AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1466960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1466960 MtrunA17_Chr8g0364671 71.186 118 4 1 1 88 87 204 1.10e-50 162
Msa1466960 MtrunA17_Chr5g0413981 66.116 121 8 2 1 88 87 207 6.26e-44 145
Msa1466960 MtrunA17_Chr8g0373501 38.462 117 40 2 2 88 362 476 2.21e-22 89.4
Msa1466960 MtrunA17_Chr8g0369211 39.831 118 39 2 1 88 653 768 3.66e-22 88.6
Msa1466960 MtrunA17_Chr6g0485761 41.880 117 36 2 2 88 320 434 3.82e-22 88.6
Msa1466960 MtrunA17_Chr5g0403891 38.462 117 40 2 2 88 281 395 4.68e-22 88.2
Msa1466960 MtrunA17_Chr2g0291501 38.983 118 40 2 1 88 663 778 6.69e-22 87.8
Msa1466960 MtrunA17_Chr5g0413511 40.678 118 38 2 1 88 83 198 2.02e-21 86.3
Msa1466960 MtrunA17_Chr2g0320111 41.129 124 34 2 2 88 117 238 3.28e-21 85.5
Msa1466960 MtrunA17_Chr8g0359691 39.167 120 39 2 1 88 688 805 6.60e-21 85.1
Msa1466960 MtrunA17_Chr7g0221191 40.517 116 37 2 2 87 420 533 9.43e-21 84.7
Msa1466960 MtrunA17_Chr2g0286281 40.000 120 38 2 1 88 114 231 1.04e-20 84.3
Msa1466960 MtrunA17_Chr2g0283111 39.831 118 39 2 1 88 635 750 4.22e-20 82.8
Msa1466960 MtrunA17_Chr1g0213991 39.496 119 38 2 2 88 123 239 4.64e-20 82.4
Msa1466960 MtrunA17_Chr4g0071221 40.164 122 34 3 2 88 564 681 6.73e-20 82.4
Msa1466960 MtrunA17_Chr7g0238671 35.833 120 42 2 1 88 107 223 1.36e-19 81.3
Msa1466960 MtrunA17_Chr3g0144481 38.462 117 40 2 2 88 114 228 1.37e-19 81.3
Msa1466960 MtrunA17_Chr7g0237401 39.496 119 38 2 2 88 119 235 1.61e-19 80.9
Msa1466960 MtrunA17_Chr7g0245571 36.752 117 41 2 2 88 123 236 1.93e-19 80.9
Msa1466960 MtrunA17_Chr1g0194541 39.837 123 34 3 2 88 316 434 2.11e-19 80.9
Msa1466960 MtrunA17_Chr2g0315151 36.667 120 42 2 1 88 690 807 2.26e-19 80.9
Msa1466960 MtrunA17_Chr5g0408941 35.345 116 43 2 2 88 124 236 2.68e-19 80.5
Msa1466960 MtrunA17_Chr5g0443691 38.333 120 40 2 1 88 125 242 2.80e-19 80.1
Msa1466960 MtrunA17_Chr7g0270121 39.024 123 35 3 2 88 405 523 3.01e-19 80.5
Msa1466960 MtrunA17_Chr8g0388941 36.752 117 41 2 2 88 103 216 3.15e-19 80.1
Msa1466960 MtrunA17_Chr5g0406841 35.000 120 43 2 1 88 180 296 3.81e-19 80.1
Msa1466960 MtrunA17_Chr3g0143951 36.207 116 42 2 2 88 117 229 4.43e-19 79.7
Msa1466960 MtrunA17_Chr8g0359641 36.290 124 41 2 1 88 687 808 4.69e-19 79.7
Msa1466960 MtrunA17_Chr8g0359651 36.290 124 41 2 1 88 687 808 4.69e-19 79.7
Msa1466960 MtrunA17_Chr3g0129391 38.017 121 39 3 1 88 899 1016 5.73e-19 79.7
Msa1466960 MtrunA17_Chr1g0150741 35.593 118 43 2 1 88 113 227 6.03e-19 79.3
Msa1466960 MtrunA17_Chr8g0365691 38.983 118 39 2 2 88 336 451 6.35e-19 79.3
Msa1466960 MtrunA17_Chr2g0299301 40.336 119 37 2 2 88 1085 1201 7.13e-19 79.3
Msa1466960 MtrunA17_Chr1g0190581 38.655 119 39 2 2 88 547 663 8.44e-19 79.0
Msa1466960 MtrunA17_Chr2g0318301 40.171 117 38 2 2 88 527 641 8.51e-19 79.0
Msa1466960 MtrunA17_Chr8g0352381 38.462 117 40 2 2 88 556 670 1.01e-18 79.0
Msa1466960 MtrunA17_Chr5g0435211 35.833 120 42 2 1 88 109 225 1.11e-18 78.6
Msa1466960 MtrunA17_Chr5g0443531 37.190 121 41 2 1 88 701 819 1.18e-18 78.6
Msa1466960 MtrunA17_Chr6g0453001 35.897 117 43 2 2 88 89 203 1.59e-18 78.2
Msa1466960 MtrunA17_Chr7g0262521 38.843 121 39 3 1 88 370 488 1.61e-18 78.2
Msa1466960 MtrunA17_Chr8g0342071 41.176 119 36 2 2 88 475 591 1.72e-18 78.2
Msa1466960 MtrunA17_Chr3g0079661 38.333 120 39 3 1 88 940 1056 2.67e-18 77.8
Msa1466960 MtrunA17_Chr7g0274261 37.500 120 41 2 1 88 551 668 4.55e-18 77.0
Msa1466960 MtrunA17_Chr3g0136421 34.188 117 44 2 2 88 114 227 5.24e-18 76.6
Msa1466960 MtrunA17_Chr1g0191631 35.833 120 43 2 1 88 175 292 5.61e-18 76.6
Msa1466960 MtrunA17_Chr5g0411631 37.815 119 40 2 2 88 621 737 6.23e-18 76.6
Msa1466960 MtrunA17_Chr2g0314991 35.000 120 44 2 1 88 1201 1318 7.18e-18 76.6
Msa1466960 MtrunA17_Chr2g0314991 35.000 120 44 2 1 88 235 352 5.29e-17 73.9
Msa1466960 MtrunA17_Chr3g0123141 38.136 118 40 2 2 88 633 748 8.18e-18 76.3
Msa1466960 MtrunA17_Chr2g0315061 35.000 120 44 2 1 88 61 178 8.71e-18 75.9
Msa1466960 MtrunA17_Chr2g0328171 35.000 120 43 2 1 88 108 224 9.00e-18 75.9
Msa1466960 MtrunA17_Chr2g0314911 35.000 120 44 2 1 88 686 803 9.69e-18 76.3
Msa1466960 MtrunA17_Chr2g0315081 34.167 120 45 2 1 88 678 795 1.03e-17 75.9
Msa1466960 MtrunA17_Chr4g0066761 35.000 120 43 2 1 88 97 213 1.29e-17 75.5
Msa1466960 MtrunA17_Chr6g0485721 35.897 117 43 2 2 88 123 237 1.47e-17 75.5
Msa1466960 MtrunA17_Chr7g0219651 38.136 118 41 2 1 88 1544 1659 1.93e-17 75.5
Msa1466960 MtrunA17_Chr7g0219651 42.268 97 45 2 1 88 569 663 3.41e-16 71.6
Msa1466960 MtrunA17_Chr5g0438071 33.333 120 46 2 1 88 684 801 2.05e-17 75.1
Msa1466960 MtrunA17_Chr7g0219571 39.316 117 39 2 2 88 560 674 2.16e-17 75.1
Msa1466960 MtrunA17_Chr2g0292501 39.655 116 38 2 3 88 547 660 2.50e-17 75.1
Msa1466960 MtrunA17_Chr3g0111631 32.500 120 46 2 1 88 110 226 2.62e-17 74.7
Msa1466960 MtrunA17_Chr4g0053561 38.462 117 40 2 2 88 466 580 2.88e-17 74.7
Msa1466960 MtrunA17_Chr4g0061081 38.462 117 40 2 2 88 552 666 4.67e-17 74.3
Msa1466960 MtrunA17_Chr8g0336581 34.426 122 44 2 1 88 106 225 5.84e-17 73.9
Msa1466960 MtrunA17_Chr4g0025961 38.462 117 40 2 2 88 553 667 8.46e-17 73.6
Msa1466960 MtrunA17_Chr5g0416011 35.897 117 44 2 1 88 170 284 8.52e-17 73.6
Msa1466960 MtrunA17_Chr7g0265391 36.441 118 43 2 1 88 370 485 8.73e-17 73.6
Msa1466960 MtrunA17_Chr4g0055301 34.426 122 44 2 1 88 99 218 9.15e-17 73.2
Msa1466960 MtrunA17_Chr4g0053521 38.136 118 40 2 2 88 1084 1199 9.94e-17 73.2
Msa1466960 MtrunA17_Chr1g0165521 38.983 118 40 2 1 88 486 601 1.01e-16 73.2
Msa1466960 MtrunA17_Chr4g0031541 33.333 120 45 2 1 88 116 232 1.14e-16 72.8
Msa1466960 MtrunA17_Chr4g0031591 33.898 118 43 2 3 88 128 242 1.33e-16 72.8
Msa1466960 MtrunA17_Chr7g0216551 34.746 118 45 2 1 88 157 272 1.35e-16 72.8
Msa1466960 MtrunA17_Chr8g0362661 35.897 117 44 2 1 88 168 282 1.54e-16 72.8
Msa1466960 MtrunA17_Chr8g0345561 40.000 120 36 3 2 88 834 950 1.84e-16 72.4
Msa1466960 MtrunA17_Chr2g0328211 34.167 120 44 2 1 88 95 211 1.86e-16 72.0
Msa1466960 MtrunA17_Chr1g0183041 37.500 120 40 3 2 88 376 493 3.35e-16 71.6
Msa1466960 MtrunA17_Chr2g0324931 37.302 126 38 4 2 88 710 833 4.81e-16 71.2
Msa1466960 MtrunA17_Chr6g0452761 35.043 117 45 2 1 88 167 281 5.81e-16 70.9
Msa1466960 MtrunA17_Chr2g0326901 36.885 122 40 3 2 88 249 368 6.80e-16 70.9
Msa1466960 MtrunA17_Chr7g0242201 34.454 119 44 2 2 88 69 185 7.38e-16 70.5
Msa1466960 MtrunA17_Chr8g0344141 35.043 117 43 2 2 88 111 224 9.06e-16 70.5
Msa1466960 MtrunA17_Chr3g0104091 33.333 117 46 2 2 88 88 202 1.11e-15 70.1
Msa1466960 MtrunA17_Chr2g0284101 34.454 119 44 2 1 87 323 439 2.03e-15 69.3
Msa1466960 MtrunA17_Chr8g0340891 35.345 116 44 2 2 88 590 703 2.12e-15 69.3
Msa1466960 MtrunA17_Chr7g0262141 36.000 125 41 3 1 88 734 856 2.40e-15 69.3
Msa1466960 MtrunA17_Chr1g0170201 35.398 113 44 3 2 87 384 494 2.50e-15 69.3
Msa1466960 MtrunA17_Chr7g0259211 33.607 122 44 2 2 88 310 429 2.78e-15 68.9
Msa1466960 MtrunA17_Chr8g0340871 35.043 117 44 2 2 88 601 715 3.60e-15 68.9
Msa1466960 MtrunA17_Chr5g0439801 38.261 115 37 4 2 88 291 399 4.07e-15 68.6
Msa1466960 MtrunA17_Chr3g0134321 36.522 115 43 4 1 88 428 539 4.16e-15 68.6
Msa1466960 MtrunA17_Chr4g0053591 38.136 118 40 2 2 88 173 288 4.35e-15 68.6
Msa1466960 MtrunA17_Chr1g0190411 35.537 121 42 3 2 88 735 853 4.62e-15 68.6
Msa1466960 MtrunA17_Chr5g0400701 39.167 120 34 6 1 85 730 845 4.75e-15 68.6
Msa1466960 MtrunA17_Chr1g0159611 34.146 123 44 2 1 88 263 383 5.09e-15 68.2
Msa1466960 MtrunA17_Chr1g0169841 36.441 118 40 4 2 87 838 952 6.09e-15 68.2
Msa1466960 MtrunA17_Chr3g0125471 36.975 119 42 2 1 88 385 501 6.95e-15 68.2
Msa1466960 MtrunA17_Chr8g0367071 34.746 118 42 3 2 88 382 495 8.14e-15 67.8
Msa1466960 MtrunA17_Chr8g0371311 34.711 121 44 2 1 88 101 219 9.11e-15 67.4
Msa1466960 MtrunA17_Chr6g0478111 57.143 49 19 1 40 88 822 868 1.36e-14 67.0
Msa1466960 MtrunA17_Chr4g0017251 33.058 121 44 3 1 88 702 818 1.39e-14 67.0
Msa1466960 MtrunA17_Chr8g0340911 34.483 116 45 2 2 88 592 705 1.78e-14 67.0
Msa1466960 MtrunA17_Chr3g0144551 33.333 120 46 2 1 88 158 275 1.98e-14 66.6
Msa1466960 MtrunA17_Chr5g0443121 34.454 119 44 2 2 88 208 324 2.01e-14 66.6
Msa1466960 MtrunA17_Chr6g0487061 57.143 49 19 1 40 88 801 847 2.91e-14 66.2
Msa1466960 MtrunA17_Chr1g0158231 35.000 120 44 2 1 88 151 268 3.00e-14 66.2
Msa1466960 MtrunA17_Chr3g0125451 36.134 119 43 2 1 88 445 561 3.02e-14 66.2
Msa1466960 MtrunA17_Chr3g0106121 35.652 115 44 4 1 88 539 650 3.06e-14 66.2
Msa1466960 MtrunA17_Chr1g0204461 63.265 49 16 1 39 87 768 814 3.15e-14 66.2
Msa1466960 MtrunA17_Chr1g0158211 35.000 120 44 2 1 88 173 290 3.26e-14 65.9
Msa1466960 MtrunA17_Chr3g0125431 36.975 119 42 2 1 88 450 566 3.36e-14 65.9
Msa1466960 MtrunA17_Chr1g0158201 35.000 120 44 2 1 88 435 552 4.12e-14 65.9
Msa1466960 MtrunA17_Chr1g0158261 35.000 120 44 2 1 88 431 548 4.29e-14 65.9
Msa1466960 MtrunA17_Chr2g0313911 33.613 119 43 3 3 88 98 213 4.44e-14 65.5
Msa1466960 MtrunA17_Chr6g0487031 55.102 49 20 1 40 88 801 847 5.18e-14 65.5
Msa1466960 MtrunA17_Chr3g0125491 36.975 119 42 2 1 88 81 197 5.18e-14 65.5
Msa1466960 MtrunA17_Chr1g0158171 35.833 120 43 3 1 88 162 279 5.43e-14 65.5
Msa1466960 MtrunA17_Chr1g0196391 32.787 122 45 2 2 88 321 440 5.43e-14 65.5
Msa1466960 MtrunA17_Chr4g0046511 36.667 120 40 4 3 88 720 837 5.43e-14 65.5
Msa1466960 MtrunA17_Chr3g0109431 34.454 119 45 3 1 88 352 468 5.53e-14 65.5
Msa1466960 MtrunA17_Chr8g0392871 36.441 118 41 3 2 88 763 877 6.48e-14 65.1
Msa1466960 MtrunA17_Chr3g0106211 35.345 116 45 4 1 88 543 656 7.07e-14 65.1
Msa1466960 MtrunA17_Chr3g0106151 34.783 115 45 4 1 88 529 640 7.14e-14 65.1
Msa1466960 MtrunA17_Chr8g0348451 33.613 119 45 2 2 88 169 285 7.54e-14 65.1
Msa1466960 MtrunA17_Chr2g0279661 36.134 119 43 2 1 88 455 571 7.85e-14 65.1
Msa1466960 MtrunA17_Chr2g0278831 34.167 120 44 3 1 87 317 434 8.00e-14 65.1
Msa1466960 MtrunA17_Chr1g0158251 34.167 120 45 2 1 88 440 557 8.00e-14 65.1
Msa1466960 MtrunA17_Chr2g0282831 37.624 101 31 3 18 88 711 809 8.17e-14 65.1
Msa1466960 MtrunA17_Chr1g0151041 35.345 116 42 2 2 86 648 761 9.09e-14 64.7
Msa1466960 MtrunA17_Chr1g0200911 35.833 120 42 3 1 87 328 445 1.11e-13 64.7
Msa1466960 MtrunA17_Chr3g0140861 57.143 49 19 1 40 88 755 801 1.22e-13 64.3
Msa1466960 MtrunA17_Chr1g0183231 35.484 124 42 3 1 88 726 847 1.24e-13 64.3
Msa1466960 MtrunA17_Chr7g0248881 36.066 122 39 4 1 88 379 495 1.27e-13 64.3
Msa1466960 MtrunA17_Chr3g0125461 36.134 119 43 2 1 88 468 584 1.28e-13 64.3
Msa1466960 MtrunA17_Chr3g0106191 34.783 115 45 4 1 88 450 561 1.59e-13 63.9
Msa1466960 MtrunA17_Chr4g0028841 33.333 123 45 3 1 88 252 372 1.60e-13 63.9
Msa1466960 MtrunA17_Chr6g0486961 32.308 130 43 3 2 88 700 827 1.63e-13 63.9
Msa1466960 MtrunA17_Chr0c01g0489481 35.897 117 43 2 2 88 356 470 1.77e-13 63.9
Msa1466960 MtrunA17_Chr8g0366981 33.051 118 44 3 2 88 328 441 1.96e-13 63.9
Msa1466960 MtrunA17_Chr8g0337671 36.190 105 34 2 15 88 344 446 2.92e-13 63.5
Msa1466960 MtrunA17_Chr3g0140551 42.466 73 35 2 15 87 788 853 3.47e-13 63.2
Msa1466960 MtrunA17_Chr3g0106221 34.483 116 46 4 1 88 548 661 4.05e-13 63.2
Msa1466960 MtrunA17_Chr2g0278891 35.849 106 34 2 14 87 333 436 4.37e-13 62.8
Msa1466960 MtrunA17_Chr1g0158291 35.000 120 44 2 1 88 77 194 4.88e-13 62.8
Msa1466960 MtrunA17_Chr8g0382101 36.364 121 38 4 2 87 308 424 5.40e-13 62.8
Msa1466960 MtrunA17_Chr2g0278861 35.833 120 42 3 1 87 313 430 5.56e-13 62.4
Msa1466960 MtrunA17_Chr7g0222321 35.000 120 43 3 2 88 754 871 5.87e-13 62.4
Msa1466960 MtrunA17_Chr2g0278871 35.000 120 43 3 1 87 318 435 6.08e-13 62.4
Msa1466960 MtrunA17_Chr7g0237331 36.283 113 42 4 3 88 539 648 6.47e-13 62.4
Msa1466960 MtrunA17_Chr5g0413291 35.000 120 43 3 1 87 326 443 6.83e-13 62.4
Msa1466960 MtrunA17_Chr8g0341131 38.542 96 48 3 2 88 43 136 8.82e-13 60.1
Msa1466960 MtrunA17_Chr7g0237341 35.088 114 44 4 2 88 537 647 9.37e-13 62.0
Msa1466960 MtrunA17_Chr3g0080881 33.621 116 42 2 2 87 98 208 1.02e-12 61.6
Msa1466960 MtrunA17_Chr6g0488761 33.621 116 46 2 2 88 510 623 1.44e-12 61.2
Msa1466960 MtrunA17_Chr4g0030471 31.579 114 50 2 1 88 111 222 1.64e-12 61.2
Msa1466960 MtrunA17_Chr0c04g0492001 34.783 115 45 4 1 88 545 656 1.86e-12 61.2
Msa1466960 MtrunA17_Chr0c04g0492031 34.783 115 45 4 1 88 545 656 1.86e-12 61.2
Msa1466960 MtrunA17_Chr3g0134291 34.783 115 45 4 1 88 545 656 1.86e-12 61.2
Msa1466960 MtrunA17_Chr1g0191381 32.203 118 48 3 1 88 177 292 2.04e-12 60.8
Msa1466960 MtrunA17_Chr7g0222251 34.167 120 44 3 2 88 66 183 2.10e-12 60.1
Msa1466960 MtrunA17_Chr8g0366931 33.051 118 44 3 2 88 52 165 2.16e-12 60.8
Msa1466960 MtrunA17_Chr1g0155161 30.081 123 46 3 2 88 485 603 2.37e-12 60.8
Msa1466960 MtrunA17_Chr7g0252301 33.333 117 46 3 1 87 879 993 2.38e-12 60.8
Msa1466960 MtrunA17_Chr7g0274661 34.746 118 42 4 2 88 399 512 3.30e-12 60.5
Msa1466960 MtrunA17_Chr4g0060011 32.174 115 45 2 3 86 341 453 3.48e-12 60.5
Msa1466960 MtrunA17_Chr7g0274651 34.746 118 42 4 2 88 396 509 3.78e-12 60.1
Msa1466960 MtrunA17_Chr4g0049581 33.898 118 43 3 2 88 377 490 3.83e-12 60.1
Msa1466960 MtrunA17_Chr8g0341251 38.384 99 44 3 2 88 74 167 3.88e-12 60.1
Msa1466960 MtrunA17_Chr2g0296591 50.000 58 27 2 30 87 1037 1092 3.96e-12 60.1
Msa1466960 MtrunA17_Chr2g0296601 50.000 58 27 2 30 87 1037 1092 4.32e-12 60.1
Msa1466960 MtrunA17_Chr7g0222221 47.222 72 34 3 17 88 96 163 4.73e-12 59.7
Msa1466960 MtrunA17_Chr4g0049601 34.746 118 42 3 2 88 385 498 4.74e-12 60.1
Msa1466960 MtrunA17_Chr7g0222261 47.222 72 34 3 17 88 205 272 5.16e-12 59.7
Msa1466960 MtrunA17_Chr8g0366991 33.645 107 36 3 13 88 508 610 9.44e-12 58.9
Msa1466960 MtrunA17_Chr8g0341081 40.625 96 46 3 2 88 73 166 1.10e-11 58.9
Msa1466960 MtrunA17_Chr4g0069061 51.020 49 21 1 40 88 12 57 1.37e-11 57.8
Msa1466960 MtrunA17_Chr4g0076271 51.020 49 22 1 40 88 67 113 1.50e-11 58.2
Msa1466960 MtrunA17_Chr3g0106201 33.043 115 47 4 1 88 534 645 1.83e-11 58.2
Msa1466960 MtrunA17_Chr8g0366971 32.203 118 45 3 2 88 102 215 2.63e-11 57.8
Msa1466960 MtrunA17_Chr1g0150011 34.454 119 43 3 1 88 207 321 2.79e-11 57.8
Msa1466960 MtrunA17_Chr5g0409041 52.000 50 22 1 39 88 397 444 3.24e-11 57.4
Msa1466960 MtrunA17_Chr2g0278851 32.203 118 46 3 2 87 297 412 4.24e-11 57.4
Msa1466960 MtrunA17_Chr1g0147731 31.897 116 48 2 2 88 426 539 4.61e-11 57.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1466960 AT1G24030.4 60.331 121 15 2 1 88 86 206 1.33e-42 140
Msa1466960 AT1G24030.5 60.331 121 15 2 1 88 86 206 1.44e-41 136
Msa1466960 AT1G24030.3 60.331 121 15 2 1 88 32 152 2.07e-41 137
Msa1466960 AT1G24030.2 60.331 121 15 2 1 88 86 206 1.18e-40 137
Msa1466960 AT1G24030.1 60.331 121 15 2 1 88 100 220 1.68e-40 137
Msa1466960 AT1G24030.6 58.261 115 15 2 7 88 1 115 1.04e-37 127
Msa1466960 AT1G49270.1 41.525 118 36 2 2 88 361 476 4.73e-23 91.7
Msa1466960 AT4G13190.4 40.000 120 38 2 1 88 96 213 7.28e-23 89.4
Msa1466960 AT4G13190.5 40.000 120 38 2 1 88 7 124 1.78e-22 88.2
Msa1466960 AT1G79620.2 41.525 118 37 2 1 88 662 777 2.09e-22 89.7
Msa1466960 AT1G79620.1 41.525 118 37 2 1 88 662 777 2.11e-22 89.7
Msa1466960 AT1G79620.5 41.525 118 37 2 1 88 688 803 2.11e-22 89.7
Msa1466960 AT4G13190.1 40.000 120 38 2 1 88 96 213 2.18e-22 89.0
Msa1466960 AT3G18810.1 41.026 117 37 2 2 88 362 476 7.21e-22 88.2
Msa1466960 AT4G02010.1 40.496 121 36 2 2 88 405 523 1.80e-21 87.0
Msa1466960 AT1G06840.1 40.678 118 38 2 1 88 649 764 1.92e-21 87.0
Msa1466960 AT3G58690.1 40.164 122 36 2 2 88 112 231 2.21e-21 86.3
Msa1466960 AT4G34440.2 39.316 117 39 2 2 88 337 451 2.43e-21 86.7
Msa1466960 AT4G34440.1 39.316 117 39 2 2 88 337 451 2.43e-21 86.7
Msa1466960 AT5G01950.6 41.525 118 37 2 1 88 650 765 5.82e-21 85.5
Msa1466960 AT5G49770.1 38.136 118 41 2 1 88 658 773 6.78e-21 85.5
Msa1466960 AT5G49760.1 37.288 118 42 2 1 88 655 770 7.78e-21 85.5
Msa1466960 AT1G10620.1 40.171 117 38 2 2 88 395 509 1.04e-20 85.1
Msa1466960 AT5G01950.3 41.525 118 37 2 1 88 650 765 1.06e-20 85.1
Msa1466960 AT5G01950.1 41.525 118 37 2 1 88 650 765 1.06e-20 85.1
Msa1466960 AT5G01950.4 41.525 118 37 2 1 88 650 765 1.06e-20 85.1
Msa1466960 AT5G01950.8 41.525 118 37 2 1 88 650 765 1.06e-20 85.1
Msa1466960 AT5G01950.2 41.525 118 37 2 1 88 565 680 1.09e-20 84.7
Msa1466960 AT5G49780.1 36.441 118 43 2 1 88 558 673 1.88e-20 84.3
Msa1466960 AT5G49780.3 36.441 118 43 2 1 88 657 772 1.89e-20 84.3
Msa1466960 AT5G49780.2 36.441 118 43 2 1 88 679 794 1.89e-20 84.3
Msa1466960 AT5G13160.1 40.000 120 38 2 1 88 111 228 2.81e-20 83.6
Msa1466960 AT3G24790.1 39.167 120 39 2 1 88 72 189 3.52e-20 82.8
Msa1466960 AT5G02290.2 35.833 120 42 2 1 88 102 218 3.84e-20 82.8
Msa1466960 AT5G02290.1 35.833 120 42 2 1 88 102 218 3.84e-20 82.8
Msa1466960 AT3G20530.2 38.017 121 40 2 1 88 107 225 4.17e-20 82.0
Msa1466960 AT1G70460.1 37.288 118 42 2 1 88 377 492 4.65e-20 83.2
Msa1466960 AT5G01950.7 39.837 123 37 2 1 88 650 770 5.24e-20 82.8
Msa1466960 AT3G24550.1 39.316 117 39 2 2 88 305 419 6.19e-20 82.8
Msa1466960 AT1G23540.2 37.288 118 42 2 1 88 395 510 7.42e-20 82.4
Msa1466960 AT1G23540.1 37.288 118 42 2 1 88 395 510 7.57e-20 82.4
Msa1466960 AT3G20530.1 38.017 121 40 2 1 88 107 225 7.73e-20 82.0
Msa1466960 AT5G38990.1 38.017 121 40 2 1 88 550 668 7.86e-20 82.4
Msa1466960 AT5G07280.1 38.333 120 38 3 2 88 942 1058 9.37e-20 82.4
Msa1466960 AT5G01020.1 36.752 117 41 2 2 88 101 214 1.39e-19 81.6
Msa1466960 AT5G56890.1 41.176 119 36 2 2 88 748 864 1.58e-19 81.6
Msa1466960 AT5G39000.1 37.190 121 41 2 1 88 543 661 1.83e-19 81.3
Msa1466960 AT1G52290.2 37.288 118 42 2 1 88 167 282 2.23e-19 80.9
Msa1466960 AT3G24790.2 39.167 120 39 2 1 88 90 207 2.54e-19 80.5
Msa1466960 AT2G18470.4 42.241 116 35 2 2 87 309 422 2.61e-19 80.9
Msa1466960 AT2G18470.1 42.241 116 35 2 2 87 309 422 2.66e-19 80.9
Msa1466960 AT2G18470.3 42.241 116 35 2 2 87 309 422 2.66e-19 80.9
Msa1466960 AT2G18470.2 42.241 116 35 2 2 87 309 422 2.66e-19 80.9
Msa1466960 AT1G52290.1 37.288 118 42 2 1 88 167 282 3.01e-19 80.9
Msa1466960 AT3G46290.1 39.316 117 39 2 2 88 510 624 4.79e-19 80.1
Msa1466960 AT5G38560.1 38.793 116 39 2 2 87 364 477 5.08e-19 80.1
Msa1466960 AT1G53420.1 35.000 120 44 2 1 88 648 765 9.62e-19 79.3
Msa1466960 AT5G59650.1 40.678 118 37 3 2 88 604 719 1.29e-18 79.0
Msa1466960 AT5G59650.2 40.678 118 37 3 2 88 612 727 1.29e-18 79.0
Msa1466960 AT5G37450.1 38.136 118 41 3 1 88 631 746 1.38e-18 79.0
Msa1466960 AT5G37450.2 38.136 118 41 3 1 88 679 794 1.38e-18 79.0
Msa1466960 AT2G17220.1 35.000 120 43 2 1 88 119 235 1.49e-18 78.6
Msa1466960 AT2G17220.2 35.000 120 43 2 1 88 118 234 1.50e-18 78.6
Msa1466960 AT5G37450.4 38.136 118 41 3 1 88 452 567 1.60e-18 78.6
Msa1466960 AT5G37450.3 38.136 118 41 3 1 88 655 770 1.60e-18 78.6
Msa1466960 AT2G28930.1 35.833 120 42 2 1 88 114 230 1.97e-18 78.2
Msa1466960 AT2G28930.2 35.833 120 42 2 1 88 103 219 2.01e-18 78.2
Msa1466960 AT5G28680.1 40.171 117 38 2 2 88 546 660 2.09e-18 78.6
Msa1466960 AT5G28680.2 40.171 117 38 2 2 88 546 660 2.09e-18 78.6
Msa1466960 AT2G28970.2 38.983 118 39 2 2 88 469 584 2.10e-18 78.6
Msa1466960 AT2G28970.1 38.983 118 39 2 2 88 504 619 2.10e-18 78.6
Msa1466960 AT2G28930.3 35.833 120 42 2 1 88 106 222 2.11e-18 78.2
Msa1466960 AT5G54380.1 39.316 117 39 2 2 88 535 649 2.69e-18 78.2
Msa1466960 AT1G53440.1 36.975 119 41 2 2 88 692 808 3.39e-18 77.8
Msa1466960 AT1G61590.1 37.607 117 40 2 2 88 131 244 3.58e-18 77.4
Msa1466960 AT5G59700.1 37.607 117 41 2 2 88 507 621 4.04e-18 77.4
Msa1466960 AT1G14370.1 35.593 118 43 2 1 88 120 234 4.21e-18 77.4
Msa1466960 AT1G53430.2 36.134 119 42 2 2 88 653 769 5.15e-18 77.4
Msa1466960 AT1G53430.1 36.134 119 42 2 2 88 694 810 5.15e-18 77.4
Msa1466960 AT5G15080.1 34.483 116 45 2 2 88 177 290 5.43e-18 77.0
Msa1466960 AT3G26940.1 36.134 119 42 2 2 88 99 215 8.59e-18 76.6
Msa1466960 AT2G28590.2 36.667 120 42 2 1 88 123 240 1.06e-17 75.9
Msa1466960 AT5G59680.1 38.983 118 39 3 2 88 605 720 1.06e-17 76.3
Msa1466960 AT1G30570.1 40.678 118 38 2 1 88 544 659 1.07e-17 76.3
Msa1466960 AT2G21480.1 40.171 117 38 2 2 88 550 664 1.14e-17 76.3
Msa1466960 AT2G28960.2 34.746 118 44 2 2 88 598 713 1.28e-17 76.3
Msa1466960 AT2G20300.1 40.351 114 39 2 2 88 374 485 1.31e-17 76.3
Msa1466960 AT2G19190.1 36.752 117 42 2 2 88 598 712 1.38e-17 76.3
Msa1466960 AT5G61350.1 37.398 123 39 2 2 88 550 670 1.41e-17 75.9
Msa1466960 AT2G28960.1 34.746 118 44 2 2 88 466 581 1.46e-17 75.9
Msa1466960 AT2G28590.1 36.667 120 42 2 1 88 123 240 1.61e-17 75.9
Msa1466960 AT1G55610.1 35.772 123 41 3 1 88 883 1002 3.13e-17 75.1
Msa1466960 AT1G55610.2 35.772 123 41 3 1 88 883 1002 3.13e-17 75.1
Msa1466960 AT4G39110.1 38.462 117 40 2 2 88 551 665 3.19e-17 75.1
Msa1466960 AT3G13380.1 36.066 122 41 3 1 88 882 1000 3.70e-17 74.7
Msa1466960 AT1G29750.3 36.667 120 42 2 1 88 705 822 3.84e-17 74.7
Msa1466960 AT1G29750.1 36.667 120 42 2 1 88 690 807 3.86e-17 74.7
Msa1466960 AT1G29750.2 36.667 120 42 2 1 88 705 822 3.87e-17 74.7
Msa1466960 AT5G24010.1 38.462 117 40 2 2 88 514 628 3.91e-17 74.7
Msa1466960 AT3G01300.1 33.621 116 46 2 2 88 171 284 4.01e-17 74.7
Msa1466960 AT1G29740.2 34.746 118 45 2 1 88 701 816 4.14e-17 74.7
Msa1466960 AT1G29740.1 34.746 118 45 2 1 88 701 816 4.15e-17 74.7
Msa1466960 AT2G07180.1 35.897 117 42 2 2 88 122 235 6.11e-17 74.3
Msa1466960 AT2G07180.2 35.897 117 42 2 2 88 122 235 6.11e-17 74.3
Msa1466960 AT1G07570.1 35.833 120 42 2 1 88 102 218 6.21e-17 73.9
Msa1466960 AT1G07570.5 35.833 120 42 2 1 88 102 218 6.21e-17 73.9
Msa1466960 AT1G07570.2 35.833 120 42 2 1 88 102 218 6.21e-17 73.9
Msa1466960 AT2G39360.1 38.983 118 39 2 2 88 512 627 6.74e-17 73.9
Msa1466960 AT1G72300.1 37.815 119 38 3 2 87 828 943 7.09e-17 73.9
Msa1466960 AT1G07570.3 35.833 120 42 2 1 88 113 229 7.96e-17 73.9
Msa1466960 AT5G07180.2 37.288 118 41 3 2 88 580 695 1.47e-16 73.2
Msa1466960 AT5G07180.1 37.288 118 41 3 2 88 676 791 1.48e-16 73.2
Msa1466960 AT2G14510.1 36.667 120 39 3 2 88 587 702 1.79e-16 72.8
Msa1466960 AT2G14510.2 36.667 120 39 3 2 88 595 710 1.79e-16 72.8
Msa1466960 AT1G07550.1 38.462 117 39 2 3 88 585 699 1.99e-16 72.8
Msa1466960 AT3G28690.1 33.333 117 47 2 1 88 60 174 2.04e-16 72.4
Msa1466960 AT3G28690.3 33.333 117 47 2 1 88 109 223 2.34e-16 72.4
Msa1466960 AT3G28690.2 33.333 117 47 2 1 88 160 274 2.55e-16 72.4
Msa1466960 AT2G23200.1 38.793 116 40 2 3 88 514 628 3.82e-16 72.0
Msa1466960 AT5G62230.2 37.607 117 40 3 2 87 625 739 4.40e-16 71.6
Msa1466960 AT5G62230.1 37.607 117 40 3 2 87 673 787 4.41e-16 71.6
Msa1466960 AT3G46330.2 36.441 118 42 2 2 88 567 682 7.87e-16 71.2
Msa1466960 AT3G46330.1 36.441 118 42 2 2 88 591 706 7.88e-16 71.2
Msa1466960 AT3G46340.1 37.500 120 38 3 2 88 611 726 1.02e-15 70.9
Msa1466960 AT5G56460.1 36.111 108 36 2 11 88 120 224 1.09e-15 70.5
Msa1466960 AT5G45780.2 35.294 119 43 2 1 87 281 397 1.15e-15 70.5
Msa1466960 AT5G45780.1 35.294 119 43 2 1 87 324 440 1.15e-15 70.5
Msa1466960 AT1G05700.1 36.752 117 42 2 2 88 594 708 1.43e-15 70.5
Msa1466960 AT1G05700.2 36.752 117 42 2 2 88 625 739 1.43e-15 70.5
Msa1466960 AT2G29000.1 33.333 120 43 3 2 88 590 705 3.64e-15 69.3
Msa1466960 AT2G28250.2 38.017 121 38 3 3 88 236 354 3.69e-15 69.3
Msa1466960 AT2G28250.5 38.017 121 38 3 3 88 236 354 3.69e-15 69.3
Msa1466960 AT2G28250.4 38.017 121 38 3 3 88 236 354 3.69e-15 69.3
Msa1466960 AT2G28250.1 38.017 121 38 3 3 88 236 354 3.69e-15 69.3
Msa1466960 AT2G28250.6 38.017 121 38 3 3 88 236 354 3.69e-15 69.3
Msa1466960 AT2G28250.3 38.017 121 38 3 3 88 236 354 3.69e-15 69.3
Msa1466960 AT2G26330.1 35.593 118 43 2 2 88 673 788 4.48e-15 68.9
Msa1466960 AT4G11490.1 29.661 118 50 2 2 88 346 461 4.98e-15 68.9
Msa1466960 AT1G51870.1 34.746 118 44 3 2 88 555 670 7.84e-15 68.2
Msa1466960 AT1G51870.2 34.746 118 44 3 2 88 607 722 7.86e-15 68.2
Msa1466960 AT1G78530.2 33.913 115 44 3 3 88 101 212 9.47e-15 67.4
Msa1466960 AT1G21240.2 35.294 119 44 2 1 88 178 294 1.06e-14 67.8
Msa1466960 AT1G21250.1 35.294 119 44 2 1 88 433 549 1.10e-14 67.8
Msa1466960 AT1G21240.1 35.294 119 44 2 1 88 439 555 1.10e-14 67.8
Msa1466960 AT1G72180.1 50.877 57 26 1 32 88 775 829 1.30e-14 67.8
Msa1466960 AT4G33430.1 35.833 120 42 3 1 87 313 430 1.62e-14 67.4
Msa1466960 AT4G33430.2 35.833 120 42 3 1 87 360 477 1.74e-14 67.4
Msa1466960 AT1G21210.1 36.134 119 43 2 1 88 434 550 2.06e-14 67.0
Msa1466960 AT1G21270.1 35.294 119 44 2 1 88 428 544 2.21e-14 67.0
Msa1466960 AT1G21230.1 35.294 119 44 2 1 88 432 548 4.59e-14 66.2
Msa1466960 AT5G10530.1 36.134 119 41 3 1 88 360 474 4.65e-14 65.9
Msa1466960 AT1G78530.1 34.783 115 43 4 3 88 101 212 5.28e-14 65.9
Msa1466960 AT1G18160.1 38.655 119 39 3 1 88 738 853 5.71e-14 65.9
Msa1466960 AT1G18160.2 38.655 119 39 3 1 88 738 853 5.92e-14 65.9
Msa1466960 AT4G28490.1 63.265 49 16 2 40 88 788 834 6.94e-14 65.5
Msa1466960 AT4G13190.2 57.143 49 19 1 40 88 20 66 7.21e-14 64.3
Msa1466960 AT4G13190.3 57.143 49 19 1 40 88 20 66 7.21e-14 64.3
Msa1466960 AT1G16110.1 33.058 121 46 2 1 88 456 574 1.20e-13 64.7
Msa1466960 AT5G59660.2 41.935 93 46 4 2 88 513 603 1.25e-13 64.7
Msa1466960 AT5G59660.1 41.935 93 46 4 2 88 535 625 1.25e-13 64.7
Msa1466960 AT5G59660.3 41.935 93 46 4 2 88 538 628 1.25e-13 64.7
Msa1466960 AT1G01540.1 34.454 119 44 2 2 88 179 295 1.32e-13 64.7
Msa1466960 AT2G13790.1 35.833 120 42 3 1 87 318 435 1.71e-13 64.3
Msa1466960 AT1G71830.1 35.833 120 42 3 1 87 326 443 1.71e-13 64.3
Msa1466960 AT2G33170.2 62.500 48 16 1 40 87 921 966 1.92e-13 64.3
Msa1466960 AT2G33170.1 62.500 48 16 1 40 87 921 966 1.92e-13 64.3
Msa1466960 AT4G28650.1 34.400 125 43 3 1 88 724 846 2.07e-13 64.3
Msa1466960 AT1G01540.2 34.454 119 44 2 2 88 179 295 2.08e-13 64.3
Msa1466960 AT2G48010.1 32.787 122 45 2 2 88 308 427 2.23e-13 63.9
Msa1466960 AT4G20140.1 54.237 59 25 2 29 87 1042 1098 3.56e-13 63.5
Msa1466960 AT1G17230.3 34.167 120 44 3 1 87 823 940 3.74e-13 63.5
Msa1466960 AT1G17230.2 34.167 120 44 3 1 87 823 940 3.76e-13 63.5
Msa1466960 AT1G17230.1 34.167 120 44 3 1 87 823 940 4.23e-13 63.2
Msa1466960 AT3G46410.1 38.182 110 31 3 12 88 22 127 4.28e-13 62.8
Msa1466960 AT3G25490.1 33.613 119 46 2 1 88 132 248 4.52e-13 63.2
Msa1466960 AT3G06630.2 32.353 102 37 2 16 88 474 572 1.17e-12 62.0
Msa1466960 AT3G06630.4 32.353 102 37 2 16 88 474 572 1.17e-12 62.0
Msa1466960 AT3G06630.3 32.353 102 37 2 16 88 474 572 1.17e-12 62.0
Msa1466960 AT3G06630.5 32.353 102 37 2 16 88 474 572 1.17e-12 62.0
Msa1466960 AT3G06630.7 32.353 102 37 2 16 88 474 572 1.23e-12 62.0
Msa1466960 AT3G06630.6 32.353 102 37 2 16 88 390 488 1.30e-12 62.0
Msa1466960 AT3G06630.1 32.353 102 37 2 16 88 474 572 1.31e-12 62.0
Msa1466960 AT1G07570.4 35.922 103 31 2 18 88 3 102 1.59e-12 61.2
Msa1466960 AT5G25930.1 34.545 110 34 3 15 88 727 834 1.82e-12 61.6
Msa1466960 AT5G49660.1 33.333 102 37 2 16 88 704 803 2.10e-12 61.2
Msa1466960 AT5G65600.1 32.500 120 45 3 1 88 375 490 2.42e-12 61.2
Msa1466960 AT5G63930.1 36.275 102 34 2 15 87 847 946 4.75e-12 60.5
Msa1466960 AT5G63930.2 36.275 102 34 2 15 87 783 882 4.88e-12 60.5
Msa1466960 AT5G44700.1 58.333 48 18 2 40 87 1048 1093 9.16e-12 59.7
Msa1466960 AT4G00960.2 34.694 98 38 2 9 82 1 96 9.41e-12 59.3
Msa1466960 AT1G16760.1 32.759 116 47 2 2 88 474 587 1.30e-11 58.9
Msa1466960 AT5G65700.1 60.000 50 18 2 38 87 787 834 1.30e-11 58.9
Msa1466960 AT5G65700.2 60.000 50 18 2 38 87 787 834 1.30e-11 58.9
Msa1466960 AT3G49670.1 60.000 50 18 2 38 87 783 830 1.37e-11 58.9
Msa1466960 AT1G16760.2 32.759 116 47 2 2 88 474 587 1.41e-11 58.9
Msa1466960 AT2G35620.3 54.000 50 21 1 39 88 395 442 1.84e-11 58.5
Msa1466960 AT2G35620.1 54.000 50 21 1 39 88 395 442 1.84e-11 58.5
Msa1466960 AT2G35620.2 54.000 50 21 1 39 88 395 442 1.84e-11 58.5
Msa1466960 AT2G35620.4 54.000 50 21 1 39 88 395 442 1.84e-11 58.5
Msa1466960 AT1G31420.2 52.000 50 22 1 39 88 397 444 4.06e-11 57.8
Msa1466960 AT1G31420.1 52.000 50 22 1 39 88 398 445 4.10e-11 57.8
Msa1466960 AT1G31420.3 52.000 50 22 1 39 88 398 445 4.10e-11 57.8

Find 21 sgRNAs with CRISPR-Local

Find 44 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAATCTTGTTTCTTTGAT+AGG 0.189377 tig0049447:+405 Msa1466960:CDS
CAGTACCTTTGCTTCAAAAT+TGG 0.264156 tig0049447:-933 None:intergenic
CCTATCAAAGAAACAAGATT+TGG 0.305917 tig0049447:-405 None:intergenic
GGTTGTAGCAATAAAGAAAA+TGG 0.319992 tig0049447:+314 None:intergenic
ATTGGCATCTAAAAGAATAT+TGG 0.357195 tig0049447:-915 Msa1466960:intergenic
TTGAAATCTCTATGAACAAT+AGG 0.371309 tig0049447:-887 Msa1466960:intergenic
TCACGCTCTCCCTCAATTGC+AGG 0.378847 tig0049447:-342 Msa1466960:intergenic
AATGCCACTCTTAGTCTTTG+AGG 0.406117 tig0049447:-812 Msa1466960:intergenic
CAAATCTTGTTTCTTTGATA+GGG 0.425776 tig0049447:+406 Msa1466960:CDS
AATGGAAATGCCTGCAATTG+AGG 0.440822 tig0049447:+332 Msa1466960:CDS
ATGGAAATGCCTGCAATTGA+GGG 0.463519 tig0049447:+333 Msa1466960:CDS
CTATCAAAGAAACAAGATTT+GGG 0.463686 tig0049447:-404 Msa1466960:intergenic
CTCCACTCAAGTTCTTGTGT+TGG 0.471535 tig0049447:+860 Msa1466960:CDS
GTGGCATTAGGAGCTGCAAA+AGG 0.479599 tig0049447:+827 Msa1466960:CDS
GGCATCTAAAAGAATATTGG+TGG 0.493076 tig0049447:-912 Msa1466960:intergenic
CAAAGACTAAGAGTGGCATT+AGG 0.499136 tig0049447:+815 Msa1466960:CDS
TAGAAGTTGACATGTTGAGC+AGG 0.556161 tig0049447:+373 Msa1466960:CDS
TGGCATTAGGAGCTGCAAAA+GGG 0.591183 tig0049447:+828 Msa1466960:CDS
TTCCAACACAAGAACTTGAG+TGG 0.597238 tig0049447:-862 Msa1466960:intergenic
TTGGCCTCAAAGACTAAGAG+TGG 0.626921 tig0049447:+808 Msa1466960:CDS
TCAAAGAAACAAGATTTGGG+TGG 0.671002 tig0049447:-401 Msa1466950:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATGCATATATTCATATACT+AGG - tig0049447:458-477 Msa1466960:intergenic 20.0%
!! GTATATGAATATATGCATAA+TGG + tig0049447:459-478 Msa1466960:intron 20.0%
!!! AAATTAAGCTTTTTAGTTCT+TGG + tig0049447:551-570 Msa1466960:intron 20.0%
!! ATCTATCTAATTATAGGAAA+CGG + tig0049447:770-789 Msa1466960:intron 20.0%
! CTATCAAAGAAACAAGATTT+GGG - tig0049447:407-426 Msa1466960:intergenic 25.0%
!! CAAATCTTGTTTCTTTGATA+GGG + tig0049447:406-425 Msa1466960:CDS 25.0%
!!! TTTTAGTTCTTGGAATTGTA+AGG + tig0049447:561-580 Msa1466960:intron 25.0%
!!! TTTAGTTCTTGGAATTGTAA+GGG + tig0049447:562-581 Msa1466960:intron 25.0%
! TTACTATTTCAGAAATTCGA+AGG - tig0049447:602-621 Msa1466960:intergenic 25.0%
! TTCACTAAAGAGATATTTAG+AGG + tig0049447:673-692 Msa1466960:intron 25.0%
! TCACTAAAGAGATATTTAGA+GGG + tig0049447:674-693 Msa1466960:intron 25.0%
! ACCACTATCTATCTAATTAT+AGG + tig0049447:764-783 Msa1466960:intron 25.0%
! TCCTATAATTAGATAGATAG+TGG - tig0049447:768-787 Msa1466960:intergenic 25.0%
! TCTATCTAATTATAGGAAAC+GGG + tig0049447:771-790 Msa1466960:intron 25.0%
! TTGAAATCTCTATGAACAAT+AGG - tig0049447:890-909 Msa1466960:intergenic 25.0%
! ATTGGCATCTAAAAGAATAT+TGG - tig0049447:918-937 Msa1466960:intergenic 25.0%
CCTATCAAAGAAACAAGATT+TGG - tig0049447:408-427 Msa1466960:intergenic 30.0%
! CCAAATCTTGTTTCTTTGAT+AGG + tig0049447:405-424 Msa1466960:CDS 30.0%
! TTTGAGATCATGTAGATGTT+GGG - tig0049447:520-539 Msa1466960:intergenic 30.0%
!!! TTTTGAGATCATGTAGATGT+TGG - tig0049447:521-540 Msa1466960:intergenic 30.0%
TAAAGAGATATTTAGAGGGA+AGG + tig0049447:678-697 Msa1466960:intron 30.0%
GAAGAAGAAATCAGCATTAA+GGG - tig0049447:735-754 Msa1466960:intergenic 30.0%
AGAAGAAGAAATCAGCATTA+AGG - tig0049447:736-755 Msa1466960:intergenic 30.0%
CTATCTAATTATAGGAAACG+GGG + tig0049447:772-791 Msa1466960:intron 30.0%
TCAAAGAAACAAGATTTGGG+TGG - tig0049447:404-423 Msa1466960:intergenic 35.0%
AACCTGCAAGATCATTTGAA+TGG + tig0049447:483-502 Msa1466960:intron 35.0%
TACCATTCAAATGATCTTGC+AGG - tig0049447:488-507 Msa1466960:intergenic 35.0%
GGCATCTAAAAGAATATTGG+TGG - tig0049447:915-934 Msa1466960:intergenic 35.0%
AATGGAAATGCCTGCAATTG+AGG + tig0049447:332-351 Msa1466960:CDS 40.0%
ATGGAAATGCCTGCAATTGA+GGG + tig0049447:333-352 Msa1466960:CDS 40.0%
TAGAAGTTGACATGTTGAGC+AGG + tig0049447:373-392 Msa1466960:CDS 40.0%
!! TTGATAGGGTATTGTGCTGA+TGG + tig0049447:420-439 Msa1466960:intron 40.0%
!! TGATAGGGTATTGTGCTGAT+GGG + tig0049447:421-440 Msa1466960:intron 40.0%
ATCATGTAGATGTTGGGTAC+AGG - tig0049447:514-533 Msa1466960:intergenic 40.0%
AGGAAACGGGGAAAGAAAAA+TGG + tig0049447:784-803 Msa1466960:intron 40.0%
ACGGGGAAAGAAAAATGGAT+TGG + tig0049447:789-808 Msa1466960:intron 40.0%
! AATGCCACTCTTAGTCTTTG+AGG - tig0049447:815-834 Msa1466960:intergenic 40.0%
CAAAGACTAAGAGTGGCATT+AGG + tig0049447:815-834 Msa1466960:CDS 40.0%
TTCCAACACAAGAACTTGAG+TGG - tig0049447:865-884 Msa1466960:intergenic 40.0%
TTGGCCTCAAAGACTAAGAG+TGG + tig0049447:808-827 Msa1466960:CDS 45.0%
TGGCATTAGGAGCTGCAAAA+GGG + tig0049447:828-847 Msa1466960:CDS 45.0%
CTCCACTCAAGTTCTTGTGT+TGG + tig0049447:860-879 Msa1466960:CDS 45.0%
GTGGCATTAGGAGCTGCAAA+AGG + tig0049447:827-846 Msa1466960:CDS 50.0%
TCACGCTCTCCCTCAATTGC+AGG - tig0049447:345-364 Msa1466960:intergenic 55.0%
Chromosome Type Strat End Strand Name
tig0049447 gene 315 949 315 ID=Msa1466960;Name=Msa1466960
tig0049447 mRNA 315 949 315 ID=Msa1466960-mRNA-1;Parent=Msa1466960;Name=Msa1466960-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0|0|1|0|0|2|0|88
tig0049447 exon 315 427 315 ID=Msa1466960-mRNA-1:exon:25173;Parent=Msa1466960-mRNA-1
tig0049447 exon 799 949 799 ID=Msa1466960-mRNA-1:exon:25174;Parent=Msa1466960-mRNA-1
tig0049447 CDS 315 427 315 ID=Msa1466960-mRNA-1:cds;Parent=Msa1466960-mRNA-1
tig0049447 CDS 799 949 799 ID=Msa1466960-mRNA-1:cds;Parent=Msa1466960-mRNA-1
Gene Sequence

>Msa1466960

GTTGTAGCAATAAAGAAAATGGAAATGCCTGCAATTGAGGGAGAGCGTGAATTTCGTGTAGAAGTTGACATGTTGAGCAGGCTAGACCACCCAAATCTTGTTTCTTTGATAGGAAAAATGGATTGGCCTCAAAGACTAAGAGTGGCATTAGGAGCTGCAAAAGGGCTTGCTTATCTCCACTCAAGTTCTTGTGTTGGAATTCCTATTGTTCATAGAGATTTCAAATCCACCAATATTCTTTTAGATGCCAATTTTGAAGCAAAG
Protein sequence

>Msa1466960

VVAIKKMEMPAIEGEREFRVEVDMLSRLDHPNLVSLIGKMDWPQRLRVALGAAKGLAYLHSSSCVGIPIVHRDFKSTNILLDANFEAK