AlfalfaGEDB | Msa1466910

M. sativa cultivar zhongmu-4 / Msa1466910

KEGG: -
GO: GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
PFAM: PF07714.20

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1466910	PNY09419.1	100.000	75	0	0	1	75	119	193	7.48e-47	159

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1466910	sp\|Q05609\|CTR1_ARATH	66.667	75	25	0	1	75	715	789	1.15e-28	109

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1466910	A0A2K3P2D1	100.000	75	0	0	1	75	119	193	3.57e-47	159

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1466910	MtrunA17_Chr5g0427651	100.000	75	0	0	1	75	810	884	2.57e-48	162
Msa1466910	MtrunA17_Chr3g0132791	82.667	75	13	0	1	75	817	891	2.36e-39	137
Msa1466910	MtrunA17_Chr6g0482711	65.753	73	25	0	2	74	823	895	2.58e-31	114
Msa1466910	MtrunA17_Chr1g0179331	64.000	75	27	0	1	75	719	793	1.52e-30	112
Msa1466910	MtrunA17_Chr1g0191171	64.865	74	26	0	1	74	851	924	1.24e-28	106
Msa1466910	MtrunA17_Chr1g0171451	64.000	75	27	0	1	75	578	652	2.76e-28	105
Msa1466910	MtrunA17_Chr1g0151541	62.162	74	28	0	1	74	825	898	3.11e-28	105
Msa1466910	MtrunA17_Chr4g0068411	63.514	74	27	0	1	74	622	695	3.47e-28	105
Msa1466910	MtrunA17_Chr2g0294351	62.162	74	28	0	1	74	628	701	1.04e-27	103
Msa1466910	MtrunA17_Chr8g0392871	57.534	73	31	0	2	74	902	974	3.66e-26	99.4
Msa1466910	MtrunA17_Chr5g0397931	54.054	74	34	0	1	74	585	658	6.93e-26	98.6
Msa1466910	MtrunA17_Chr7g0244621	47.500	80	34	2	3	74	210	289	3.85e-20	81.6
Msa1466910	MtrunA17_Chr4g0075541	44.595	74	41	0	2	75	252	325	9.68e-19	78.2
Msa1466910	MtrunA17_Chr2g0325851	49.333	75	35	1	1	75	719	790	1.11e-18	78.2
Msa1466910	MtrunA17_Chr4g0059181	47.222	72	38	0	3	74	275	346	1.78e-18	77.4
Msa1466910	MtrunA17_Chr3g0117811	45.833	72	39	0	3	74	246	317	2.42e-18	76.6
Msa1466910	MtrunA17_Chr4g0047191	43.836	73	41	0	3	75	212	284	2.94e-18	76.6
Msa1466910	MtrunA17_Chr4g0047211	43.836	73	41	0	3	75	207	279	3.39e-18	76.3
Msa1466910	MtrunA17_Chr4g0047201	45.205	73	40	0	3	75	368	440	7.43e-18	75.9
Msa1466910	MtrunA17_Chr5g0394681	48.611	72	37	0	3	74	273	344	7.74e-18	75.5
Msa1466910	MtrunA17_Chr6g0450871	47.222	72	38	0	3	74	258	329	1.10e-17	75.1
Msa1466910	MtrunA17_Chr3g0090261	43.836	73	41	0	2	74	247	319	2.16e-17	74.3
Msa1466910	MtrunA17_Chr1g0202101	43.056	72	40	1	3	74	444	514	2.23e-17	74.3
Msa1466910	MtrunA17_Chr1g0205071	45.833	72	39	0	3	74	265	336	4.01e-17	73.6
Msa1466910	MtrunA17_Chr4g0041201	48.000	75	36	1	1	75	709	780	4.24e-17	73.6
Msa1466910	MtrunA17_Chr4g0059121	39.726	73	44	0	3	75	224	296	6.87e-17	72.8
Msa1466910	MtrunA17_Chr4g0065211	42.667	75	41	1	3	75	1294	1368	1.09e-16	72.4
Msa1466910	MtrunA17_Chr2g0310781	40.000	75	43	1	3	75	1018	1092	1.79e-16	72.0
Msa1466910	MtrunA17_Chr5g0406251	41.667	72	42	0	3	74	456	527	1.81e-16	72.0
Msa1466910	MtrunA17_Chr2g0282321	42.466	73	42	0	3	75	329	401	3.40e-16	70.9
Msa1466910	MtrunA17_Chr3g0117731	39.726	73	44	0	3	75	223	295	4.39e-16	70.5
Msa1466910	MtrunA17_Chr6g0461841	40.000	75	43	1	3	75	1140	1214	6.08e-16	70.5
Msa1466910	MtrunA17_Chr2g0305141	40.000	75	43	1	3	75	1256	1330	1.05e-15	69.7
Msa1466910	MtrunA17_Chr4g0072741	45.333	75	39	1	3	75	1008	1082	1.21e-15	69.7
Msa1466910	MtrunA17_Chr1g0196631	37.333	75	45	1	3	75	1073	1147	1.42e-15	69.3
Msa1466910	MtrunA17_Chr3g0143531	41.096	73	43	0	2	74	185	257	2.06e-15	68.2
Msa1466910	MtrunA17_Chr8g0357611	40.000	75	43	1	3	75	1543	1617	2.09e-15	68.9
Msa1466910	MtrunA17_Chr2g0310761	40.000	75	43	1	3	75	1112	1186	2.29e-15	68.6
Msa1466910	MtrunA17_Chr1g0211611	41.667	72	42	0	3	74	462	533	7.57e-15	67.4
Msa1466910	MtrunA17_Chr5g0431191	34.211	76	46	1	3	74	491	566	3.06e-13	62.8
Msa1466910	MtrunA17_Chr3g0105891	36.842	76	44	1	3	74	488	563	3.98e-13	62.4
Msa1466910	MtrunA17_Chr6g0449241	41.250	80	38	3	3	74	191	269	1.14e-12	60.8
Msa1466910	MtrunA17_Chr3g0116981	38.750	80	40	3	3	74	191	269	1.46e-11	57.8
Msa1466910	MtrunA17_Chr1g0165941	36.842	57	36	0	17	73	12	68	2.19e-11	53.9
Msa1466910	MtrunA17_Chr1g0157231	52.083	48	22	1	3	49	306	353	3.54e-11	56.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1466910	AT4G24480.1	89.333	75	8	0	1	75	838	912	3.02e-42	145
Msa1466910	AT4G24480.2	89.333	75	8	0	1	75	833	907	3.39e-42	145
Msa1466910	AT4G24480.3	89.333	75	8	0	1	75	833	907	3.48e-42	145
Msa1466910	AT5G03730.2	66.667	75	25	0	1	75	715	789	1.17e-29	109
Msa1466910	AT5G03730.1	66.667	75	25	0	1	75	715	789	1.17e-29	109
Msa1466910	AT1G08720.2	64.865	74	26	0	1	74	831	904	5.15e-29	107
Msa1466910	AT1G08720.1	64.865	74	26	0	1	74	831	904	5.91e-29	107
Msa1466910	AT5G11850.1	63.514	74	27	0	1	74	771	844	5.01e-28	105
Msa1466910	AT1G73660.1	64.384	73	26	0	2	74	911	983	7.71e-28	104
Msa1466910	AT5G49470.3	64.865	74	26	0	1	74	653	726	1.22e-27	103
Msa1466910	AT5G49470.1	64.865	74	26	0	1	74	366	439	1.29e-27	103
Msa1466910	AT5G49470.7	64.865	74	26	0	1	74	526	599	1.36e-27	103
Msa1466910	AT5G49470.2	64.865	74	26	0	1	74	714	787	1.47e-27	103
Msa1466910	AT5G49470.4	64.865	74	26	0	1	74	627	700	1.66e-27	103
Msa1466910	AT1G18160.2	63.014	73	27	0	2	74	878	950	3.18e-27	102
Msa1466910	AT1G18160.1	63.014	73	27	0	2	74	878	950	3.35e-27	102
Msa1466910	AT1G67890.4	60.811	74	29	0	1	74	520	593	2.64e-26	100
Msa1466910	AT1G67890.3	60.811	74	29	0	1	74	648	721	3.08e-26	100
Msa1466910	AT1G67890.2	60.811	74	29	0	1	74	648	721	3.08e-26	100
Msa1466910	AT1G67890.1	60.811	74	29	0	1	74	648	721	3.08e-26	100
Msa1466910	AT3G06640.2	58.108	74	31	0	1	74	608	681	9.69e-26	98.6
Msa1466910	AT3G06640.3	58.108	74	31	0	1	74	608	681	9.69e-26	98.6
Msa1466910	AT3G06640.1	58.108	74	31	0	1	74	608	681	9.70e-26	98.6
Msa1466910	AT3G06620.1	58.108	74	31	0	1	74	656	729	1.37e-25	98.2
Msa1466910	AT4G23050.1	56.757	74	32	0	1	74	629	702	1.56e-25	98.2
Msa1466910	AT4G23050.2	56.757	74	32	0	1	74	630	703	1.59e-25	98.2
Msa1466910	AT3G06630.2	58.108	74	31	0	1	74	596	669	3.33e-25	97.1
Msa1466910	AT3G06630.1	58.108	74	31	0	1	74	596	669	3.52e-25	97.1
Msa1466910	AT2G42640.1	49.333	75	35	1	1	75	687	758	3.34e-19	80.1
Msa1466910	AT2G42640.4	49.333	75	35	1	1	75	649	720	3.37e-19	80.1
Msa1466910	AT1G62400.1	46.575	73	39	0	3	75	252	324	4.47e-19	79.3
Msa1466910	AT5G50000.1	47.222	72	38	0	3	74	268	339	1.29e-18	78.2
Msa1466910	AT3G01490.1	48.611	72	37	0	3	74	294	365	1.66e-18	77.8
Msa1466910	AT3G58640.1	48.000	75	36	1	1	75	715	786	2.77e-18	77.4
Msa1466910	AT3G58640.2	48.000	75	36	1	1	75	715	786	2.77e-18	77.4
Msa1466910	AT5G01850.1	45.679	81	36	2	2	74	182	262	3.77e-18	76.3
Msa1466910	AT2G31010.1	49.333	75	35	1	1	75	681	752	3.78e-18	77.0
Msa1466910	AT2G31010.2	49.333	75	35	1	1	75	681	752	3.78e-18	77.0
Msa1466910	AT3G22750.1	48.611	72	37	0	3	74	261	332	4.46e-18	76.6
Msa1466910	AT5G01850.2	45.679	81	36	2	2	74	206	286	4.89e-18	76.3
Msa1466910	AT4G14780.1	44.444	72	40	0	3	74	247	318	2.02e-17	74.7
Msa1466910	AT4G31170.7	42.466	73	42	0	2	74	296	368	4.10e-17	73.9
Msa1466910	AT4G31170.6	42.466	73	42	0	2	74	296	368	4.10e-17	73.9
Msa1466910	AT4G31170.5	42.466	73	42	0	2	74	296	368	4.10e-17	73.9
Msa1466910	AT4G31170.1	42.466	73	42	0	2	74	296	368	4.10e-17	73.9
Msa1466910	AT4G31170.2	42.466	73	42	0	2	74	296	368	4.10e-17	73.9
Msa1466910	AT4G31170.3	42.466	73	42	0	2	74	296	368	4.10e-17	73.9
Msa1466910	AT4G31170.8	42.466	73	42	0	2	74	296	368	4.10e-17	73.9
Msa1466910	AT2G24360.1	42.466	73	42	0	2	74	295	367	4.89e-17	73.6
Msa1466910	AT3G63260.1	45.833	72	39	0	3	74	274	345	6.10e-17	73.6
Msa1466910	AT3G24715.1	41.333	75	42	1	3	75	1009	1083	1.24e-16	72.8
Msa1466910	AT3G24715.3	41.333	75	42	1	3	75	1009	1083	1.24e-16	72.8
Msa1466910	AT3G24715.2	41.333	75	42	1	3	75	1009	1083	1.24e-16	72.8
Msa1466910	AT5G58950.1	41.096	73	43	0	3	75	375	447	2.10e-16	72.0
Msa1466910	AT4G38470.1	41.667	72	42	0	3	74	451	522	2.97e-16	71.6
Msa1466910	AT4G35780.1	38.889	72	44	0	3	74	453	524	8.11e-16	70.5
Msa1466910	AT4G38470.2	41.667	72	42	0	3	74	451	522	8.75e-16	70.5
Msa1466910	AT2G35050.1	40.000	75	43	1	3	75	1146	1220	9.71e-16	70.1
Msa1466910	AT2G35050.2	40.000	75	43	1	3	75	1146	1220	9.71e-16	70.1
Msa1466910	AT5G57610.1	44.000	75	40	1	3	75	954	1028	1.12e-15	70.1
Msa1466910	AT1G79570.2	40.000	75	43	1	3	75	1137	1211	1.71e-15	69.3
Msa1466910	AT1G79570.1	40.000	75	43	1	3	75	1137	1211	1.71e-15	69.3
Msa1466910	AT3G46930.1	41.892	74	42	1	3	75	331	404	2.66e-15	68.9
Msa1466910	AT1G04700.1	37.333	75	45	1	3	75	939	1013	3.40e-15	68.6
Msa1466910	AT1G04700.2	37.333	75	45	1	3	75	939	1013	3.40e-15	68.6
Msa1466910	AT1G16270.1	40.000	75	43	1	3	75	1036	1110	4.02e-15	68.6
Msa1466910	AT1G16270.2	40.000	75	43	1	3	75	1036	1110	4.02e-15	68.6
Msa1466910	AT1G16270.3	40.000	75	43	1	3	75	1036	1110	4.02e-15	68.6
Msa1466910	AT5G49470.5	68.889	45	14	0	1	45	653	697	5.32e-15	68.2
Msa1466910	AT3G46930.2	41.892	74	42	1	3	75	366	439	6.01e-15	67.8
Msa1466910	AT2G17700.1	40.278	72	43	0	3	74	447	518	1.15e-14	67.0
Msa1466910	AT3G46920.1	41.333	75	42	1	3	75	979	1053	1.75e-14	66.6
Msa1466910	AT5G49470.6	68.182	44	14	0	1	44	653	696	1.97e-14	66.6
Msa1466910	AT3G46920.2	41.333	75	42	1	3	75	1045	1119	2.05e-14	66.2
Msa1466910	AT3G06630.6	62.222	45	17	0	1	45	512	556	3.50e-14	65.9
Msa1466910	AT3G06630.4	62.222	45	17	0	1	45	596	640	3.96e-14	65.5
Msa1466910	AT3G06630.3	62.222	45	17	0	1	45	596	640	3.96e-14	65.5
Msa1466910	AT3G06630.5	62.222	45	17	0	1	45	596	640	3.96e-14	65.5
Msa1466910	AT5G07140.1	38.158	76	43	1	3	74	485	560	2.20e-13	63.5
Msa1466910	AT5G40540.2	43.750	80	36	4	3	74	115	193	1.74e-12	60.5
Msa1466910	AT5G40540.3	43.750	80	36	4	3	74	94	172	1.97e-12	60.1
Msa1466910	AT5G40540.1	43.750	80	36	4	3	74	191	269	2.74e-12	60.5
Msa1466910	AT5G58520.1	39.474	76	42	1	3	74	506	581	4.19e-12	59.7
Msa1466910	AT5G50180.1	42.500	80	37	4	3	74	185	263	1.11e-11	58.5
Msa1466910	AT3G27560.1	40.000	80	39	3	3	74	191	269	1.19e-11	58.5
Msa1466910	AT3G01490.2	50.000	54	24	1	3	53	294	347	1.80e-11	58.2
Msa1466910	AT5G50000.2	48.000	50	26	0	3	52	268	317	7.55e-11	56.2

Find 27 sgRNAs with CRISPR-Local

Find 34 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCCAGTATTGGCCTCCCTTA+TGG	0.244449	tig0049268:+517	Msa1466910:CDS
TCCATAAGGGAGGCCAATAC+TGG	0.287723	tig0049268:-518	Msa1466910:intergenic
CCTCCCTTATGGAATCTTGT+TGG	0.303802	tig0049268:+528	Msa1466910:CDS
AAGTCTGATGTTTATAGTTT+TGG	0.311358	tig0049268:+256	Msa1466910:CDS
CTCCCTTATGGAATCTTGTT+GGG	0.359987	tig0049268:+529	Msa1466910:CDS
ACATCAGACTTCTCGTTTGT+AGG	0.368339	tig0049268:-244	Msa1466910:intergenic
GCCAATACTGGGGAGACATT+TGG	0.386803	tig0049268:-506	Msa1466910:intergenic
GAGACATTTGGAGGGATAGA+AGG	0.399972	tig0049268:-494	Msa1466910:intergenic
GAGCTGTCGCATTTCAGAAT+AGG	0.418005	tig0049268:+468	Msa1466910:CDS
TCCATTCCATGGTTGTTGTA+AGG	0.427541	tig0049268:-302	Msa1466910:intergenic
CAGCCCAACAAGATTCCATA+AGG	0.462865	tig0049268:-532	Msa1466910:intergenic
TCCAAATGTCTCCCCAGTAT+TGG	0.494916	tig0049268:+505	Msa1466910:CDS
CATGTGTATCCTCAGGTGGT+TGG	0.509740	tig0049268:+446	Msa1466910:intron
CCATAAGGGAGGCCAATACT+GGG	0.514867	tig0049268:-517	Msa1466910:intergenic
AATACTGGGGAGACATTTGG+AGG	0.528815	tig0049268:-503	Msa1466910:intergenic
ATGGCTCCAGAGTTTCTTCG+TGG	0.536115	tig0049268:+217	Msa1466910:CDS
GGTTCTCCACGAAGAAACTC+TGG	0.544195	tig0049268:-223	Msa1466910:intergenic
AACTCTGGAGCCATCCACTC+AGG	0.554183	tig0049268:-208	Msa1466910:intergenic
GAATGGACTTAGCCATGCCC+AGG	0.578828	tig0049268:+318	Msa1466910:CDS
AGCCCAACAAGATTCCATAA+GGG	0.583261	tig0049268:-531	Msa1466910:intergenic
ACCTTACAACAACCATGGAA+TGG	0.583688	tig0049268:+301	Msa1466910:CDS
TCAACGAGTTTACCTGGGCA+TGG	0.589325	tig0049268:-330	Msa1466910:intergenic
GCATGGCTAAGTCCATTCCA+TGG	0.604826	tig0049268:-313	Msa1466910:intergenic
TAGTGACCTTACAACAACCA+TGG	0.641251	tig0049268:+296	Msa1466910:CDS
CCAACAAGATTCCATAAGGG+AGG	0.671201	tig0049268:-528	Msa1466900:intergenic
CATAAGGGAGGCCAATACTG+GGG	0.690145	tig0049268:-516	Msa1466900:intergenic
ATACTGGGGAGACATTTGGA+GGG	0.720295	tig0049268:-502	Msa1466900:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAGTCTGATGTTTATAGTTT+TGG	+	tig0049268:256-275	Msa1466910:CDS	25.0%
!!!	ATAGTTTTGGTGTCATCTTG+TGG	+	tig0049268:269-288	Msa1466910:CDS	35.0%
!!!	TAGTTTTGGTGTCATCTTGT+GGG	+	tig0049268:270-289	Msa1466910:CDS	35.0%
	ATTACTCAACGAGTTTACCT+GGG	-	tig0049268:338-357	Msa1466910:intergenic	35.0%
	AATTACTCAACGAGTTTACC+TGG	-	tig0049268:339-358	Msa1466910:intergenic	35.0%
!	TGCAATGTTTGAAACATGCA+AGG	-	tig0049268:374-393	Msa1466910:intergenic	35.0%
	TAATCTTCATGTGTATCCTC+AGG	+	tig0049268:439-458	Msa1466910:intron	35.0%
	ACATCAGACTTCTCGTTTGT+AGG	-	tig0049268:247-266	Msa1466910:intergenic	40.0%
	TAGTGACCTTACAACAACCA+TGG	+	tig0049268:296-315	Msa1466910:CDS	40.0%
	ACCTTACAACAACCATGGAA+TGG	+	tig0049268:301-320	Msa1466910:CDS	40.0%
	TCCATTCCATGGTTGTTGTA+AGG	-	tig0049268:305-324	Msa1466910:intergenic	40.0%
	CTCCCTTATGGAATCTTGTT+GGG	+	tig0049268:529-548	Msa1466910:CDS	40.0%
	AGCCCAACAAGATTCCATAA+GGG	-	tig0049268:534-553	Msa1466910:intergenic	40.0%
	TCTTCATGTGTATCCTCAGG+TGG	+	tig0049268:442-461	Msa1466910:intron	45.0%
	GAGCTGTCGCATTTCAGAAT+AGG	+	tig0049268:468-487	Msa1466910:CDS	45.0%
	GAGACATTTGGAGGGATAGA+AGG	-	tig0049268:497-516	Msa1466910:intergenic	45.0%
	ATACTGGGGAGACATTTGGA+GGG	-	tig0049268:505-524	Msa1466910:intergenic	45.0%
	AATACTGGGGAGACATTTGG+AGG	-	tig0049268:506-525	Msa1466910:intergenic	45.0%
	TCCAAATGTCTCCCCAGTAT+TGG	+	tig0049268:505-524	Msa1466910:CDS	45.0%
	CCAACAAGATTCCATAAGGG+AGG	-	tig0049268:531-550	Msa1466910:intergenic	45.0%
	CCTCCCTTATGGAATCTTGT+TGG	+	tig0049268:528-547	Msa1466910:CDS	45.0%
	ATGGCTCCAGAGTTTCTTCG+TGG	+	tig0049268:217-236	Msa1466910:CDS	50.0%
	GGTTCTCCACGAAGAAACTC+TGG	-	tig0049268:226-245	Msa1466910:intergenic	50.0%
	GCATGGCTAAGTCCATTCCA+TGG	-	tig0049268:316-335	Msa1466910:intergenic	50.0%
	TCAACGAGTTTACCTGGGCA+TGG	-	tig0049268:333-352	Msa1466910:intergenic	50.0%
	CATGTGTATCCTCAGGTGGT+TGG	+	tig0049268:446-465	Msa1466910:intron	50.0%
	GCCAATACTGGGGAGACATT+TGG	-	tig0049268:509-528	Msa1466910:intergenic	50.0%
	CATAAGGGAGGCCAATACTG+GGG	-	tig0049268:519-538	Msa1466910:intergenic	50.0%
	CCATAAGGGAGGCCAATACT+GGG	-	tig0049268:520-539	Msa1466910:intergenic	50.0%
	TCCATAAGGGAGGCCAATAC+TGG	-	tig0049268:521-540	Msa1466910:intergenic	50.0%
!!	AACTCTGGAGCCATCCACTC+AGG	-	tig0049268:211-230	None:intergenic	55.0%
!	GAATGGACTTAGCCATGCCC+AGG	+	tig0049268:318-337	Msa1466910:CDS	55.0%
!!	CCCAGTATTGGCCTCCCTTA+TGG	+	tig0049268:517-536	Msa1466910:CDS	55.0%
	GCGACAGCTCCAACCACCTG+AGG	-	tig0049268:458-477	Msa1466910:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
tig0049268	gene	208	553	208	ID=Msa1466910;Name=Msa1466910
tig0049268	mRNA	208	553	208	ID=Msa1466910-mRNA-1;Parent=Msa1466910;Name=Msa1466910-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0\|1\|0\|1\|1\|1\|2\|0\|75
tig0049268	exon	208	339	208	ID=Msa1466910-mRNA-1:exon:25166;Parent=Msa1466910-mRNA-1
tig0049268	exon	461	553	461	ID=Msa1466910-mRNA-1:exon:25167;Parent=Msa1466910-mRNA-1
tig0049268	CDS	208	339	208	ID=Msa1466910-mRNA-1:cds;Parent=Msa1466910-mRNA-1
tig0049268	CDS	461	553	461	ID=Msa1466910-mRNA-1:cds;Parent=Msa1466910-mRNA-1

Gene Sequence	>Msa1466910 CCTGAGTGGATGGCTCCAGAGTTTCTTCGTGGAGAACCTACAAACGAGAAGTCTGATGTTTATAGTTTTGGTGTCATCTTGTGGGAACTAGTGACCTTACAACAACCATGGAATGGACTTAGCCATGCCCAGGTGGTTGGAGCTGTCGCATTTCAGAATAGGAGACCTTCTATCCCTCCAAATGTCTCCCCAGTATTGGCCTCCCTTATGGAATCTTGTTGGGCT
Protein sequence	>Msa1466910 PEWMAPEFLRGEPTNEKSDVYSFGVILWELVTLQQPWNGLSHAQVVGAVAFQNRRPSIPPNVSPVLASLMESCWA