergenic | 50.0% | |
| TCAAGCAGATGGCAAAGGCT+TGG | + | tig0043948:1895-1914 | Msa1464190:intergenic | 50.0% | |
| TGGAGCAAACACTCGCTCTC+AGG | + | tig0043948:561-580 | Msa1464190:intergenic | 55.0% | |
| ! | CGACGTTTTCCCTTCAGTGC+TGG | + | tig0043948:1575-1594 | Msa1464190:intergenic | 55.0% |
| AGATGGGATGAGCAGCGCAA+TGG | - | tig0043948:1686-1705 | Msa1464190:CDS | 55.0% | |
| TAACACGGCCCATGAAGTCG+GGG | + | tig0043948:1718-1737 | Msa1464190:intergenic | 55.0% | |
| GCAGATGGCAAAGGCTTGGA+AGG | + | tig0043948:1891-1910 | Msa1464190:intergenic | 55.0% | |
| TGGAGCAAACACTCGCTCTC+AGG | + | tig0043948:561-580 | Msa1464190:intergenic | 55.0% | |
| ! | CGACGTTTTCCCTTCAGTGC+TGG | + | tig0043948:1575-1594 | Msa1464190:intergenic | 55.0% |
| AGATGGGATGAGCAGCGCAA+TGG | - | tig0043948:1686-1705 | Msa1464190:CDS | 55.0% | |
| TAACACGGCCCATGAAGTCG+GGG | + | tig0043948:1718-1737 | Msa1464190:intergenic | 55.0% | |
| GCAGATGGCAAAGGCTTGGA+AGG | + | tig0043948:1891-1910 | Msa1464190:intergenic | 55.0% | |
| ACGACAACAACAGCACGCGC+AGG | + | tig0043948:714-733 | Msa1464190:intergenic | 60.0% | |
| GGGATGAGCAGCGCAATGGT+TGG | - | tig0043948:1690-1709 | Msa1464190:CDS | 60.0% | |
| ! | TGGTTGGTGCCCCGACTTCA+TGG | - | tig0043948:1706-1725 | Msa1464190:CDS | 60.0% |
| ! | GGTTGGTGCCCCGACTTCAT+GGG | - | tig0043948:1707-1726 | Msa1464190:CDS | 60.0% |
| ACGACAACAACAGCACGCGC+AGG | + | tig0043948:714-733 | Msa1464190:intergenic | 60.0% | |
| GGGATGAGCAGCGCAATGGT+TGG | - | tig0043948:1690-1709 | Msa1464190:CDS | 60.0% | |
| ! | TGGTTGGTGCCCCGACTTCA+TGG | - | tig0043948:1706-1725 | Msa1464190:CDS | 60.0% |
| ! | GGTTGGTGCCCCGACTTCAT+GGG | - | tig0043948:1707-1726 | Msa1464190:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0043948 | gene | 495 | 1928 | 495 | ID=Msa1464190;Name=Msa1464190 |
| tig0043948 | mRNA | 495 | 1928 | 495 | ID=Msa1464190-mRNA-1;Parent=Msa1464190;Name=Msa1464190-mRNA-1;_AED=0.35;_eAED=0.35;_QI=0|0|0|1|1|1|4|0|294 |
| tig0043948 | exon | 1680 | 1928 | 1680 | ID=Msa1464190-mRNA-1:exon:24345;Parent=Msa1464190-mRNA-1 |
| tig0043948 | exon | 1413 | 1494 | 1413 | ID=Msa1464190-mRNA-1:exon:24344;Parent=Msa1464190-mRNA-1 |
| tig0043948 | exon | 1026 | 1146 | 1026 | ID=Msa1464190-mRNA-1:exon:24343;Parent=Msa1464190-mRNA-1 |
| tig0043948 | exon | 495 | 927 | 495 | ID=Msa1464190-mRNA-1:exon:24342;Parent=Msa1464190-mRNA-1 |
| tig0043948 | CDS | 1680 | 1928 | 1680 | ID=Msa1464190-mRNA-1:cds;Parent=Msa1464190-mRNA-1 |
| tig0043948 | CDS | 1413 | 1494 | 1413 | ID=Msa1464190-mRNA-1:cds;Parent=Msa1464190-mRNA-1 |
| tig0043948 | CDS | 1026 | 1146 | 1026 | ID=Msa1464190-mRNA-1:cds;Parent=Msa1464190-mRNA-1 |
| tig0043948 | CDS | 495 | 927 | 495 | ID=Msa1464190-mRNA-1:cds;Parent=Msa1464190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
